View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4086_low_26 (Length: 250)

Name: NF4086_low_26
Description: NF4086
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4086_low_26
NF4086_low_26
[»] chr1 (41 HSPs)
chr1 (23-238)||(16907130-16907345)
chr1 (68-238)||(20054115-20054285)
chr1 (68-238)||(20054571-20054741)
chr1 (68-238)||(20055027-20055197)
chr1 (68-238)||(20055483-20055653)
chr1 (68-238)||(20055939-20056109)
chr1 (68-238)||(20056395-20056565)
chr1 (68-238)||(20057298-20057468)
chr1 (68-238)||(20057754-20057924)
chr1 (68-238)||(20845696-20845866)
chr1 (159-240)||(38340938-38341019)
chr1 (65-238)||(43057558-43057731)
chr1 (138-238)||(2328326-2328426)
chr1 (138-238)||(35760949-35761049)
chr1 (99-238)||(20061226-20061367)
chr1 (81-238)||(50002742-50002899)
chr1 (138-238)||(35759643-35759743)
chr1 (138-238)||(30872985-30873085)
chr1 (68-238)||(2634865-2635035)
chr1 (68-234)||(12883465-12883631)
chr1 (163-238)||(20056851-20056926)
chr1 (176-238)||(50002320-50002382)
chr1 (177-238)||(46693770-46693831)
chr1 (148-238)||(12728012-12728103)
chr1 (163-238)||(43057100-43057175)
chr1 (162-237)||(51372910-51372985)
chr1 (163-238)||(52250242-52250317)
chr1 (176-238)||(16451968-16452030)
chr1 (176-238)||(16461121-16461183)
chr1 (109-238)||(31822698-31822827)
chr1 (182-238)||(20060375-20060431)
chr1 (172-238)||(50003110-50003176)
chr1 (176-237)||(10820641-10820702)
chr1 (178-238)||(23180781-23180841)
chr1 (64-238)||(2634403-2634577)
chr1 (68-145)||(67858-67935)
chr1 (163-234)||(7548127-7548198)
chr1 (158-234)||(46411173-46411249)
chr1 (174-237)||(16410759-16410822)
chr1 (176-234)||(16440618-16440676)
chr1 (196-238)||(31823119-31823161)
[»] chr8 (43 HSPs)
chr8 (68-237)||(6466652-6466820)
chr8 (99-238)||(25147506-25147647)
chr8 (68-238)||(22026320-22026490)
chr8 (68-238)||(22549030-22549200)
chr8 (63-238)||(28375089-28375264)
chr8 (68-238)||(10844824-10844994)
chr8 (68-238)||(22548584-22548754)
chr8 (68-238)||(27925840-27926010)
chr8 (159-238)||(41659140-41659219)
chr8 (81-230)||(1296962-1297110)
chr8 (138-234)||(2044069-2044165)
chr8 (138-234)||(6464949-6465045)
chr8 (138-238)||(17103092-17103192)
chr8 (163-238)||(27021914-27021989)
chr8 (160-238)||(10844650-10844728)
chr8 (163-237)||(27022374-27022448)
chr8 (160-238)||(41913003-41913081)
chr8 (165-238)||(34308514-34308587)
chr8 (138-238)||(22840564-22840664)
chr8 (151-238)||(30334943-30335030)
chr8 (68-234)||(8080381-8080547)
chr8 (160-238)||(27819281-27819359)
chr8 (153-238)||(33852293-33852378)
chr8 (162-238)||(12100726-12100802)
chr8 (178-238)||(12827289-12827349)
chr8 (159-238)||(25144804-25144883)
chr8 (159-238)||(28453370-28453449)
chr8 (159-238)||(32292429-32292508)
chr8 (163-237)||(22705208-22705282)
chr8 (159-235)||(21316147-21316223)
chr8 (165-238)||(34308970-34309047)
chr8 (180-234)||(25148020-25148074)
chr8 (81-238)||(15567591-15567748)
chr8 (165-234)||(36968434-36968503)
chr8 (172-240)||(17429545-17429613)
chr8 (163-238)||(3744674-3744749)
chr8 (178-237)||(15568041-15568100)
chr8 (138-237)||(28912886-28912985)
chr8 (68-238)||(6466198-6466368)
chr8 (176-238)||(15819050-15819112)
chr8 (176-238)||(3745150-3745212)
chr8 (163-224)||(29971450-29971511)
chr8 (205-238)||(31283686-31283719)
[»] chr4 (63 HSPs)
chr4 (68-238)||(8467829-8467998)
chr4 (68-238)||(50399022-50399192)
chr4 (68-238)||(12692028-12692198)
chr4 (68-238)||(50398567-50398737)
chr4 (68-238)||(1645778-1645948)
chr4 (44-237)||(27026414-27026613)
chr4 (81-238)||(21220360-21220517)
chr4 (159-238)||(9423887-9423966)
chr4 (172-238)||(44470903-44470969)
chr4 (162-238)||(44471354-44471430)
chr4 (63-238)||(1464083-1464258)
chr4 (163-238)||(23942818-23942893)
chr4 (68-231)||(29628703-29628866)
chr4 (101-238)||(49998608-49998747)
chr4 (68-238)||(3169147-3169317)
chr4 (172-238)||(23350312-23350378)
chr4 (68-238)||(24629462-24629632)
chr4 (177-238)||(4127918-4127979)
chr4 (163-238)||(14572179-14572254)
chr4 (176-238)||(7678651-7678713)
chr4 (68-238)||(14351736-14351906)
chr4 (172-238)||(31817881-31817947)
chr4 (112-238)||(51331310-51331436)
chr4 (163-238)||(4127466-4127541)
chr4 (163-238)||(14571750-14571825)
chr4 (159-230)||(21067766-21067837)
chr4 (68-238)||(24629006-24629179)
chr4 (176-238)||(17628560-17628622)
chr4 (63-238)||(23943271-23943442)
chr4 (99-234)||(35871598-35871735)
chr4 (186-237)||(20306191-20306242)
chr4 (159-238)||(21067314-21067393)
chr4 (100-238)||(15306120-15306265)
chr4 (88-238)||(27029239-27029388)
chr4 (176-238)||(53996144-53996206)
chr4 (110-238)||(41869900-41870029)
chr4 (159-238)||(31817427-31817506)
chr4 (159-237)||(13266118-13266196)
chr4 (151-237)||(42838647-42838733)
chr4 (68-237)||(17028815-17028984)
chr4 (173-238)||(23976248-23976313)
chr4 (193-238)||(50814854-50814899)
chr4 (178-238)||(27578486-27578546)
chr4 (159-234)||(17029362-17029437)
chr4 (159-238)||(43928992-43929071)
chr4 (81-238)||(4185668-4185826)
chr4 (192-238)||(13613926-13613972)
chr4 (176-238)||(33764909-33764971)
chr4 (162-240)||(52048693-52048771)
chr4 (68-169)||(33987169-33987270)
chr4 (73-216)||(53854858-53855001)
chr4 (160-226)||(17506418-17506484)
chr4 (101-238)||(17628941-17629079)
chr4 (188-238)||(23091540-23091590)
chr4 (163-224)||(27578952-27579013)
chr4 (181-234)||(34554483-34554536)
chr4 (165-230)||(53391925-53391990)
chr4 (158-234)||(24271583-24271659)
chr4 (202-238)||(39902482-39902518)
chr4 (176-234)||(45682252-45682310)
chr4 (91-212)||(17505895-17506016)
chr4 (109-234)||(26200318-26200446)
chr4 (138-214)||(2499647-2499723)
[»] chr6 (45 HSPs)
chr6 (81-237)||(32292838-32292995)
chr6 (99-238)||(13492759-13492900)
chr6 (63-238)||(20896723-20896898)
chr6 (68-238)||(20126217-20126387)
chr6 (152-238)||(21311996-21312082)
chr6 (99-238)||(16519939-16520079)
chr6 (68-238)||(6330947-6331117)
chr6 (68-238)||(20850262-20850432)
chr6 (121-238)||(13191548-13191665)
chr6 (151-238)||(11062309-11062396)
chr6 (159-238)||(17027566-17027645)
chr6 (159-238)||(27334193-27334272)
chr6 (159-238)||(27394933-27395012)
chr6 (68-238)||(3652427-3652597)
chr6 (99-238)||(9352033-9352173)
chr6 (99-234)||(9440348-9440484)
chr6 (68-238)||(23986352-23986522)
chr6 (159-238)||(7911910-7911989)
chr6 (163-230)||(14771762-14771829)
chr6 (172-238)||(2681251-2681317)
chr6 (159-229)||(2720608-2720678)
chr6 (122-238)||(20735690-20735806)
chr6 (159-234)||(7912342-7912417)
chr6 (159-238)||(17851406-17851485)
chr6 (176-238)||(15929631-15929693)
chr6 (163-237)||(31821728-31821802)
chr6 (162-230)||(17731156-17731224)
chr6 (159-238)||(2890874-2890953)
chr6 (163-238)||(23776477-23776552)
chr6 (161-238)||(1991587-1991664)
chr6 (164-237)||(17205376-17205449)
chr6 (159-234)||(9440896-9440971)
chr6 (159-238)||(17850950-17851029)
chr6 (188-238)||(13492393-13492443)
chr6 (172-238)||(21311560-21311626)
chr6 (167-237)||(28065874-28065944)
chr6 (159-216)||(9440485-9440542)
chr6 (112-238)||(12194315-12194439)
chr6 (177-235)||(28583013-28583071)
chr6 (175-229)||(33775048-33775102)
chr6 (162-234)||(20732613-20732685)
chr6 (68-199)||(3652920-3653051)
chr6 (163-234)||(15929235-15929306)
chr6 (166-237)||(3885123-3885194)
chr6 (162-224)||(10964339-10964401)
[»] chr7 (47 HSPs)
chr7 (68-238)||(2189085-2189255)
chr7 (151-238)||(2193280-2193367)
chr7 (138-237)||(25182372-25182471)
chr7 (109-238)||(42515526-42515655)
chr7 (68-238)||(6747633-6747803)
chr7 (111-238)||(2941792-2941920)
chr7 (160-238)||(13125171-13125249)
chr7 (99-238)||(9124929-9125070)
chr7 (109-238)||(46425723-46425852)
chr7 (138-238)||(6719109-6719209)
chr7 (138-234)||(42515103-42515199)
chr7 (152-227)||(26957603-26957678)
chr7 (99-236)||(11517426-11517564)
chr7 (159-238)||(29357491-29357570)
chr7 (163-238)||(36422288-36422363)
chr7 (176-238)||(2465782-2465844)
chr7 (162-238)||(18833321-18833397)
chr7 (178-234)||(35527160-35527216)
chr7 (163-238)||(2465960-2466035)
chr7 (163-238)||(28495890-28495965)
chr7 (163-238)||(34405626-34405701)
chr7 (159-237)||(5406624-5406702)
chr7 (68-237)||(43233354-43233523)
chr7 (163-238)||(2611687-2611762)
chr7 (163-234)||(11372487-11372558)
chr7 (167-238)||(31743859-31743930)
chr7 (163-238)||(35474156-35474231)
chr7 (159-238)||(36015446-36015525)
chr7 (176-238)||(22529270-22529332)
chr7 (176-238)||(29039055-29039117)
chr7 (159-227)||(6585640-6585708)
chr7 (159-238)||(26421795-26421874)
chr7 (127-238)||(31406619-31406730)
chr7 (176-234)||(679866-679923)
chr7 (159-217)||(13124757-13124815)
chr7 (176-238)||(16192368-16192430)
chr7 (68-224)||(2489979-2490136)
chr7 (177-234)||(26421344-26421401)
chr7 (163-238)||(28495643-28495718)
chr7 (159-238)||(37672192-37672271)
chr7 (192-238)||(9623273-9623319)
chr7 (81-231)||(33316681-33316832)
chr7 (174-238)||(1628763-1628824)
chr7 (163-219)||(16811900-16811956)
chr7 (163-231)||(20966087-20966155)
chr7 (63-211)||(3305374-3305522)
chr7 (163-231)||(11372935-11373003)
[»] chr5 (41 HSPs)
chr5 (70-238)||(34867733-34867901)
chr5 (159-238)||(1821938-1822017)
chr5 (63-238)||(21886181-21886356)
chr5 (65-234)||(20039513-20039682)
chr5 (159-238)||(8642069-8642148)
chr5 (163-238)||(10927438-10927513)
chr5 (159-238)||(22556568-22556647)
chr5 (162-238)||(2473994-2474070)
chr5 (122-238)||(10926981-10927097)
chr5 (122-238)||(17445490-17445606)
chr5 (159-238)||(22557001-22557080)
chr5 (172-238)||(189113-189179)
chr5 (176-238)||(42788681-42788743)
chr5 (163-238)||(2193852-2193927)
chr5 (172-238)||(2474450-2474516)
chr5 (176-238)||(27646870-27646932)
chr5 (172-238)||(34371657-34371723)
chr5 (162-238)||(3887092-3887168)
chr5 (159-238)||(18750231-18750310)
chr5 (172-238)||(3886636-3886702)
chr5 (176-238)||(34372117-34372179)
chr5 (68-238)||(4658028-4658197)
chr5 (160-233)||(2058696-2058769)
chr5 (121-238)||(8391357-8391473)
chr5 (177-238)||(24182280-24182341)
chr5 (121-238)||(30719840-30719957)
chr5 (163-234)||(11160720-11160791)
chr5 (163-238)||(16370743-16370818)
chr5 (71-238)||(39146883-39147050)
chr5 (68-234)||(5066930-5067095)
chr5 (163-237)||(32574694-32574767)
chr5 (71-234)||(18304375-18304538)
chr5 (81-215)||(4102767-4102895)
chr5 (176-234)||(42429194-42429252)
chr5 (121-238)||(30684591-30684708)
chr5 (157-238)||(15513047-15513129)
chr5 (158-237)||(39801498-39801578)
chr5 (68-238)||(43356655-43356824)
chr5 (188-238)||(20858576-20858626)
chr5 (101-207)||(22975076-22975184)
chr5 (171-234)||(4673510-4673573)
[»] scaffold0499 (1 HSPs)
scaffold0499 (159-238)||(2086-2165)
[»] chr2 (38 HSPs)
chr2 (68-238)||(33174899-33175069)
chr2 (159-238)||(41754321-41754400)
chr2 (162-238)||(30966269-30966345)
chr2 (151-238)||(1707065-1707152)
chr2 (159-238)||(25338032-25338111)
chr2 (138-238)||(18098913-18099013)
chr2 (159-238)||(1953187-1953266)
chr2 (159-238)||(16379425-16379504)
chr2 (172-238)||(30966735-30966801)
chr2 (100-237)||(82991-83127)
chr2 (138-238)||(16378948-16379048)
chr2 (87-238)||(33174465-33174614)
chr2 (163-238)||(1912561-1912636)
chr2 (163-238)||(8256562-8256637)
chr2 (138-237)||(24818337-24818436)
chr2 (163-238)||(33771037-33771112)
chr2 (72-236)||(25434093-25434257)
chr2 (138-238)||(29259655-29259755)
chr2 (159-238)||(15619930-15620009)
chr2 (163-238)||(29804718-29804793)
chr2 (174-237)||(30963299-30963362)
chr2 (159-237)||(20502055-20502133)
chr2 (68-238)||(27882961-27883131)
chr2 (189-238)||(5399852-5399901)
chr2 (163-238)||(11388224-11388298)
chr2 (163-238)||(11394571-11394645)
chr2 (163-238)||(13191010-13191085)
chr2 (159-238)||(30963755-30963834)
chr2 (163-234)||(38898951-38899022)
chr2 (157-237)||(16542015-16542095)
chr2 (179-238)||(8073944-8074003)
chr2 (163-237)||(18447954-18448028)
chr2 (178-230)||(8181394-8181446)
chr2 (178-238)||(36924457-36924519)
chr2 (174-238)||(15639781-15639845)
chr2 (187-234)||(30961922-30961969)
chr2 (187-238)||(26864851-26864902)
chr2 (81-220)||(37552521-37552660)
[»] scaffold0088 (1 HSPs)
scaffold0088 (159-238)||(23705-23784)
[»] chr3 (46 HSPs)
chr3 (159-238)||(28561778-28561857)
chr3 (159-238)||(31284311-31284390)
chr3 (88-238)||(32796970-32797120)
chr3 (159-238)||(7493913-7493992)
chr3 (63-238)||(39640873-39641048)
chr3 (138-238)||(30529698-30529798)
chr3 (159-238)||(7477223-7477302)
chr3 (159-238)||(32386769-32386848)
chr3 (68-238)||(39653105-39653275)
chr3 (138-238)||(25248122-25248222)
chr3 (138-238)||(27187365-27187465)
chr3 (162-238)||(41472336-41472411)
chr3 (163-238)||(11180069-11180144)
chr3 (163-238)||(14813985-14814060)
chr3 (163-234)||(25230744-25230815)
chr3 (163-234)||(25238331-25238402)
chr3 (176-238)||(13150589-13150651)
chr3 (68-238)||(16811322-16811492)
chr3 (165-238)||(50347784-50347857)
chr3 (166-238)||(29224363-29224435)
chr3 (163-238)||(13150134-13150209)
chr3 (163-238)||(20885152-20885227)
chr3 (163-238)||(25230283-25230358)
chr3 (163-238)||(25237870-25237945)
chr3 (163-238)||(25802583-25802658)
chr3 (163-238)||(32227256-32227331)
chr3 (163-238)||(32227536-32227611)
chr3 (159-237)||(8067312-8067390)
chr3 (177-238)||(25239112-25239173)
chr3 (179-238)||(4067395-4067454)
chr3 (167-238)||(25238719-25238790)
chr3 (187-237)||(14820214-14820264)
chr3 (68-234)||(2911036-2911202)
chr3 (172-238)||(16810970-16811036)
chr3 (182-238)||(37045090-37045146)
chr3 (163-238)||(25803039-25803114)
chr3 (162-234)||(31103999-31104071)
chr3 (162-230)||(41474032-41474100)
chr3 (195-237)||(3890046-3890088)
chr3 (195-237)||(3899868-3899910)
chr3 (162-234)||(47518358-47518430)
chr3 (185-232)||(15392568-15392615)
chr3 (185-232)||(15405604-15405651)
chr3 (185-232)||(15411013-15411060)
chr3 (185-232)||(15417429-15417476)
chr3 (174-238)||(26310024-26310088)
[»] scaffold0024 (1 HSPs)
scaffold0024 (111-238)||(105703-105831)
[»] scaffold0322 (1 HSPs)
scaffold0322 (159-238)||(18998-19077)
[»] scaffold0040 (1 HSPs)
scaffold0040 (159-238)||(2245-2324)
[»] scaffold0243 (1 HSPs)
scaffold0243 (160-238)||(1253-1331)
[»] scaffold0020 (1 HSPs)
scaffold0020 (138-238)||(107498-107598)
[»] scaffold0333 (2 HSPs)
scaffold0333 (160-238)||(4594-4672)
scaffold0333 (160-238)||(5049-5132)
[»] scaffold0022 (2 HSPs)
scaffold0022 (133-237)||(69851-69955)
scaffold0022 (162-238)||(162713-162789)
[»] scaffold0007 (1 HSPs)
scaffold0007 (138-238)||(142309-142409)
[»] scaffold0664 (1 HSPs)
scaffold0664 (159-238)||(4017-4096)
[»] scaffold0168 (1 HSPs)
scaffold0168 (127-234)||(2742-2849)
[»] scaffold0018 (1 HSPs)
scaffold0018 (138-237)||(10311-10410)
[»] scaffold0005 (2 HSPs)
scaffold0005 (163-238)||(245122-245197)
scaffold0005 (163-238)||(245551-245626)
[»] scaffold0557 (1 HSPs)
scaffold0557 (171-238)||(2149-2216)
[»] scaffold0002 (1 HSPs)
scaffold0002 (163-238)||(154793-154868)
[»] scaffold0047 (2 HSPs)
scaffold0047 (133-238)||(17633-17738)
scaffold0047 (138-237)||(18170-18269)
[»] scaffold0101 (1 HSPs)
scaffold0101 (180-240)||(45439-45499)
[»] scaffold0391 (1 HSPs)
scaffold0391 (180-235)||(14794-14849)
[»] scaffold0036 (2 HSPs)
scaffold0036 (81-238)||(26023-26181)
scaffold0036 (163-237)||(16072-16146)
[»] scaffold1126 (1 HSPs)
scaffold1126 (152-208)||(981-1037)
[»] scaffold0071 (1 HSPs)
scaffold0071 (185-232)||(44762-44809)


Alignment Details
Target: chr1 (Bit Score: 192; Significance: 1e-104; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 23 - 238
Target Start/End: Original strand, 16907130 - 16907345
Alignment:
Q  23 cgtcaatattgtatttcatcctgtaacgcccgaggctaacgagaatggtcgccagtgtacaagacatgacaatcagcggctcttggcagcttctaggcaa 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  16907130 cgtcaatattgtatttcatcctgtaacgcccgaggctaacgagaatggtcgccagtgcacaagacatgacaatcagcggctcctggcagcttctaggcaa 16907229  T
Q  123 accaaatcatatcaaaatgagagaaattctgagactgtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatc 222  Q
    |||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16907230 accaaatcatatcaaaatgagagggattttgagactgtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatc 16907329  T
Q  223 aacaagatgcatcttc 238  Q
    |||||||| |||||||    
T  16907330 aacaagatacatcttc 16907345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 68 - 238
Target Start/End: Complemental strand, 20054285 - 20054115
Alignment:
Q  68 tggtcgccagtgtacaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggta 167  Q
    |||||||| ||| ||||| || |||||| |||||||| || ||||||||||   |||| ||||| | |  ||||||||   | ||||| | |||||||||    
T  20054285 tggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaatcacaccggaatgagagggttcctgaggccgtgcaggta 20054186  T
Q  168 tgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20054185 tgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 20054115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 68 - 238
Target Start/End: Complemental strand, 20054741 - 20054571
Alignment:
Q  68 tggtcgccagtgtacaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggta 167  Q
    |||||||| ||| ||||| || |||||| |||||||| || ||||||||||   |||| ||||| | |  ||||||||   | ||||| | |||||||||    
T  20054741 tggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaatcacaccggaatgagagggttcctgaggccgtgcaggta 20054642  T
Q  168 tgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20054641 tgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 20054571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 68 - 238
Target Start/End: Complemental strand, 20055197 - 20055027
Alignment:
Q  68 tggtcgccagtgtacaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggta 167  Q
    |||||||| ||| ||||| || |||||| |||||||| || ||||||||||   |||| ||||| | |  ||||||||   | ||||| | |||||||||    
T  20055197 tggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaatcacaccggaatgagagggttcctgaggccgtgcaggta 20055098  T
Q  168 tgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20055097 tgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 20055027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 68 - 238
Target Start/End: Complemental strand, 20055653 - 20055483
Alignment:
Q  68 tggtcgccagtgtacaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggta 167  Q
    |||||||| ||| ||||| || |||||| |||||||| || ||||||||||   |||| ||||| | |  ||||||||   | ||||| | |||||||||    
T  20055653 tggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaatcacaccggaatgagagggttcctgaggccgtgcaggta 20055554  T
Q  168 tgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20055553 tgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 20055483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 68 - 238
Target Start/End: Complemental strand, 20056109 - 20055939
Alignment:
Q  68 tggtcgccagtgtacaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggta 167  Q
    |||||||| ||| ||||| || |||||| |||||||| || ||||||||||   |||| ||||| | |  ||||||||   | ||||| | |||||||||    
T  20056109 tggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaatcacaccggaatgagagggttcctgaggccgtgcaggta 20056010  T
Q  168 tgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20056009 tgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 20055939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 68 - 238
Target Start/End: Complemental strand, 20056565 - 20056395
Alignment:
Q  68 tggtcgccagtgtacaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggta 167  Q
    |||||||| ||| ||||| || |||||| |||||||| || ||||||||||   |||| ||||| | |  ||||||||   | ||||| | |||||||||    
T  20056565 tggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaatcacaccggaatgagagggttcctgaggccgtgcaggta 20056466  T
Q  168 tgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20056465 tgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 20056395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 68 - 238
Target Start/End: Complemental strand, 20057468 - 20057298
Alignment:
Q  68 tggtcgccagtgtacaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggta 167  Q
    |||||||| ||| ||||| || |||||| |||||||| || ||||||||||   |||| ||||| | |  ||||||||   | ||||| | |||||||||    
T  20057468 tggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaatcacaccggaatgagagggttcctgaggccgtgcaggta 20057369  T
Q  168 tgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20057368 tgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 20057298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 68 - 238
Target Start/End: Complemental strand, 20057924 - 20057754
Alignment:
Q  68 tggtcgccagtgtacaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggta 167  Q
    |||||||| ||| ||||| || |||||| |||||||| |  ||||||||||   |||  ||||| | | |||||||||   | ||||| | |||||||||    
T  20057924 tggtcgccggtgcacaaggcacgacaatgagcggctcctaacagcttctagaggaactgaatcacaccgaaatgagagggttcctgaggccgtgcaggta 20057825  T
Q  168 tgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20057824 tgggactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 20057754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 68 - 238
Target Start/End: Complemental strand, 20845866 - 20845696
Alignment:
Q  68 tggtcgccagtgtacaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggta 167  Q
    |||||||| ||| ||||| || |||||| |||||||| || ||||||||||   |||| ||||| | |  |||||||    | ||||| | |||||||||    
T  20845866 tggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaatcacaccggaatgagacggttcctgaggccgtgcaggta 20845767  T
Q  168 tgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||| |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  20845766 tgagactgcatggttgaaggaaggcttataagaattgtttgttactacctatatcaacaagatgcatcttc 20845696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 38340938 - 38341019
Alignment:
Q  159 gtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcat 240  Q
    |||||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38340938 gtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcat 38341019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 65 - 238
Target Start/End: Complemental strand, 43057731 - 43057558
Alignment:
Q  65 gaatggtcgccagtgtacaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgcag 164  Q
    ||||||||||| ||| ||||| |||| |||| ||||||||  | |||||| |||   |||| ||||| |||  ||||||||  || ||||| | ||| ||    
T  43057731 gaatggtcgccggtgcacaaggcatgccaatgagcggctcccgacagcttttagaggaaccgaatcacatcggaatgagagggatcctgaggccgtgtag 43057632  T
Q  165 gtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  43057631 gtatgagactacatggttgaaggaaggcttataagaattgtttggtactacctatattaacaagatgcatcttc 43057558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 138 - 238
Target Start/End: Original strand, 2328326 - 2328426
Alignment:
Q  138 aatgagagaaattctgagactgtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatctt 237  Q
    ||||||||||||| |||| | || ||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  2328326 aatgagagaaattatgaggccgtacaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatattaacaagatgcatctt 2328425  T
Q  238 c 238  Q
    |    
T  2328426 c 2328426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 138 - 238
Target Start/End: Complemental strand, 35761049 - 35760949
Alignment:
Q  138 aatgagagaaattctgagactgtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatctt 237  Q
    ||||||||  || ||||| | |||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  35761049 aatgagagggatcctgaggccgtgcaggtatgagactgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatctt 35760950  T
Q  238 c 238  Q
    |    
T  35760949 c 35760949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 99 - 238
Target Start/End: Complemental strand, 20061367 - 20061226
Alignment:
Q  99 cggctcttggcag-cttctaggc-aaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggtatgaaactgcatggttgaaagaaggcttat 196  Q
    ||||||||||||  ||||||||| ||||  ||||| |||| ||||||||  || |||||   |||||||||||  |||||||||||||| ||| ||||||    
T  20061367 cggctcttggcaatcttctaggctaaactgaatcacatcagaatgagagggatcctgaggtcgtgcaggtatgggactgcatggttgaaggaaagcttat 20061268  T
Q  197 aagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  20061267 aagaattgtttggtactacctatatcaacaagatgcatcttc 20061226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 81 - 238
Target Start/End: Complemental strand, 50002899 - 50002742
Alignment:
Q  81 acaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggtatgaaactgcatgg 180  Q
    ||||| ||||||||| ||||||||  | || |||||||   | || ||||| |||  ||||||||| || ||||| | ||| ||| |||  |||||||||    
T  50002899 acaaggcatgacaatgagcggctcccgacatcttctagaggagccgaatcacatcggaatgagagagatcctgaggccgtgtaggcatgggactgcatgg 50002800  T
Q  181 ttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50002799 ttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 50002742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 138 - 238
Target Start/End: Complemental strand, 35759743 - 35759643
Alignment:
Q  138 aatgagagaaattctgagactgtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatctt 237  Q
    ||||||||  || ||||| | |||||||||||  |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  35759743 aatgagagggatcctgaggccgtgcaggtatgggactgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatctt 35759644  T
Q  238 c 238  Q
    |    
T  35759643 c 35759643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 138 - 238
Target Start/End: Complemental strand, 30873085 - 30872985
Alignment:
Q  138 aatgagagaaattctgagactgtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatctt 237  Q
    ||||||||  |||||||| | |||||||||||| |||| ||||||||| |||| ||| ||||||||||||| ||||||||||||||||||||||||||||    
T  30873085 aatgagagggattctgaggccgtgcaggtatgagactgtatggttgaaggaagacttttaagaattgtttgatactacctatatcaacaagatgcatctt 30872986  T
Q  238 c 238  Q
    |    
T  30872985 c 30872985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 68 - 238
Target Start/End: Original strand, 2634865 - 2635035
Alignment:
Q  68 tggtcgccagtgtacaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggta 167  Q
    |||||||| ||| ||||| |||||||||  | ||||| | ||| |||||||||||| | ||||| |||  ||||||||  ||  ||||  ||||||||||    
T  2634865 tggtcgccggtgcacaaggcatgacaatgtgtggctcctagcaacttctaggcaaatcgaatcacatcggaatgagagggatcatgaggttgtgcaggta 2634964  T
Q  168 tgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||  |||||||||||||| ||   || |||||||||||||||||||||||||| |||||||||||||||||    
T  2634965 tgggactgcatggttgaaggataactcataagaattgtttggtactacctataccaacaagatgcatcttc 2635035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 68 - 234
Target Start/End: Original strand, 12883465 - 12883631
Alignment:
Q  68 tggtcgccagtgtacaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggta 167  Q
    |||||| | ||| ||||| || |||||| ||||||||| | |||||||||| | |||| ||||| | |  |||||||   || | ||| |||||||||||    
T  12883465 tggtcgtcggtgcacaaggcacgacaatgagcggctctcgacagcttctagacgaaccgaatcacaccggaatgagatggatcccgaggctgtgcaggta 12883564  T
Q  168 tgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcat 234  Q
    ||  |||||||| ||||| |||  |||||||||||||||||||||||||||||||||||||||||||    
T  12883565 tgggactgcatgattgaaggaatacttataagaattgtttggtactacctatatcaacaagatgcat 12883631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 163 - 238
Target Start/End: Complemental strand, 20056926 - 20056851
Alignment:
Q  163 aggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||  |||||| ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  20056926 aggtatgggactgcagggttgaaggaaggcttatgagaattgtttggtactacctatatcaacaagatgcatcttc 20056851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 176 - 238
Target Start/End: Complemental strand, 50002382 - 50002320
Alignment:
Q  176 catggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  50002382 catggttgaaggaaggcttataagaattgtttggtactacctttatcaacaagatgcatcttc 50002320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 177 - 238
Target Start/End: Complemental strand, 46693831 - 46693770
Alignment:
Q  177 atggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  46693831 atggttgaaggaaggcttataaaaattgtttggtactacctatatcaacaagatgcatcttc 46693770  T

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Target: chr1; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 148 - 238
Target Start/End: Original strand, 12728012 - 12728103
Alignment:
Q  148 attctgagactgtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttgg-tactacctatatcaacaagatgcatcttc 238  Q
    |||||||||||||| |||||||  ||  |||||||||| |||| |||||||||||||||||| |||| ||||||||||||||||||||||||    
T  12728012 attctgagactgtgtaggtatgggacaacatggttgaaggaagacttataagaattgtttggttactgcctatatcaacaagatgcatcttc 12728103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 163 - 238
Target Start/End: Complemental strand, 43057175 - 43057100
Alignment:
Q  163 aggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||  ||| |||||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  43057175 aggtatgtgactacatggttgaaggaaggcttagaagaattgtttgatactacctatatcaacaagatgcatcttc 43057100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 162 - 237
Target Start/End: Complemental strand, 51372985 - 51372910
Alignment:
Q  162 caggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatctt 237  Q
    ||||||||  |||| ||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  51372985 caggtatgtgactgtatggttgaaggaaggcttataagaattgtttagtactacctatatcgacaagatgcatctt 51372910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 163 - 238
Target Start/End: Original strand, 52250242 - 52250317
Alignment:
Q  163 aggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||  ||| |||||| ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  52250242 aggtatgggactacatggtcgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttc 52250317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 176 - 238
Target Start/End: Complemental strand, 16452030 - 16451968
Alignment:
Q  176 catggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  16452030 catggttgaaggaaagcttataagaattgttgggtactacctatatcaacaagatgcatcttc 16451968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 176 - 238
Target Start/End: Complemental strand, 16461183 - 16461121
Alignment:
Q  176 catggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  16461183 catggttgaaggaaagcttataagaattgttgggtactacctatatcaacaagatgcatcttc 16461121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 109 - 238
Target Start/End: Complemental strand, 31822827 - 31822698
Alignment:
Q  109 cagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttg 208  Q
    ||||||||||   |||||||||| |||| ||||||||  ||  |||| | ||| |||||||| ||| |||||||||| ||||  ||||||||||| ||||    
T  31822827 cagcttctagagcaaccaaatcacatcagaatgagagggatcatgaggccgtgtaggtatgagactacatggttgaaggaagatttataagaattatttg 31822728  T
Q  209 gtactacctatatcaacaagatgcatcttc 238  Q
    ||||||| ||||||||||| ||||||||||    
T  31822727 gtactacatatatcaacaatatgcatcttc 31822698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 20060431 - 20060375
Alignment:
Q  182 tgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  20060431 tgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttc 20060375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 172 - 238
Target Start/End: Complemental strand, 50003176 - 50003110
Alignment:
Q  172 actgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||||||||||| || | || ||||||| ||||||| |||||||||||||||||||||||||||||||    
T  50003176 actgcatggttaaagggagacttataataattgttgggtactacctatatcaacaagatgcatcttc 50003110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 237
Target Start/End: Original strand, 10820641 - 10820702
Alignment:
Q  176 catggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatctt 237  Q
    |||||||||| ||||  |||||||||||||||||||||||||||||||| ||||| ||||||    
T  10820641 catggttgaaggaagatttataagaattgtttggtactacctatatcaataagatacatctt 10820702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 23180781 - 23180841
Alignment:
Q  178 tggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||| ||| | |||||||||||| |||||||||||||||||||||||||| ||||||    
T  23180781 tggttgaaggaatgattataagaattgcttggtactacctatatcaacaagatgtatcttc 23180841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 64 - 238
Target Start/End: Original strand, 2634403 - 2634577
Alignment:
Q  64 agaatggtcgccagtgtacaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaa-attctgagactgtgc 162  Q
    ||||||||||||||||  |||| ||||| |||  ||  ||| ||| |||||||||| ||||| ||||| ||| |||||||||   || |||||  ||||     
T  2634403 agaatggtcgccagtgcgcaaggcatgataatatgca-ctcatggaagcttctaggaaaaccgaatcacatcgaaatgagaggggatcctgaggttgtgt 2634501  T
Q  163 aggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    | |||||| | |||||| || || ||||||||  |||||||||||||||||| |||||  ||||||||||||||||    
T  2634502 atgtatgagattgcatgattaaaggaaggcttgcaagaattgtttggtactagctatacaaacaagatgcatcttc 2634577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 145
Target Start/End: Complemental strand, 67935 - 67858
Alignment:
Q  68 tggtcgccagtgtacaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagag 145  Q
    |||||||| ||||||||||||||||||| |||| || |||| |||||||||| ||| ||||||| |||  ||||||||    
T  67935 tggtcgccggtgtacaagacatgacaatgagcgacttttggtagcttctaggaaaatcaaatcacatcggaatgagag 67858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 234
Target Start/End: Original strand, 7548127 - 7548198
Alignment:
Q  163 aggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcat 234  Q
    |||||||| ||| |||| || || |||| ||||||| |||||||||||| || |||||||||||||||||||    
T  7548127 aggtatgagactacatgattaaaggaagacttataaaaattgtttggtattaactatatcaacaagatgcat 7548198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 234
Target Start/End: Complemental strand, 46411249 - 46411173
Alignment:
Q  158 tgtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcat 234  Q
    |||||| |||||||| |||| |||||||  ||   || |||||||| |||||||||||||||||||| |||||||||    
T  46411249 tgtgcatgtatgaaattgcacggttgaagaaaaatttttaagaattatttggtactacctatatcaataagatgcat 46411173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 237
Target Start/End: Complemental strand, 16410822 - 16410759
Alignment:
Q  174 tgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatctt 237  Q
    ||||| |||||| ||| ||||||||||||| |||  ||||||| ||| ||||||||||||||||    
T  16410822 tgcattgttgaaggaaagcttataagaattatttactactaccaataccaacaagatgcatctt 16410759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 234
Target Start/End: Complemental strand, 16440676 - 16440618
Alignment:
Q  176 catggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcat 234  Q
    ||||||||||  ||| |||||||||| |||||| ||||||| ||| |||||||||||||    
T  16440676 catggttgaagaaagacttataagaactgtttgctactaccgataacaacaagatgcat 16440618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 238
Target Start/End: Complemental strand, 31823161 - 31823119
Alignment:
Q  196 taagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||| |||||||||||||||||||| || ||||||||||    
T  31823161 taagaattatttggtactacctatatcaataaaatgcatcttc 31823119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 94; Significance: 5e-46; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 68 - 237
Target Start/End: Original strand, 6466652 - 6466820
Alignment:
Q  68 tggtcgccagtgtacaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggta 167  Q
    |||| ||||||| ||||| ||||||||| ||| |||| || ||||||| |||||||||||||||||||| ||||||||  ||||||||||||||| ||||    
T  6466652 tggttgccagtgcacaaggcatgacaatgagcagctcctgacagcttccaggcaaaccaaatcatatcagaatgagagggattctgagactgtgcgggta 6466751  T
Q  168 tgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatctt 237  Q
    || |||||||||||| |||| || ||||||| ||||||||||||||||||||| ||||||||||||||||    
T  6466752 tggaactgcatggtt-aaaggagacttataaaaattgtttggtactacctataccaacaagatgcatctt 6466820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 99 - 238
Target Start/End: Original strand, 25147506 - 25147647
Alignment:
Q  99 cggctcttggca-gcttctaggcaaacc-aaatcatatcaaaatgagagaaattctgagactgtgcaggtatgaaactgcatggttgaaagaaggcttat 196  Q
    |||||||||||| ||||||||||||| | |||||| |||  ||||||||| || || |||||||| |||||||| |||||||||||||| ||||||||||    
T  25147506 cggctcttggcatgcttctaggcaaaactaaatcacatcggaatgagagagatcctaagactgtgtaggtatgagactgcatggttgaaggaaggcttat 25147605  T
Q  197 aagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  25147606 aagaattgtttggtgctacctatatcaacaagatgcatcttc 25147647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 68 - 238
Target Start/End: Original strand, 22026320 - 22026490
Alignment:
Q  68 tggtcgccagtgtacaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggta 167  Q
    |||||||| ||| ||||| ||||||||| |||||||| || ||||||||||   |||| ||||| | |  ||||||||   |  |||| | |||||||||    
T  22026320 tggtcgccggtgcacaaggcatgacaatgagcggctcctgacagcttctagaggaaccgaatcacaccggaatgagagggttcgtgaggccgtgcaggta 22026419  T
Q  168 tgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22026420 tgggactgcatggttgaatgaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 22026490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 68 - 238
Target Start/End: Complemental strand, 22549200 - 22549030
Alignment:
Q  68 tggtcgccagtgtacaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggta 167  Q
    |||||||| ||| ||||| || |||||| |||||||| || ||||||||||   |||| ||||| | |  ||||||||   | ||||| |||||||||||    
T  22549200 tggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaatcacaccggaatgagaggcttcctgaggctgtgcaggta 22549101  T
Q  168 tgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||  |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  22549100 tgtgactgcatggttgaaggaagacttataagaattgtttggtactacctatatcaacaagatgcatcttc 22549030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 63 - 238
Target Start/End: Complemental strand, 28375264 - 28375089
Alignment:
Q  63 gagaatggtcgccagtgtacaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgc 162  Q
    |||| |||||| | ||| ||||| || |||||| ||||||||  | |||||||||| | || | ||||| | || ||||||||  || ||||| | ||||    
T  28375264 gagagtggtcgtcggtgcacaaggcacgacaattagcggctcccgacagcttctagacgaaacgaatcacaccataatgagagggatcctgaggccgtgc 28375165  T
Q  163 aggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||| |||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  28375164 aggtatgagactgcatgattgaaggaaggcttataagaattgtttggtactacctacatcaacaagatgcatcttc 28375089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 68 - 238
Target Start/End: Original strand, 10844824 - 10844994
Alignment:
Q  68 tggtcgccagtgtacaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggta 167  Q
    |||||||| ||| ||||| || |||||| |||||||| || ||||||||||   |||| ||||| | |  ||||||||   | ||||| | |||||||||    
T  10844824 tggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaatcacaccggaatgagagggttcctgaggccgtgcaggta 10844923  T
Q  168 tgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||  |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10844924 tgggactgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttc 10844994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 68 - 238
Target Start/End: Complemental strand, 22548754 - 22548584
Alignment:
Q  68 tggtcgccagtgtacaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggta 167  Q
    |||||||||||| ||||| ||  ||||| |||||||| || ||||||||||   |||| ||||| | |  ||||||||   | ||||| |||||||||||    
T  22548754 tggtcgccagtgcacaaggcactacaatgagcggctcctgacagcttctagaggaacctaatcacaccggaatgagagggttcctgaggctgtgcaggta 22548655  T
Q  168 tgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||  |||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  22548654 tgtgactgcatggttgaaggaagttttataagaattgtttggtactacctatatcaacaagatgcatcttc 22548584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 68 - 238
Target Start/End: Original strand, 27925840 - 27926010
Alignment:
Q  68 tggtcgccagtgtacaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggta 167  Q
    |||||||  ||| ||||| || |||||| |||||||| || ||||||||||   |||| ||||| | |  ||||||||   | ||||| | |||||||||    
T  27925840 tggtcgctggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaatcacaccggaatgagagggttcctgaggccgtgcaggta 27925939  T
Q  168 tgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||  |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  27925940 tgggactgcatggttgaaggaaggattataagaattgtttggtactacctatatcaacaagatgcatcttc 27926010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 159 - 238
Target Start/End: Complemental strand, 41659219 - 41659140
Alignment:
Q  159 gtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||||||  |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  41659219 gtgcaggtatgggactgcatggttgaaggaagacttataagaattgtttggtactacctatatcaacaagatgcatcttc 41659140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 81 - 230
Target Start/End: Original strand, 1296962 - 1297110
Alignment:
Q  81 acaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggtatgaaactgcatgg 180  Q
    |||||||||||||||  ||||||| |  ||||||||| |||| |||||||| |||||| ||||||   ||||||||   ||||||||||| |||||||||    
T  1296962 acaagacatgacaatgcgcggctcataacagcttctaagcaa-ccaaatcacatcaaagtgagaggggttctgagatcatgcaggtatgagactgcatgg 1297060  T
Q  181 ttgaaagaaggcttataagaattgtttggtactacctatatcaacaagat 230  Q
    |||||  ||  ||||||||||||||||||||||||||||| |||||||||    
T  1297061 ttgaagtaaaacttataagaattgtttggtactacctataccaacaagat 1297110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 138 - 234
Target Start/End: Original strand, 2044069 - 2044165
Alignment:
Q  138 aatgagagaaattctgagactgtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcat 234  Q
    ||||||||  || ||||| ||||| |||||||| ||| |||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||    
T  2044069 aatgagagggatcctgaggctgtgtaggtatgagactacatggttgaaggaaggcttataagaattgtttgatactacctatatcaacaagatgcat 2044165  T

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Target: chr8; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 138 - 234
Target Start/End: Complemental strand, 6465045 - 6464949
Alignment:
Q  138 aatgagagaaattctgagactgtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcat 234  Q
    |||||||| |||  |||| | ||| ||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  6465045 aatgagaggaatcatgaggccgtgtaggtatggaactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcat 6464949  T

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Target: chr8; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 138 - 238
Target Start/End: Original strand, 17103092 - 17103192
Alignment:
Q  138 aatgagagaaattctgagactgtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatctt 237  Q
    ||||||||| || ||||| | || ||||||||| |||||||||||||| |||| |||||||||||||||||||||| |||||||||||||| ||||||||    
T  17103092 aatgagagagatcctgaggccgtacaggtatgagactgcatggttgaaggaagacttataagaattgtttggtactgcctatatcaacaagctgcatctt 17103191  T
Q  238 c 238  Q
    |    
T  17103192 c 17103192  T

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Target: chr8; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 163 - 238
Target Start/End: Complemental strand, 27021989 - 27021914
Alignment:
Q  163 aggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||| | |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  27021989 aggtataagactgcatggttgaaggaaggcttataagaattgtttggtactacttatatcaacaagatgcatcttc 27021914  T

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Target: chr8; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 160 - 238
Target Start/End: Complemental strand, 10844728 - 10844650
Alignment:
Q  160 tgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||||||||||  |||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  10844728 tgcaggtatgggactgcatggttgaaggaaggcttataagagttgtttggtactacctatattaacaagatgcatcttc 10844650  T

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Target: chr8; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 163 - 237
Target Start/End: Complemental strand, 27022448 - 27022374
Alignment:
Q  163 aggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatctt 237  Q
    |||||||  ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  27022448 aggtatgggactacatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaacatgcatctt 27022374  T

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Target: chr8; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 160 - 238
Target Start/End: Original strand, 41913003 - 41913081
Alignment:
Q  160 tgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||||||||||  |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  41913003 tgcaggtatgggactgcatgtttgaaagaaggcttataagaattgtttggtgctacctatatcaacaagatgcgtcttc 41913081  T

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Target: chr8; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 165 - 238
Target Start/End: Complemental strand, 34308587 - 34308514
Alignment:
Q  165 gtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||| |||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  34308587 gtatgagactgtatggttgaaggaaggcttataagaactgtttggtactacctatatcaacaagatgcatcttc 34308514  T

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Target: chr8; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 138 - 238
Target Start/End: Complemental strand, 22840664 - 22840564
Alignment:
Q  138 aatgagagaaattctgagactgtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatctt 237  Q
    ||||||||| || ||||| || || |||||||| ||| |||||| ||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  22840664 aatgagagagatcctgaggctttgtaggtatgagactacatggtcgaatgaagacttataagaattgtttggtactatctatatcaacaagatgcatctt 22840565  T
Q  238 c 238  Q
    |    
T  22840564 c 22840564  T

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Target: chr8; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 151 - 238
Target Start/End: Complemental strand, 30335030 - 30334943
Alignment:
Q  151 ctgagactgtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||||||||||||||  |||||| |||||||||||| ||||||| ||||||||| ||||||||||| ||||||||| |||||||    
T  30335030 ctgagactgtgcaggtatgcgactgcaaggttgaaagaagacttataaaaattgtttgatactacctataccaacaagatacatcttc 30334943  T

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Target: chr8; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 68 - 234
Target Start/End: Complemental strand, 8080547 - 8080381
Alignment:
Q  68 tggtcgccagtgtacaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggta 167  Q
    |||||||| ||| ||||| || |||||| ||||||||||  ||||||||||   |||  ||||| |||  ||||||||  || ||||  | ||| |||||    
T  8080547 tggtcgccggtgcacaaggcacgacaatgagcggctcttaacagcttctagaggaactgaatcacatcggaatgagagggatcctgaagccgtgtaggta 8080448  T
Q  168 tgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcat 234  Q
    ||  ||| |||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  8080447 tgggactacatggttgaaggaaagctgataagaattgtttggtactacctatatcaacaagatgcat 8080381  T

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Target: chr8; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 160 - 238
Target Start/End: Complemental strand, 27819359 - 27819281
Alignment:
Q  160 tgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||| |||||| ||| |||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  27819359 tgcaagtatgagacttcatggttgaaggaaggctaataagaattgtttggtactacctatatcaacaaaatgcatcttc 27819281  T

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Target: chr8; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 153 - 238
Target Start/End: Complemental strand, 33852378 - 33852293
Alignment:
Q  153 gagactgtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||||| |||||||||||| |||| ||||||||| |||  |||||||||||||||||||||||||||||| ||||||||| ||||||    
T  33852378 gagaccgtgcaggtatgagactgtatggttgaaggaaaacttataagaattgtttggtactacctatattaacaagatgtatcttc 33852293  T

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Target: chr8; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 162 - 238
Target Start/End: Original strand, 12100726 - 12100802
Alignment:
Q  162 caggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||||||||| |||||||||||||| | | |||||||||| ||||||||||||||||||||||| |||||||||||||    
T  12100726 caggtatgagactgcatggttgaaggcaagcttataagatttgtttggtactacctatatcaataagatgcatcttc 12100802  T

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Target: chr8; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 178 - 238
Target Start/End: Complemental strand, 12827349 - 12827289
Alignment:
Q  178 tggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  12827349 tggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttc 12827289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 159 - 238
Target Start/End: Original strand, 25144804 - 25144883
Alignment:
Q  159 gtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||||||  | |||||| ||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  25144804 gtgcaggtatgggattgcatgattgaaggcaggcttataagaattgtttggtactacctatatcagcaagatgcatcttc 25144883  T

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Target: chr8; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 159 - 238
Target Start/End: Original strand, 28453370 - 28453449
Alignment:
Q  159 gtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||||||| ||| ||||||||||||||  ||||||||||||||||  |||||||||||| ||||||||||||||||    
T  28453370 gtgcaggtatgagacttcatggttgaaagaaaacttataagaattgttttatactacctatattaacaagatgcatcttc 28453449  T

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Target: chr8; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 159 - 238
Target Start/End: Original strand, 32292429 - 32292508
Alignment:
Q  159 gtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||||| |||||  |||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||| |||||||||    
T  32292429 gtgcaagtatgggactgcatggttgaaggaatgcttataagaattgtttggtactatctatatcaacaagttgcatcttc 32292508  T

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Target: chr8; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 163 - 237
Target Start/End: Original strand, 22705208 - 22705282
Alignment:
Q  163 aggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatctt 237  Q
    |||||||  |||| ||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  22705208 aggtatgggactggatgattgaaggaagggttataagaattgtttggtactacctatatcaacaagatgcatctt 22705282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 235
Target Start/End: Complemental strand, 21316223 - 21316147
Alignment:
Q  159 gtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatc 235  Q
    |||||||||||| |||| |||||| || ||  ||||| |||||||||||||||||||||||||||||||||||||||    
T  21316223 gtgcaggtatgagactgtatggttaaatgagcgcttaaaagaattgtttggtactacctatatcaacaagatgcatc 21316147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 165 - 238
Target Start/End: Complemental strand, 34309047 - 34308970
Alignment:
Q  165 gtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacct----atatcaacaagatgcatcttc 238  Q
    |||||| |||| ||||||||| ||||||||||||||| |||||||||||||||    |||||||||||||||||||||    
T  34309047 gtatgagactgtatggttgaaggaaggcttataagaactgtttggtactacctatatatatcaacaagatgcatcttc 34308970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 25148020 - 25148074
Alignment:
Q  180 gttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcat 234  Q
    |||||| ||||||||||||||||||||||||  ||||||||||||||||||||||    
T  25148020 gttgaaggaaggcttataagaattgtttggtcttacctatatcaacaagatgcat 25148074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 238
Target Start/End: Complemental strand, 15567748 - 15567591
Alignment:
Q  81 acaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggtatgaaactgcatgg 180  Q
    ||||||||||||||| ||||||||||| || ||| || ||||||  ||||| |||  ||||||||| ||  ||| |  | ||| |||| | ||  |||||    
T  15567748 acaagacatgacaatgagcggctcttgacaacttataagcaaactgaatcacatcggaatgagagagatcttgacatcgcgcaagtattagacatcatgg 15567649  T
Q  181 ttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    | ||| ||||||||||||||||||||||  ||||| |||| ||||||||| |||||||    
T  15567648 tggaaggaaggcttataagaattgtttgacactacatataccaacaagatacatcttc 15567591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 165 - 234
Target Start/End: Complemental strand, 36968503 - 36968434
Alignment:
Q  165 gtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcat 234  Q
    ||||||||||| ||||||||| || | ||||||||||||| ||||| |||| ||||||||||||||||||    
T  36968503 gtatgaaactgtatggttgaaggatgacttataagaattgattggtgctacttatatcaacaagatgcat 36968434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 240
Target Start/End: Original strand, 17429545 - 17429613
Alignment:
Q  172 actgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcat 240  Q
    ||||||| |||||| |||| ||||| || ||| ||||||||||||||||||||||||||| ||||||||    
T  17429545 actgcattgttgaaggaagacttatgagtattatttggtactacctatatcaacaagatgtatcttcat 17429613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 163 - 238
Target Start/End: Original strand, 3744674 - 3744749
Alignment:
Q  163 aggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||  |||||||||||||| |||| |||||||||||||||||  |||||||||| |||||| ||||| ||||    
T  3744674 aggtatgggactgcatggttgaaggaagacttataagaattgtttgacactacctataccaacaatatgcaccttc 3744749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 178 - 237
Target Start/End: Complemental strand, 15568100 - 15568041
Alignment:
Q  178 tggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatctt 237  Q
    |||||||| |||| ||||||| ||||||||||||  ||||||||||||||||||||||||    
T  15568100 tggttgaaggaagacttataacaattgtttggtatgacctatatcaacaagatgcatctt 15568041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 28912985 - 28912886
Alignment:
Q  138 aatgagagaaattctgagactgtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatctt 237  Q
    ||||||||| ||||| |||| | | |||||||| |||||||| |||||||||| | |||||||||||| || || || || |||| ||||||||||||||    
T  28912985 aatgagagagattcttagaccgagtaggtatgacactgcatgattgaaagaagtcatataagaattgtctgatattatctgtatcgacaagatgcatctt 28912886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 68 - 238
Target Start/End: Original strand, 6466198 - 6466368
Alignment:
Q  68 tggtcgccagtgtacaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggta 167  Q
    |||||||| ||| ||||  ||||||| | |||||||| ||  ||  ||||||||||   ||||| |||| |||||||| ||||||||||  ||||| |||    
T  6466198 tggtcgccggtgcacaaagcatgacagtgagcggctcctgatagtgtctaggcaaattgaatcacatcagaatgagaggaattctgagagagtgcatgta 6466297  T
Q  168 tgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||  ||| |||| || |||| |  || ||| ||||||||||||||||| |||| ||||||| |||||||||    
T  6466298 tgggactacatgtttaaaagtatactaatatgaattgtttggtactacttataccaacaagttgcatcttc 6466368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 238
Target Start/End: Complemental strand, 15819112 - 15819050
Alignment:
Q  176 catggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||||| ||| ||||| || |||||||||||||||| |||||||||| |||||||||||    
T  15819112 catggttgaaggaatgcttagaaaaattgtttggtactacatatatcaacatgatgcatcttc 15819050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 176 - 238
Target Start/End: Original strand, 3745150 - 3745212
Alignment:
Q  176 catggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||||| |||  |||||||||| ||||| |||||||||||| |||||| ||||||||||    
T  3745150 catggttgaaggaaaacttataagaactgtttagtactacctataccaacaatatgcatcttc 3745212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 224
Target Start/End: Complemental strand, 29971511 - 29971450
Alignment:
Q  163 aggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaa 224  Q
    |||||||| ||| |||||||||| ||||  |||||||||||||||| ||||| |||||||||    
T  29971511 aggtatgagactacatggttgaaggaagatttataagaattgtttgatactatctatatcaa 29971450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 238
Target Start/End: Complemental strand, 31283719 - 31283686
Alignment:
Q  205 tttggtactacctatatcaacaagatgcatcttc 238  Q
    ||||||||||||||||| ||||||||||||||||    
T  31283719 tttggtactacctatattaacaagatgcatcttc 31283686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 87; Significance: 8e-42; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 68 - 238
Target Start/End: Complemental strand, 8467998 - 8467829
Alignment:
Q  68 tggtcgccagtgtacaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggta 167  Q
    |||||||||||| ||||| ||||||| |  ||||||| ||||||||||||||||| || || || |||| ||||| ||  || |||||||||||||||||    
T  8467998 tggtcgccagtgcacaaggcatgacattgcgcggctcctggcagcttctaggcaa-ccgaaccacatcagaatgaaagggatcctgagactgtgcaggta 8467900  T
Q  168 tgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||| ||| |||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  8467899 tgagactacatggttgaaggaagacttataagaattgtttggtactacctataccaacaagatgcatcttc 8467829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 68 - 238
Target Start/End: Complemental strand, 50399192 - 50399022
Alignment:
Q  68 tggtcgccagtgtacaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggta 167  Q
    |||||||||||| ||||| ||||||||| |||||||  || || ||||||| ||| || ||||| |||  ||||||||  || ||||||| ||| |||||    
T  50399192 tggtcgccagtgcacaaggcatgacaatgagcggcttctgacaacttctagacaagccgaatcacatcggaatgagagggatcctgagaccgtgtaggta 50399093  T
Q  168 tgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||| | | |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  50399092 tgagattacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacacgatgcatcttc 50399022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 68 - 238
Target Start/End: Complemental strand, 12692198 - 12692028
Alignment:
Q  68 tggtcgccagtgtacaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggta 167  Q
    |||||||| ||| ||||| || |||||| |||||||| || ||||||||||   |||| ||||| | |  ||||||||   | ||||| | |||||||||    
T  12692198 tggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaatcacaccggaatgagagggttcctgaggccgtgcaggta 12692099  T
Q  168 tgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12692098 tgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 12692028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 68 - 238
Target Start/End: Complemental strand, 50398737 - 50398567
Alignment:
Q  68 tggtcgccagtgtacaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggta 167  Q
    |||||||| ||| ||||| ||||||||| ||||||||  | || ||||||| ||| || ||||| |||  ||||||||  || ||||| | ||| |||||    
T  50398737 tggtcgccggtgcacaaggcatgacaatgagcggctcccgacaacttctagacaagccgaatcacatcggaatgagagggatcctgaggccgtgtaggta 50398638  T
Q  168 tgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |   ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50398637 taggactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 50398567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 68 - 238
Target Start/End: Complemental strand, 1645948 - 1645778
Alignment:
Q  68 tggtcgccagtgtacaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggta 167  Q
    |||||||| ||| ||||| || |||||| |||||||| || ||||||||||   |||| ||||| |||  |||||||| |||  |||| | ||| |||||    
T  1645948 tggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaatcacatcggaatgagaggaatcttgaggccgtgtaggta 1645849  T
Q  168 tgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||  ||| |||||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  1645848 tgggactacatggttgaaggaagacttataagaattgtttggtattacctatatcaacaagatgcatcttc 1645778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 44 - 237
Target Start/End: Original strand, 27026414 - 27026613
Alignment:
Q  44 tgtaacgcccgaggctaacgagaa-------tggtcgccagtgtacaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatca 136  Q
    |||||||||||||||| |||||||       |||||| | ||| ||||| ||||||||| |||| ||| ||| ||||| |||||||||| ||||| ||||    
T  27026414 tgtaacgcccgaggctgacgagaacggggagtggtcgtcggtgcacaaggcatgacaatgagcgactcctggtagcttttaggcaaaccgaatcacatca 27026513  T
Q  137 aaatgagagaaattctgagactgtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatct 236  Q
     ||||||||  ||  || ||| |||||||||||  ||| || | ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  27026514 gaatgagagggatattg-gacggtgcaggtatgggactacacgattgaaggaaggcttataagaattgtttgatactacctatatcaacaagatgcatct 27026612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 81 - 238
Target Start/End: Complemental strand, 21220517 - 21220360
Alignment:
Q  81 acaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggtatgaaactgcatgg 180  Q
    ||||| || |||||| ||||||||  ||||||||||||   |||| ||||| |||| ||||||||  ||  |||| |  || ||||||||||||  ||||    
T  21220517 acaaggcacgacaatgagcggctcccggcagcttctagaggaaccgaatcacatcagaatgagagggatcatgaggccatgtaggtatgaaactatatgg 21220418  T
Q  181 ttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21220417 ttgaaggaatgcttataagaattgtttggtactacctatatcaacaagatgcatcttc 21220360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 159 - 238
Target Start/End: Complemental strand, 9423966 - 9423887
Alignment:
Q  159 gtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||||| |||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  9423966 gtgcatgtatgggactgcatggttgaaagaaggcttataataattgtttggtactacctatatcaacaagatgcatcttc 9423887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 172 - 238
Target Start/End: Complemental strand, 44470969 - 44470903
Alignment:
Q  172 actgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44470969 actgtatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 44470903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 162 - 238
Target Start/End: Complemental strand, 44471430 - 44471354
Alignment:
Q  162 caggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||||||||| ||| |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  44471430 caggtatgagactacatggttgaaggaagacttataagaattgtttggtactacctatatcaacaagatgcatcttc 44471354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 63 - 238
Target Start/End: Original strand, 1464083 - 1464258
Alignment:
Q  63 gagaatggtcgccagtgtacaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgc 162  Q
    |||| |||||||| ||| | ||||||||||||| | ||||| | | || ||| ||| | |||| ||||| |||| ||||||||  ||  || ||| |||     
T  1464083 gagagtggtcgccggtgcataagacatgacaatgaacggctttcgacaccttttagacgaaccgaatcacatcagaatgagagggatcatgcgaccgtgt 1464182  T
Q  163 aggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||| | | ||| ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  1464183 aggtatgagaatacatagttgaaagaaaacttataagaattgtttggtactacctatatcaacaagatgcatcttc 1464258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 163 - 238
Target Start/End: Complemental strand, 23942893 - 23942818
Alignment:
Q  163 aggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||||||| |||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  23942893 aggtatggaactacatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttc 23942818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 68 - 231
Target Start/End: Complemental strand, 29628866 - 29628703
Alignment:
Q  68 tggtcgccagtgtacaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggta 167  Q
    |||||||| ||| ||||| || | |||| || ||||  || ||||||||||   |||| ||||| ||| |||||||||  || ||||| | ||| |||||    
T  29628866 tggtcgccggtgcacaaggcacgccaatgagtggcttctgacagcttctagaggaaccgaatcacatcgaaatgagagggatcctgaggccgtgtaggta 29628767  T
Q  168 tgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatg 231  Q
    ||| ||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  29628766 tgagactacatggttgaaggaagacttataagaattgtttggtactacctatatcaacaagatg 29628703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 101 - 238
Target Start/End: Original strand, 49998608 - 49998747
Alignment:
Q  101 gctcttggca-gcttctaggcaaacc-aaatcatatcaaaatgagagaaattctgagactgtgcaggtatgaaactgcatggttgaaagaaggcttataa 198  Q
    |||||||||| |||||||| |||| | |||||| |||  ||||||||  || || || ||||| ||| |||  |||||||||||||| |||| |||||||    
T  49998608 gctcttggcatgcttctagacaaaactaaatcacatcggaatgagagggatcctaaggctgtgtaggcatgggactgcatggttgaaggaagacttataa 49998707  T
Q  199 gaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  49998708 gaattgtttggtactacctatatcaacaagatgcatcttc 49998747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 68 - 238
Target Start/End: Original strand, 3169147 - 3169317
Alignment:
Q  68 tggtcgccagtgtacaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggta 167  Q
    ||||| || ||| |||||||| |||||| |||| ||| || |||||| |||   |||| ||||| |||  |||||||| |||  |||| | ||| |||||    
T  3169147 tggtcaccggtgcacaagacacgacaatgagcgactcctgacagcttatagaggaaccgaatcacatcggaatgagaggaatcatgaggccgtgtaggta 3169246  T
Q  168 tgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||  ||| |||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  3169247 tgggactacatggttgaaggaagacttataaaaattgtttggtactacctatatcaacaagatgcatcttc 3169317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 172 - 238
Target Start/End: Complemental strand, 23350378 - 23350312
Alignment:
Q  172 actgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  23350378 actgcatggttgaaggaaggcttataagaattgtttggtacttcctatatcaacaagatgcatcttc 23350312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 68 - 238
Target Start/End: Complemental strand, 24629632 - 24629462
Alignment:
Q  68 tggtcgccagtgtacaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggta 167  Q
    |||||||| ||  ||||| || |||||| ||||||||||| ||||||||||   |||| ||||| | |  ||||||||   | |||||   ||| |||||    
T  24629632 tggtcgccggttcacaaggcacgacaatgagcggctcttgacagcttctagaggaaccgaatcacaccggaatgagagggttcctgaggtcgtgtaggta 24629533  T
Q  168 tgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||  ||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  24629532 tgggactgcatggttaaaggaatgcttataagaattgtttggtactacctatatcaacaagatgcatcttc 24629462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 177 - 238
Target Start/End: Complemental strand, 4127979 - 4127918
Alignment:
Q  177 atggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4127979 atggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 4127918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 163 - 238
Target Start/End: Complemental strand, 14572254 - 14572179
Alignment:
Q  163 aggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||  ||| |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14572254 aggtatgggactacatggttgaagggaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 14572179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 176 - 238
Target Start/End: Complemental strand, 7678713 - 7678651
Alignment:
Q  176 catggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  7678713 catggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttc 7678651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 68 - 238
Target Start/End: Original strand, 14351736 - 14351906
Alignment:
Q  68 tggtcgccagtgtacaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggta 167  Q
    |||| ||| ||| ||||| || |||||| ||||||||  | || ||||||| |||||| ||||| | || ||||||||  || |||||   ||||| |||    
T  14351736 tggttgccggtgcacaaggcacgacaatgagcggctcccgacaacttctagacaaaccgaatcacaccagaatgagagggatcctgaggtcgtgcatgta 14351835  T
Q  168 tgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||  ||||||||||||| |||||||| ||||| || |||||||||| |||||||||||||||||||||||    
T  14351836 tgagtctgcatggttgaaggaaggcttgtaagagttttttggtactatctatatcaacaagatgcatcttc 14351906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 172 - 238
Target Start/End: Complemental strand, 31817947 - 31817881
Alignment:
Q  172 actgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  31817947 actgcatggttgaaggaaggcttataagaattgttcggtactacctataccaacaagatgcatcttc 31817881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 112 - 238
Target Start/End: Complemental strand, 51331436 - 51331310
Alignment:
Q  112 cttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggta 211  Q
    ||||||| ||| || ||||| |||  |||||||| |||  |||| | ||| |||||||  ||| |||||||||| |||||||||||||||||||||||||    
T  51331436 cttctagacaagccgaatcacatcggaatgagaggaatcatgaggccgtgtaggtatgggactacatggttgaaggaaggcttataagaattgtttggta 51331337  T
Q  212 ctacctatatcaacaagatgcatcttc 238  Q
    ||| ||||||||||||||| |||||||    
T  51331336 ctatctatatcaacaagatacatcttc 51331310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 163 - 238
Target Start/End: Complemental strand, 4127541 - 4127466
Alignment:
Q  163 aggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||  ||| ||| |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  4127541 aggtatgggactacatagttgaaggaagacttataagaattgtttggtactacctatatcaacaagatgcatcttc 4127466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 163 - 238
Target Start/End: Complemental strand, 14571825 - 14571750
Alignment:
Q  163 aggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||  ||| |||||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  14571825 aggtatgggacttcatggttgaagggatgcttataagaattgtttggtactacctatatcaacaagatgcatcttc 14571750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 21067766 - 21067837
Alignment:
Q  159 gtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagat 230  Q
    |||||||||||  |||||||||||||| |||| ||||||||||||||||||| |||||||||||||||||||    
T  21067766 gtgcaggtatgggactgcatggttgaaggaagacttataagaattgtttggtgctacctatatcaacaagat 21067837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 68 - 238
Target Start/End: Complemental strand, 24629179 - 24629006
Alignment:
Q  68 tggtcgccagtgtacaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggta 167  Q
    |||||||| ||| ||||| || |||||| |||||||| || |||||||| |   |||| ||||| | |  ||||||||   | ||||| | ||| |||||    
T  24629179 tggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttcttgaggaaccgaatcacaccggaatgagagggttcctgaggccgtgtaggta 24629080  T
Q  168 tgaaactgcatggttgaaagaa---ggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||  ||||||||||| || |||   |||||||||||||||||||||||||||||||||||||||||||||||||    
T  24629079 tgggactgcatggttaaaggaattaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 24629006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 176 - 238
Target Start/End: Original strand, 17628560 - 17628622
Alignment:
Q  176 catggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||||| | |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  17628560 catggttgaaggtaggcttataagaattgtttggtactacctataccaacaagatgcatcttc 17628622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 63 - 238
Target Start/End: Complemental strand, 23943442 - 23943271
Alignment:
Q  63 gagaatggtcgccagtgtacaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgc 162  Q
    |||| |||||||| |||||  || || |||||| ||||||||||| ||||||||||   |||| ||||| |||||||||| ||  || ||||| | |||     
T  23943442 gagagtggtcgccggtgtatgaggcacgacaatgagcggctcttgacagcttctagaggaaccgaatcacatcaaaatgatagggatcctgaggc-gtgt 23943344  T
Q  163 aggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||  ||   ||||||||| |||| ||||||| || | ||||||||||||||||||||||||||||||||||    
T  23943343 aggtatgtcac---atggttgaaggaagacttataaaaaatatttggtactacctatatcaacaagatgcatcttc 23943271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 99 - 234
Target Start/End: Original strand, 35871598 - 35871735
Alignment:
Q  99 cggctcttggca-gcttctaggcaaacca-aatcatatcaaaatgagagaaattctgagactgtgcaggtatgaaactgcatggttgaaagaaggcttat 196  Q
    |||||| ||||| ||||||||||||| |  ||||| |||  ||||||||  || ||||| | || ||||||||  ||| |||||||||| ||||||||||    
T  35871598 cggctcctggcatgcttctaggcaaaactgaatcacatcggaatgagagggatcctgaggccgtacaggtatgggacttcatggttgaaggaaggcttat 35871697  T
Q  197 aagaattgtttggtactacctatatcaacaagatgcat 234  Q
    | |||||||||||||| |||||||||||||||||||||    
T  35871698 atgaattgtttggtaccacctatatcaacaagatgcat 35871735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 186 - 237
Target Start/End: Complemental strand, 20306242 - 20306191
Alignment:
Q  186 agaaggcttataagaattgtttggtactacctatatcaacaagatgcatctt 237  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  20306242 agaaggcttataagaattgtttggtactatctatatcaacaagatgcatctt 20306191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 159 - 238
Target Start/End: Original strand, 21067314 - 21067393
Alignment:
Q  159 gtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||||| |||||| |||||||||||||| |||| || |||| |||| ||||||||||| ||||||||||||||||||||||    
T  21067314 gtgcatgtatgagactgcatggttgaaggaagactaataataattatttggtactacatatatcaacaagatgcatcttc 21067393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 100 - 238
Target Start/End: Complemental strand, 15306265 - 15306120
Alignment:
Q  100 ggctcttggcagcttctaggcaaacca-aatcatatcaaaatgagagaaattctgagactgtgcaggtatgaaactgcatggttgaaagaaggcttataa 198  Q
    ||||| |||||||||||||||||| || || || |||| ||||||||  || ||||| ||||| |||||||  ||| |||||| |||||||| |||||||    
T  15306265 ggctcctggcagcttctaggcaaaacagaaccacatcagaatgagagggatcctgaggctgtgtaggtatgggactacatggtcgaaagaagacttataa 15306166  T
Q  199 gaattg------tttggtactacctatatcaacaagatgcatcttc 238  Q
    || |||      ||||||||||||||||| ||||||||||||||||    
T  15306165 gatttgagcaattttggtactacctatataaacaagatgcatcttc 15306120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 88 - 238
Target Start/End: Original strand, 27029239 - 27029388
Alignment:
Q  88 atgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggtatgaaactgcatggttgaaag 187  Q
    |||||||| |||||||  ||| ||||| |||| ||||| ||| | |||| ||||||||  |||| | |||  |||||| |||| ||| || | ||||| |    
T  27029239 atgacaatgagcggcttctggtagcttataggaaaaccgaattacatcagaatgagagggattcgg-gaccatgcaggaatgagactacacgattgaagg 27029337  T
Q  188 aaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||| |||||||||||| ||||||||||| ||||||||||||||||||||||    
T  27029338 aagacttataagaattatttggtactacttatatcaacaagatgcatcttc 27029388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 176 - 238
Target Start/End: Complemental strand, 53996206 - 53996144
Alignment:
Q  176 catggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||||| ||| |||||||| ||||||||||||||||||||||||||||||| |||||||    
T  53996206 catggttgaaggaatgcttataaaaattgtttggtactacctatatcaacaagattcatcttc 53996144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 110 - 238
Target Start/End: Original strand, 41869900 - 41870029
Alignment:
Q  110 agcttctaggcaaacc-aaatcatatcaaaatgagagaaattctgagactgtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttg 208  Q
    |||||||||||||| | |||||| |||  | ||||||  || |||||||||| ||  ||||  |||||||| ||||| |||| |||||||||||||| ||    
T  41869900 agcttctaggcaaaactaaatcacatcggagtgagagggatcctgagactgtacatatatgggactgcatgattgaaggaagacttataagaattgtatg 41869999  T
Q  209 gtactacctatatcaacaagatgcatcttc 238  Q
     |||||||||||||||||||| ||||||||    
T  41870000 atactacctatatcaacaagacgcatcttc 41870029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 159 - 238
Target Start/End: Complemental strand, 31817506 - 31817427
Alignment:
Q  159 gtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||||| |||||| ||| |||||||||| ||| | |||||| ||||||||||||||||||||| |||||| ||||||||||    
T  31817506 gtgcatgtatgagacttcatggttgaaggaacgtttataataattgtttggtactacctataccaacaaaatgcatcttc 31817427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 159 - 237
Target Start/End: Original strand, 13266118 - 13266196
Alignment:
Q  159 gtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatctt 237  Q
    |||||||||||  | |||||||||||| |||||||||||| |||| ||| ||||| |||||||||| ||||||||||||    
T  13266118 gtgcaggtatgggaatgcatggttgaaggaaggcttataataattttttagtactccctatatcaataagatgcatctt 13266196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 42838647 - 42838733
Alignment:
Q  151 ctgagactgtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatctt 237  Q
    ||||||||||| | |||||| ||| ||| ||| || |||| | ||||| |||||||||||||||||||||||||||| |||||||||    
T  42838647 ctgagactgtgtaagtatgagactacatagttcaaggaagacgtataaaaattgtttggtactacctatatcaacaaaatgcatctt 42838733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 68 - 237
Target Start/End: Original strand, 17028815 - 17028984
Alignment:
Q  68 tggtcgccagtgtacaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggta 167  Q
    |||||| | ||| ||||| ||||||||| || ||||| | |||||||||||||||||  ||||| |||  ||||||||  || ||||  |  |||| |||    
T  17028815 tggtcggcggtgcacaaggcatgacaatgagaggctccttgcagcttctaggcaaactgaatcacatcggaatgagagggatcctgaagccttgcatgta 17028914  T
Q  168 tgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatctt 237  Q
    ||  ||||||| |||||| || |  || ||||||||||| ||| ||||||||||||||||||||| ||||    
T  17028915 tgggactgcatagttgaaggaggatttgtaagaattgttaggtgctacctatatcaacaagatgcgtctt 17028984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 173 - 238
Target Start/End: Complemental strand, 23976313 - 23976248
Alignment:
Q  173 ctgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||||||| ||||| ||||  ||||||||||||||||||||||||||||  ||||||||||||||||    
T  23976313 ctgcatgattgaaggaagagttataagaattgtttggtactacctatactaacaagatgcatcttc 23976248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 193 - 238
Target Start/End: Complemental strand, 50814899 - 50814854
Alignment:
Q  193 ttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
T  50814899 ttataagaattgtttggtactatctatatcaacaagatgcatcttc 50814854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 178 - 238
Target Start/End: Complemental strand, 27578546 - 27578486
Alignment:
Q  178 tggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||| || || ||||||||||| |||||| |||||||||||||||||||||||||||    
T  27578546 tggttgaatgatggtttataagaattatttggtgctacctatatcaacaagatgcatcttc 27578486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 234
Target Start/End: Original strand, 17029362 - 17029437
Alignment:
Q  159 gtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcat 234  Q
    ||||| |||||  ||||||| |||||| |||| ||| ||| |||||||| ||||||||||||||||||||||||||    
T  17029362 gtgcaagtatgggactgcatagttgaatgaagacttgtaataattgtttagtactacctatatcaacaagatgcat 17029437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 238
Target Start/End: Complemental strand, 43929071 - 43928992
Alignment:
Q  159 gtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||||||| |||   |||| ||| ||| ||||| ||||||||||||||||||| |||| |||||||||||||||||    
T  43929071 gtgcaggtatgagactatttggtcgaaggaaagcttacaagaattgtttggtactacatataccaacaagatgcatcttc 43928992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 81 - 238
Target Start/End: Original strand, 4185668 - 4185826
Alignment:
Q  81 acaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaat-catatcaaaatgagagaaattctgagactgtgcaggtatgaaactgcatg 179  Q
    ||||||||||| ||| || ||||| | ||||||||||||  |||| ||| || |||||||||||||   |  |||| |  ||||||||||| || |||||    
T  4185668 acaagacatgaaaatgagtggctcatagcagcttctaggtgaaccgaattcacatcaaaatgagagggttcatgaggccatgcaggtatgagacggcatg 4185767  T
Q  180 gttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||| || |||  | ||||||||||||||| ||| || |||| |||||||||||||||||    
T  4185768 gttaaaggaatacatataagaattgtttgataccacatataccaacaagatgcatcttc 4185826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 192 - 238
Target Start/End: Complemental strand, 13613972 - 13613926
Alignment:
Q  192 cttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||    
T  13613972 cttataagaattgtttgataccacctatatcaacaagatgcatcttc 13613926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 238
Target Start/End: Original strand, 33764909 - 33764971
Alignment:
Q  176 catggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||| | |||| ||| ||||||||||||||| ||||||||| |||||||||||||||||    
T  33764909 catggttggatgaagacttttaagaattgtttggtgctacctataccaacaagatgcatcttc 33764971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 52048771 - 52048693
Alignment:
Q  162 caggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcat 240  Q
    ||||||||||||||||| | |||| |||   |||||||||||||||| |||||| ||||  ||||||||||||||||||    
T  52048771 caggtatgaaactgcatagctgaaggaaaatttataagaattgtttgatactacgtatactaacaagatgcatcttcat 52048693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 169
Target Start/End: Complemental strand, 33987270 - 33987169
Alignment:
Q  68 tggtcgccagtgtacaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggta 167  Q
    |||||| ||||| ||||| ||||||||| |||| |||||||||||||||||||||||  ||||| |||  ||||||||  ||  |||||  |||||||||    
T  33987270 tggtcgtcagtgcacaaggcatgacaatgagcgactcttggcagcttctaggcaaactgaatcacatcggaatgagagggatcatgagatcgtgcaggta 33987171  T
Q  168 tg 169  Q
    ||    
T  33987170 tg 33987169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 216
Target Start/End: Complemental strand, 53855001 - 53854858
Alignment:
Q  73 gccagtgtacaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggtatgaaa 172  Q
    ||||||||||||| |  |||||| ||||||||  | |||||| ||| | |||| ||||| |||  ||||||||  ||  |||  | ||| |||||||| |    
T  53855001 gccagtgtacaaggctcgacaatgagcggctcccgacagcttatagacgaaccgaatcacatcggaatgagagggatcatgaagcagtgtaggtatgaga 53854902  T
Q  173 ctgcatggttgaaagaaggcttataagaattgtttggtactacc 216  Q
    ||  ||||||||| |||| |||||||||||||||||||||||||    
T  53854901 ctatatggttgaaggaagacttataagaattgtttggtactacc 53854858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 160 - 226
Target Start/End: Original strand, 17506418 - 17506484
Alignment:
Q  160 tgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaaca 226  Q
    |||| |||||| | |||||| || ||||||| |||||||||||||| | ||||||||||||||||||    
T  17506418 tgcatgtatgagagtgcatgattaaaagaagacttataagaattgtatagtactacctatatcaaca 17506484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 101 - 238
Target Start/End: Original strand, 17628941 - 17629079
Alignment:
Q  101 gctcttggcagcttctaggcaaaccaaatc-atatcaaaatgagagaaattctgagactgtgcaggtatgaaactgcatggttgaaagaaggcttataag 199  Q
    ||||||||||||||||||||||| | |||| | |||| |||||| |  || || ||   |||||||||||  | || |||||||||  ||  ||||||||    
T  17628941 gctcttggcagcttctaggcaaatcgaatccacatcagaatgagtgggatcctaaggtcgtgcaggtatgtgaatgtatggttgaataaaaacttataag 17629040  T
Q  200 aattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||||||||||||||||  || ||||||| |||||    
T  17629041 aattgtttggtactacctatactaataagatgcctcttc 17629079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 188 - 238
Target Start/End: Complemental strand, 23091590 - 23091540
Alignment:
Q  188 aaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||||| ||||| |||||||||||||||| ||||| ||||||||||||||||    
T  23091590 aaggcgtataaaaattgtttggtactacatatattaacaagatgcatcttc 23091540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 224
Target Start/End: Complemental strand, 27579013 - 27578952
Alignment:
Q  163 aggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaa 224  Q
    |||||||| ||| | |||||||  |||| |||||||||||||||||||||||| ||||||||    
T  27579013 aggtatgacactacttggttgactgaagacttataagaattgtttggtactacatatatcaa 27578952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 181 - 234
Target Start/End: Original strand, 34554483 - 34554536
Alignment:
Q  181 ttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcat 234  Q
    ||||||||| ||||||||||||||||||  |||||||||| || ||||||||||    
T  34554483 ttgaaagaatgcttataagaattgtttgacactacctataccagcaagatgcat 34554536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 230
Target Start/End: Original strand, 53391925 - 53391990
Alignment:
Q  165 gtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagat 230  Q
    |||||| ||||||||||||||  || |||||||| ||||||||| ||| | |||||||||||||||    
T  53391925 gtatgagactgcatggttgaagaaatgcttataaaaattgtttgataccatctatatcaacaagat 53391990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 234
Target Start/End: Complemental strand, 24271659 - 24271583
Alignment:
Q  158 tgtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcat 234  Q
    ||||||||||||| ||| ||||||| ||  ||| | |||||||||| |||| |||||||||||  ||||||||||||    
T  24271659 tgtgcaggtatgagactacatggttaaagtaagacatataagaattatttgatactacctatacgaacaagatgcat 24271583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 238
Target Start/End: Complemental strand, 39902518 - 39902482
Alignment:
Q  202 ttgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||||||||||||| |||||||||||||||||||||||    
T  39902518 ttgtttggtactatctatatcaacaagatgcatcttc 39902482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 234
Target Start/End: Original strand, 45682252 - 45682310
Alignment:
Q  176 catggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcat 234  Q
    |||| ||||| ||||| ||||||||||| ||||||| || ||||| |||||||||||||    
T  45682252 catgattgaatgaaggtttataagaattatttggtattatctataccaacaagatgcat 45682310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 212
Target Start/End: Original strand, 17505895 - 17506016
Alignment:
Q  91 acaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggtatgaaactgcatggttgaaagaag 190  Q
    ||||| ||||||||||| || ||||||| | ||||||| || |||||||| ||| | ||  |||||   |||| |||||| |||| |||||| || ||||    
T  17505895 acaatgagcggctcttgacaccttctagacgaaccaaaccacatcaaaataagatagatcatgagatcatgcacgtatgagactgtatggttaaatgaag 17505994  T
Q  191 gcttataagaattgtttggtac 212  Q
     ||||||| |||||||| ||||    
T  17505995 tcttataaaaattgtttagtac 17506016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 109 - 234
Target Start/End: Complemental strand, 26200446 - 26200318
Alignment:
Q  109 cagcttctaggcaaaccaaat-catatcaaaatgagagaaattctgagactgtgcaggtatgaaactgcatggttgaaagaag--gcttataagaattgt 205  Q
    ||||||||||||||||  ||| || |||| ||||||||  || |||| | |||| |||||||  ||  |||||||||| ||||  |||||||| ||||||    
T  26200446 cagcttctaggcaaactgaattcacatcagaatgagagggatcctgatattgtgtaggtatgggacatcatggttgaaggaagaggcttataacaattgt 26200347  T
Q  206 ttggtactacctatatcaacaagatgcat 234  Q
    ||| ||||| |||||  ||||||||||||    
T  26200346 ttgatactaactatacaaacaagatgcat 26200318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 214
Target Start/End: Complemental strand, 2499723 - 2499647
Alignment:
Q  138 aatgagagaaattctgagactgtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtacta 214  Q
    ||||||||  ||||| | || |||||||||||| ||| ||||||||||  ||  ||||||| |||||||||||||||    
T  2499723 aatgagagggattctaaaaccgtgcaggtatgagacttcatggttgaagcaacacttataaaaattgtttggtacta 2499647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 82; Significance: 8e-39; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 81 - 237
Target Start/End: Original strand, 32292838 - 32292995
Alignment:
Q  81 acaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaat-catatcaaaatgagagaaattctgagactgtgcaggtatgaaactgcatg 179  Q
    ||||||||||||||| ||| |||| ||||| |||||||||||||||||| || ||   |||||||||||| || |||  |||||||||||| ||||||||    
T  32292838 acaagacatgacaatgagcagctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatccttagatcgtgcaggtatgagactgcatg 32292937  T
Q  180 gttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatctt 237  Q
    |||||| |||||||||||||||||||||||||||||||||| |||||| || ||||||    
T  32292938 gttgaatgaaggcttataagaattgtttggtactacctataccaacaaaatacatctt 32292995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 99 - 238
Target Start/End: Original strand, 13492759 - 13492900
Alignment:
Q  99 cggctcttggca-gcttctaggcaaacca-aatcatatcaaaatgagagaaattctgagactgtgcaggtatgaaactgcatggttgaaagaaggcttat 196  Q
    |||||| ||||| ||||||||||||| |  |||||||||  |||||||   || ||||| |||||||||||||| |||||||||||||| ||||||||||    
T  13492759 cggctcctggcatgcttctaggcaaaactgaatcatatcggaatgagaaggatcctgaggctgtgcaggtatgagactgcatggttgaaggaaggcttat 13492858  T
Q  197 aagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    || |||||||||||||||||||||||||||||||||||||||    
T  13492859 aataattgtttggtactacctatatcaacaagatgcatcttc 13492900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 63 - 238
Target Start/End: Complemental strand, 20896898 - 20896723
Alignment:
Q  63 gagaatggtcgccagtgtacaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgc 162  Q
    |||| ||||||||  || ||||| ||||||||| ||||||||  | || ||||||| ||| || ||||| |||  ||||||||  || || || | |||     
T  20896898 gagagtggtcgccgttgcacaaggcatgacaatgagcggctcccgacaacttctagacaagccgaatcacatcggaatgagagggatccttaggccgtgt 20896799  T
Q  163 aggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20896798 aggtatgagactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 20896723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 68 - 238
Target Start/End: Complemental strand, 20126387 - 20126217
Alignment:
Q  68 tggtcgccagtgtacaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggta 167  Q
    |||||||| ||| ||||| ||||||||| |||||||| || || ||||||| ||| |  ||||| |||  ||||||||  || || || ||||| |||||    
T  20126387 tggtcgccggtgcacaaggcatgacaatgagcggctcctgacaacttctagacaagctgaatcacatcggaatgagagggatcctaaggctgtgtaggta 20126288  T
Q  168 tgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||| ||| |||||||||| |||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  20126287 tgagactacatggttgaaggaaggcttataagaatggtttgatactacctatatcaacaagatgcatcttc 20126217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 21311996 - 21312082
Alignment:
Q  152 tgagactgtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||| |||||||||||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  21311996 tgaggctgtgcaggtatgagactgcatggttgaaggaaggcttataagaattgttaggtactacctatatcaacaagatgcatcttc 21312082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 99 - 238
Target Start/End: Original strand, 16519939 - 16520079
Alignment:
Q  99 cggctcttggcagcttctaggcaaacca-aatcatatcaaaatgagagaaattctgagactgtgcaggtatgaaactgcatggttgaaagaaggcttata 197  Q
    |||||| |||||||||||||||||| || ||||| |||  ||||||||  || ||||| ||||| |||||||| ||| |||||| ||| ||||||||||     
T  16519939 cggctcctggcagcttctaggcaaaacagaatcacatcggaatgagagggatcctgaggctgtgtaggtatgagactacatggtcgaaggaaggcttatg 16520038  T
Q  198 agaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||| |||||||||||||||||||||||||||||||||||||    
T  16520039 agatttgtttggtactacctatatcaacaagatgcatcttc 16520079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 68 - 238
Target Start/End: Complemental strand, 6331117 - 6330947
Alignment:
Q  68 tggtcgccagtgtacaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggta 167  Q
    |||||||| ||| ||||| ||||||||| ||||||||  | || ||||||| ||| || ||||| |||  |||||||   || ||||| | ||| |||||    
T  6331117 tggtcgccggtgcacaaggcatgacaatgagcggctcccgacaacttctagacaagccgaatcacatcggaatgagatggatcctgaggccgtgtaggta 6331018  T
Q  168 tgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||| ||| |||||||||| |||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  6331017 tgagactacatggttgaaggaagacttataagaattgtttggtactacctatatcaacaatatgcatcttc 6330947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 68 - 238
Target Start/End: Original strand, 20850262 - 20850432
Alignment:
Q  68 tggtcgccagtgtacaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggta 167  Q
    |||||||| ||| ||||| || |||||| |||||||| || ||||||||||   |||| ||||| | |  ||||||||   |  |||| | |||||||||    
T  20850262 tggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaatcacaccggaatgagagggttcatgaggccgtgcaggta 20850361  T
Q  168 tgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||  |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  20850362 tgggactgcatggttgaaggaaggcttataagaattgttttgtactacctatatcaacaagatgcatcttc 20850432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 121 - 238
Target Start/End: Complemental strand, 13191665 - 13191548
Alignment:
Q  121 aaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctata 220  Q
    |||| |||||| |||  ||||||||  || || ||||| || |||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  13191665 aaactaaatcacatcggaatgagagggatcctaagactatgtaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctata 13191566  T
Q  221 tcaacaagatgcatcttc 238  Q
    ||||||||||||||||||    
T  13191565 tcaacaagatgcatcttc 13191548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 151 - 238
Target Start/End: Original strand, 11062309 - 11062396
Alignment:
Q  151 ctgagactgtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||||| ||||| |||||||||||| |||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  11062309 ctgaggctgtgtaggtatgaaactacatggttgaaggaaggcttataagaagtgttttgtactacctatatcaacaagatgcatcttc 11062396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 159 - 238
Target Start/End: Complemental strand, 17027645 - 17027566
Alignment:
Q  159 gtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  17027645 gtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagattcatcttc 17027566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 159 - 238
Target Start/End: Original strand, 27334193 - 27334272
Alignment:
Q  159 gtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  27334193 gtgcaggtatggaactgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgaatcttc 27334272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 159 - 238
Target Start/End: Original strand, 27394933 - 27395012
Alignment:
Q  159 gtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  27394933 gtgcaggtatggaactgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgaatcttc 27395012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 68 - 238
Target Start/End: Original strand, 3652427 - 3652597
Alignment:
Q  68 tggtcgccagtgtacaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggta 167  Q
    |||||| | ||| ||||| || |||||| ||||||||  | ||||||||||   |||| ||||| |||  ||||||||  || ||||| ||||| |||||    
T  3652427 tggtcgtcggtgcacaaggcacgacaatgagcggctcccgacagcttctagaggaaccgaatcacatcggaatgagagggatcctgaggctgtgtaggta 3652526  T
Q  168 tgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||  ||| |||||||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  3652527 tgggactacatggttgaaggaaggcttataagaattgtctgatactacctatatcaacaagatgcatcttc 3652597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 99 - 238
Target Start/End: Original strand, 9352033 - 9352173
Alignment:
Q  99 cggctcttggcagcttctaggcaaacca-aatcatatcaaaatgagagaaattctgagactgtgcaggtatgaaactgcatggttgaaagaaggcttata 197  Q
    |||||| |||||||||||||||||| || ||||| ||| |||||||||  || ||||| ||||| |||||||| ||| |||||| ||| | || ||||||    
T  9352033 cggctcctggcagcttctaggcaaaacataatcacatcgaaatgagagggatcctgaggctgtgtaggtatgagactacatggtcgaagggagacttata 9352132  T
Q  198 agaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    | | |||||||||||||||||||| ||||||||||||||||    
T  9352133 atatttgtttggtactacctatataaacaagatgcatcttc 9352173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 99 - 234
Target Start/End: Complemental strand, 9440484 - 9440348
Alignment:
Q  99 cggctcttggcagcttctaggcaa-accaaatcatatcaaaatgagagaaattctgagactgtgcaggtatgaaactgcatggttgaaagaaggcttata 197  Q
    ||||||||||||||||||||| || ||| ||||| |||  ||||||||  || ||||    ||||||||||| ||||||||||||||| ||| |||||||    
T  9440484 cggctcttggcagcttctagggaagaccgaatcacatcggaatgagagggatcctgaagtcgtgcaggtatggaactgcatggttgaatgaaagcttata 9440385  T
Q  198 agaattgtttggtactacctatatcaacaagatgcat 234  Q
    ||||||||| |||||||| ||||||||||||||||||    
T  9440384 agaattgttcggtactacttatatcaacaagatgcat 9440348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 68 - 238
Target Start/End: Complemental strand, 23986522 - 23986352
Alignment:
Q  68 tggtcgccagtgtacaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggta 167  Q
    |||||| | ||| ||||| ||||||||| ||||||||  | ||||||||||   |||| ||||| |||  ||||||||  || | ||| | ||| |||||    
T  23986522 tggtcgtcggtgcacaaggcatgacaatgagcggctcccgacagcttctagaggaaccgaatcacatcggaatgagagggatccggaggccgtgtaggta 23986423  T
Q  168 tgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||  ||| |||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  23986422 tgggactacatggttgaaggtaggcttataagaattgtttggtactacctatatgaacaagatgcatcttc 23986352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 159 - 238
Target Start/End: Original strand, 7911910 - 7911989
Alignment:
Q  159 gtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||||||||||   |||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  7911910 gtgcaggtataggactgcatggttgaaggaaaacttataagaattgtttggtactacctatatcaacaagatgcatcttc 7911989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 163 - 230
Target Start/End: Complemental strand, 14771829 - 14771762
Alignment:
Q  163 aggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagat 230  Q
    |||||||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  14771829 aggtatgagactgcatggttgaaggaagacttataagaattgtttggtactacctatatcaacaagat 14771762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 172 - 238
Target Start/End: Complemental strand, 2681317 - 2681251
Alignment:
Q  172 actgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  2681317 actgcatggttgaatgaagacttataagaattgtttggtactacccatatcaacaagatgcatcttc 2681251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 159 - 229
Target Start/End: Complemental strand, 2720678 - 2720608
Alignment:
Q  159 gtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaaga 229  Q
    |||||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||||| |||||||    
T  2720678 gtgcaggtatgagactgcatggttgaaggaagacttataagaattgtttggtactacctatattaacaaga 2720608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 122 - 238
Target Start/End: Original strand, 20735690 - 20735806
Alignment:
Q  122 aaccaaatcatatcaaaatgagagaaattctgagactgtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatat 221  Q
    ||||| |||| |||| ||||||||  ||  |||||||||| |||||||  ||| |||| ||| | |||||||||||||||||||||| |||||| |||||    
T  20735690 aaccagatcacatcataatgagagggatcttgagactgtgtaggtatgtgactacatgattgtaggaaggcttataagaattgtttgatactacttatat 20735789  T
Q  222 caacaagatgcatcttc 238  Q
    |||||||||||||||||    
T  20735790 caacaagatgcatcttc 20735806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 159 - 234
Target Start/End: Original strand, 7912342 - 7912417
Alignment:
Q  159 gtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcat 234  Q
    |||||||||||  |||||||||||||| |||  |||||| ||||||||||||||||||||||||||||||||||||    
T  7912342 gtgcaggtatgggactgcatggttgaaggaaaacttatatgaattgtttggtactacctatatcaacaagatgcat 7912417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 159 - 238
Target Start/End: Original strand, 17851406 - 17851485
Alignment:
Q  159 gtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||||| |||||  ||||||||||| |||||||||||||||||  ||||||||||||||| ||||||||||||||||||||    
T  17851406 gtgcaagtatgggactgcatggttaaaagaaggcttataagatatgtttggtactacctttatcaacaagatgcatcttc 17851485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 176 - 238
Target Start/End: Original strand, 15929631 - 15929693
Alignment:
Q  176 catggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  15929631 catggttgaatgaaggcttataagaattatttggtactacctatatcaacaaaatgcatcttc 15929693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 163 - 237
Target Start/End: Complemental strand, 31821802 - 31821728
Alignment:
Q  163 aggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatctt 237  Q
    |||||||| ||| |||||||||| ||| ||||||||||||| |||||||||| ||||||||||||||||||||||    
T  31821802 aggtatgagactacatggttgaaggaatgcttataagaattatttggtactaactatatcaacaagatgcatctt 31821728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 162 - 230
Target Start/End: Complemental strand, 17731224 - 17731156
Alignment:
Q  162 caggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagat 230  Q
    ||||||||  ||||||||||| || |||| |||||||||||||||||||||||||||||||||||||||    
T  17731224 caggtatgggactgcatggttaaaggaagacttataagaattgtttggtactacctatatcaacaagat 17731156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 159 - 238
Target Start/End: Complemental strand, 2890953 - 2890874
Alignment:
Q  159 gtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||||||  |||||||||||||| ||||| |||||||||||||| || |||||||||||||| ||||||| |||||    
T  2890953 gtgcaggtatgggactgcatggttgaaggaaggtttataagaattgttagggactacctatatcaaaaagatgcttcttc 2890874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 163 - 238
Target Start/End: Original strand, 23776477 - 23776552
Alignment:
Q  163 aggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||  ||| |||||||||| |||| ||||||||||| || ||||||||||||||||||||||||||||||||    
T  23776477 aggtatgggactacatggttgaaggaagacttataagaatcgtctggtactacctatatcaacaagatgcatcttc 23776552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 161 - 238
Target Start/End: Original strand, 1991587 - 1991664
Alignment:
Q  161 gcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||||| ||| |||||||| ||||||||||| ||||||||||||||| ||| ||| | ||||||||||||||||    
T  1991587 gcaggtatgagactacatggttggaagaaggcttacaagaattgtttggtattacatatctaaacaagatgcatcttc 1991664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 164 - 237
Target Start/End: Original strand, 17205376 - 17205449
Alignment:
Q  164 ggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatctt 237  Q
    |||||||||||||||| ||||| ||||  ||||||||||||||||||||||||| || ||||||||| ||||||    
T  17205376 ggtatgaaactgcatgattgaatgaagaattataagaattgtttggtactacctttaccaacaagattcatctt 17205449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 159 - 234
Target Start/End: Complemental strand, 9440971 - 9440896
Alignment:
Q  159 gtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcat 234  Q
    ||||||| ||| |||| |||||||||| ||| ||||||||||||| ||||||||||| | ||||||||||||||||    
T  9440971 gtgcaggcatggaactacatggttgaaggaatgcttataagaattctttggtactacttttatcaacaagatgcat 9440896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 159 - 238
Target Start/End: Original strand, 17850950 - 17851029
Alignment:
Q  159 gtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||||| |||||  ||||||||||| |||||| ||| ||||||  ||||||||||||||| ||||||||||||||||||||    
T  17850950 gtgcaagtatgggactgcatggttaaaagaatgctgataagatatgtttggtactacctttatcaacaagatgcatcttc 17851029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 188 - 238
Target Start/End: Original strand, 13492393 - 13492443
Alignment:
Q  188 aaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  13492393 aaggcttataagaattgtttgatattacctatatcaacaagatgcatcttc 13492443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 172 - 238
Target Start/End: Original strand, 21311560 - 21311626
Alignment:
Q  172 actgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||||||||| |||| |||||||||||||||||||| |||||| || |||||||| |||||||    
T  21311560 actgcatggttgaaggaagccttataagaattgtttggtattacctagataaacaagatccatcttc 21311626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 237
Target Start/End: Complemental strand, 28065944 - 28065874
Alignment:
Q  167 atgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatctt 237  Q
    |||| |||| ||| ||||| ||| |||||||||||||||||||||||| || |||||||||||||||||||    
T  28065944 atgagactgtatgattgaatgaaagcttataagaattgtttggtactatctctatcaacaagatgcatctt 28065874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 159 - 216
Target Start/End: Complemental strand, 9440542 - 9440485
Alignment:
Q  159 gtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacc 216  Q
    |||||||||||  ||| |||||||||| ||||||||||||||||||||||||||||||    
T  9440542 gtgcaggtatgggacttcatggttgaatgaaggcttataagaattgtttggtactacc 9440485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 112 - 238
Target Start/End: Original strand, 12194315 - 12194439
Alignment:
Q  112 cttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggta 211  Q
    ||||||| |||||| ||||| ||   |||||||| ||| ||||||| |||||| |||||| ||||||| |||||  ||| ||||||| | || ||||| |    
T  12194315 cttctagtcaaaccgaatcacattggaatgagaggaatcctgagaccgtgcagatatgaa-ctgcatgattgaagaaagacttataa-atttttttggca 12194412  T
Q  212 ctacctatatcaacaagatgcatcttc 238  Q
    ||| |||||||||||||||||||||||    
T  12194413 ctatctatatcaacaagatgcatcttc 12194439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 235
Target Start/End: Original strand, 28583013 - 28583071
Alignment:
Q  177 atggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatc 235  Q
    ||||||||| ||||||||||||||||| |||| ||| | ||||||||||||||||||||    
T  28583013 atggttgaatgaaggcttataagaattatttgatacgatctatatcaacaagatgcatc 28583071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 175 - 229
Target Start/End: Complemental strand, 33775102 - 33775048
Alignment:
Q  175 gcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaaga 229  Q
    ||||||||||| ||||| ||||||||||||| |||| ||||||||||||||||||    
T  33775102 gcatggttgaaggaaggattataagaattgtctggtgctacctatatcaacaaga 33775048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 162 - 234
Target Start/End: Original strand, 20732613 - 20732685
Alignment:
Q  162 caggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcat 234  Q
    ||||||||  ||| |||||||| | ||||||||||||||||| ||||||||||||||||| || || ||||||    
T  20732613 caggtatgtgactacatggttgtaggaaggcttataagaattatttggtactacctatattaataatatgcat 20732685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 199
Target Start/End: Original strand, 3652920 - 3653051
Alignment:
Q  68 tggtcgccagtgtacaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggta 167  Q
    |||||||| ||| ||||| || |||||| ||||||||  | ||||||||||   |||| | ||| |||  ||||||||  || ||||| ||||| |||||    
T  3652920 tggtcgccggtgcacaaggcacgacaatgagcggctcccgacagcttctagatgaaccgactcacatcggaatgagagggatcctgaggctgtgtaggta 3653019  T
Q  168 tgaaactgcatggttgaaagaaggcttataag 199  Q
    ||  |||||||||||||| |||||||||||||    
T  3653020 tgggactgcatggttgaacgaaggcttataag 3653051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 234
Target Start/End: Original strand, 15929235 - 15929306
Alignment:
Q  163 aggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcat 234  Q
    |||||||| ||| || |||||||  || ||||||||||||||||||||| | |||||||||| |||||||||    
T  15929235 aggtatgagactacaaggttgaagaaaagcttataagaattgtttggtaatgcctatatcaataagatgcat 15929306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 237
Target Start/End: Complemental strand, 3885194 - 3885123
Alignment:
Q  166 tatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatctt 237  Q
    ||||| ||||||| |||||| ||| ||||| ||||||||||||||||||| ||||  ||||| || ||||||    
T  3885194 tatgagactgcatagttgaaggaatgcttaaaagaattgtttggtactacatatactaacaaaatacatctt 3885123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 224
Target Start/End: Original strand, 10964339 - 10964401
Alignment:
Q  162 caggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaa 224  Q
    ||||||||| |||| ||||| |||  ||| |||| ||||||||||||||||||| ||||||||    
T  10964339 caggtatgagactgtatggtagaagaaagacttacaagaattgtttggtactacatatatcaa 10964401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 75; Significance: 1e-34; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 68 - 238
Target Start/End: Original strand, 2189085 - 2189255
Alignment:
Q  68 tggtcgccagtgtacaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggta 167  Q
    |||||||| ||| ||||| || |||||| |||||||| || ||||||||||   |||| ||||| | |  ||||||||   | ||||| ||||||||||     
T  2189085 tggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaatcacaccggaatgagagggttcctgaggctgtgcaggtg 2189184  T
Q  168 tgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  2189185 tgggactgcatggttgaaagaaggcttataagaattgtttggcactacctatatcaacaagatgcatcttc 2189255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 151 - 238
Target Start/End: Original strand, 2193280 - 2193367
Alignment:
Q  151 ctgagactgtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||||||| |||||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2193280 ctgagaccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 2193367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 138 - 237
Target Start/End: Original strand, 25182372 - 25182471
Alignment:
Q  138 aatgagagaaattctgagactgtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatctt 237  Q
    ||||||||| || ||||||||||||| |||||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  25182372 aatgagagagatcctgagactgtgcaagtatgagactgcatggttgaaggaagacttataagaattgtttggtactacctatatcaacaagatacatctt 25182471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 109 - 238
Target Start/End: Original strand, 42515526 - 42515655
Alignment:
Q  109 cagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttg 208  Q
    |||||||||| | |||| ||||| |||| ||||||||  || ||||| | ||| |||||||| ||| |||||||||| ||||||||||||||| ||||||    
T  42515526 cagcttctagacgaaccgaatcacatcagaatgagagggatcctgaggccgtgtaggtatgagactacatggttgaaggaaggcttataagaagtgtttg 42515625  T
Q  209 gtactacctatatcaacaagatgcatcttc 238  Q
    ||||||||||||||||||||||||||||||    
T  42515626 gtactacctatatcaacaagatgcatcttc 42515655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 68 - 238
Target Start/End: Complemental strand, 6747803 - 6747633
Alignment:
Q  68 tggtcgccagtgtacaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggta 167  Q
    |||||||| ||| ||||| ||||||||| ||||||||  | || ||||||| ||| |  ||||| ||   ||||||||  || ||||| | ||| |||||    
T  6747803 tggtcgccggtgcacaaggcatgacaatgagcggctcccgacaacttctagacaagctgaatcacattggaatgagagggatcctgaggccgtgtaggta 6747704  T
Q  168 tgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||| ||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  6747703 tgatactacatggttgaaggaaggattataagaattgtttggtactacctatatcaacaagatgcatcttc 6747633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 111 - 238
Target Start/End: Complemental strand, 2941920 - 2941792
Alignment:
Q  111 gcttctaggcaaacca-aatcatatcaaaatgagagaaattctgagactgtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttgg 209  Q
    ||||||||||||| |  ||||| |||| ||||||||  || ||||| | || ||||||||  |||||||||||||| ||||||| |||||||||||||||    
T  2941920 gcttctaggcaaaactgaatcacatcagaatgagagggatcctgaggccgtacaggtatgggactgcatggttgaaggaaggctgataagaattgtttgg 2941821  T
Q  210 tactacctatatcaacaagatgcatcttc 238  Q
    |||||||||||||||||||||||||||||    
T  2941820 tactacctatatcaacaagatgcatcttc 2941792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 160 - 238
Target Start/End: Complemental strand, 13125249 - 13125171
Alignment:
Q  160 tgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  13125249 tgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatattaacaagatgcatcttc 13125171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 99 - 238
Target Start/End: Original strand, 9124929 - 9125070
Alignment:
Q  99 cggctcttggca-gcttctaggcaaacca-aatcatatcaaaatgagagaaattctgagactgtgcaggtatgaaactgcatggttgaaagaaggcttat 196  Q
    |||||| ||||| ||||||||||||| |  ||||| |||  ||||||||| ||  |||| | |||||||||||| |||| |||||| || ||| ||||||    
T  9124929 cggctcctggcatgcttctaggcaaaactgaatcacatcggaatgagagagatcttgaggccgtgcaggtatgagactgtatggttaaaggaaagcttat 9125028  T
Q  197 aagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  9125029 aagaattgtttggtactacctatatcaacaagatgcatcttc 9125070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 109 - 238
Target Start/End: Original strand, 46425723 - 46425852
Alignment:
Q  109 cagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttg 208  Q
    |||||||||| ||| || ||||| |||  ||||||||  || |||||||  || |||||||  ||| ||||||||||| |||||||||||||||||||||    
T  46425723 cagcttctagacaagccgaatcacatcggaatgagagggatcctgagaccatgtaggtatgggactacatggttgaaataaggcttataagaattgtttg 46425822  T
Q  209 gtactacctatatcaacaagatgcatcttc 238  Q
    ||| ||||||||||||||||||||||||||    
T  46425823 gtattacctatatcaacaagatgcatcttc 46425852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 138 - 238
Target Start/End: Complemental strand, 6719209 - 6719109
Alignment:
Q  138 aatgagagaaattctgagactgtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatctt 237  Q
    ||||||||  || ||||| ||||| |||||||  ||| |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  6719209 aatgagagggatcctgaggctgtgtaggtatgggactacatggttgaaggaatgcttataagaattgtttggtactacctatatcaacaagatgcatctt 6719110  T
Q  238 c 238  Q
    |    
T  6719109 c 6719109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 138 - 234
Target Start/End: Original strand, 42515103 - 42515199
Alignment:
Q  138 aatgagagaaattctgagactgtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcat 234  Q
    ||||||||  || ||||| | |||||||||||| |||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  42515103 aatgagagggatcctgaggccgtgcaggtatgagactgcatgattgaaggaagacttataagaattgtttggtactacctatatcaacaagatgcat 42515199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 152 - 227
Target Start/End: Complemental strand, 26957678 - 26957603
Alignment:
Q  152 tgagactgtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaa 227  Q
    |||| ||||| ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26957678 tgaggctgtgtaggtatggaactacatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaa 26957603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 99 - 236
Target Start/End: Complemental strand, 11517564 - 11517426
Alignment:
Q  99 cggctcttggca-gcttctaggcaaacca-aatcatatcaaaatgagagaaattctgagactgtgcaggtatgaaactgcatggttgaaagaaggcttat 196  Q
    |||||| ||||| ||||||||||||| |  ||||| |||  ||||||||  || ||||| | || ||||||||  |||||||||| ||| ||||||||||    
T  11517564 cggctcctggcatgcttctaggcaaaactgaatcacatcggaatgagagggatcctgaggccgtacaggtatgggactgcatggt-gaaggaaggcttat 11517466  T
Q  197 aagaattgtttggtactacctatatcaacaagatgcatct 236  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  11517465 aagaattgtttggtactacctatatcaacaagatgcatct 11517426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 159 - 238
Target Start/End: Complemental strand, 29357570 - 29357491
Alignment:
Q  159 gtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||||||  |||||||||||||| ||| | |||||||||||||||||||||| |||||||||||||||||||||||    
T  29357570 gtgcaggtatgggactgcatggttgaaggaatgtttataagaattgtttggtactaactatatcaacaagatgcatcttc 29357491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 163 - 238
Target Start/End: Original strand, 36422288 - 36422363
Alignment:
Q  163 aggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||  ||| |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  36422288 aggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttc 36422363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 176 - 238
Target Start/End: Original strand, 2465782 - 2465844
Alignment:
Q  176 catggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  2465782 catggttgaaggaaggcttataagagttgtttggtactacctatatcaacaagatgcatcttc 2465844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 162 - 238
Target Start/End: Original strand, 18833321 - 18833397
Alignment:
Q  162 caggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||| ||||||||||||||  ||| ||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  18833321 caggtatggaactgcatggttgagggaaagcttatatgaattgtttagtactacctatatcaacaagatgcatcttc 18833397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 178 - 234
Target Start/End: Complemental strand, 35527216 - 35527160
Alignment:
Q  178 tggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcat 234  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  35527216 tggttgaaagaaggcttataagaattgtttggtgctacctatatcaacaagatgcat 35527160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 163 - 238
Target Start/End: Original strand, 2465960 - 2466035
Alignment:
Q  163 aggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||  ||| |||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  2465960 aggtatgggactacatggttgaaggaaggcttataagagttgtttggtactacctatatcaacaagttgcatcttc 2466035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 163 - 238
Target Start/End: Original strand, 28495890 - 28495965
Alignment:
Q  163 aggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||  ||| |||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  28495890 aggtatgggactacatggttgaaggaaggcttataagaactgttgggtactacctatatcaacaagatgcatcttc 28495965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 163 - 238
Target Start/End: Complemental strand, 34405701 - 34405626
Alignment:
Q  163 aggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||  ||| |||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  34405701 aggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaggatgcatcttc 34405626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 159 - 237
Target Start/End: Complemental strand, 5406702 - 5406624
Alignment:
Q  159 gtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatctt 237  Q
    |||| ||||||  |||||||||||||| ||||  ||||||||||||||||||| |||||||||||||||||||||||||    
T  5406702 gtgccggtatgggactgcatggttgaaggaagatttataagaattgtttggtattacctatatcaacaagatgcatctt 5406624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 68 - 237
Target Start/End: Original strand, 43233354 - 43233523
Alignment:
Q  68 tggtcgccagtgtacaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggta 167  Q
    |||||||| ||| | ||| || |||||| |||||||| |  ||||||||||   |||| ||||| | | |||||||||  ||  |||| | ||| |||||    
T  43233354 tggtcgccggtgcataaggcacgacaatgagcggctcctaacagcttctagaggaaccgaatcacaccgaaatgagagggatcatgaggccgtgtaggta 43233453  T
Q  168 tgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatctt 237  Q
    ||  |||| |||||| || |||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  43233454 tgtgactgtatggttaaaggaagacttataagaattgtttggtactatctatatcaacaagatgcatctt 43233523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 163 - 238
Target Start/End: Complemental strand, 2611762 - 2611687
Alignment:
Q  163 aggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||| |||  ||||| ||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  2611762 aggtatgagactatatggtggaaggaaggcttataagaattgtttggtactatctataacaacaagatgcatcttc 2611687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 163 - 234
Target Start/End: Original strand, 11372487 - 11372558
Alignment:
Q  163 aggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcat 234  Q
    |||||||||| || ||||||||| ||||||||||||||||||||||||||||||| || ||||| |||||||    
T  11372487 aggtatgaaattgtatggttgaaggaaggcttataagaattgtttggtactacctgtaccaacatgatgcat 11372558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 167 - 238
Target Start/End: Complemental strand, 31743930 - 31743859
Alignment:
Q  167 atgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||| |||||||||||||| ||| |||||||||||| ||||||| ||| |||||||||||||||||||||||    
T  31743930 atgagactgcatggttgaaggaatgcttataagaatggtttggtgctatctatatcaacaagatgcatcttc 31743859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 163 - 238
Target Start/End: Complemental strand, 35474231 - 35474156
Alignment:
Q  163 aggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||| ||| ||||||||||  ||| |||||||||||||||| ||||||| ||||||||||||||||||||||    
T  35474231 aggtatgagactacatggttgaagaaagacttataagaattgtttagtactacttatatcaacaagatgcatcttc 35474156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 159 - 238
Target Start/End: Complemental strand, 36015525 - 36015446
Alignment:
Q  159 gtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||||| |||||| ||| |||||||||| ||| ||||| ||||||||||||||||||| |||||||||||||||| |||||    
T  36015525 gtgcaagtatgagactccatggttgaaggaaagcttaaaagaattgtttggtactacatatatcaacaagatgcctcttc 36015446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 176 - 238
Target Start/End: Complemental strand, 22529332 - 22529270
Alignment:
Q  176 catggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||||| ||||||||||||||| |||||||||||| |||||| ||||||||||||||||    
T  22529332 catggttgaaggaaggcttataagaaatgtttggtactatctatataaacaagatgcatcttc 22529270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 176 - 238
Target Start/End: Complemental strand, 29039117 - 29039055
Alignment:
Q  176 catggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||||| | ||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  29039117 catggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatcttc 29039055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 159 - 227
Target Start/End: Original strand, 6585640 - 6585708
Alignment:
Q  159 gtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaa 227  Q
    |||||| ||||| | |||||| |||||||||| ||||||| ||||||||||||||||||||||||||||    
T  6585640 gtgcagatatgagattgcatgattgaaagaagacttataaaaattgtttggtactacctatatcaacaa 6585708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 159 - 238
Target Start/End: Complemental strand, 26421874 - 26421795
Alignment:
Q  159 gtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||||| |||||| ||||||||||||||  |||||| |||||||||||| |||||| |||||| |||||||||| ||||||    
T  26421874 gtgcatgtatgagactgcatggttgaagtaaggctcataagaattgttaggtactccctataccaacaagatgaatcttc 26421795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 127 - 238
Target Start/End: Complemental strand, 31406730 - 31406619
Alignment:
Q  127 aatcatatcaaaatgagagaaattctgagactgtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaaca 226  Q
    ||||| |||||||||||||  || ||||  | |||||| | ||  |||| |||||||||||| | ||||| |||||||||||||  ||||||||||||||    
T  31406730 aatcacatcaaaatgagagggatcctgaagccgtgcagatctgggactgaatggttgaaagatgacttattagaattgtttggtgttacctatatcaaca 31406631  T
Q  227 agatgcatcttc 238  Q
    ||||||||||||    
T  31406630 agatgcatcttc 31406619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 176 - 234
Target Start/End: Original strand, 679866 - 679923
Alignment:
Q  176 catggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcat 234  Q
    ||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  679866 catggctgaaggaaggcttataagaattgtt-ggtactacctatatcaacaagatgcat 679923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 159 - 217
Target Start/End: Complemental strand, 13124815 - 13124757
Alignment:
Q  159 gtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacct 217  Q
    |||||||||||  |||||||||||||| ||||||||||||||||||| |||||||||||    
T  13124815 gtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtgtggtactacct 13124757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 176 - 238
Target Start/End: Original strand, 16192368 - 16192430
Alignment:
Q  176 catggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||| ||||| ||||| ||||||||||||||||||| |||||| |||||||||||||||||||    
T  16192368 catgattgaatgaaggattataagaattgtttggtattacctacatcaacaagatgcatcttc 16192430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 68 - 224
Target Start/End: Original strand, 2489979 - 2490136
Alignment:
Q  68 tggtcgccagtgtacaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaat-catatcaaaatgagagaaattctgagactgtgcaggt 166  Q
    |||||||| ||| ||||| ||||||||| ||||| || || || ||||||||  ||   ||| || ||| ||||||| |||||  ||||| |||||| ||    
T  2489979 tggtcgccggtgcacaaggcatgacaatgagcggttcctgacaacttctaggtgaattgaattcacatctaaatgagtgaaatcttgagattgtgcacgt 2490078  T
Q  167 atgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaa 224  Q
    |||  |||||||| ||||| ||| ||||||||||| |||||| |||||||||||||||    
T  2490079 atgtgactgcatgattgaaggaatgcttataagaagtgtttgttactacctatatcaa 2490136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 26421401 - 26421344
Alignment:
Q  177 atggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcat 234  Q
    ||||||||| |||| ||||||||||||| ||| |||||||||||||||||||||||||    
T  26421401 atggttgaaggaagacttataagaattgcttgatactacctatatcaacaagatgcat 26421344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 163 - 238
Target Start/End: Complemental strand, 28495718 - 28495643
Alignment:
Q  163 aggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||  ||| |||||||||| |||| |||||||||||||||  ||  ||||||||||||||||||||||||||    
T  28495718 aggtatgggactacatggttgaaggaagacttataagaattgttgagttttacctatatcaacaagatgcatcttc 28495643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 238
Target Start/End: Original strand, 37672192 - 37672271
Alignment:
Q  159 gtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||||| | |||||||||||| || |||| |||||| |||||||||||||||| | || |||||||||||| ||||    
T  37672192 gtgcaggtataagactgcatggttgcaaaaaggtttataataattgtttggtactacttgtaccaacaagatgcaacttc 37672271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 192 - 238
Target Start/End: Original strand, 9623273 - 9623319
Alignment:
Q  192 cttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||    
T  9623273 cttataagaattgtttgataccacctatatcaacaagatgcatcttc 9623319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 231
Target Start/End: Original strand, 33316681 - 33316832
Alignment:
Q  81 acaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatc-atatcaaaatgagagaaattctgagactgtgcaggtatgaaactgcatg 179  Q
    ||||| ||||||||  |||||||| || |||||||||| |||||  |||| | |||  ||||||| ||||| |||    |||||||||||| ||| ||||    
T  33316681 acaaggcatgacaacgagcggctcatgacagcttctagacaaactgaatccacatcggaatgagataaattttgatgtcgtgcaggtatgagactacatg 33316780  T
Q  180 gttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatg 231  Q
    |||||| |||   ||||||||||||||||  | ||| |||||||||||||||    
T  33316781 gttgaaggaaaaattataagaattgtttgacaatacttatatcaacaagatg 33316832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 174 - 238
Target Start/End: Original strand, 1628763 - 1628824
Alignment:
Q  174 tgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||||||||||||  |||||||||||   ||||||||||||| | |||||||||||||||||||||    
T  1628763 tgcatggttgaagaaaggcttataa---ttgtttggtactatcgatatcaacaagatgcatcttc 1628824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 219
Target Start/End: Complemental strand, 16811956 - 16811900
Alignment:
Q  163 aggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctat 219  Q
    |||||||| ||| |||||||||| ||| ||||||||||||||||| |||||| ||||    
T  16811956 aggtatgagactacatggttgaaggaatgcttataagaattgttttgtactatctat 16811900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 231
Target Start/End: Original strand, 20966087 - 20966155
Alignment:
Q  163 aggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatg 231  Q
    |||||||| |||||||| ||||| || | |||||||||||| ||| ||| |||||||| ||||||||||    
T  20966087 aggtatgagactgcatgattgaaggatgacttataagaattattttgtaatacctataccaacaagatg 20966155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 211
Target Start/End: Complemental strand, 3305522 - 3305374
Alignment:
Q  63 gagaatggtcgccagtgtacaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgc 162  Q
    |||| |||||||| ||| | ||| || |||||| ||| ||||  | ||||||||||   |||| ||||| ||| ||||||| |  || ||||| | |||     
T  3305522 gagagtggtcgccggtggataaggcacgacaatgagcagctcccgacagcttctagaggaaccgaatcacatcgaaatgagggggatcctgaggccgtgt 3305423  T
Q  163 aggtatgaaactgcatggttgaaagaaggcttataagaattgtttggta 211  Q
    | |||||  ||| |||||||||| |||||||||| ||||||||||||||    
T  3305422 aagtatgggactacatggttgaatgaaggcttatgagaattgtttggta 3305374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 231
Target Start/End: Original strand, 11372935 - 11373003
Alignment:
Q  163 aggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatg 231  Q
    |||||||| | |||||||||||| |||| ||| ||||||||||||  || || ||||| ||||||||||    
T  11372935 aggtatgagattgcatggttgaatgaagacttgtaagaattgtttcatagtatctataccaacaagatg 11373003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 73; Significance: 2e-33; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 70 - 238
Target Start/End: Original strand, 34867733 - 34867901
Alignment:
Q  70 gtcgccagtgtacaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggtatg 169  Q
    |||||| ||| ||||| || |||||| |||||||| || ||||||||||   |||| ||||| | |  ||||||||   | ||||| | |||||||||||    
T  34867733 gtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaagaaccgaatcacaccggaatgagagggttcctgaggccgtgcaggtatg 34867832  T
Q  170 aaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
      |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34867833 ggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 34867901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 159 - 238
Target Start/End: Original strand, 1821938 - 1822017
Alignment:
Q  159 gtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1821938 gtgcaggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 1822017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 63 - 238
Target Start/End: Complemental strand, 21886356 - 21886181
Alignment:
Q  63 gagaatggtcgccagtgtacaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgc 162  Q
    |||| |||||||| ||| ||||| || |||||| |||||||| ||| |||||||||   |||| ||||| | |  ||||||||   | |||||  |||||    
T  21886356 gagagtggtcgccggtgcacaaggcacgacaatgagcggctcctggtagcttctagaggaaccgaatcacaccggaatgagagggttcctgaggttgtgc 21886257  T
Q  163 aggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||  |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  21886256 aggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacatatatcaacaagatgcatcttc 21886181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 65 - 234
Target Start/End: Complemental strand, 20039682 - 20039513
Alignment:
Q  65 gaatggtcgccagtgtacaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgcag 164  Q
    ||||||||||| ||| ||||| ||||||||| ||| ||||  | |||||||||| |||||| ||||| |||  ||||||||  ||  |||| | ||| ||    
T  20039682 gaatggtcgccggtgcacaaggcatgacaatgagcagctcccgacagcttctagacaaaccgaatcacatcggaatgagagggatcatgaggccgtgtag 20039583  T
Q  165 gtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcat 234  Q
    ||||   ||| ||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  20039582 gtataggactacatagttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcat 20039513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 159 - 238
Target Start/End: Complemental strand, 8642148 - 8642069
Alignment:
Q  159 gtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||||||  |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  8642148 gtgcaggtatgggactgcatggttgaaggaaggcttataagaattatttggtactacctatatcaacaagatgcatcttc 8642069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 163 - 238
Target Start/End: Complemental strand, 10927513 - 10927438
Alignment:
Q  163 aggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10927513 aggtatgagactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 10927438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 159 - 238
Target Start/End: Original strand, 22556568 - 22556647
Alignment:
Q  159 gtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||||||  |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  22556568 gtgcaggtatgggactgcatggttgaaggaaggcttatatgaattgtttggtactacctatatcaacaagatgcatcttc 22556647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 162 - 238
Target Start/End: Original strand, 2473994 - 2474070
Alignment:
Q  162 caggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||| |||| |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  2473994 caggcatgagactgcatggttgaaggaaggcttataagaattgtttggtactgcctatatcaacaagatgcatcttc 2474070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 122 - 238
Target Start/End: Complemental strand, 10927097 - 10926981
Alignment:
Q  122 aaccaaatcatatcaaaatgagagaaattctgagactgtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatat 221  Q
    |||| ||||| |||| ||||||||  || |||||   ||| |||||||  ||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  10927097 aaccgaatcacatcagaatgagagggatcctgaggtcgtgtaggtatgggactacatggttgaaggaaggcttataagaattgtttggtactacctatat 10926998  T
Q  222 caacaagatgcatcttc 238  Q
    |||||||||||||||||    
T  10926997 caacaagatgcatcttc 10926981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 122 - 238
Target Start/End: Complemental strand, 17445606 - 17445490
Alignment:
Q  122 aaccaaatcatatcaaaatgagagaaattctgagactgtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatat 221  Q
    |||| ||||| ||| |||||||||  || ||||| | ||| ||| |||  ||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  17445606 aaccgaatcacatcgaaatgagagggatcctgaggccgtgtaggcatgggactacatggttgaaggaaggcttataagaattgtttggtactacctatat 17445507  T
Q  222 caacaagatgcatcttc 238  Q
    |||||||||||||||||    
T  17445506 caacaagatgcatcttc 17445490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 159 - 238
Target Start/End: Original strand, 22557001 - 22557080
Alignment:
Q  159 gtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||||||  |||||||||||||| ||||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  22557001 gtgcaggtatgggactgcatggttgaaggaaggcttatatgaattgtttggtactaccaatatcaacaagatgcatcttc 22557080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 172 - 238
Target Start/End: Original strand, 189113 - 189179
Alignment:
Q  172 actgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  189113 actgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgtatcttc 189179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 176 - 238
Target Start/End: Complemental strand, 42788743 - 42788681
Alignment:
Q  176 catggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  42788743 catggttgaaagaagacttataagaattgtttggtactacctatatcaacaagatgcatcttc 42788681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 163 - 238
Target Start/End: Original strand, 2193852 - 2193927
Alignment:
Q  163 aggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||  ||| |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  2193852 aggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttc 2193927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 172 - 238
Target Start/End: Original strand, 2474450 - 2474516
Alignment:
Q  172 actgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  2474450 actgcatggttgaaggaagacttaaaagaattgtttggtactacctatatcaacaagatgcatcttc 2474516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 176 - 238
Target Start/End: Complemental strand, 27646932 - 27646870
Alignment:
Q  176 catggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  27646932 catggttgaaggaaggcttataagaattgtttggtactacctataacaacaagatgcatcttc 27646870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 172 - 238
Target Start/End: Original strand, 34371657 - 34371723
Alignment:
Q  172 actgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  34371657 actgcatggttgaaggaatgcttaaaagaattgtttggtactacctatatcaacaagatgcatcttc 34371723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 162 - 238
Target Start/End: Complemental strand, 3887168 - 3887092
Alignment:
Q  162 caggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||||||||  |||||||||||||| |||| |||||| ||||| ||||||||||||||||||||||||||||||||||    
T  3887168 caggtatgggactgcatggttgaaggaagacttatatgaattatttggtactacctatatcaacaagatgcatcttc 3887092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 159 - 238
Target Start/End: Complemental strand, 18750310 - 18750231
Alignment:
Q  159 gtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||| || ||||||||||||||| ||||| |||||| ||||||||||||||||||||| ||| |||||||||||||    
T  18750310 gtgcaggtttggaactgcatggttgaaggaaggattataacaattgtttggtactacctataccaaaaagatgcatcttc 18750231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 172 - 238
Target Start/End: Complemental strand, 3886702 - 3886636
Alignment:
Q  172 actgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||||| ||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  3886702 actgcatggtagaaggaatgcttatatgaattgtttggtactacctatatcaacaagatgcatcttc 3886636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 176 - 238
Target Start/End: Original strand, 34372117 - 34372179
Alignment:
Q  176 catggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  34372117 catggttgaaggaatgcttaaaagaattgtttggtactacctatatcaacaagatgcatcttc 34372179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 68 - 238
Target Start/End: Complemental strand, 4658197 - 4658028
Alignment:
Q  68 tggtcgccagtgtacaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggta 167  Q
    |||||||||||| | ||  ||||||||| | || ||| || |||| |||||||||||  ||||| ||| |||| ||||  ||  ||| || |||||||||    
T  4658197 tggtcgccagtgcataatgcatgacaatgaccgactcctgacagcctctaggcaaactgaatcacatcgaaataagagggatcttgaaaccgtgcaggta 4658098  T
Q  168 tgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||| ||| |||||||||| ||||  |||||||| ||||||| ||||||||||| |||||| ||||||||||    
T  4658097 tgagacttcatggttgaacgaaga-ttataagacttgtttgatactacctataacaacaacatgcatcttc 4658028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 160 - 233
Target Start/End: Complemental strand, 2058769 - 2058696
Alignment:
Q  160 tgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgca 233  Q
    ||||| ||||| |||| ||| ||||| |||| |||||| |||||||||||||||||||||||||||||||||||    
T  2058769 tgcagctatgagactggatgattgaaggaagacttatatgaattgtttggtactacctatatcaacaagatgca 2058696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 121 - 238
Target Start/End: Complemental strand, 8391473 - 8391357
Alignment:
Q  121 aaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctata 220  Q
    ||||| ||||| |||  ||||||||  |||||||| | ||| ||| |||| ||| |||| ||||| |||| |||||||||||||||||||||| ||| ||    
T  8391473 aaaccgaatcacatcggaatgagagggattctgaggccgtgtaggcatgagactacatgattgaaggaagacttataagaattgtttggtact-cctgta 8391375  T
Q  221 tcaacaagatgcatcttc 238  Q
    ||||||||||||||||||    
T  8391374 tcaacaagatgcatcttc 8391357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 177 - 238
Target Start/End: Complemental strand, 24182341 - 24182280
Alignment:
Q  177 atggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||||||||| ||||||||||||||||| |||||||||| ||||| |||||||||||||||||    
T  24182341 atggttgaaggaaggcttataagaattatttggtactatctataccaacaagatgcatcttc 24182280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 121 - 238
Target Start/End: Complemental strand, 30719957 - 30719840
Alignment:
Q  121 aaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctata 220  Q
    ||||| ||||| |||| ||||||||  || |||||  |||||| |||||  ||  ||| |||||| ||||||||||| ||||||||||||||||||||||    
T  30719957 aaaccgaatcacatcagaatgagagggatcctgaggttgtgcaagtatgggacatcattgttgaaggaaggcttatatgaattgtttggtactacctata 30719858  T
Q  221 tcaacaagatgcatcttc 238  Q
      ||||||||||||||||    
T  30719857 aaaacaagatgcatcttc 30719840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 163 - 234
Target Start/End: Complemental strand, 11160791 - 11160720
Alignment:
Q  163 aggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcat 234  Q
    |||||||| ||| ||| |||||| |||||||||||| ||||||||||||||| |||| ||||||||||||||    
T  11160791 aggtatgacactacatagttgaaggaaggcttataataattgtttggtactatctatgtcaacaagatgcat 11160720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 163 - 238
Target Start/End: Complemental strand, 16370818 - 16370743
Alignment:
Q  163 aggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||| | |||||||||||||| |||  |||||||||||||||||||||||| ||||||||||||| | ||||||    
T  16370818 aggtataagactgcatggttgaaggaaaacttataagaattgtttggtactacttatatcaacaagacgtatcttc 16370743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 71 - 238
Target Start/End: Original strand, 39146883 - 39147050
Alignment:
Q  71 tcgccagtgtacaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggtatga 170  Q
    ||||| ||| ||||| || |||||| |||||||| || || |||||||   |||  ||||| ||| |||||||||  ||  |||| | ||| |||||||     
T  39146883 tcgccggtgcacaaggcacgacaatgagcggctcctgacaacttctagaggaactgaatcacatcgaaatgagagggatcatgaggccgtgtaggtatgg 39146982  T
Q  171 aactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
     ||| |||||||||| | || ||||||||||||||||| |||||| ||||| ||||||||||||||||    
T  39146983 gactacatggttgaaggtagacttataagaattgtttgatactacttatattaacaagatgcatcttc 39147050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 68 - 234
Target Start/End: Complemental strand, 5067095 - 5066930
Alignment:
Q  68 tggtcgccagtgtacaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggta 167  Q
    |||||||| |||  |||||||  ||||| ||||||||| | || ||||||| |||| | ||||| | || ||||||||| || | ||| | ||||| |||    
T  5067095 tggtcgccggtgcgcaagacacaacaatgagcggctctcg-caacttctagacaaatcgaatcacaccagaatgagagagatcccgaggccgtgcatgta 5066997  T
Q  168 tgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcat 234  Q
    ||| |||| ||| || || |||  |||||||||||||||||||| || |||||||||||||||||||    
T  5066996 tgagactgtatgattaaaggaaaacttataagaattgtttggtattatctatatcaacaagatgcat 5066930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 163 - 237
Target Start/End: Complemental strand, 32574767 - 32574694
Alignment:
Q  163 aggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatctt 237  Q
    |||||||| |||||| |||| |||||||||||||| ||||||||||||||||||||||  ||||| |||||||||    
T  32574767 aggtatgagactgcacggtt-aaagaaggcttataggaattgtttggtactacctatacaaacaaaatgcatctt 32574694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 71 - 234
Target Start/End: Original strand, 18304375 - 18304538
Alignment:
Q  71 tcgccagtgtacaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggtatga 170  Q
    ||||| ||| |||||||| |||||| ||||||||  | |||||||||| | |||||||||| | |  |||||||   || |||||   ||| |||||||     
T  18304375 tcgccggtgcacaagacacgacaatgagcggctcccgacagcttctagacgaaccaaatcacaacggaatgagaaggatcctgaggtcgtgtaggtatgg 18304474  T
Q  171 aactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcat 234  Q
     ||| ||||| |||   || |||||||  |||||||||||||||||||||||||||||||||||    
T  18304475 gactacatggatgatgaaaagcttatataaattgtttggtactacctatatcaacaagatgcat 18304538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 81 - 215
Target Start/End: Original strand, 4102767 - 4102895
Alignment:
Q  81 acaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggtatgaaactgcatgg 180  Q
    ||||| ||||| |||  ||||||| | ||||||||||||||| | || ||| |||  ||||||||  ||||||| || |||||||||||| ||||         
T  4102767 acaaggcatgataatatgcggctcctcgcagcttctaggcaatcgaa-tcacatctgaatgagagggattctgataccgtgcaggtatgagactg----- 4102860  T
Q  181 ttgaaagaaggcttataagaattgtttggtactac 215  Q
    ||||||||| |||||||||||||||||||||||||    
T  4102861 ttgaaagaatgcttataagaattgtttggtactac 4102895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 234
Target Start/End: Original strand, 42429194 - 42429252
Alignment:
Q  176 catggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcat 234  Q
    |||||||||| || | |||||||||||||||||||||||||| ||||||||| ||||||    
T  42429194 catggttgaaggaggacttataagaattgtttggtactacctttatcaacaatatgcat 42429252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 238
Target Start/End: Complemental strand, 30684708 - 30684591
Alignment:
Q  121 aaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctata 220  Q
    ||||||||||| |||  |||||| |  || |||||  |||||| ||||| |||  ||| |||||| | ||||||||| |||||||||||||||| |||||    
T  30684708 aaaccaaatcacatcggaatgagggggatcctgaggttgtgcaagtatggaacatcattgttgaagggaggcttatatgaattgtttggtactatctata 30684609  T
Q  221 tcaacaagatgcatcttc 238  Q
      ||||||||||||||||    
T  30684608 aaaacaagatgcatcttc 30684591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 238
Target Start/End: Complemental strand, 15513129 - 15513047
Alignment:
Q  157 ctgtgcaggtatgaaactgcatggttgaaagaag--gcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||||| |||||||  ||| |||||||||| |||   |||||||||||||||| ||||||||| |||||||||||||||||||||    
T  15513129 ctgtgtaggtatgggactacatggttgaaggaatatgcttataagaattgtt-ggtactaccaatatcaacaagatgcatcttc 15513047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 158 - 237
Target Start/End: Complemental strand, 39801578 - 39801498
Alignment:
Q  158 tgtgcaggtatgaaactgcatggttgaaagaaggctta-taagaattgtttggtactacctatatcaacaagatgcatctt 237  Q
    |||||| |||||| |||  |||||| ||||||| |||  ||| ||| ||||||||||||||||||||||||||||||||||    
T  39801578 tgtgcaagtatgagactatatggttaaaagaagactttctaaaaatcgtttggtactacctatatcaacaagatgcatctt 39801498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 238
Target Start/End: Complemental strand, 43356824 - 43356655
Alignment:
Q  68 tggtcgccagtgtacaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaat-catatcaaaatgagagaaattctgagactgtgcaggt 166  Q
    |||||||| ||| ||| |||||| |||| |||||||| |||| | |||||||| ||| |||| || |||  ||||||||   | ||||||   |||||||    
T  43356824 tggtcgccggtgcacatgacatggcaatgagcggctcctggcggtttctaggcgaactaaattcacatcggaatgagaggg-tcctgagatcatgcaggt 43356726  T
Q  167 atgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||| |||||||| ||||  || | ||||||||||||||||||||| ||||| | |||||| ||||||||||    
T  43356725 atgagactgcatgattgag-gatgacttataagaattgtttggtacaacctaaaccaacaatatgcatcttc 43356655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 188 - 238
Target Start/End: Complemental strand, 20858626 - 20858576
Alignment:
Q  188 aaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||||||||||||||||||| |  ||||||||||||||||| |||||    
T  20858626 aaggcttataagaattgtttggtattttctatatcaacaagatgcttcttc 20858576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 207
Target Start/End: Complemental strand, 22975184 - 22975076
Alignment:
Q  101 gctcttggca-gcttctaggcaaacca-aatcatatcaaaatgagagaaattctgagactgtgcaggtatgaaactgcatggttgaaagaaggcttataa 198  Q
    |||||||||| ||||||||||||| |  ||||| |||  ||||||||  || ||||| | |||||||||||  ||||||||||||||  || ||||||||    
T  22975184 gctcttggcatgcttctaggcaaaactgaatcacatcggaatgagagggatcctgaggccgtgcaggtatgtgactgcatggttgaagaaaagcttataa 22975085  T
Q  199 gaattgttt 207  Q
    |||||||||    
T  22975084 gaattgttt 22975076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 234
Target Start/End: Complemental strand, 4673573 - 4673510
Alignment:
Q  171 aactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcat 234  Q
    |||| |||| ||||| |||| |||||||||||| |||||||  |||| ||||||||||||||||    
T  4673573 aactacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcat 4673510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0499 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0499
Description:

Target: scaffold0499; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 159 - 238
Target Start/End: Complemental strand, 2165 - 2086
Alignment:
Q  159 gtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2165 gtgcaggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 2086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 3e-32; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 68 - 238
Target Start/End: Original strand, 33174899 - 33175069
Alignment:
Q  68 tggtcgccagtgtacaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggta 167  Q
    |||||||| ||| ||||| ||||||||| || |||||  | || ||||||| ||| || ||||| |||  ||||||||  || ||||| | ||| |||||    
T  33174899 tggtcgccggtgcacaaggcatgacaatgagtggctcccgacaacttctagacaagccgaatcacatcggaatgagagggatcctgaggccgtgtaggta 33174998  T
Q  168 tgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||  ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33174999 tgggactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 33175069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 159 - 238
Target Start/End: Original strand, 41754321 - 41754400
Alignment:
Q  159 gtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  41754321 gtgcaggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactatctatatcaacaagatgcatcttc 41754400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 162 - 238
Target Start/End: Original strand, 30966269 - 30966345
Alignment:
Q  162 caggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30966269 caggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 30966345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 151 - 238
Target Start/End: Original strand, 1707065 - 1707152
Alignment:
Q  151 ctgagactgtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||||||||||| |||||||| ||| |||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  1707065 ctgagactgtgtaggtatgagactacatgattgaaggaagacttataagaattgtttggtactacctatatcaacaagatgcatcttc 1707152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 159 - 238
Target Start/End: Complemental strand, 25338111 - 25338032
Alignment:
Q  159 gtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||||||  |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  25338111 gtgcaggtatgggactgcatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttc 25338032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 138 - 238
Target Start/End: Complemental strand, 18099013 - 18098913
Alignment:
Q  138 aatgagagaaattctgagactgtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatctt 237  Q
    |||||||| ||| ||||| | ||| |||||||| ||| |||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||||    
T  18099013 aatgagaggaatcctgaggccgtgtaggtatgagactacatggttgaagggatgcttataagaattgtttggtactacctatatcaacaagatgcatctt 18098914  T
Q  238 c 238  Q
    |    
T  18098913 c 18098913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 159 - 238
Target Start/End: Original strand, 1953187 - 1953266
Alignment:
Q  159 gtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||||||| |||||||||||||| |||| | |||||||||||||||||||||||||||||||| ||||||||||||    
T  1953187 gtgcaggtatgagactgcatggttgaaggaagacctataagaattgtttggtactacctatatcaactagatgcatcttc 1953266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 159 - 238
Target Start/End: Original strand, 16379425 - 16379504
Alignment:
Q  159 gtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||||||  |||||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||||    
T  16379425 gtgcaggtatgggactgcatggttgaaggaagacttatacgaattgtttggtactacctatatcaacaagatgcatcttc 16379504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 172 - 238
Target Start/End: Original strand, 30966735 - 30966801
Alignment:
Q  172 actgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  30966735 actgcatggttgaaggaaggattataagaattgtttggtactacctatatcaacaagatgcatcttc 30966801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 100 - 237
Target Start/End: Original strand, 82991 - 83127
Alignment:
Q  100 ggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggtatgaaactgcatggttgaaagaaggcttataag 199  Q
    ||||| ||||||||||||||||| |  |||||  || |||||||||  || |||||| ||||||||||||| ||| |||||||||| | | |||||||||    
T  82991 ggctcctggcagcttctaggcaa-ctgaatcacgtcgaaatgagagggatcctgagattgtgcaggtatgagactacatggttgaaggtatgcttataag 83089  T
Q  200 aattgtttggtactacctatatcaacaagatgcatctt 237  Q
    ||| ||||||||||||||||| |||||||||| |||||    
T  83090 aatcgtttggtactacctataccaacaagatgaatctt 83127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 138 - 238
Target Start/End: Original strand, 16378948 - 16379048
Alignment:
Q  138 aatgagagaaattctgagactgtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatctt 237  Q
    ||||||||  |||| ||| | ||||| |||||| |||||||||||||| |||| |||||| |||||||||| ||||||||||||||||||||||||||||    
T  16378948 aatgagagggattccgaggccgtgcaagtatgagactgcatggttgaaggaagtcttatacgaattgtttgatactacctatatcaacaagatgcatctt 16379047  T
Q  238 c 238  Q
    |    
T  16379048 c 16379048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 87 - 238
Target Start/End: Original strand, 33174465 - 33174614
Alignment:
Q  87 catgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggtatgaaactgcatggttgaaa 186  Q
    ||||||||| ||||||||  | |||||||||| | |||| ||||| |||  ||||||||  || ||||  | ||| |||||||  ||| ||  ||||||     
T  33174465 catgacaatgagcggctcccgacagcttctagacgaaccgaatcacatcggaatgagagggatcctgatgccgtgtaggtatgggactaca--gttgaag 33174562  T
Q  187 gaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33174563 gaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 33174614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 163 - 238
Target Start/End: Original strand, 1912561 - 1912636
Alignment:
Q  163 aggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||| ||| |||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  1912561 aggtatgagactacatggttgaaagtagatttataagaattgtttggtactacctatatcaacaagatgcatcttc 1912636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 163 - 238
Target Start/End: Original strand, 8256562 - 8256637
Alignment:
Q  163 aggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||  ||| |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  8256562 aggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttc 8256637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 138 - 237
Target Start/End: Original strand, 24818337 - 24818436
Alignment:
Q  138 aatgagagaaattctgagactgtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatctt 237  Q
    ||||||||  || ||||| | ||||| |||||  ||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  24818337 aatgagagggatcctgaggccgtgcatgtatgggactgcatggttcaaggaaggcttataagaattgtttagtactacctatatcaacaagatgcatctt 24818436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 163 - 238
Target Start/End: Original strand, 33771037 - 33771112
Alignment:
Q  163 aggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||  |||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33771037 aggtatgggactgcagggttgaagaaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 33771112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 72 - 236
Target Start/End: Complemental strand, 25434257 - 25434093
Alignment:
Q  72 cgccagtgtacaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggtatgaa 171  Q
    |||| ||| ||||| || |||||| |||||||| || |||||||||  | |||| ||||| | |  ||||||||  || ||||| | |||| ||||||      
T  25434257 cgccggtgcacaaggcacgacaatgagcggctcctgacagcttctaaacgaaccgaatcacaccggaatgagagggatcctgaggccgtgctggtatggg 25434158  T
Q  172 actgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatct 236  Q
    ||| |||||||||| |||||||||||||||||||||| ||| |||| ||||||||||||||||||    
T  25434157 acttcatggttgaaggaaggcttataagaattgtttgatacaacctttatcaacaagatgcatct 25434093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 138 - 238
Target Start/End: Complemental strand, 29259755 - 29259655
Alignment:
Q  138 aatgagagaaattctgagactgtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatctt 237  Q
    ||||||||  || ||||||| || || |||||  |||||||||||||| |||||||||| | |||||||||||||||| |||||||||||||||||||||    
T  29259755 aatgagagggatcctgagaccgtacaagtatgggactgcatggttgaaggaaggcttattaaaattgtttggtactacatatatcaacaagatgcatctt 29259656  T
Q  238 c 238  Q
    |    
T  29259655 c 29259655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 159 - 238
Target Start/End: Original strand, 15619930 - 15620009
Alignment:
Q  159 gtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||||| |||||| ||||||| |||||| | | |||||||||||||||||||||||||||||||||||||||| |||||||    
T  15619930 gtgcaagtatgagactgcatagttgaaggcaagcttataagaattgtttggtactacctatatcaacaagatacatcttc 15620009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 163 - 238
Target Start/End: Original strand, 29804718 - 29804793
Alignment:
Q  163 aggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||  ||| |||||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  29804718 aggtatgggactacatggttgaaggcaggcttataagaattgttgggtactacctatatcaacaagatgcatcttc 29804793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 174 - 237
Target Start/End: Complemental strand, 30963362 - 30963299
Alignment:
Q  174 tgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatctt 237  Q
    |||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  30963362 tgcatgattgaaggaaggcttataagaattgttaggtactacctatatcaacaagatgcatctt 30963299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 159 - 237
Target Start/End: Original strand, 20502055 - 20502133
Alignment:
Q  159 gtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatctt 237  Q
    ||||| |||||  |||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||| ||||    
T  20502055 gtgcaagtatgggactgcatggttgaaggaaggcttataagaattgtttggtactttctatatcaacaagatgcttctt 20502133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 68 - 238
Target Start/End: Complemental strand, 27883131 - 27882961
Alignment:
Q  68 tggtcgccagtgtacaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggta 167  Q
    |||||||| ||| ||||| || |||||| ||||||||  | ||| |||||  |  ||| ||||| | | |||||||||  || ||||| | ||||| |||    
T  27883131 tggtcgccggtgcacaaggcacgacaatgagcggctcccgtcagattctacacgtaccgaatcacaccgaaatgagagggatcctgaggccgtgcatgta 27883032  T
Q  168 tgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||| ||||||| |||||| ||| ||||||||||||||||||||| || ||||||||| |||||||||||||    
T  27883031 tgagactgcattgttgaaggaatgcttataagaattgtttggtattatctatatcaataagatgcatcttc 27882961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 5399901 - 5399852
Alignment:
Q  189 aggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5399901 aggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 5399852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 163 - 238
Target Start/End: Original strand, 11388224 - 11388298
Alignment:
Q  163 aggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||| ||| |||||||||| ||| ||||| || |||||||||||||||||||||||||||||||||||||||    
T  11388224 aggtatgagactacatggttgaaggaatgcttaaaa-aattgtttggtactacctatatcaacaagatgcatcttc 11388298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 163 - 238
Target Start/End: Original strand, 11394571 - 11394645
Alignment:
Q  163 aggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||| ||| |||||||||| ||| ||||| || |||||||||||||||||||||||||||||||||||||||    
T  11394571 aggtatgagactacatggttgaaggaatgcttaaaa-aattgtttggtactacctatatcaacaagatgcatcttc 11394645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 163 - 238
Target Start/End: Original strand, 13191010 - 13191085
Alignment:
Q  163 aggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||| | ||||||||||| || |||| |||||||||||||||||||||||| |||| |||||||||||||||||    
T  13191010 aggtataagactgcatggttcaaggaagacttataagaattgtttggtactacatataccaacaagatgcatcttc 13191085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 159 - 238
Target Start/End: Complemental strand, 30963834 - 30963755
Alignment:
Q  159 gtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||||||||| || | |||||||||||| |||  |||||||||||||| |||| |||||||||||||||||||||||||||    
T  30963834 gtgcaggtaagagaatgcatggttgaaggaaaacttataagaattgtatggttctacctatatcaacaagatgcatcttc 30963755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 163 - 234
Target Start/End: Complemental strand, 38899022 - 38898951
Alignment:
Q  163 aggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcat 234  Q
    |||||| | ||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||    
T  38899022 aggtatcagactacatggttgaaggagagcttataagaattgtttggtactacctatatcaacaagatgcat 38898951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 157 - 237
Target Start/End: Original strand, 16542015 - 16542095
Alignment:
Q  157 ctgtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatctt 237  Q
    ||||| ||||||||  || |||||||||| |||| ||||||| |||||||| ||||||||||||||||||||||| |||||    
T  16542015 ctgtgtaggtatgactctacatggttgaaggaagacttataataattgttttgtactacctatatcaacaagatgtatctt 16542095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 179 - 238
Target Start/End: Original strand, 8073944 - 8074003
Alignment:
Q  179 ggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||||||| | || ||||||||||||||||||||||||||||| |||||||||||||||||    
T  8073944 ggttgaagggagacttataagaattgtttggtactacctataccaacaagatgcatcttc 8074003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 163 - 237
Target Start/End: Complemental strand, 18448028 - 18447954
Alignment:
Q  163 aggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatctt 237  Q
    |||||||  ||| ||||||||||  ||| |||||||||||||||||||||||| | |||||||||||||||||||    
T  18448028 aggtatgtgactacatggttgaagtaagacttataagaattgtttggtactacttgtatcaacaagatgcatctt 18447954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 8181446 - 8181394
Alignment:
Q  178 tggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagat 230  Q
    |||||||| |||| ||| |||||||||||||||||||||||||||||||||||    
T  8181446 tggttgaaggaagacttttaagaattgtttggtactacctatatcaacaagat 8181394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 178 - 238
Target Start/End: Complemental strand, 36924519 - 36924457
Alignment:
Q  178 tggttgaaagaaggcttataagaattgtttggtactac--ctatatcaacaagatgcatcttc 238  Q
    |||||||| ||||||||||||||||||||||||| |||   ||||||||||||||||||||||    
T  36924519 tggttgaaggaaggcttataagaattgtttggtattacttatatatcaacaagatgcatcttc 36924457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 174 - 238
Target Start/End: Original strand, 15639781 - 15639845
Alignment:
Q  174 tgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||||| |||||| | | ||||||| ||||||||||||||||||||||||||||| || |||||||    
T  15639781 tgcatagttgaaggcacgcttataggaattgtttggtactacctatatcaacaacatacatcttc 15639845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 187 - 234
Target Start/End: Complemental strand, 30961969 - 30961922
Alignment:
Q  187 gaaggcttataagaattgtttggtactacctatatcaacaagatgcat 234  Q
    |||| ||||||||| ||| |||||||||||||||||||||||||||||    
T  30961969 gaagtcttataagatttgattggtactacctatatcaacaagatgcat 30961922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 187 - 238
Target Start/End: Complemental strand, 26864902 - 26864851
Alignment:
Q  187 gaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||| |||||| | |||||||||||||| ||| |||||||||||||||    
T  26864902 gaaggcttgtaagaactctttggtactacctacatcgacaagatgcatcttc 26864851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 220
Target Start/End: Original strand, 37552521 - 37552660
Alignment:
Q  81 acaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaat-catatcaaaatgagagaaattctgagactgtgcaggtatgaaactgcatg 179  Q
    ||||||||||| ||| ||||||||  |  ||||||||||  |||||||| || || | |||||||| | | |||||||  |||| |||||  ||||||||    
T  37552521 acaagacatgataatgagcggctccagatagcttctaggagaaccaaattcacattagaatgagaggattcctgagaccatgcaagtatgggactgcatg 37552620  T
Q  180 gttgaaagaaggcttataagaattgtttggtactacctata 220  Q
    ||  || || | |||||||||||||||||||||||| ||||    
T  37552621 gtcaaacga-gacttataagaattgtttggtactacatata 37552660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 159 - 238
Target Start/End: Original strand, 23705 - 23784
Alignment:
Q  159 gtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23705 gtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 23784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 2e-30; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 159 - 238
Target Start/End: Original strand, 28561778 - 28561857
Alignment:
Q  159 gtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28561778 gtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 28561857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 159 - 238
Target Start/End: Complemental strand, 31284390 - 31284311
Alignment:
Q  159 gtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31284390 gtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 31284311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 88 - 238
Target Start/End: Complemental strand, 32797120 - 32796970
Alignment:
Q  88 atgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggtatgaaactgcatggttgaaag 187  Q
    |||||||| | ||||||  | |||||||||| ||| || ||||| ||| |||| ||||  || |||||||  || |||||||||||| ||||||||||      
T  32797120 atgacaatgaacggctcccgacagcttctagacaagccgaatcacatcgaaataagagggatcctgagaccatgtaggtatgaaactacatggttgaagc 32797021  T
Q  188 aaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  32797020 aagacttataagaattgtttggtactacctatatcaacaagatgcatcttc 32796970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 159 - 238
Target Start/End: Original strand, 7493913 - 7493992
Alignment:
Q  159 gtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  7493913 gtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatgcatcttc 7493992  T

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Target: chr3; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 63 - 238
Target Start/End: Original strand, 39640873 - 39641048
Alignment:
Q  63 gagaatggtcgccagtgtacaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgc 162  Q
    |||| |||||| | ||| ||||||||||||||| | ||||||  | |||||| |||   || | ||||| |||| ||||||||| || ||||| | |||     
T  39640873 gagagtggtcgtcggtgcacaagacatgacaatgaacggctcccgacagcttttagaagaatcgaatcacatcagaatgagagagatcctgaggccgtgt 39640972  T
Q  163 aggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||| ||| |||||||||| |||| ||||||||| ||||||||||||||||||||||| |||||||||||||    
T  39640973 aggtatgagactacatggttgaaggaagacttataagagttgtttggtactacctatatcaataagatgcatcttc 39641048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 138 - 238
Target Start/End: Original strand, 30529698 - 30529798
Alignment:
Q  138 aatgagagaaattctgagactgtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatctt 237  Q
    ||||||||  || ||||| ||||| |||||||| ||| ||||||||||  |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  30529698 aatgagagggatcctgaggctgtgtaggtatgagactacatggttgaagtaaggcttataagaattttttggtactacctatatcaacaagatgcatctt 30529797  T
Q  238 c 238  Q
    |    
T  30529798 c 30529798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 159 - 238
Target Start/End: Original strand, 7477223 - 7477302
Alignment:
Q  159 gtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||| |||||||    
T  7477223 gtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatcttc 7477302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 159 - 238
Target Start/End: Complemental strand, 32386848 - 32386769
Alignment:
Q  159 gtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||||||  |||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  32386848 gtgcaggtatgggactgtatggttgaaggaaggcttataagaattgtttggtactacctatattaacaagatgcatcttc 32386769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 68 - 238
Target Start/End: Original strand, 39653105 - 39653275
Alignment:
Q  68 tggtcgccagtgtacaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggta 167  Q
    |||||||| ||| ||||| || |||||| |||||||| || ||||||||||   |||  ||||| | |  ||||||||   | ||||| | |||||||||    
T  39653105 tggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaactgaatcacaccggaatgagagggttcctgaggccgtgcaggta 39653204  T
Q  168 tgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||  |||||||||||||| ||| |||||||||||||||| | |||||||||||||||||||||||||||||    
T  39653205 tgggactgcatggttgaaggaaagcttataagaattgttggatactacctatatcaacaagatgcatcttc 39653275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 138 - 238
Target Start/End: Original strand, 25248122 - 25248222
Alignment:
Q  138 aatgagagaaattctgagactgtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatctt 237  Q
    ||||||||  ||||| || | |||||||||||  ||||||||||| || ||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  25248122 aatgagagggattctaaggccgtgcaggtatgggactgcatggttaaaggaatgtttataagaattgtttggtactacctatatcaacaagatgcatctt 25248221  T
Q  238 c 238  Q
    |    
T  25248222 c 25248222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 138 - 238
Target Start/End: Complemental strand, 27187465 - 27187365
Alignment:
Q  138 aatgagagaaattctgagactgtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatctt 237  Q
    ||||||||  || ||||| ||||||| |||||  ||||||||||| || |||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  27187465 aatgagagggatcctgaggctgtgcatgtatgggactgcatggttaaatgaaggcttataagaattgtttggtactacctatatcactaagatgcatctt 27187366  T
Q  238 c 238  Q
    |    
T  27187365 c 27187365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 162 - 238
Target Start/End: Original strand, 41472336 - 41472411
Alignment:
Q  162 caggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||||||||| |||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  41472336 caggtatgagactgcatggttgaaggaag-cttataagaattgtttggtactacatatatcaacaagatgcatcttc 41472411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 163 - 238
Target Start/End: Complemental strand, 11180144 - 11180069
Alignment:
Q  163 aggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||  ||| |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  11180144 aggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttc 11180069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 163 - 238
Target Start/End: Original strand, 14813985 - 14814060
Alignment:
Q  163 aggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||| ||||||||||| || |||||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  14813985 aggtatgagactgcatggttaaaggaaggcttataataattgtttggtactacctatatcaataagatgcatcttc 14814060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 163 - 234
Target Start/End: Complemental strand, 25230815 - 25230744
Alignment:
Q  163 aggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcat 234  Q
    |||||||| ||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  25230815 aggtatgagactacatggttgaaggaaggtttataagaattgtttggtactacctatatcaacaagatgcat 25230744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 163 - 234
Target Start/End: Complemental strand, 25238402 - 25238331
Alignment:
Q  163 aggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcat 234  Q
    |||||||| ||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  25238402 aggtatgagactacatggttgaaggaaggtttataagaattgtttggtactacctatatcaacaagatgcat 25238331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 176 - 238
Target Start/End: Complemental strand, 13150651 - 13150589
Alignment:
Q  176 catggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  13150651 catggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttc 13150589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 68 - 238
Target Start/End: Original strand, 16811322 - 16811492
Alignment:
Q  68 tggtcgccagtgtacaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggta 167  Q
    |||||||| ||| ||||| || |||||| ||||||||  | ||||||||||   || | ||||| |||  ||||||||  || ||||| | ||| ||||     
T  16811322 tggtcgccggtgcacaaggcacgacaatgagcggctcccgacagcttctagaggaatcgaatcacatcggaatgagagggatcctgaggccgtgtaggtt 16811421  T
Q  168 tgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||  ||| |||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  16811422 tgggactccatggttgaaggaaggcttataagaattgttgggtactacctatttcaacaagatgcatcttc 16811492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 165 - 238
Target Start/End: Original strand, 50347784 - 50347857
Alignment:
Q  165 gtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||| ||| | |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  50347784 gtatgagactacttggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttc 50347857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 166 - 238
Target Start/End: Original strand, 29224363 - 29224435
Alignment:
Q  166 tatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||||| |||||||||||||| |||| |||||||||||||||||||||||||||||  ||||||||||||||||    
T  29224363 tatgagactgcatggttgaaggaagacttataagaattgtttggtactacctatactaacaagatgcatcttc 29224435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 163 - 238
Target Start/End: Complemental strand, 13150209 - 13150134
Alignment:
Q  163 aggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||  ||| |||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  13150209 aggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctgtatcaacaagatgcatcttc 13150134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 163 - 238
Target Start/End: Complemental strand, 20885227 - 20885152
Alignment:
Q  163 aggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||  ||| |||||||||| |||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  20885227 aggtatgtgactacatggttgaaggaagacttataagaattgtttgatactacctatatcaacaagatgcatcttc 20885152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 163 - 238
Target Start/End: Complemental strand, 25230358 - 25230283
Alignment:
Q  163 aggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||  ||| |||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||    
T  25230358 aggtatgggactacatggttgaaggaaggcttataagaattatttggtactacctatatcaacaagatacatcttc 25230283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 163 - 238
Target Start/End: Complemental strand, 25237945 - 25237870
Alignment:
Q  163 aggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||  ||| |||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||    
T  25237945 aggtatgggactacatggttgaaggaaggcttataagaattatttggtactacctatatcaacaagatacatcttc 25237870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 163 - 238
Target Start/End: Complemental strand, 25802658 - 25802583
Alignment:
Q  163 aggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||| ||||||||||| |  ||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  25802658 aggtatgagactgcatggttaacggaaggctgataagaatggtttggtactacctatatcaacaagatgcatcttc 25802583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 163 - 238
Target Start/End: Complemental strand, 32227331 - 32227256
Alignment:
Q  163 aggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||  ||| |||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  32227331 aggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatattaacaagatgcatcttc 32227256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 163 - 238
Target Start/End: Original strand, 32227536 - 32227611
Alignment:
Q  163 aggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||  ||| |||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  32227536 aggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatattaacaagatgcatcttc 32227611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 159 - 237
Target Start/End: Original strand, 8067312 - 8067390
Alignment:
Q  159 gtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatctt 237  Q
    |||||||||||  | |||||||||||| |  |||||||||||||||||| |||||||||||||||||||||||||||||    
T  8067312 gtgcaggtatgggattgcatggttgaaggccggcttataagaattgtttagtactacctatatcaacaagatgcatctt 8067390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 177 - 238
Target Start/End: Complemental strand, 25239173 - 25239112
Alignment:
Q  177 atggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  25239173 atggttgaaggaacgcttataagaattttttggtactacctatatcaacaagatgcatcttc 25239112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 179 - 238
Target Start/End: Complemental strand, 4067454 - 4067395
Alignment:
Q  179 ggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  4067454 ggttgaaggaagacttataaaaattgtttggtactacctatatcaacaagatgcatcttc 4067395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 167 - 238
Target Start/End: Complemental strand, 25238790 - 25238719
Alignment:
Q  167 atgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||| ||| |||||||||| |||| ||||||||||||||||||||||| || ||||||||||||||||||||    
T  25238790 atgagactacatggttgaaggaagacttataagaattgtttggtactatctttatcaacaagatgcatcttc 25238719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 187 - 237
Target Start/End: Original strand, 14820214 - 14820264
Alignment:
Q  187 gaaggcttataagaattgtttggtactacctatatcaacaagatgcatctt 237  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  14820214 gaaggcttataagaattgtttggtactacttatatcaacaagatgcatctt 14820264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 68 - 234
Target Start/End: Original strand, 2911036 - 2911202
Alignment:
Q  68 tggtcgccagtgtacaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatcatatcaaaatgagagaaattctgagactgtgcaggta 167  Q
    |||||||| ||| |||||||| || ||| ||||| || |  |||||||||| | |||| ||||| | |  ||||||||  || | ||| | |||||||||    
T  2911036 tggtcgccggtgcacaagacacgataataagcggatcctaacagcttctagacgaaccgaatcacacctgaatgagagggatcccgaggccgtgcaggta 2911135  T
Q  168 tgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcat 234  Q
    ||  ||  |||||||||||||| | |||||| ||||||||| || ||||||||||||||||||||||    
T  2911136 tgggaccacatggttgaaagaatggttataaaaattgtttgatattacctatatcaacaagatgcat 2911202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 172 - 238
Target Start/End: Original strand, 16810970 - 16811036
Alignment:
Q  172 actgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||||||||  ||||||||||||||||||||  |||||| ||||||| |||||||||||||||    
T  16810970 actgcatggttgatggaaggcttataagaattgttgcgtactaactatatctacaagatgcatcttc 16811036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 182 - 238
Target Start/End: Original strand, 37045090 - 37045146
Alignment:
Q  182 tgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||| ||| ||||||||||||||||||||| |||||||||||||||| |||||||||    
T  37045090 tgaaggaatgcttataagaattgtttggtaatacctatatcaacaaggtgcatcttc 37045146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 163 - 238
Target Start/End: Complemental strand, 25803114 - 25803039
Alignment:
Q  163 aggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||  ||||||||||||||  ||| ||| |||||||||||||||||||||||||  ||||||||| ||||||    
T  25803114 aggtatgggactgcatggttgaagtaagacttgtaagaattgtttggtactacctataaaaacaagatgtatcttc 25803039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 162 - 234
Target Start/End: Complemental strand, 31104071 - 31103999
Alignment:
Q  162 caggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcat 234  Q
    ||||||||| | ||||||||| || |||| ||||||||||||||||| ||||| ||||| |||| ||||||||    
T  31104071 caggtatgagattgcatggttcaaggaagacttataagaattgtttgatactatctataccaactagatgcat 31103999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 162 - 230
Target Start/End: Original strand, 41474032 - 41474100
Alignment:
Q  162 caggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagat 230  Q
    ||||||||  |||| |||||| || |||| ||||||||||||||||| |||| ||||||||||||||||    
T  41474032 caggtatgtgactggatggttaaaggaagacttataagaattgtttgatacttcctatatcaacaagat 41474100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 195 - 237
Target Start/End: Original strand, 3890046 - 3890088
Alignment:
Q  195 ataagaattgtttggtactacctatatcaacaagatgcatctt 237  Q
    |||||||||||||| |||||| |||||||||||||||||||||    
T  3890046 ataagaattgtttgctactacatatatcaacaagatgcatctt 3890088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 195 - 237
Target Start/End: Original strand, 3899868 - 3899910
Alignment:
Q  195 ataagaattgtttggtactacctatatcaacaagatgcatctt 237  Q
    ||||||||||||||||||||| |||| ||||||||||||||||    
T  3899868 ataagaattgtttggtactacatataccaacaagatgcatctt 3899910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 234
Target Start/End: Complemental strand, 47518430 - 47518358
Alignment:
Q  162 caggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcat 234  Q
    |||||||| || |||||||||||| |||  |||||||||||||||||  |||| || || |||||||||||||    
T  47518430 caggtatggaattgcatggttgaaggaaaacttataagaattgtttgaaactatctctaccaacaagatgcat 47518358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 232
Target Start/End: Original strand, 15392568 - 15392615
Alignment:
Q  185 aagaaggcttataagaattgtttggtactacctatatcaacaagatgc 232  Q
    ||||||||||||||||||||||||||| ||||  || |||||||||||    
T  15392568 aagaaggcttataagaattgtttggtattaccggtaccaacaagatgc 15392615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 232
Target Start/End: Original strand, 15405604 - 15405651
Alignment:
Q  185 aagaaggcttataagaattgtttggtactacctatatcaacaagatgc 232  Q
    ||||||||||||||||||||||||||| ||||  || |||||||||||    
T  15405604 aagaaggcttataagaattgtttggtattaccggtaccaacaagatgc 15405651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 232
Target Start/End: Original strand, 15411013 - 15411060
Alignment:
Q  185 aagaaggcttataagaattgtttggtactacctatatcaacaagatgc 232  Q
    ||||||||||||||||||||||||||| ||||  || |||||||||||    
T  15411013 aagaaggcttataagaattgtttggtattaccggtaccaacaagatgc 15411060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 232
Target Start/End: Original strand, 15417429 - 15417476
Alignment:
Q  185 aagaaggcttataagaattgtttggtactacctatatcaacaagatgc 232  Q
    ||||||||||||||||||||||||||| ||||  || |||||||||||    
T  15417429 aagaaggcttataagaattgtttggtattaccggtaccaacaagatgc 15417476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 238
Target Start/End: Complemental strand, 26310088 - 26310024
Alignment:
Q  174 tgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||||||| || |  ||||||||||| |||| |||||| |||| ||| |||||||||||||    
T  26310088 tgcatggttgaaggacgatttataagaattttttgttactacatataccaaaaagatgcatcttc 26310024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 111 - 238
Target Start/End: Original strand, 105703 - 105831
Alignment:
Q  111 gcttctaggcaaacc-aaatcatatcaaaatgagagaaattctgagactgtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttgg 209  Q
    ||||||||||||| | |||||| |||  ||||||||  || ||||| | || |||||||| ||||||| ||||||| |||||||||||||||||||||||    
T  105703 gcttctaggcaaaactaaatcacatcggaatgagagggatcctgaggccgtacaggtatggaactgcagggttgaaggaaggcttataagaattgtttgg 105802  T
Q  210 tactacctatatcaacaagatgcatcttc 238  Q
    |||||||||||||||||| ||||||||||    
T  105803 tactacctatatcaacaaaatgcatcttc 105831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 159 - 238
Target Start/End: Original strand, 18998 - 19077
Alignment:
Q  159 gtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  18998 gtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagattcatcttc 19077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 159 - 238
Target Start/End: Complemental strand, 2324 - 2245
Alignment:
Q  159 gtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||||||  ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2324 gtgcaggtatgggactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 2245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 160 - 238
Target Start/End: Original strand, 1253 - 1331
Alignment:
Q  160 tgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  1253 tgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatataaacaagatgcatcttc 1331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 138 - 238
Target Start/End: Complemental strand, 107598 - 107498
Alignment:
Q  138 aatgagagaaattctgagactgtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatctt 237  Q
    ||||||||  |||||||| | || ||||||||  |||||||||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  107598 aatgagagggattctgaggccgtacaggtatgggactgcatggttgaaggaaggcttataagaattgtttgatactaccaatatcaacaagatgcatctt 107499  T
Q  238 c 238  Q
    |    
T  107498 c 107498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 160 - 238
Target Start/End: Original strand, 4594 - 4672
Alignment:
Q  160 tgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||||||||||  |||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  4594 tgcaggtatgggactgcatggttgaaggaaggtttagaagaattgtttggtactacctatatcaacaagatgcatcttc 4672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 238
Target Start/End: Original strand, 5049 - 5132
Alignment:
Q  160 tgcaggtatgaaactgcatggttgaaagaaggctt-----ataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||||||||||  |||||||||||||| ||||| ||     | ||||||||||||||||||||||||| ||||||||||||||||    
T  5049 tgcaggtatgggactgcatggttgaaggaaggtttaaaagagaagaattgtttggtactacctatattaacaagatgcatcttc 5132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 57; Significance: 7e-24; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 133 - 237
Target Start/End: Complemental strand, 69955 - 69851
Alignment:
Q  133 atcaaaatgagagaaattctgagactgtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgc 232  Q
    |||| ||||||||  || || ||||| ||||||||||| ||||||| |||||| ||| |||||||| ||||||||||||||||||||||||||| |||||    
T  69955 atcataatgagagggatcctaagactatgcaggtatgagactgcatcgttgaaggaatgcttataataattgtttggtactacctatatcaacatgatgc 69856  T
Q  233 atctt 237  Q
    |||||    
T  69855 atctt 69851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 162 - 238
Target Start/End: Complemental strand, 162789 - 162713
Alignment:
Q  162 caggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    ||||||||  |||||||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  162789 caggtatgtgactgcatggttgaaggaagacttataagaattgtttggtactacctatattaacaagatgcatcttc 162713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 138 - 238
Target Start/End: Complemental strand, 142409 - 142309
Alignment:
Q  138 aatgagagaaattctgagactgtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatctt 237  Q
    ||||||||  || ||||| | |||||||||||  ||| |||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  142409 aatgagagggatcctgaggccgtgcaggtatgggacttcatggttgaaggaatgtttataagaattgtttggtactacctatatcaacaagatgcatctt 142310  T
Q  238 c 238  Q
    |    
T  142309 c 142309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 159 - 238
Target Start/End: Complemental strand, 4096 - 4017
Alignment:
Q  159 gtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||||||  ||||||| |||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  4096 gtgcaggtatgggactgcattgttgaaggaatgcttataagaattgtttggtactacctgtatcaacaagatgcatcttc 4017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 127 - 234
Target Start/End: Original strand, 2742 - 2849
Alignment:
Q  127 aatcatatcaaaatgagagaaattctgagactgtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaaca 226  Q
    ||||| ||| |||||||||  || ||||| | ||| |||||||  ||| |||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  2742 aatcacatcgaaatgagagggatcctgaggccgtgtaggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaaca 2841  T
Q  227 agatgcat 234  Q
    ||||||||    
T  2842 agatgcat 2849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 138 - 237
Target Start/End: Original strand, 10311 - 10410
Alignment:
Q  138 aatgagagaaattctgagactgtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatctt 237  Q
    ||||||||  || ||||| | ||||| |||||  ||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  10311 aatgagagggatcctgaggccgtgcatgtatgggactgcatggttcaaggaaggcttataagaattgtttagtactacctatatcaacaagatgcatctt 10410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 163 - 238
Target Start/End: Original strand, 245122 - 245197
Alignment:
Q  163 aggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||  ||| |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  245122 aggtatgggactacatggttgaagggaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 245197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 163 - 238
Target Start/End: Original strand, 245551 - 245626
Alignment:
Q  163 aggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||  ||| |||||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  245551 aggtatgggacttcatggttgaagggatgcttataagaattgtttggtactacctatatcaacaagatgcatcttc 245626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0557 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0557
Description:

Target: scaffold0557; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 171 - 238
Target Start/End: Original strand, 2149 - 2216
Alignment:
Q  171 aactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||| |||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  2149 aactacatggttgaaggaaggcttataagaattgtttggtactccctatataaacaagatgcatcttc 2216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 163 - 238
Target Start/End: Original strand, 154793 - 154868
Alignment:
Q  163 aggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||||||  ||| |||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  154793 aggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctgtatcaacaagatgcatcttc 154868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 133 - 238
Target Start/End: Complemental strand, 17738 - 17633
Alignment:
Q  133 atcaaaatgagagaaattctgagactgtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgc 232  Q
    |||| ||||||||  || ||||| | ||| |||||||  ||| |||||||||| ||| |||||||||||||||||||||||||||||||||||| ||||     
T  17738 atcagaatgagagggatcctgaggccgtgtaggtatgggactacatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaggatgt 17639  T
Q  233 atcttc 238  Q
    ||||||    
T  17638 atcttc 17633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 18269 - 18170
Alignment:
Q  138 aatgagagaaattctgagactgtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatctt 237  Q
    ||||||||  || ||||| | ||| |||||||  ||| ||| |||||| |||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  18269 aatgagagggatcctgaggccgtgtaggtatgtgactacatagttgaaggaagacttataagaattgtttgatactacctatatcaacaagatgcatctt 18170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 45439 - 45499
Alignment:
Q  180 gttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcat 240  Q
    |||||| |||| ||||| |||||| ||||||||||||||||||||||||||| ||||||||    
T  45439 gttgaaggaagacttatgagaattatttggtactacctatatcaacaagatgtatcttcat 45499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 180 - 235
Target Start/End: Original strand, 14794 - 14849
Alignment:
Q  180 gttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatc 235  Q
    |||||| ||| ||||||||||||||||||||| |||||||||||| ||||||||||    
T  14794 gttgaaggaatgcttataagaattgtttggtaatacctatatcaataagatgcatc 14849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 81 - 238
Target Start/End: Original strand, 26023 - 26181
Alignment:
Q  81 acaagacatgacaatcagcggctcttggcagcttctaggcaaaccaaatc-atatcaaaatgagagaaattctgagactgtgcaggtatgaaactgcatg 179  Q
    |||| |||||||||| |||||||| || |||||| ||||| |||| |||  | |||| || |||||  || || || | |||||||| ||| ||| ||||    
T  26023 acaatacatgacaatgagcggctcctgacagcttataggcgaaccgaatttacatcagaaagagagggatcctaaggccgtgcaggtgtgagacttcatg 26122  T
Q  180 gttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 238  Q
    |||| |  | ||||||||  |||| ||||||||||| |||||||||| |||||||||||    
T  26123 gttgcataatggcttatacaaattttttggtactacatatatcaacatgatgcatcttc 26181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 237
Target Start/End: Original strand, 16072 - 16146
Alignment:
Q  163 aggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatctt 237  Q
    |||||||| | ||||| |||||| || | ||| ||||||||||||||| ||| ||||||||||| ||||| ||||    
T  16072 aggtatgagattgcatagttgaatgatgacttgtaagaattgtttggtgctatctatatcaacatgatgcctctt 16146  T

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Target: scaffold1126 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1126
Description:

Target: scaffold1126; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 208
Target Start/End: Complemental strand, 1037 - 981
Alignment:
Q  152 tgagactgtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttg 208  Q
    |||||| |||||| ||||| ||||||||||||||||||| ||||||| |||| ||||    
T  1037 tgagacagtgcagatatgagactgcatggttgaaagaagacttataataattttttg 981  T

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Target: scaffold0071 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 232
Target Start/End: Complemental strand, 44809 - 44762
Alignment:
Q  185 aagaaggcttataagaattgtttggtactacctatatcaacaagatgc 232  Q
    ||||||||||||||||||||||||||| ||||  || |||||||||||    
T  44809 aagaaggcttataagaattgtttggtattaccggtaccaacaagatgc 44762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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