View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4086_low_5 (Length: 540)
Name: NF4086_low_5
Description: NF4086
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4086_low_5 |
 | |
|
Alignment Details
Target: chr6 (Bit Score: 336; Significance: 0; HSPs: 25)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 336; E-Value: 0
Query Start/End: Original strand, 1 - 523
Target Start/End: Original strand, 14027122 - 14027629
Alignment:
| Q |
1 |
ttccaagttgagatggaatgcttccttccaaataattgttgctgagatcaagaaattgcaagttggagagatctccaagtcgttgaggaatcacaccatc |
100 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| | |||||||||| |||||| |
|
|
| T |
14027122 |
ttccaagttgacatggaatgcttccttccaaataattgtggctgagatcaagaaattgcaagttggagagacctccaagttgatgaggaatcaaaccatc |
14027221 |
T |
|
| Q |
101 |
tagatgattgttggaaagattcaagtatttcaaatgtgaaagagactccaattgaataggaatttgtcctcgaaaataagaatatgaaagatcaaggtat |
200 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||| |
|
|
| T |
14027222 |
tagaagattgttggaaagattcaagtatttcaaatgtgaaagagactccaattgaataggaatttgtcctccaaaatgacaatatgaaagatcaaggtat |
14027321 |
T |
|
| Q |
201 |
cttaggtttcttaaagatccaaagaaacctggtatagaattgccttgaaaattatttctactgaggttcaaatattgtaattgttgcaactccatcagag |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
14027322 |
cttaggtttcttaaagatccaaagaaacctagtatagaattgccttcaaaattatttctactgaggttcaaatattgtaattgttgcaactccatcaatg |
14027421 |
T |
|
| Q |
301 |
acttgtggatatcaccgctgatataaaacttattgccatcataaccttcaagataattataatcataattataattataatcaccatgaaggtcgagcat |
400 |
Q |
| |
|
|||||||||||||||| |||||||| | ||||| || | ||| || |||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
14027422 |
acttgtggatatcaccactgatatagtaattatt------attgtcatcattattattata---------ataataataatcaccatgaaggtcgagcat |
14027506 |
T |
|
| Q |
401 |
aagcacatggccagtgatgttgtggcaaccaattccataccattggcagcaatcttcagttgtccaggatgacaacatgccaaatttgtcaacaaggcca |
500 |
Q |
| |
|
||| |||||||||||||| ||| |||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
14027507 |
aagtacatggccagtgatattgctgcaaccaattccataccattcgcagcaatcttctgttgtccaagatgacaacatgccaaatttgtcaacaaggcca |
14027606 |
T |
|
| Q |
501 |
aacttgaattgcaggagtgcctg |
523 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
14027607 |
aacttgaattgcaggagtgcctg |
14027629 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 1 - 324
Target Start/End: Original strand, 13943025 - 13943348
Alignment:
| Q |
1 |
ttccaagttgagatggaatgcttccttccaaataattgttgctgagatcaagaaattgcaagttggagagatctccaagtcgttgaggaatcacaccatc |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| |
|
|
| T |
13943025 |
ttccaagttgagatggaatgcttccttccaaataattgttgctgagatcaagaaattgcaagttggagagatctccaagtcgatgaggaatcaaaccatc |
13943124 |
T |
|
| Q |
101 |
tagatgattgttggaaagattcaagtatttcaaatgtgaaagagactccaattgaataggaatttgtcctcgaaaataagaatatgaaagatcaaggtat |
200 |
Q |
| |
|
|||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
13943125 |
tagaagattgtaggaaagattcaagtatttcaaatgtgaaagagactccaattgaataggaatttgtcctcgaaaataacaatatgaaagatcaaggtat |
13943224 |
T |
|
| Q |
201 |
cttaggtttcttaaagatccaaagaaacctggtatagaattgccttgaaaattatttctactgaggttcaaatattgtaattgttgcaactccatcagag |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||| | |
|
|
| T |
13943225 |
cttaggtttcttaaagatccaaagaaacctggtatagaattgccttcaaaattatttctactgaagttcaaatattgtaactgttgcaactccatcagtg |
13943324 |
T |
|
| Q |
301 |
acttgtggatatcaccgctgatat |
324 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
13943325 |
acttgtggatatcaccgctgatat |
13943348 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 1 - 292
Target Start/End: Original strand, 14017134 - 14017425
Alignment:
| Q |
1 |
ttccaagttgagatggaatgcttccttccaaataattgttgctgagatcaagaaattgcaagttggagagatctccaagtcgttgaggaatcacaccatc |
100 |
Q |
| |
|
||||||||||||||||||||||||| ||||||| |||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
14017134 |
ttccaagttgagatggaatgcttccatccaaatcattggtgttgagatcaagaaattgcaagttggagagatctccaagtcgatgaggaatcacaccatc |
14017233 |
T |
|
| Q |
101 |
tagatgattgttggaaagattcaagtatttcaaatgtgaaagagactccaattgaataggaatttgtcctcgaaaataagaatatgaaagatcaaggtat |
200 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || || || |||||||||||||||| |
|
|
| T |
14017234 |
tagatgattgttggaaagatccaagtatttcaaatgtgaaagagactccaattgaataggaatttgtcctccaagattgcaaattgaaagatcaaggtat |
14017333 |
T |
|
| Q |
201 |
cttaggtttcttaaagatccaaagaaacctggtatagaattgccttgaaaattatttctactgaggttcaaatattgtaattgttgcaactc |
292 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
14017334 |
cttaggtttcttaaagatccaaagaaacctggtatagaattgccttcaaaattaattctactgaagttcaaatattgtaattgttgcaactc |
14017425 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 482
Target Start/End: Original strand, 14086646 - 14087130
Alignment:
| Q |
1 |
ttccaagttgagatggaatgcttccttccaaataattgttgctgagatcaagaaattgcaagttggagagatctccaagtcgttgaggaatcacaccatc |
100 |
Q |
| |
|
||||||||||| ||||||| ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||||| |
|
|
| T |
14086646 |
ttccaagttgatatggaatacttccttccaagtcattgttgctgagatcaagaaattgcaagttggagagatctccaagttgatgaggaatcaaaccatc |
14086745 |
T |
|
| Q |
101 |
tagatgattgttggaaagattcaagtatttcaaatgtgaaagagactccaattgaataggaatttg---tcctcgaaaataagaatatgaaagatcaagg |
197 |
Q |
| |
|
||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||| |
|
|
| T |
14086746 |
tagataattccatgaaagattcaagtatttcaaatgcaaaagagactccaattgaataggaatttgatctccttcaaaattgcaatatgaaagatcaagg |
14086845 |
T |
|
| Q |
198 |
tatcttaggtttcttaaagatccaaagaaacctggtatagaattgccttgaaaattatttctactgaggttcaaatattgtaattgttgcaactccatca |
297 |
Q |
| |
|
|||||||||||||| | |||||||||||||| ||| ||| |||||||||||||| ||||||||| |||||||| || | ||||| |||||||||||||| |
|
|
| T |
14086846 |
tatcttaggtttctcagagatccaaagaaacttgggatatgattgccttgaaaatcatttctacttaggttcaagtactttaatttttgcaactccatca |
14086945 |
T |
|
| Q |
298 |
gagacttgtggatatcaccgctgatataaaacttattgccatcataaccttcaagataattataatca---taattataattataatcaccatgaaggtc |
394 |
Q |
| |
|
| || |||||||||||||| | |||| |||| |||| ||| | ||| | | ||||| ||||| | |||| ||||| ||||| ||||||||||| |
|
|
| T |
14086946 |
gtgagttgtggatatcaccccggatacaaaatctattcccacc---accgtaataataataataataaaggtaatcataatcataattaccatgaaggtt |
14087042 |
T |
|
| Q |
395 |
gagcataagcacatggccagtgatgttgtggcaaccaattccataccattggcagcaatcttcagttgtccaggatgacaacatgcca |
482 |
Q |
| |
|
||||||||| ||||||||||||| ||||| |||||||||||| | |||||||||||||||||| || ||||| ||||||| ||||||| |
|
|
| T |
14087043 |
gagcataagtacatggccagtgaggttgttgcaaccaattcccttccattggcagcaatcttctgtcgtccaagatgacagcatgcca |
14087130 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 523
Target Start/End: Complemental strand, 13470942 - 13470438
Alignment:
| Q |
1 |
ttccaagttgagatggaatgcttccttccaaataattgttgctgagatcaagaaattgcaagttggagagatctccaagtcgttgaggaatcacaccatc |
100 |
Q |
| |
|
|||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |
|
|
| T |
13470942 |
ttccaagttgagttggaatgcttccttccaaacgattgttcctgagatcaagaaattgcaagttggagagatctccaagtcgatgaggaataacaccatc |
13470843 |
T |
|
| Q |
101 |
tagatgattgttggaaagattcaagtatttcaaatgtgaaagagactccaattgaataggaatttgtcctcgaaaataagaatatgaaagatcaaggtat |
200 |
Q |
| |
|
|||| | ||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| || || || |||||||||||||||| |
|
|
| T |
13470842 |
tagacggttgtttgaaagattcaagtatttcaaatgagaaagagactcgaattgaataggaatttgtcctccaagattgcaacctgaaagatcaaggtat |
13470743 |
T |
|
| Q |
201 |
cttaggtttcttaaagatccaaagaaacctggtatagaattgccttgaaaattatttctactgaggttcaaatattgtaattgttgcaactccatcagag |
300 |
Q |
| |
|
||||||||||||| ||||||||||| || | | ||| ||||||||| ||||||||||| || ||||||||||| | |||||| ||||||||||||| | |
|
|
| T |
13470742 |
cttaggtttcttagagatccaaagatacttaggatataattgccttcaaaattatttccaccaaggttcaaatactttaattgctgcaactccatcaatg |
13470643 |
T |
|
| Q |
301 |
acttgtggatatcaccgctgatataaaacttattgccatcataaccttcaagataattataatcataattataattataatcaccatgaaggtcgagcat |
400 |
Q |
| |
|
|||||||||||||||| || |||||||| ||||||||||||| |||||| || ||||||| |||| |||||||||| |||||| |
|
|
| T |
13470642 |
acttgtggatatcaccactcatataaaatttattgccatcat---------tataattgta---------ataattaaaatctccatgaaggttgagcat |
13470561 |
T |
|
| Q |
401 |
aagcacatggccagtgatgttgtggcaaccaattccataccattggcagcaatcttcagttgtccaggatgacaacatgccaaatttgtcaacaaggcca |
500 |
Q |
| |
|
|| ||||| |||||| |||| |||||||||||| | |||||||||||||||||| || ||||| ||||||||||||||| | | |||| |||| || |
|
|
| T |
13470560 |
aattacatgatcagtgaggttgctgcaaccaattcccttccattggcagcaatcttctgtcgtccaagatgacaacatgccatagtcatcaataagggca |
13470461 |
T |
|
| Q |
501 |
aacttgaattgcaggagtgcctg |
523 |
Q |
| |
|
||||||||| || |||||||| |
|
|
| T |
13470460 |
gccttgaattgaagaagtgcctg |
13470438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 328
Target Start/End: Original strand, 14112530 - 14112857
Alignment:
| Q |
1 |
ttccaagttgagatggaatgcttccttccaaataattgttgctgagatcaagaaattgcaagttggagagatctccaagtcgttgaggaatcacaccatc |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |
|
|
| T |
14112530 |
ttccaagttgagatggaatgcttccttccaaaccattattgttgagatcaagaaattgcaagttggagagatctccaagtcgattaggaatcacaccatc |
14112629 |
T |
|
| Q |
101 |
tagatgattgttggaaagattcaagtatttcaaatgtgaaagagactccaattgaataggaatttgtcctcgaaaataagaatatgaaagatcaaggtat |
200 |
Q |
| |
|
|||| |||||||||||||||| | |||||||||||||||||||||| ||||| ||||||||||| |||| | ||||||| ||| |||||||||||||| | |
|
|
| T |
14112630 |
tagacgattgttggaaagatttatgtatttcaaatgtgaaagagaccccaatggaataggaattcgtccgccaaaataacaatttgaaagatcaaggttt |
14112729 |
T |
|
| Q |
201 |
cttaggtttcttaaagatccaaagaaacctggtatagaattgccttgaaaattatttctactgaggttcaaatattgtaattgttgcaactccatcagag |
300 |
Q |
| |
|
||||||||||||| |||||||||||||| ||| ||| ||||||| ||||||||||| ||||||||||||||| | |||||| |||||||| ||||| | |
|
|
| T |
14112730 |
cttaggtttcttagagatccaaagaaacttgggatatctttgccttcaaaattatttccactgaggttcaaatactttaattgctgcaactctatcagtg |
14112829 |
T |
|
| Q |
301 |
acttgtggatatcaccgctgatataaaa |
328 |
Q |
| |
|
|||||||||||||||| ||||||||||| |
|
|
| T |
14112830 |
acttgtggatatcaccactgatataaaa |
14112857 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 323
Target Start/End: Complemental strand, 13861036 - 13860714
Alignment:
| Q |
1 |
ttccaagttgagatggaatgcttccttccaaataattgttgctgagatcaagaaattgcaagttggagagatctccaagtcgttgaggaatcacaccatc |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| | |||||||||| |||||| |
|
|
| T |
13861036 |
ttccaagttgagatggaatgcttccttccaaaaaattgtagctgagatcaagaaattgcaagttggagagatctccaagttgatgaggaatcaaaccatc |
13860937 |
T |
|
| Q |
101 |
tagatgattgttggaaagattcaagtatttcaaatgtgaaagagactccaattgaataggaatttgtcctcgaaaataagaatatgaaagatcaaggtat |
200 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||| ||||| | ||| ||||||||||||||| |
|
|
| T |
13860936 |
tagatgattccacgaaagattcaagtatttcaaatgcgaaagagactcaaattgaatatgaatttgtcctccaaaatgacaattagaaagatcaaggtat |
13860837 |
T |
|
| Q |
201 |
cttaggtttcttaaagatccaaagaaacctggtatagaattgccttgaaaattatttctactgaggttcaaatattgtaattgttgcaactccatcagag |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| | | | | ||||||||||| |||||||||||||||||||||||||||||||||| || | |
|
|
| T |
13860836 |
cttaggtttcttaaagatccaaagaaacctggtagaatactctttctaaaattatttccgctgaggttcaaatattgtaattgttgcaactccaccaatg |
13860737 |
T |
|
| Q |
301 |
acttgtggatatcaccgctgata |
323 |
Q |
| |
|
|||||||||||||||| |||||| |
|
|
| T |
13860736 |
acttgtggatatcacccctgata |
13860714 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 1 - 482
Target Start/End: Complemental strand, 13891023 - 13890563
Alignment:
| Q |
1 |
ttccaagttgagatggaatgcttccttccaaataattgttgctgagatcaagaaattgcaagttggagagatctccaagtcgttgaggaatcacaccatc |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||| ||||| |||||||||||| |||||| |
|
|
| T |
13891023 |
ttccaagttgagatggaatgcttccttccaaaagattgcggctaagatcaagaaattgcaagttggagagatttccaa---gttgaggaatcaaaccatc |
13890927 |
T |
|
| Q |
101 |
tagatgattgttggaaagattcaagtatttcaaatgtgaaagagactccaattgaataggaatttgtcctcgaaaataagaatatgaaagatcaaggtat |
200 |
Q |
| |
|
|||| |||| ||||| ||||||||||||||||| |||| ||||| |||||||||||||||||||||| |||| |||| ||||||||||||||| |
|
|
| T |
13890926 |
cagatcattgccggaaattttcaagtatttcaaatggtaaagtgactcaaattgaataggaatttgtcctccaaaaccgcaataagaaagatcaaggtat |
13890827 |
T |
|
| Q |
201 |
cttaggtttcttaaagatccaaagaaacctggtatagaattgccttgaaaattatttctactgaggttcaaatattgtaattgttgcaactccatcagag |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||| | | | | ||| |||||||||||| ||||||||||||||||||| |||||||||||||||| | |
|
|
| T |
13890826 |
cttaggtttcttaaagatccaaagaaacctgggacatgactccctctaaaattatttctgttgaggttcaaatattgtaactgttgcaactccatcaatg |
13890727 |
T |
|
| Q |
301 |
acttgtggatatcaccgctgatataaaacttattgccatcataaccttcaagataattataatcataattataattataatcaccatgaaggtcgagcat |
400 |
Q |
| |
|
|||||||||||||||| |||||||||| ||||||||||| || ||||| || ||||||||| |||||||||||||||||| | |
|
|
| T |
13890726 |
acttgtggatatcacccatgatataaaatttattgccatc------------------attatcattataataattatagtcaccatgaaggtcgagctt |
13890645 |
T |
|
| Q |
401 |
aagcacatggccagtgatgttgtggcaaccaattccataccattggcagcaatcttcagttgtccaggatgacaacatgcca |
482 |
Q |
| |
|
||| ||||| ||||||| |||| |||||||||||||||||||| |||||||||| | || ||||| ||||||||||||||| |
|
|
| T |
13890644 |
aagtacatgaccagtgaggttgctgcaaccaattccataccattcgcagcaatctgccgtcgtccaagatgacaacatgcca |
13890563 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 371 - 523
Target Start/End: Original strand, 14049264 - 14049416
Alignment:
| Q |
371 |
ataattataatcaccatgaaggtcgagcataagcacatggccagtgatgttgtggcaaccaattccataccattggcagcaatcttcagttgtccaggat |
470 |
Q |
| |
|
||||||||||||||||||||| ||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
14049264 |
ataattataatcaccatgaagatcgagcataagtacatggccagtgatattgctgcaaccaattccataccattggcagcaatcttcagttgtccaaaat |
14049363 |
T |
|
| Q |
471 |
gacaacatgccaaatttgtcaacaaggccaaacttgaattgcaggagtgcctg |
523 |
Q |
| |
|
||||||||| |||||| |||| ||||||| ||||||||||||| |||||||| |
|
|
| T |
14049364 |
gacaacatgtcaaattcatcaataaggccagacttgaattgcagaagtgcctg |
14049416 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 374 - 522
Target Start/End: Original strand, 14017439 - 14017587
Alignment:
| Q |
374 |
attataatcaccatgaaggtcgagcataagcacatggccagtgatgttgtggcaaccaattccataccattggcagcaatcttcagttgtccaggatgac |
473 |
Q |
| |
|
|||||||||||||||||||| ||||||||| ||||| ||||||| |||| |||||||||||||||||||| |||||||||||| |||||||| |||||| |
|
|
| T |
14017439 |
attataatcaccatgaaggttgagcataagtacatgaccagtgaggttgctgcaaccaattccataccattcgcagcaatcttctgttgtccaagatgac |
14017538 |
T |
|
| Q |
474 |
aacatgccaaatttgtcaacaaggccaaacttgaattgcaggagtgcct |
522 |
Q |
| |
|
||||||||||| | |||||||||||| ||||||| || || ||||||| |
|
|
| T |
14017539 |
aacatgccaaactcatcaacaaggccatacttgaactgtagaagtgcct |
14017587 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 328
Target Start/End: Complemental strand, 13873158 - 13872831
Alignment:
| Q |
1 |
ttccaagttgagatggaatgcttccttccaaataattgttgctgagatcaagaaattgcaagttggagagatctccaagtcgttgaggaatcacaccatc |
100 |
Q |
| |
|
|||| |||| |||||||||||||||||| |||| ||||||||| ||||||| |||| | | |||||||||| ||||||| | |||||||||| |||||| |
|
|
| T |
13873158 |
ttccgagtttagatggaatgcttccttctaaatgattgttgcttagatcaataaatcgaacattggagagatttccaagttgatgaggaatcaaaccatc |
13873059 |
T |
|
| Q |
101 |
tagatgattgttggaaagattcaagtatttcaaatgtgaaagagactccaattgaataggaatttgtcctcgaaaataagaatatgaaagatcaaggtat |
200 |
Q |
| |
|
|||| ||| ||||||| |||| ||||||||||| | ||||||||| |||||||| | ||||| ||| | ||| | || |||||| ||||||||| |
|
|
| T |
13873058 |
gagatcattcgaggaaagactcaaatatttcaaatgcggaagagactcaaattgaattgaaatttttccaccaaagcgacaacgtgaaaggtcaaggtat |
13872959 |
T |
|
| Q |
201 |
cttaggtttcttaaagatccaaagaaacctggtatagaattgccttgaaaattatttctactgaggttcaaatattgtaattgttgcaactccatcagag |
300 |
Q |
| |
|
|||| |||||||| ||| ||||| |||||| || | |||||| ||||| ||| | ||||| ||||||||| | |||||| | ||||||||||| | |
|
|
| T |
13872958 |
cttatgtttcttagagaaccaaaaaaacctaaactattactgcctttaaaataattcccactgaagttcaaatactttaattgcttcaactccatcactg |
13872859 |
T |
|
| Q |
301 |
acttgtggatatcaccgctgatataaaa |
328 |
Q |
| |
|
|||||| || |||||| | ||||||||| |
|
|
| T |
13872858 |
acttgtcgacatcacctccgatataaaa |
13872831 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 375 - 482
Target Start/End: Complemental strand, 13872814 - 13872707
Alignment:
| Q |
375 |
ttataatcaccatgaaggtcgagcataagcacatggccagtgatgttgtggcaaccaattccataccattggcagcaatcttcagttgtccaggatgaca |
474 |
Q |
| |
|
||||||||||||||||| ||||||||||| ||||||||||||| |||| ||||| ||||||||||||||||||||||||| | |||||||| ||||||| |
|
|
| T |
13872814 |
ttataatcaccatgaagatcgagcataagtacatggccagtgaggttgctgcaacgaattccataccattggcagcaatctgccgttgtccaagatgaca |
13872715 |
T |
|
| Q |
475 |
acatgcca |
482 |
Q |
| |
|
|||||||| |
|
|
| T |
13872714 |
acatgcca |
13872707 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 14027050 - 14027129
Alignment:
| Q |
1 |
ttccaagttgagatggaatgcttccttccaaataattgttgctgagatcaagaaattgcaagttggagagatctccaagt |
80 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
14027050 |
ttccaagttgagatggaatgcttccttccaaataattgatgctgagatcaagaaattgcaagttggagagatttccaagt |
14027129 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 354 - 479
Target Start/End: Original strand, 13943351 - 13943479
Alignment:
| Q |
354 |
taattataatcataattataattat---aatcaccatgaaggtcgagcataagcacatggccagtgatgttgtggcaaccaattccataccattggcagc |
450 |
Q |
| |
|
|||||||||||||||||||||| || ||| |||||||||||||||||||| ||||| ||||||| |||| |||||||||||| | ||||||||||| |
|
|
| T |
13943351 |
taattataatcataattataatgatcataattaccatgaaggtcgagcataattacatgaccagtgacgttgctgcaaccaattcccttccattggcagc |
13943450 |
T |
|
| Q |
451 |
aatcttcagttgtccaggatgacaacatg |
479 |
Q |
| |
|
||||||| || ||||| ||||||| |||| |
|
|
| T |
13943451 |
aatcttctgtcgtccaagatgacagcatg |
13943479 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 13471086 - 13471007
Alignment:
| Q |
1 |
ttccaagttgagatggaatgcttccttccaaataattgttgctgagatcaagaaattgcaagttggagagatctccaagt |
80 |
Q |
| |
|
||||||||||||||||||| |||||||||||| ||| | |||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
13471086 |
ttccaagttgagatggaatatttccttccaaattattatagctgagatcaagaaattgcaagttggagagatttccaagt |
13471007 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 14112458 - 14112537
Alignment:
| Q |
1 |
ttccaagttgagatggaatgcttccttccaaataattgttgctgagatcaagaaattgcaagttggagagatctccaagt |
80 |
Q |
| |
|
|||||| ||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||| |||| ||||||| |
|
|
| T |
14112458 |
ttccaatttgagatggaatgcttccttcaaaaccattgatgctgagatcaagaaattgcaagttggaaagatttccaagt |
14112537 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 353 - 479
Target Start/End: Complemental strand, 13860711 - 13860579
Alignment:
| Q |
353 |
ataattataatcataattataatta------taatcaccatgaaggtcgagcataagcacatggccagtgatgttgtggcaaccaattccataccattgg |
446 |
Q |
| |
|
|||||||||||||| |||||||||| |||| |||||||||||||||||||| ||||| ||||| | |||| |||||||||||| | ||||||| |
|
|
| T |
13860711 |
ataattataatcatcattataattaccataataattaccatgaaggtcgagcataattacatgaccagttacgttgctgcaaccaattcccttccattgg |
13860612 |
T |
|
| Q |
447 |
cagcaatcttcagttgtccaggatgacaacatg |
479 |
Q |
| |
|
||||||||||| || ||||| ||||||| |||| |
|
|
| T |
13860611 |
cagcaatcttctgtcgtccaagatgacagcatg |
13860579 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 13873227 - 13873159
Alignment:
| Q |
4 |
caagttgagatggaatgcttccttccaaataattgttgctgagatcaagaaattgcaagttggagagat |
72 |
Q |
| |
|
||||||| ||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
13873227 |
caagttgggatggtatgcttccttccaaacgattgtagctgagatcaagaaattgcaagttggagagat |
13873159 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 14017059 - 14017141
Alignment:
| Q |
1 |
ttccaagttgagatggaatgcttccttccaaataa---ttgttgctgagatcaagaaattgcaagttggagagatctccaagt |
80 |
Q |
| |
|
||||||||||||||||||| |||||||||||| | |||| |||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
14017059 |
ttccaagttgagatggaattcttccttccaaaccaatgttgtggctgagatcaagaaattgcaagttggagagatttccaagt |
14017141 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 13873302 - 13873231
Alignment:
| Q |
1 |
ttccaagttgagatggaatgcttccttccaaataattgttgctgagatcaagaaattgcaagttggagagat |
72 |
Q |
| |
|
|||||||||| |||||||| ||||||||||||| |||||| |||||| |||||||| |||||||||||||| |
|
|
| T |
13873302 |
ttccaagttgggatggaatccttccttccaaatcattgtttttgagatgaagaaatttcaagttggagagat |
13873231 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 374 - 479
Target Start/End: Original strand, 14112873 - 14112978
Alignment:
| Q |
374 |
attataatcaccatgaaggtcgagcataagcacatggccagtgatgttgtggcaaccaattccataccattggcagcaatcttcagttgtccaggatgac |
473 |
Q |
| |
|
|||||| | |||||||||||||||||||| ||||| | ||||| |||| |||||||||||| | |||||||||||||||||| || |||| |||||| |
|
|
| T |
14112873 |
attatagttaccatgaaggtcgagcataattacatgacaagtgacgttgctgcaaccaattcccttccattggcagcaatcttctgtcctccaagatgac |
14112972 |
T |
|
| Q |
474 |
aacatg |
479 |
Q |
| |
|
| |||| |
|
|
| T |
14112973 |
agcatg |
14112978 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 185 - 328
Target Start/End: Original strand, 14049096 - 14049239
Alignment:
| Q |
185 |
tgaaagatcaaggtatcttaggtttcttaaagatccaaagaaacctggtatagaattgccttgaaaattatttctactgaggttcaaatattgtaattgt |
284 |
Q |
| |
|
|||||||||| | || |||| |||||||| |||||||| ||||||||| |||||| | || |||| ||| | || |||||||||||| | || ||| |
|
|
| T |
14049096 |
tgaaagatcatgataccttaagtttcttagagatccaatgaaacctgggatagaaatatctgtgaaataattcccacggaggttcaaatactttagttgc |
14049195 |
T |
|
| Q |
285 |
tgcaactccatcagagacttgtggatatcaccgctgatataaaa |
328 |
Q |
| |
|
||||||||||||| || |||||||||||||| | ||||||||| |
|
|
| T |
14049196 |
tgcaactccatcaatgagttgtggatatcaccacggatataaaa |
14049239 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 44 - 80
Target Start/End: Complemental strand, 13873331 - 13873295
Alignment:
| Q |
44 |
gagatcaagaaattgcaagttggagagatctccaagt |
80 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
13873331 |
gagatcaagaaattgcaagttggagagatttccaagt |
13873295 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 44 - 80
Target Start/End: Complemental strand, 13891052 - 13891016
Alignment:
| Q |
44 |
gagatcaagaaattgcaagttggagagatctccaagt |
80 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
13891052 |
gagatcaagaaattgcaagttggagagatttccaagt |
13891016 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 44 - 80
Target Start/End: Original strand, 14027021 - 14027057
Alignment:
| Q |
44 |
gagatcaagaaattgcaagttggagagatctccaagt |
80 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
14027021 |
gagatcaagaaattgcaagttggagagatttccaagt |
14027057 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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