View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4091_high_34 (Length: 298)

Name: NF4091_high_34
Description: NF4091
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4091_high_34
NF4091_high_34
[»] chr2 (5 HSPs)
chr2 (12-281)||(2807568-2807837)
chr2 (50-129)||(20129641-20129722)
chr2 (18-76)||(26784435-26784493)
chr2 (23-76)||(4682272-4682325)
chr2 (12-76)||(19235079-19235143)
[»] chr8 (3 HSPs)
chr8 (23-129)||(16351512-16351619)
chr8 (18-76)||(35643701-35643759)
chr8 (11-76)||(43733329-43733394)
[»] chr5 (8 HSPs)
chr5 (12-91)||(31636000-31636079)
chr5 (17-73)||(29922412-29922468)
chr5 (23-91)||(33667569-33667637)
chr5 (205-269)||(36159440-36159503)
chr5 (18-73)||(14749436-14749491)
chr5 (30-129)||(21916021-21916122)
chr5 (11-91)||(10082825-10082905)
chr5 (28-129)||(15369837-15369940)
[»] chr1 (2 HSPs)
chr1 (12-76)||(15577541-15577605)
chr1 (12-76)||(3818951-3819015)
[»] chr4 (6 HSPs)
chr4 (28-91)||(10209175-10209238)
chr4 (28-73)||(33225931-33225976)
chr4 (15-44)||(41340660-41340689)
chr4 (12-72)||(28351682-28351742)
chr4 (28-129)||(31897468-31897571)
chr4 (28-129)||(31961306-31961409)
[»] scaffold0325 (1 HSPs)
scaffold0325 (23-76)||(11931-11984)
[»] chr7 (2 HSPs)
chr7 (28-73)||(44401223-44401268)
chr7 (12-76)||(28628028-28628092)
[»] chr3 (4 HSPs)
chr3 (31-76)||(41087886-41087931)
chr3 (23-91)||(26990347-26990415)
chr3 (12-76)||(39600776-39600840)
chr3 (12-76)||(45289186-45289250)
[»] chr6 (3 HSPs)
chr6 (32-96)||(7080483-7080547)
chr6 (12-76)||(9593803-9593867)
chr6 (28-129)||(10617274-10617377)


Alignment Details
Target: chr2 (Bit Score: 250; Significance: 1e-139; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 12 - 281
Target Start/End: Original strand, 2807568 - 2807837
Alignment:
Q  12 agagatagagaaagatctagaaaaattataagagaaattatcaagaaggattcagagattaatgaattcgagaaatacataatttaatagaacactatga 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||    
T  2807568 agagatagagaaagatctagaaaaattataagagaaattatcaagaaggatccagagattaatgaattcgagaaatacatgatttgatagaacactatga 2807667  T
Q  112 catcgtttgatttatgtaaccagggccatttagttcgataaaatttgattgtttttgtataaatgagttgacttaaccaaagatagtgaccataaatatt 211  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2807668 catcgtttgatttatgtaaccagagccacttagttcgataaaatttgattgtttttgtataaatgagttgacttaaccaaagatagtgaccataaatatt 2807767  T
Q  212 tgagggatcaaaacttattgaaattttttagatggactaaaaacaaattaaaatttttataagaggtaaa 281  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2807768 tgagggatcaaaacttattgaaattttttagatggactaaaaacaaattaaaatttttataagaggtaaa 2807837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 129
Target Start/End: Complemental strand, 20129722 - 20129641
Alignment:
Q  50 tatcaagaaggattcagagattaatgaattcgagaaatacataat--ttaatagaacactatgacatcgtttgatttatgta 129  Q
    |||||||||| ||  ||||||||||||||| |||||||||||  |  |||||| ||||||||||| |||||||||| |||||    
T  20129722 tatcaagaagaatctagagattaatgaattggagaaatacatggttgttaatataacactatgacgtcgtttgattcatgta 20129641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 26784493 - 26784435
Alignment:
Q  18 agagaaagatctagaaaaattataagagaaattatcaagaaggattcagagattaatga 76  Q
    ||||||||| ||||||||| ||||||||||| ||| ||||| |||  ||||||||||||    
T  26784493 agagaaagacctagaaaaactataagagaaactattaagaaagatatagagattaatga 26784435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 76
Target Start/End: Complemental strand, 4682325 - 4682272
Alignment:
Q  23 aagatctagaaaaattataagagaaattatcaagaaggattcagagattaatga 76  Q
    |||||||||||||| ||||||||||||| ||| ||| |||| |||| |||||||    
T  4682325 aagatctagaaaaactataagagaaattttcatgaaagatttagaggttaatga 4682272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 76
Target Start/End: Complemental strand, 19235143 - 19235079
Alignment:
Q  12 agagatagagaaagatctagaaaaattataagagaaattatcaagaaggattcagagattaatga 76  Q
    |||||||||| |||| ||||||||| ||||||||||| |||  |||| |||  ||||||||||||    
T  19235143 agagatagaggaagacctagaaaaactataagagaaactattgagaaagatctagagattaatga 19235079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000002; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 129
Target Start/End: Original strand, 16351512 - 16351619
Alignment:
Q  23 aagatctagaaaaattataagagaaattatcaagaaggattcagagattaatgaattcgagaaatacat--aatttaatagaacactatgacatcgtttg 120  Q
    |||| ||||||||| ||| ||||||| ||| |||||||||  |||||||||||| || |||||| ||||    ||||||||||||||||| |||||||||    
T  16351512 aagacctagaaaaactattagagaaactattaagaaggatctagagattaatgagtt-gagaaagacatggtttttaatagaacactatggcatcgtttg 16351610  T
Q  121 atttatgta 129  Q
    ||| |||||    
T  16351611 attcatgta 16351619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 35643759 - 35643701
Alignment:
Q  18 agagaaagatctagaaaaattataagagaaattatcaagaaggattcagagattaatga 76  Q
    |||| |||| ||||||||| ||||||||||||||| ||||| |||  ||||||||||||    
T  35643759 agaggaagacctagaaaaactataagagaaattattaagaaagatctagagattaatga 35643701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 43733329 - 43733394
Alignment:
Q  11 cagagatagagaaagatctagaaaaattataagagaaattatcaagaaggattcagagattaatga 76  Q
    ||||| ||||| |||| ||||||||| || |||||||| |||| ||||||||  ||||||||||||    
T  43733329 cagaggtagaggaagacctagaaaaactacaagagaaactatcgagaaggatctagagattaatga 43733394  T

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Target: chr5 (Bit Score: 36; Significance: 0.00000000003; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 91
Target Start/End: Complemental strand, 31636079 - 31636000
Alignment:
Q  12 agagatagagaaagatctagaaaaattataagagaaattatcaagaaggattcagagattaatgaattcgagaaatacat 91  Q
    |||||||| | |||||||||||||| ||| ||||||| |||||||||||||  |||||| ||||| || |||||| ||||    
T  31636079 agagataggggaagatctagaaaaactattagagaaactatcaagaaggatatagagatcaatgagttggagaaacacat 31636000  T

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Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 29922412 - 29922468
Alignment:
Q  17 tagagaaagatctagaaaaattataagagaaattatcaagaaggattcagagattaa 73  Q
    ||||| |||||||||||||| ||||||||||| ||| ||||| |||| |||||||||    
T  29922412 tagaggaagatctagaaaaactataagagaaactattaagaaagatttagagattaa 29922468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 33667569 - 33667637
Alignment:
Q  23 aagatctagaaaaattataagagaaattatcaagaaggattcagagattaatgaattcgagaaatacat 91  Q
    |||| ||||||||| |||||||||| |||| |||||||||  |||||||||||| || |||||| ||||    
T  33667569 aagacctagaaaaactataagagaagttattaagaaggatctagagattaatgagttggagaaagacat 33667637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 269
Target Start/End: Complemental strand, 36159503 - 36159440
Alignment:
Q  205 aaatatttgagggatcaaaacttattgaaattttttagatggactaaaaacaaattaaaattttt 269  Q
    ||||||||||| || | |||||| ||||||||||||||| ||| ||||||||||||| |||||||    
T  36159503 aaatatttgagcga-ctaaactttttgaaattttttagagggattaaaaacaaattataattttt 36159440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 14749436 - 14749491
Alignment:
Q  18 agagaaagatctagaaaaattataagagaaattatcaagaaggattcagagattaa 73  Q
    |||| |||| ||||||||| ||||||||||| |||||||||||||  |||||||||    
T  14749436 agaggaagacctagaaaaactataagagaaactatcaagaaggatctagagattaa 14749491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 129
Target Start/End: Original strand, 21916021 - 21916122
Alignment:
Q  30 agaaaaattataagagaaattatcaagaaggattcagagattaatgaattcgagaaatacataattta--atagaacactatgacatcgtttgatttatg 127  Q
    |||||||  ||||||||||  || | |||||||  |||||| ||||| || ||||||||||| ||||   ||||||| |||||||||||||||||| |||    
T  21916021 agaaaaacgataagagaaacaattaggaaggatctagagataaatgagttggagaaatacattatttttgatagaactctatgacatcgtttgattcatg 21916120  T
Q  128 ta 129  Q
    ||    
T  21916121 ta 21916122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 91
Target Start/End: Complemental strand, 10082905 - 10082825
Alignment:
Q  11 cagagatagagaaagatctagaaaaattataagagaaattatcaagaaggattcagagattaatgaattcgagaaatacat 91  Q
    ||||||||| | |||| ||||||||| ||||||||||| ||  || ||||||  |||||||||||| || |||||| ||||    
T  10082905 cagagatagggtaagacctagaaaaactataagagaaactagtaacaaggatctagagattaatgagttggagaaagacat 10082825  T

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Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 129
Target Start/End: Complemental strand, 15369940 - 15369837
Alignment:
Q  28 ctagaaaaattataagagaaattatcaagaaggattcagagattaatgaattcgagaaatacataatt--taatagaacactatgacatcgtttgattta 125  Q
    ||||||||| ||||||||||| ||| |||||  ||  | |||| ||||| || |||| ||||||||||  ||||| |||||||||||||  ||| |||||    
T  15369940 ctagaaaaagtataagagaaactattaagaaaaatctaaagataaatgagttggagacatacataattcttaataaaacactatgacattatttaattta 15369841  T
Q  126 tgta 129  Q
    ||||    
T  15369840 tgta 15369837  T

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Target: chr1 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 76
Target Start/End: Original strand, 15577541 - 15577605
Alignment:
Q  12 agagatagagaaagatctagaaaaattataagagaaattatcaagaaggattcagagattaatga 76  Q
    |||| ||||| |||||||| |||||| |||||||||| ||| |||||||||  ||||||||||||    
T  15577541 agaggtagaggaagatctaaaaaaataataagagaaactattaagaaggatatagagattaatga 15577605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 76
Target Start/End: Complemental strand, 3819015 - 3818951
Alignment:
Q  12 agagatagagaaagatctagaaaaattataagagaaattatcaagaaggattcagagattaatga 76  Q
    ||||| |||| |||| || |||||| ||||||||||| ||| ||||| |||| ||||||||||||    
T  3819015 agagaaagaggaagaccttgaaaaactataagagaaactattaagaaagatttagagattaatga 3818951  T

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Target: chr4 (Bit Score: 32; Significance: 0.000000007; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 28 - 91
Target Start/End: Original strand, 10209175 - 10209238
Alignment:
Q  28 ctagaaaaattataagagaaattatcaagaaggattcagagattaatgaattcgagaaatacat 91  Q
    ||||||||| ||||||||||| ||| |||||||||  |||||||||||| || |||||| ||||    
T  10209175 ctagaaaaactataagagaaactattaagaaggatctagagattaatgagttggagaaagacat 10209238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 33225976 - 33225931
Alignment:
Q  28 ctagaaaaattataagagaaattatcaagaaggattcagagattaa 73  Q
    ||||||||||||||||||||| ||| ||||| |||| |||||||||    
T  33225976 ctagaaaaattataagagaaactattaagaaagatttagagattaa 33225931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 44
Target Start/End: Complemental strand, 41340689 - 41340660
Alignment:
Q  15 gatagagaaagatctagaaaaattataaga 44  Q
    ||||||||||||||||||||||||||||||    
T  41340689 gatagagaaagatctagaaaaattataaga 41340660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 28351682 - 28351742
Alignment:
Q  12 agagatagagaaagatctagaaaaattataagagaaattatcaagaaggattcagagatta 72  Q
    |||| |||||||||| ||||||||| ||||||||||| ||| | ||| |||| ||||||||    
T  28351682 agaggtagagaaagacctagaaaaactataagagaaactattacgaaagatttagagatta 28351742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 129
Target Start/End: Complemental strand, 31897571 - 31897468
Alignment:
Q  28 ctagaaaaattataagagaaattatcaagaaggattcagagattaatgaattcgagaaatacataat--ttaatagaacactatgacatcgtttgattta 125  Q
    ||||||||| ||||||||||| ||| | |||||||  |||||| ||||| || |||||| ||||  |  || |||||||||||||||  ||||||||| |    
T  31897571 ctagaaaaactataagagaaactattaggaaggatctagagataaatgagttggagaaagacatggttgttgatagaacactatgacgccgtttgattca 31897472  T
Q  126 tgta 129  Q
    ||||    
T  31897471 tgta 31897468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 129
Target Start/End: Complemental strand, 31961409 - 31961306
Alignment:
Q  28 ctagaaaaattataagagaaattatcaagaaggattcagagattaatgaattcgagaaatacataatt--taatagaacactatgacatcgtttgattta 125  Q
    ||||||||| ||||||||||| ||| | ||| |||  |||||| ||||| || |||||| ||||  ||  | ||||||||||||||| |||||||||| |    
T  31961409 ctagaaaaactataagagaaactattaggaaagatctagagataaatgagttggagaaagacatggttgttgatagaacactatgacgtcgtttgattca 31961310  T
Q  126 tgta 129  Q
    ||||    
T  31961309 tgta 31961306  T

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Target: scaffold0325 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 76
Target Start/End: Original strand, 11931 - 11984
Alignment:
Q  23 aagatctagaaaaattataagagaaattatcaagaaggattcagagattaatga 76  Q
    |||| ||||||||| ||||||||||| ||| |||||||||  ||||||||||||    
T  11931 aagaactagaaaaactataagagaaactattaagaaggatctagagattaatga 11984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 44401268 - 44401223
Alignment:
Q  28 ctagaaaaattataagagaaattatcaagaaggattcagagattaa 73  Q
    ||||||||||||||||||||| ||| ||||| |||| |||||||||    
T  44401268 ctagaaaaattataagagaaactattaagaaagatttagagattaa 44401223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 76
Target Start/End: Complemental strand, 28628092 - 28628028
Alignment:
Q  12 agagatagagaaagatctagaaaaattataagagaaattatcaagaaggattcagagattaatga 76  Q
    |||| ||||| |||| ||||||||| ||||||||||| ||| | ||| |||| ||||||||||||    
T  28628092 agaggtagaggaagacctagaaaaactataagagaaactattaggaaagatttagagattaatga 28628028  T

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Target: chr3 (Bit Score: 30; Significance: 0.0000001; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 76
Target Start/End: Original strand, 41087886 - 41087931
Alignment:
Q  31 gaaaaattataagagaaattatcaagaaggattcagagattaatga 76  Q
    |||||| ||||| ||||||||| |||||||||| ||||||||||||    
T  41087886 gaaaaactataaaagaaattattaagaaggatttagagattaatga 41087931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 26990347 - 26990415
Alignment:
Q  23 aagatctagaaaaattataagagaaattatcaagaaggattcagagattaatgaattcgagaaatacat 91  Q
    |||| ||||||||| ||| ||||||| |||||||||||||  |||||| ||||| || |||||| ||||    
T  26990347 aagacctagaaaaactattagagaaactatcaagaaggatctagagatcaatgagttggagaaagacat 26990415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 76
Target Start/End: Complemental strand, 39600840 - 39600776
Alignment:
Q  12 agagatagagaaagatctagaaaaattataagagaaattatcaagaaggattcagagattaatga 76  Q
    |||| ||||| |||| ||||||||| ||||||||||| ||| ||||| |||| |||| |||||||    
T  39600840 agaggtagaggaagacctagaaaaactataagagaaactattaagaaagatttagaggttaatga 39600776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 76
Target Start/End: Complemental strand, 45289250 - 45289186
Alignment:
Q  12 agagatagagaaagatctagaaaaattataagagaaattatcaagaaggattcagagattaatga 76  Q
    |||||||||| ||||||||  |||| ||||||||||| ||| | ||| |||| ||||||||||||    
T  45289250 agagatagaggaagatctatgaaaactataagagaaactattaggaaagatttagagattaatga 45289186  T

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Target: chr6 (Bit Score: 29; Significance: 0.0000004; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 96
Target Start/End: Original strand, 7080483 - 7080547
Alignment:
Q  32 aaaaattataagagaaattatcaagaaggattcagagattaatgaattcgagaaatacataattt 96  Q
    ||||| ||||||||||| ||||||||| |||  | ||||||||||||  ||||||||||| ||||    
T  7080483 aaaaactataagagaaactatcaagaaagatctaaagattaatgaatcggagaaatacatgattt 7080547  T

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Target: chr6; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 76
Target Start/End: Complemental strand, 9593867 - 9593803
Alignment:
Q  12 agagatagagaaagatctagaaaaattataagagaaattatcaagaaggattcagagattaatga 76  Q
    |||| ||||| |||| ||||||||||||||||||||| ||| | ||| || | ||||||||||||    
T  9593867 agaggtagaggaagacctagaaaaattataagagaaactattaggaaagacttagagattaatga 9593803  T

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Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 129
Target Start/End: Complemental strand, 10617377 - 10617274
Alignment:
Q  28 ctagaaaaattataagagaaattatcaagaaggattcagagattaatgaattcgagaaatacat--aatttaatagaacactatgacatcgtttgattta 125  Q
    ||||||||| |||||||||||  || |||||||||  |||||||||||| || |||||| ||||    ||| |||||||||| || | | ||||||||||    
T  10617377 ctagaaaaactataagagaaaccattaagaaggatctagagattaatgagttggagaaagacatggtttttgatagaacactttggcgttgtttgattta 10617278  T
Q  126 tgta 129  Q
    ||||    
T  10617277 tgta 10617274  T

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