View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4091_low_27 (Length: 355)

Name: NF4091_low_27
Description: NF4091
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4091_low_27
NF4091_low_27
[»] chr6 (26 HSPs)
chr6 (7-340)||(21860680-21861015)
chr6 (7-288)||(11153972-11154253)
chr6 (7-288)||(954926-955207)
chr6 (122-288)||(28579059-28579225)
chr6 (122-288)||(23573519-23573684)
chr6 (7-217)||(25118784-25118994)
chr6 (122-288)||(4589277-4589443)
chr6 (126-288)||(11837051-11837213)
chr6 (122-288)||(14104448-14104614)
chr6 (122-288)||(27782924-27783090)
chr6 (122-288)||(24083575-24083743)
chr6 (7-98)||(15288404-15288495)
chr6 (122-281)||(27440371-27440519)
chr6 (122-225)||(15288501-15288604)
chr6 (7-98)||(28579231-28579318)
chr6 (238-288)||(25109994-25110044)
chr6 (37-98)||(4589210-4589271)
chr6 (37-98)||(14104625-14104686)
chr6 (37-69)||(27783139-27783171)
chr6 (37-98)||(11836961-11837022)
chr6 (306-339)||(14104316-14104349)
chr6 (37-98)||(23573708-23573769)
chr6 (37-69)||(16918835-16918867)
chr6 (303-339)||(23573390-23573426)
chr6 (303-339)||(23580602-23580638)
chr6 (303-339)||(27438722-27438758)
[»] chr1 (41 HSPs)
chr1 (7-331)||(12768578-12768904)
chr1 (7-288)||(35954875-35955156)
chr1 (7-288)||(36731122-36731403)
chr1 (7-295)||(29648952-29649241)
chr1 (127-288)||(46118696-46118857)
chr1 (122-288)||(5327167-5327333)
chr1 (122-288)||(7153380-7153546)
chr1 (122-288)||(24781521-24781686)
chr1 (7-295)||(33005721-33006015)
chr1 (8-288)||(51087176-51087456)
chr1 (127-288)||(30302407-30302569)
chr1 (122-288)||(29521389-29521555)
chr1 (122-288)||(44511807-44511973)
chr1 (122-288)||(10773191-10773357)
chr1 (122-288)||(33705060-33705226)
chr1 (123-288)||(25656301-25656462)
chr1 (122-288)||(36308298-36308468)
chr1 (122-288)||(14488205-14488371)
chr1 (123-288)||(52405058-52405224)
chr1 (123-288)||(52406491-52406657)
chr1 (122-217)||(7556718-7556813)
chr1 (122-288)||(48128236-48128401)
chr1 (7-98)||(5327358-5327449)
chr1 (7-98)||(30302288-30302379)
chr1 (7-98)||(46118884-46118975)
chr1 (11-98)||(52405231-52405318)
chr1 (11-98)||(52406664-52406751)
chr1 (8-98)||(25656486-25656576)
chr1 (8-93)||(29521275-29521360)
chr1 (37-98)||(7153570-7153631)
chr1 (239-288)||(7556643-7556692)
chr1 (122-155)||(14536794-14536827)
chr1 (303-339)||(36308169-36308205)
chr1 (37-98)||(10773381-10773442)
chr1 (37-98)||(24781710-24781771)
chr1 (37-98)||(44511727-44511788)
chr1 (37-98)||(48128425-48128486)
chr1 (303-339)||(7153251-7153287)
chr1 (303-339)||(10773060-10773096)
chr1 (303-339)||(14488468-14488504)
chr1 (37-73)||(36308517-36308553)
[»] chr2 (33 HSPs)
chr2 (7-339)||(3851090-3851426)
chr2 (7-288)||(3754230-3754512)
chr2 (7-288)||(2291592-2291873)
chr2 (122-339)||(39774574-39774803)
chr2 (7-288)||(1054435-1054715)
chr2 (7-288)||(4737530-4737811)
chr2 (122-339)||(42080275-42080499)
chr2 (122-288)||(38281666-38281832)
chr2 (122-288)||(39966564-39966730)
chr2 (7-288)||(15153024-15153305)
chr2 (126-288)||(27551009-27551172)
chr2 (122-288)||(3906309-3906475)
chr2 (122-288)||(37724910-37725076)
chr2 (7-288)||(6645123-6645400)
chr2 (8-288)||(15399445-15399729)
chr2 (7-98)||(39774477-39774568)
chr2 (7-98)||(42080159-42080250)
chr2 (122-288)||(39068416-39068583)
chr2 (122-276)||(77035-77189)
chr2 (200-288)||(25223932-25224020)
chr2 (8-69)||(39068298-39068359)
chr2 (249-339)||(3754514-3754606)
chr2 (7-56)||(28391246-28391295)
chr2 (8-98)||(27550908-27550998)
chr2 (37-98)||(76950-77011)
chr2 (7-60)||(40494933-40494986)
chr2 (242-288)||(28391326-28391372)
chr2 (37-98)||(3906224-3906285)
chr2 (37-98)||(37724825-37724886)
chr2 (37-98)||(38281581-38281642)
chr2 (303-339)||(38281925-38281961)
chr2 (37-69)||(39966479-39966511)
chr2 (303-339)||(39966823-39966859)
[»] chr4 (45 HSPs)
chr4 (8-339)||(50495565-50495895)
chr4 (10-288)||(46718175-46718453)
chr4 (122-288)||(34073487-34073653)
chr4 (8-288)||(49874203-49874482)
chr4 (122-288)||(16665126-16665292)
chr4 (122-288)||(23418718-23418884)
chr4 (122-288)||(52447855-52448021)
chr4 (122-288)||(23932971-23933137)
chr4 (122-288)||(30826918-30827084)
chr4 (122-288)||(41040960-41041126)
chr4 (123-288)||(3035230-3035394)
chr4 (7-288)||(13533868-13534151)
chr4 (122-288)||(17361568-17361734)
chr4 (122-288)||(4653438-4653604)
chr4 (122-288)||(31292108-31292274)
chr4 (122-288)||(54919866-54920031)
chr4 (126-288)||(20353484-20353646)
chr4 (122-288)||(7487735-7487903)
chr4 (126-288)||(20342759-20342921)
chr4 (122-276)||(20786509-20786663)
chr4 (122-217)||(35045518-35045613)
chr4 (7-225)||(35825064-35825283)
chr4 (7-98)||(31291994-31292085)
chr4 (7-98)||(27958788-27958879)
chr4 (8-98)||(34073659-34073749)
chr4 (156-288)||(27961892-27962024)
chr4 (8-98)||(23932858-23932947)
chr4 (8-69)||(35045646-35045707)
chr4 (122-160)||(27958903-27958941)
chr4 (234-288)||(55450648-55450702)
chr4 (37-98)||(16665316-16665377)
chr4 (37-98)||(23418633-23418694)
chr4 (37-98)||(52448045-52448106)
chr4 (303-339)||(20786709-20786745)
chr4 (37-98)||(20786424-20786485)
chr4 (37-98)||(30826833-30826894)
chr4 (37-98)||(41040875-41040936)
chr4 (37-98)||(54920055-54920116)
chr4 (303-339)||(3035488-3035524)
chr4 (37-69)||(4653657-4653689)
chr4 (37-69)||(7487951-7487983)
chr4 (303-339)||(16664997-16665033)
chr4 (303-339)||(49969898-49969934)
chr4 (303-339)||(52447726-52447762)
chr4 (303-339)||(54919735-54919771)
[»] scaffold0060 (2 HSPs)
scaffold0060 (122-340)||(56648-56867)
scaffold0060 (7-98)||(56896-56987)
[»] chr3 (82 HSPs)
chr3 (7-288)||(38697327-38697608)
chr3 (8-288)||(3891968-3892249)
chr3 (12-288)||(55411684-55411963)
chr3 (122-288)||(10827123-10827290)
chr3 (122-288)||(4232476-4232642)
chr3 (122-288)||(8851185-8851351)
chr3 (122-288)||(11122085-11122251)
chr3 (8-288)||(43338832-43339112)
chr3 (122-286)||(53777760-53777926)
chr3 (126-288)||(18410700-18410862)
chr3 (122-288)||(23020270-23020436)
chr3 (122-288)||(45170479-45170645)
chr3 (122-288)||(50547881-50548047)
chr3 (7-288)||(22428215-22428500)
chr3 (122-288)||(45053117-45053283)
chr3 (122-287)||(44842594-44842759)
chr3 (122-288)||(42826465-42826631)
chr3 (122-288)||(30439689-30439855)
chr3 (7-217)||(38236064-38236274)
chr3 (122-288)||(40424176-40424342)
chr3 (122-288)||(41102156-41102322)
chr3 (122-288)||(47912340-47912506)
chr3 (122-288)||(50609923-50610089)
chr3 (122-286)||(22605356-22605520)
chr3 (122-288)||(2218474-2218640)
chr3 (122-288)||(30042889-30043055)
chr3 (122-288)||(37785917-37786083)
chr3 (143-288)||(13213945-13214090)
chr3 (122-281)||(40906628-40906787)
chr3 (122-288)||(16464402-16464568)
chr3 (122-288)||(41697494-41697660)
chr3 (122-288)||(51722198-51722364)
chr3 (123-285)||(30363081-30363244)
chr3 (129-287)||(6175057-6175215)
chr3 (122-225)||(37219600-37219703)
chr3 (122-288)||(16009272-16009438)
chr3 (122-288)||(27325084-27325250)
chr3 (122-288)||(27331321-27331487)
chr3 (122-225)||(27126724-27126827)
chr3 (122-288)||(31313020-31313190)
chr3 (7-98)||(42826652-42826743)
chr3 (8-98)||(10827027-10827117)
chr3 (8-176)||(37181288-37181456)
chr3 (8-98)||(30362896-30362986)
chr3 (7-98)||(31312923-31313014)
chr3 (7-98)||(51722101-51722192)
chr3 (7-78)||(18762617-18762688)
chr3 (21-98)||(53777677-53777754)
chr3 (233-288)||(37181480-37181535)
chr3 (239-288)||(38235990-38236039)
chr3 (37-98)||(41102346-41102407)
chr3 (31-98)||(40424366-40424433)
chr3 (242-288)||(27321499-27321545)
chr3 (127-165)||(30363017-30363055)
chr3 (37-98)||(2218664-2218725)
chr3 (37-98)||(16464592-16464653)
chr3 (37-98)||(22605544-22605605)
chr3 (37-98)||(27126851-27126912)
chr3 (37-98)||(27324999-27325060)
chr3 (37-98)||(27331236-27331297)
chr3 (37-98)||(30042804-30042865)
chr3 (37-98)||(37219515-37219576)
chr3 (37-98)||(37786107-37786168)
chr3 (37-98)||(41697409-41697470)
chr3 (303-339)||(47912599-47912635)
chr3 (39-98)||(4232393-4232452)
chr3 (7-98)||(42164895-42164986)
chr3 (37-98)||(18410890-18410951)
chr3 (123-152)||(18762542-18762571)
chr3 (37-98)||(40906811-40906872)
chr3 (7-56)||(42879383-42879432)
chr3 (37-98)||(45053032-45053093)
chr3 (37-98)||(50547796-50547857)
chr3 (303-339)||(2218345-2218381)
chr3 (303-339)||(8851444-8851480)
chr3 (303-339)||(11121955-11121991)
chr3 (303-339)||(18410570-18410606)
chr3 (303-339)||(27321362-27321398)
chr3 (303-339)||(41102025-41102061)
chr3 (303-339)||(44842854-44842890)
chr3 (303-339)||(45053376-45053412)
chr3 (303-339)||(45170349-45170385)
[»] chr7 (59 HSPs)
chr7 (126-288)||(47504083-47504245)
chr7 (123-288)||(30759450-30759616)
chr7 (8-288)||(48606871-48607151)
chr7 (122-288)||(724887-725053)
chr7 (122-288)||(44458657-44458823)
chr7 (122-288)||(48683724-48683890)
chr7 (8-288)||(23593812-23594093)
chr7 (122-288)||(3415507-3415673)
chr7 (126-288)||(17967679-17967842)
chr7 (122-288)||(28588968-28589134)
chr7 (122-295)||(21730156-21730332)
chr7 (7-288)||(9662844-9663127)
chr7 (122-288)||(20120488-20120653)
chr7 (122-288)||(33245993-33246159)
chr7 (122-288)||(40015041-40015207)
chr7 (126-288)||(46554855-46555017)
chr7 (122-288)||(46935631-46935798)
chr7 (122-288)||(4925407-4925573)
chr7 (122-288)||(16276924-16277090)
chr7 (122-288)||(41336764-41336932)
chr7 (122-288)||(21815864-21816030)
chr7 (122-288)||(44883206-44883372)
chr7 (122-288)||(47908360-47908526)
chr7 (8-225)||(5373791-5374008)
chr7 (122-288)||(18994320-18994486)
chr7 (122-225)||(41858007-41858110)
chr7 (140-288)||(44522310-44522458)
chr7 (122-225)||(48951636-48951739)
chr7 (8-98)||(17967560-17967650)
chr7 (8-98)||(44521330-44521420)
chr7 (8-93)||(47504279-47504364)
chr7 (7-94)||(46935534-46935621)
chr7 (7-273)||(8392716-8392987)
chr7 (8-96)||(21730358-21730449)
chr7 (8-98)||(30759335-30759425)
chr7 (37-98)||(3415422-3415483)
chr7 (37-98)||(16276839-16276900)
chr7 (37-98)||(18994235-18994296)
chr7 (37-98)||(21816054-21816115)
chr7 (37-98)||(33245908-33245969)
chr7 (37-98)||(44458572-44458633)
chr7 (37-98)||(44883396-44883457)
chr7 (37-98)||(46554766-46554827)
chr7 (37-98)||(47908275-47908336)
chr7 (37-69)||(724802-724834)
chr7 (7-98)||(47253797-47253888)
chr7 (37-98)||(20120677-20120738)
chr7 (37-98)||(40014956-40015017)
chr7 (37-98)||(41857922-41857983)
chr7 (37-98)||(48683914-48683975)
chr7 (37-98)||(48951551-48951612)
chr7 (303-339)||(4925278-4925314)
chr7 (303-339)||(16277183-16277219)
chr7 (303-339)||(28589227-28589263)
chr7 (303-339)||(33246252-33246288)
chr7 (303-339)||(40015300-40015336)
chr7 (303-339)||(41336636-41336672)
chr7 (303-339)||(44458916-44458952)
chr7 (303-339)||(46555108-46555144)
[»] chr8 (55 HSPs)
chr8 (122-288)||(45408620-45408786)
chr8 (122-288)||(42736099-42736265)
chr8 (122-288)||(6093834-6094000)
chr8 (122-288)||(277240-277406)
chr8 (122-288)||(638443-638609)
chr8 (122-288)||(824249-824415)
chr8 (127-288)||(30556098-30556260)
chr8 (122-286)||(28085299-28085466)
chr8 (7-288)||(36191926-36192207)
chr8 (122-288)||(38060640-38060806)
chr8 (7-217)||(39858556-39858766)
chr8 (122-288)||(44256596-44256762)
chr8 (10-288)||(43694456-43694734)
chr8 (8-288)||(13140602-13140882)
chr8 (122-284)||(40617031-40617194)
chr8 (122-288)||(2081675-2081841)
chr8 (122-288)||(15882833-15882999)
chr8 (122-288)||(18955957-18956123)
chr8 (123-284)||(27912904-27913065)
chr8 (123-284)||(27959323-27959484)
chr8 (123-288)||(42645818-42645984)
chr8 (122-288)||(40303771-40303941)
chr8 (122-263)||(18088921-18089064)
chr8 (122-225)||(30111292-30111395)
chr8 (122-288)||(23346562-23346728)
chr8 (143-288)||(25583023-25583168)
chr8 (122-288)||(3850533-3850702)
chr8 (9-96)||(6095493-6095580)
chr8 (167-288)||(16096396-16096517)
chr8 (8-98)||(30555976-30556066)
chr8 (8-98)||(45408519-45408609)
chr8 (7-98)||(3850713-3850804)
chr8 (8-98)||(42646011-42646101)
chr8 (7-79)||(40303657-40303729)
chr8 (7-98)||(18088824-18088915)
chr8 (122-288)||(4622158-4622310)
chr8 (7-98)||(42736271-42736362)
chr8 (21-98)||(30111419-30111496)
chr8 (122-158)||(26950212-26950248)
chr8 (122-162)||(41545488-41545528)
chr8 (37-98)||(638358-638419)
chr8 (37-98)||(38060555-38060616)
chr8 (250-295)||(30106237-30106283)
chr8 (52-98)||(40617218-40617264)
chr8 (37-98)||(277430-277491)
chr8 (37-98)||(824164-824225)
chr8 (37-98)||(15882748-15882809)
chr8 (37-98)||(41545534-41545595)
chr8 (303-339)||(277109-277145)
chr8 (303-339)||(638704-638740)
chr8 (303-339)||(824510-824546)
chr8 (303-339)||(4622403-4622439)
chr8 (303-339)||(18955621-18955657)
chr8 (37-69)||(26950160-26950192)
chr8 (303-339)||(41545349-41545385)
[»] chr5 (36 HSPs)
chr5 (122-288)||(744994-745160)
chr5 (122-288)||(39588909-39589075)
chr5 (122-288)||(9592258-9592424)
chr5 (123-288)||(27551233-27551399)
chr5 (7-288)||(11985099-11985378)
chr5 (122-288)||(31551555-31551722)
chr5 (122-288)||(27019522-27019688)
chr5 (122-288)||(30130345-30130511)
chr5 (122-288)||(42611654-42611820)
chr5 (7-288)||(13304741-13305022)
chr5 (126-288)||(9986752-9986915)
chr5 (122-288)||(15420801-15420967)
chr5 (122-288)||(12499858-12500024)
chr5 (122-288)||(824235-824400)
chr5 (122-288)||(19665411-19665577)
chr5 (122-288)||(20545581-20545746)
chr5 (8-288)||(37270868-37271146)
chr5 (126-218)||(37939895-37939987)
chr5 (9-98)||(9986634-9986723)
chr5 (8-98)||(27551423-27551512)
chr5 (9-98)||(31551443-31551532)
chr5 (37-98)||(19665601-19665662)
chr5 (37-98)||(15420991-15421052)
chr5 (37-98)||(27019437-27019498)
chr5 (37-98)||(744909-744970)
chr5 (37-98)||(12500048-12500109)
chr5 (7-88)||(29390610-29390691)
chr5 (37-98)||(30130260-30130321)
chr5 (37-98)||(39589081-39589142)
chr5 (37-98)||(42611569-42611630)
chr5 (37-69)||(824147-824179)
chr5 (303-339)||(824496-824532)
chr5 (303-339)||(9592129-9592165)
chr5 (303-339)||(12499729-12499765)
chr5 (303-339)||(20545839-20545875)
chr5 (303-339)||(39588779-39588815)
[»] scaffold0075 (2 HSPs)
scaffold0075 (123-288)||(18704-18870)
scaffold0075 (34-98)||(18628-18692)
[»] scaffold0115 (2 HSPs)
scaffold0115 (138-288)||(21358-21511)
scaffold0115 (303-339)||(21229-21265)
[»] scaffold0208 (2 HSPs)
scaffold0208 (122-198)||(5226-5302)
scaffold0208 (9-90)||(5113-5194)
[»] scaffold0259 (2 HSPs)
scaffold0259 (144-288)||(5497-5642)
scaffold0259 (7-98)||(5254-5347)
[»] scaffold0003 (1 HSPs)
scaffold0003 (122-281)||(46842-46990)


Alignment Details
Target: chr6 (Bit Score: 206; Significance: 1e-112; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 7 - 340
Target Start/End: Original strand, 21860680 - 21861015
Alignment:
Q  7 caattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttgannnnnnnn 106  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||            
T  21860680 caattttcgtgagaatcgtcgtcgttcgtttgattccaaatctcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttgatttttctt 21860779  T
Q  107 nnnnnnnnnnnnnnncttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgat 206  Q
                   |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  21860780 tttgatttgatttttcttgattgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgcctctgtgat 21860879  T
Q  207 gttgtgggagtttgctagc-nnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggactt-aaggctttgctgagagcg 304  Q
    |||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  21860880 gttgtgggagtttgctagcttttttttcggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaaaggatttgctgagagcg 21860979  T
Q  305 cggttttagaaacaatgacaattctcacgataattc 340  Q
    |||||||||||||||||||||||||||| |||||||    
T  21860980 cggttttagaaacaatgacaattctcactataattc 21861015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 7 - 288
Target Start/End: Original strand, 11153972 - 11154253
Alignment:
Q  7 caattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttgannnnnnnn 106  Q
    ||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||  |||||| ||| ||||||||| ||||||||||||||            
T  11153972 caattttcgtgagaatcatcgtcattcgtttgattttaaatatcgtgagaattgcctttatttccagtaccacatcaggtatggtgacttgatttttctt 11154071  T
Q  107 nnnnnnnnnnnnnnncttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgat 206  Q
                   ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||| |||||||    
T  11154072 tttgatttgatttttcttggttctgaggtagttaattataacaattgagtaagtcatccgttgtactttgaggactgctagcaggtgttgccgctgtgat 11154171  T
Q  207 gttgtgggagtttgctagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    |||||||||||||||||||        |||| |||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  11154172 gttgtgggagtttgctagcatttttttggttgctgctgaaatggttatgtaatgaggcttttgttcttttgtttggacttaa 11154253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 7 - 288
Target Start/End: Original strand, 954926 - 955207
Alignment:
Q  7 caattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttgannnnnnnn 106  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||||||||||| |||||||| || ||||| ||| ||||||| ||||||            
T  954926 caatttttgtgagaatcgtcatcgttcgtttgatttcaaatatcgtgagaattgccgttatttatagtaccacgtcaggtatggtaacttgatttttctt 955025  T
Q  107 nnnnnnnnnnnnnnncttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgat 206  Q
                   ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  ||| || |||||||||||  ||||||    
T  955026 tttgatttgatttttcttggttgtgaggtagttaattataacaattgagtaagtcatccgttgtactttgagggctgataacaggtgttgccgttgtgat 955125  T
Q  207 gttgtgggagtttgctagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    |||||||||||||||||||        |||| |||||||||||||||||| |||||| ||||||| |||| |||||||||||    
T  955126 gttgtgggagtttgctagcatttctttggttgctgctgaaatggttatgtgatgaggcttttgttattttatttggacttaa 955207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 122 - 288
Target Start/End: Complemental strand, 28579225 - 28579059
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||| ||||| |||||||||||| |||    
T  28579225 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagggctgctagcaggtgttgccgctgtgttgttgtgggagtctgc 28579126  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||        |||| |||||||||||||||||| |||||  ||||||||||||||||||||||||    
T  28579125 tagcatatttttggttgctgctgaaatggttatgtgatgagacttttgttcttttgtttggacttaa 28579059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 122 - 288
Target Start/End: Complemental strand, 23573684 - 23573519
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||  |||||||||||||||||||||    
T  23573684 cttggttgtgaggtagttaattataacaattgagtaaatcatctgttgtactttgagggctgttagcaggtgttgccgttgtgatgttgtgggagtttgc 23573585  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||        |||| ||||||||||||||||||  ||| | |||||||||||| |||||||||||    
T  23573584 tagcatttttt-ggttgctgctgaaatggttatgtggtgatgcttttgttcttttatttggacttaa 23573519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 7 - 217
Target Start/End: Complemental strand, 25118994 - 25118784
Alignment:
Q  7 caattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttgannnnnnnn 106  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||  ||||||| ||| ||||| ||| ||||||||||||||            
T  25118994 caattttcgtgagaatcgtcgtcattcgtttgattccaaatatcgtgagaattgtcgttatttccagtaccacgtcaggtatggtgacttgatttttctt 25118895  T
Q  107 nnnnnnnnnnnnnnncttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgat 206  Q
                   ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||| |||||||    
T  25118894 tttgatttgatttttcttggttgtgatgtagttaattataacaattgagtaagtcatctgttgtactttgagggctgctagcaggtgttgccgctgtgat 25118795  T
Q  207 gttgtgggagt 217  Q
    |||||||||||    
T  25118794 gttgtgggagt 25118784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 122 - 288
Target Start/End: Original strand, 4589277 - 4589443
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||| |||||| |||||| ||||| |||||||||||||  ||| |||||||||||||| ||||||||||||||||||||||    
T  4589277 cttggttgtgaggtagttaattaaaacaatcgagtaaatcatccgttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtgggagtttgc 4589376  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||        ||||  |||||||||| |||||| |||||| |||||||||||| |||||||||||    
T  4589377 tagcatttttttggttgttgctgaaatgattatgtgatgaggcttttgttcttttatttggacttaa 4589443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 126 - 288
Target Start/End: Original strand, 11837051 - 11837213
Alignment:
Q  126 gttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgctagc 225  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||||||||  ||| |||||||||||||| ||||||||||||||| |||||||||     
T  11837051 gttgtgaggtagttaattataacaattgagtaaatcatccgttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtgggtgtttgctaga 11837150  T
Q  226 nnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
            |||| |||||||||||||||||| |||||  |||||||||||| |||||||||||    
T  11837151 atttttttggttgctgctgaaatggttatgtgatgagtcttttgttcttttatttggacttaa 11837213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 122 - 288
Target Start/End: Complemental strand, 14104614 - 14104448
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||   || |||||||||||||| ||||||||||||||||||||||    
T  14104614 cttggttgtgaggtagttaattataacaattgagtaaatcatccgttgtactttgagggttgctagcaggtgttgccgctgtgatgttgtgggagtttgc 14104515  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    | ||        ||||  ||||||||||||||||| |||||  |||||||||||| |||||||||||    
T  14104514 tcgcatttttttggttgttgctgaaatggttatgtgatgagacttttgttcttttatttggacttaa 14104448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 122 - 288
Target Start/End: Complemental strand, 27783090 - 27782924
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||  ||| |||||||||||||| |||||||||||||| |||||||    
T  27783090 cttggttgtgaggtagttaattataacaattgagtaaatcattcgttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtggaagtttgc 27782991  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||        ||||  |||| |||||||||| | |||||| |||||||||||| |||||||||||    
T  27782990 tagcatttttttggttgttgctaaaatggttatttgatgaggcttttgttcttttatttggacttaa 27782924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 122 - 288
Target Start/End: Complemental strand, 24083743 - 24083575
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    |||||||||||||||||||||||||| |||||||||||||||| |   ||||||||| |||  |||||| ||||||| ||   |||||||||||||||||    
T  24083743 cttggttgtgaggtagttaattataataattgagtaagtcatccgccatactttgaggactactagcagatgttgccgcttcaatgttgtgggagtttgc 24083644  T
Q  222 tagc--nnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||         ||||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  24083643 tagcattttttttcggttgctgctgaaatggttatgtcatgaggcttttgttcttttgtttgaacttaa 24083575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 15288404 - 15288495
Alignment:
Q  7 caattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||| ||| ||||| ||||||||    
T  15288404 caattttcatgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgtcgttatttccagaaccacgtcaggtatgatgacttga 15288495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 122 - 281
Target Start/End: Complemental strand, 27440519 - 27440371
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    |||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||  ||| ||| ||||||           ||||||||||||||||    
T  27440519 cttggttgtgaggtagttaattataacaattgggtaaatcatccgttgtactttgagggctgctagtaggtgt-----------tgttgtgggagtttgc 27440431  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttg 281  Q
    ||||        |||| |||||||||||||||||| |||||| |||||||||||| ||||    
T  27440430 tagcatttttttggttgctgctgaaatggttatgtgatgaggcttttgttcttttatttg 27440371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 122 - 225
Target Start/End: Original strand, 15288501 - 15288604
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    |||| ||||||||||||||||||||||||||||||||||| || ||| ||||||||  |||| || | | |||||||| |  |||||||||||||||||     
T  15288501 cttgattgtgaggtagttaattataacaattgagtaagtcgtccgttttactttgaagactgctaactgttgttgccatttcgatgttgtgggagtttga 15288600  T
Q  222 tagc 225  Q
    ||||    
T  15288601 tagc 15288604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 28579318 - 28579231
Alignment:
Q  7 caattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||||||||||||||||||||||||||||||||| |||    |||||||||||  ||||||| ||| ||||| ||| ||||||||||||||    
T  28579318 caattttcgtgagaatcgtcgtcgttcgtttgattccaa----cgtgagaattgtcgttatttccagtaccacgtcaggtatggtgacttga 28579231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 25110044 - 25109994
Alignment:
Q  238 actgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||||||||| ||||||| |||||| ||||||||||||||||||||||||    
T  25110044 actgctgaaatagttatgtgatgaggcttttgttcttttgtttggacttaa 25109994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 98
Target Start/End: Original strand, 4589210 - 4589271
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||||||||||||||||||||||| ||||||| ||| || || ||| ||||| ||||||||    
T  4589210 tgatttcaaatatcgtgagaattgccgttatttccagtacaacgtcaggtatgatgacttga 4589271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 98
Target Start/End: Complemental strand, 14104686 - 14104625
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    |||||| |||||||||||||||||||||||||| ||| || || ||| ||||| ||||||||    
T  14104686 tgattttaaatatcgtgagaattgctgttatttccagtacaacgtcaggtatgatgacttga 14104625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 69
Target Start/End: Complemental strand, 27783171 - 27783139
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttattt 69  Q
    |||||||||||||||||||||||||||||||||    
T  27783171 tgatttcaaatatcgtgagaattgctgttattt 27783139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 98
Target Start/End: Original strand, 11836961 - 11837022
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||||||||||||||||||||||  ||||||| ||| || || ||| ||||| ||||||||    
T  11836961 tgatttcaaatatcgtgagaattgtcgttatttccagtacaacgtcaggtatgatgacttga 11837022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 339
Target Start/End: Complemental strand, 14104349 - 14104316
Alignment:
Q  306 ggttttagaaacaatgacaattctcacgataatt 339  Q
    |||| |||||||||||||||||||||||||||||    
T  14104349 ggttctagaaacaatgacaattctcacgataatt 14104316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 98
Target Start/End: Complemental strand, 23573769 - 23573708
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||||||||||||||||||||||| ||||||| ||| || || ||| ||||  ||||||||    
T  23573769 tgatttcaaatatcgtgagaattgccgttatttccagtacaacgtcaggtataatgacttga 23573708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 69
Target Start/End: Complemental strand, 16918867 - 16918835
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttattt 69  Q
    ||||||||||||||||||||||||| |||||||    
T  16918867 tgatttcaaatatcgtgagaattgccgttattt 16918835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Complemental strand, 23573426 - 23573390
Alignment:
Q  303 cgcggttttagaaacaatgacaattctcacgataatt 339  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  23573426 cgcggttctagaaacaacgacaattctcacgataatt 23573390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Complemental strand, 23580638 - 23580602
Alignment:
Q  303 cgcggttttagaaacaatgacaattctcacgataatt 339  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  23580638 cgcggttctagaaacaacgacaattctcacgataatt 23580602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Complemental strand, 27438758 - 27438722
Alignment:
Q  303 cgcggttttagaaacaatgacaattctcacgataatt 339  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  27438758 cgcggttctagaaacaacgacaattctcacgataatt 27438722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 161; Significance: 8e-86; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 7 - 331
Target Start/End: Complemental strand, 12768904 - 12768578
Alignment:
Q  7 caattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttgannnnnnnn 106  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||            
T  12768904 caattttcgtgagaatcgtcgtcgttcgtttgattccaaatatcgtgagaattgccgttatttccagaaccacatcaagtatggtgacttgatttttctt 12768805  T
Q  107 nnnnnnnnnnnnnnncttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgat 206  Q
                   ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||  |||||||    
T  12768804 tttgatttgatttttcttggttgtgaggtagttaattataacaattgagtaagtcatccgttgtactttgaggactgttagcaggtgttgcagctgtgat 12768705  T
Q  207 gttgtgggagtttgctag-cnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggactt-aaggctttgctgagagcg 304  Q
    ||||||||||||||||||         | ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| ||| || |    
T  12768704 gttgtgggagtttgctagttttttttccagttactgctgaaatggttatgtcatgaggcttttgttcttttgtttggacttaaaggctttgttgatagtg 12768605  T
Q  305 cggttttagaaacaatgacaattctca 331  Q
    ||||| ||||||||| |||||||||||    
T  12768604 cggttctagaaacaacgacaattctca 12768578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 7 - 288
Target Start/End: Complemental strand, 35955156 - 35954875
Alignment:
Q  7 caattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttgannnnnnnn 106  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||  ||||||| ||| ||||| ||| ||||||||||||||            
T  35955156 caattttcgtgagaatcatcgtcgttcgtttgattccaaatatcgtgagaattgtcgttatttccagtaccacgtcaggtatggtgacttgatttttctt 35955057  T
Q  107 nnnnnnnnnnnnnnncttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgat 206  Q
                   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||  ||||||    
T  35955056 ttttatttgatttttcttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagggctgctagcaggtgttgccgttgtgat 35954957  T
Q  207 gttgtgggagtttgctagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||||||||| |||||||        |||| |||||||||| ||||||| |||||| ||||||||||||||||||||||||    
T  35954956 gttgtgggagtctgctagcatttttttggttgctgctgaaatagttatgtgatgaggcttttgttcttttgtttggacttaa 35954875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 7 - 288
Target Start/End: Complemental strand, 36731403 - 36731122
Alignment:
Q  7 caattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttgannnnnnnn 106  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||  ||||||| ||| ||||| ||| ||||||||||||||            
T  36731403 caattttcgtgagaatcctcgtcgttcgtttgattccaaatatcgtgagaattgtcgttatttccagtaccacgtcaggtatggtgacttgatttttctt 36731304  T
Q  107 nnnnnnnnnnnnnnncttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgat 206  Q
                   ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||| |||||| ||||||| |||||||    
T  36731303 tttgatttgatttttcttggttgtgaagtagttaattataacaattgagtaagtcatctgttgtactttgagggctgctagcagctgttgccgctgtgat 36731204  T
Q  207 gttgtgggagtttgctagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||||||||| |||||||        |||| |||||||||||||||| | |||||||||||||||||||||||||||||||    
T  36731203 gttgtgggagtctgctagcatttttttggttgctgctgaaatggttatctgatgaggtttttgttcttttgtttggacttaa 36731122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 7 - 295
Target Start/End: Original strand, 29648952 - 29649241
Alignment:
Q  7 caattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttgannnnnnnn 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||| || |||||| ||| |||  |||||||||            
T  29648952 caattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgataattgtcgttatttccataaccacgtcaggtacagtgacttgatttttctt 29649051  T
Q  107 nnnnnnnnnnnnnnncttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgat 206  Q
                   |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||  |||||||    
T  29649052 tttgatttgatttttcttggttgtgaggtagttaattattacaattgagtaagtcatctgttgtactttgaggactgctagcaggtgttgctgctgtgat 29649151  T
Q  207 gttgtgggagtttgctagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggactta-aggctttg 295  Q
    |||||||||||||||||||       || || |||||||||||||||||| |||||| |||||||  |||||||||| ||| ||||||||    
T  29649152 gttgtgggagtttgctagcattttttcgcttgctgctgaaatggttatgttatgaggcttttgtttgtttgtttggaattagaggctttg 29649241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 127 - 288
Target Start/End: Complemental strand, 46118857 - 46118696
Alignment:
Q  127 ttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgctagcn 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| ||  ||||||||||||||||||||||     
T  46118857 ttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgaggactgctagcaggtgttgccgcttcgatgttgtgggagtttgctagca 46118758  T
Q  227 nnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
          ||||| ||||||||||||||||||||||||| ||||||||| ||||||||| ||||    
T  46118757 ttttttcggttgctgctgaaatggttatgtcatgaggcttttgttctcttgtttggatttaa 46118696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 122 - 288
Target Start/End: Complemental strand, 5327333 - 5327167
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| |||| ||||||||| |||||||||    
T  5327333 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgaggactgctagcaggtgttgtcactatgatgttgt-ggagtttgc 5327235  T
Q  222 tagcnnnnnnnc-ggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||       | |||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  5327234 tagcattttttcgggttgctgctgaaatggttatgtcatgaggcttttgttcttttgtttgtacttaa 5327167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 122 - 288
Target Start/End: Complemental strand, 7153546 - 7153380
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||  ||| |||||||||||||| ||||||||||||||||||||||    
T  7153546 cttggttgtgaggtagttaattataacaattgagtaaatcatccgttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtgggagtttgc 7153447  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||        |||| |||||||||||||||||| |||||| |||||||||||| |||||||||||    
T  7153446 tagcatttttttggttgctgctgaaatggttatgtgatgaggcttttgttcttttatttggacttaa 7153380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 122 - 288
Target Start/End: Complemental strand, 24781686 - 24781521
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  ||| |||||||||||||| |||||||||||| |||||||||    
T  24781686 cttggttgtgaggtagttaattataacaattgagtaa-tcatctgttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtaggagtttgc 24781588  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||        |||| |||||||||||||||||| |||||| |||||||||||| |||||||||||    
T  24781587 tagcatttttttggttgctgctgaaatggttatgtgatgaggcttttgttcttttatttggacttaa 24781521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 7 - 295
Target Start/End: Original strand, 33005721 - 33006015
Alignment:
Q  7 caattttcgtgagaa---tcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttgannnnn 103  Q
    |||||||||||||||   ||||| ||||||||||||||| ||||||| |||||||||  ||||||| ||||||||||||| ||||||||||||||         
T  33005721 caattttcgtgagaaatatcgtcatcgttcgtttgattttaaatatcttgagaattgtcgttatttccagaaccacatcacgtatggtgacttgattttt 33005820  T
Q  104 nnnnnnnnnnnnnnnnnncttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgt 203  Q
                      ||||||||||| ||||||||||||| ||||||||||||||||| ||| ||||||||  |||| |||||||||||||| ||||    
T  33005821 ctttttgatttgatttttcttggttgtgaagtagttaattatatcaattgagtaagtcatccgttatactttgatgactgctagcaggtgttgccgctgt 33005920  T
Q  204 gatgttgtgggagtttgctag--cnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggac-ttaaggctttg 295  Q
    |||||||||||||||| ||||  |       | ||| ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  33005921 gatgttgtgggagtttactagctctttttttctgttgctgctgaaatggttatgtcatgaggcttttgttcttttgtttggactttaaggctttg 33006015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 8 - 288
Target Start/End: Complemental strand, 51087456 - 51087176
Alignment:
Q  8 aattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttgannnnnnnnn 107  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||||||||  ||||||| ||| ||||| |||  ||||||||||| |             
T  51087456 aattttcgtgagaatcgacgtcgttcgtttgattccaaatatcgtgagaattgtcgttatttccagtaccacgtcagatatggtgacttaatttttattt 51087357  T
Q  108 nnnnnnnnnnnnnncttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatg 207  Q
                  |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||| ||||||||||||||  ||||||     
T  51087356 ttgatttaatttttcttggttgtgaggtagttaattataacaattgagtaagtcatgtgttgtactttgagggctgctagcaggtgttgccgttgtgatt 51087257  T
Q  208 ttgtgggagtttgctagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    |||||||||| |||||||        |||| |||||||||| ||||||| |||||  ||||||||||||||||||||||||    
T  51087256 ttgtgggagtctgctagcatttttttggttgctgctgaaattgttatgtgatgagacttttgttcttttgtttggacttaa 51087176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 127 - 288
Target Start/End: Original strand, 30302407 - 30302569
Alignment:
Q  127 ttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgctagc- 225  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||||||||| ||  ||||||||||||||||||||||     
T  30302407 ttgtgaggtagttaattataacaattgagtaagtcatctattgtactttgaggactgctagcaggtgttgccgcttcgatgttgtgggagtttgctagca 30302506  T
Q  226 nnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
           ||||| ||  ||||||||||||||||||||| ||||||||||||||||||||||||    
T  30302507 tttttttcggttgctattgaaatggttatgtcatgaggcttttgttcttttgtttggacttaa 30302569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 122 - 288
Target Start/End: Original strand, 29521389 - 29521555
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||  |||||  ||| |||||||||||||| |||||||||| ||||||| |||    
T  29521389 cttggttgtgaggtagttaattgtaacaattgagtaagtcatctgttgtatattgagggctgctagcaggtgttgccgctgtgatgttatgggagtctgc 29521488  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||        |||| |||||||||||||||||| |||||| ||||||||||||||||| ||||||    
T  29521489 tagcatttttttggttgctgctgaaatggttatgtgatgaggcttttgttcttttgtttgaacttaa 29521555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 122 - 288
Target Start/End: Original strand, 44511807 - 44511973
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||  ||| |||||||||||||| ||||||||||||||||||||||    
T  44511807 cttggttgtgaggtagttaattataacaattgagtaaatcatccgttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtgggagtttgc 44511906  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    || |        |||| |||||||||||||||||| || ||  |||||||||||| |||||||||||    
T  44511907 tatcatttttttggttgctgctgaaatggttatgtgataagacttttgttcttttatttggacttaa 44511973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 122 - 288
Target Start/End: Complemental strand, 10773357 - 10773191
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||||||||||||||| ||||  ||||||||||| |  ||| |||||||||||||| ||||||||||||||| ||||||    
T  10773357 cttggttgtgaggtagttaattataacaattgagtaaatcattcgttgtactttgggggctgctagcaggtgttgccgctgtgatgttgtgggtgtttgc 10773258  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||        ||||  | ||||||||||||||| |||||| |||||||||||| |||||||||||    
T  10773257 tagcatttttttggttgttactgaaatggttatgtgatgaggcttttgttcttttatttggacttaa 10773191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 122 - 288
Target Start/End: Complemental strand, 33705226 - 33705060
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||  ||| |||||||||||||| ||||||||||||||| ||||||    
T  33705226 cttggttgtgaggtagttaattataacaattgagtaaatcatccgttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtgggtgtttgc 33705127  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||        ||||  | |||||||  |||||| |||||| |||||||||||| |||||||||||    
T  33705126 tagcatttttttggttgtttctgaaatttttatgtgatgaggcttttgttcttttatttggacttaa 33705060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 123 - 288
Target Start/End: Complemental strand, 25656462 - 25656301
Alignment:
Q  123 ttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgct 222  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||||| | | |||||||||||||||||||||||    
T  25656462 ttggttgtgaggtagttaattataacaattgagtaagtcatctattgtactttgaggactgctagcaggtgtcg-cgctgtgatgttgtgggagtttgct 25656364  T
Q  223 agc-nnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    |||        ||||| |||||||||||||||||| |||||| |    |||||||||||||||||||    
T  25656363 agcatttttttcggttgctgctgaaatggttatgtgatgaggct----ttcttttgtttggacttaa 25656301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 122 - 288
Target Start/End: Complemental strand, 36308468 - 36308298
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaac----tgttagcaggtgttgccactgtgatgttgtgggagt 217  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||  |     | ||||||||||||||  |||||||||||||||||    
T  36308468 cttggttgtgaggtagttaattataacaattgagtaaatcatccgttgtactttgagggccgctagctagcaggtgttgccgttgtgatgttgtgggagt 36308369  T
Q  218 ttgctagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||||||        |||| |||||||||||||||||| |||||| |||||||||||| |||||||||||    
T  36308368 ttgctagcatttttttggttgctgctgaaatggttatgttatgaggcttttgttcttttatttggacttaa 36308298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 122 - 288
Target Start/End: Original strand, 14488205 - 14488371
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    |||||||||||||||||||||||||||||||||| || ||||| |||||| ||||||  ||  ||||||||||| || ||||||||||||||||||||||    
T  14488205 cttggttgtgaggtagttaattataacaattgagaaaatcatccgttgtattttgagggctaatagcaggtgttaccgctgtgatgttgtgggagtttgc 14488304  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||        ||||  ||||||||||||||||| |||||| |||||||||||| ||| |||||||    
T  14488305 tagcatttttttggttgttgctgaaatggttatgtgatgaggcttttgttcttttatttagacttaa 14488371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 123 - 288
Target Start/End: Complemental strand, 52405224 - 52405058
Alignment:
Q  123 ttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgct 222  Q
    |||||| ||||||| |||||||||| ||||||||||||||| |||||||||||||| |||| ||| |||||||||| |||||||||  | ||||||||||    
T  52405224 ttggttatgaggtaattaattataataattgagtaagtcatttgttgtactttgaggactgctagtaggtgttgccgctgtgatgtgtttggagtttgct 52405125  T
Q  223 agc-nnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    |||        || || ||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  52405124 agcatttttttcgattgctgctgaaatggttaagtcatgaggcttttgttcttttgtttggacttaa 52405058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 123 - 288
Target Start/End: Complemental strand, 52406657 - 52406491
Alignment:
Q  123 ttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgct 222  Q
    |||||| ||||||| |||||||||| ||||||||||||||| |||||||||||||| |||| ||| |||||||||| |||||||||  | ||||||||||    
T  52406657 ttggttatgaggtaattaattataataattgagtaagtcatttgttgtactttgaggactgctagtaggtgttgccgctgtgatgtgtttggagtttgct 52406558  T
Q  223 agc-nnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    |||        || || ||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  52406557 agcatttttttcgattgctgctgaaatggttaagtcatgaggcttttgttcttttgtttggacttaa 52406491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 122 - 217
Target Start/End: Complemental strand, 7556813 - 7556718
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagt 217  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||| ||||||||||||||||||    
T  7556813 cttggttgtgatgtagttaattataacaattgagtaagtcatctgttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtgggagt 7556718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 122 - 288
Target Start/End: Complemental strand, 48128401 - 48128236
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    |||||||||||| |||||||||||||||||||||||| ||||| |||||| ||||||   || |||||||||||||| ||  ||||||||||||||||||    
T  48128401 cttggttgtgag-tagttaattataacaattgagtaaatcatccgttgtaatttgagggttgctagcaggtgttgccgctacgatgttgtgggagtttgc 48128303  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||        |||| |||||||||||||||||| || | | |||||||||||| |||||||||||    
T  48128302 tagcatttttttggttgctgctgaaatggttatgtgataaagcttttgttcttttatttggacttaa 48128236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 5327449 - 5327358
Alignment:
Q  7 caattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    |||||||| |||||||||||||||||||||||||| ||||||| |||||||||| |||||||| ||||||||||||||||||||| ||||||    
T  5327449 caattttcatgagaatcgtcgtcgttcgtttgattccaaatattgtgagaattgttgttatttccagaaccacatcaagtatggtaacttga 5327358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 30302288 - 30302379
Alignment:
Q  7 caattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    |||||||||||| ||||||| |||||||||||||| ||||||||||||||||||| ||||||| ||||||||| ||| |||||||| |||||    
T  30302288 caattttcgtgaaaatcgtcatcgttcgtttgattccaaatatcgtgagaattgccgttatttccagaaccacgtcaggtatggtggcttga 30302379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 46118975 - 46118884
Alignment:
Q  7 caattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    |||||||||||| |||||||||||||| |||||||  |||||||||||||||| | ||||||| | ||||||| ||| ||||||||||||||    
T  46118975 caattttcgtgaaaatcgtcgtcgttcatttgattctaaatatcgtgagaattaccgttatttcctgaaccacgtcaggtatggtgacttga 46118884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 11 - 98
Target Start/End: Complemental strand, 52405318 - 52405231
Alignment:
Q  11 tttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    |||||||||||||||| |||||||||||||| ||||||| ||||||||||  |||||||  |||||||| ||| ||||||||||||||    
T  52405318 tttcgtgagaatcgtcatcgttcgtttgattccaaatattgtgagaattgtcgttatttctagaaccacgtcaggtatggtgacttga 52405231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 11 - 98
Target Start/End: Complemental strand, 52406751 - 52406664
Alignment:
Q  11 tttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    |||||||||||||||| |||||||||||||| ||||||| ||||||||||  |||||||  |||||||| ||| ||||||||||||||    
T  52406751 tttcgtgagaatcgtcatcgttcgtttgattccaaatattgtgagaattgtcgttatttctagaaccacgtcaggtatggtgacttga 52406664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 25656576 - 25656486
Alignment:
Q  8 aattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||||||||||||||||| ||||| |||| |||  |||||||||||||||||  ||||||| ||| ||||| ||||||||| ||| ||||    
T  25656576 aattttcgtgagaatcgtcatcgtttgtttaattctaaatatcgtgagaattgtcgttatttccagtaccacgtcaagtatgttgatttga 25656486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 8 - 93
Target Start/End: Original strand, 29521275 - 29521360
Alignment:
Q  8 aattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtga 93  Q
    ||||||||||||||||||||| |||||||||||| |||||||| |||||||||   ||||||  || ||||| ||| |||||||||    
T  29521275 aattttcgtgagaatcgtcgttgttcgtttgattccaaatatcatgagaattgtcattatttctagtaccacgtcaggtatggtga 29521360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 98
Target Start/End: Complemental strand, 7153631 - 7153570
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||||||||||||||||||||||| ||||||| ||| || || ||| ||||| ||||||||    
T  7153631 tgatttcaaatatcgtgagaattgccgttatttccagtacaacgtcaggtatgatgacttga 7153570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 239 - 288
Target Start/End: Complemental strand, 7556692 - 7556643
Alignment:
Q  239 ctgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    |||||||||||||||||| |||||| ||||||| |||||||| |||||||    
T  7556692 ctgctgaaatggttatgtgatgaggcttttgtttttttgttttgacttaa 7556643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 122 - 155
Target Start/End: Original strand, 14536794 - 14536827
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgag 155  Q
    ||||||||||||||||||||||||||||||||||    
T  14536794 cttggttgtgaggtagttaattataacaattgag 14536827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 303 - 339
Target Start/End: Complemental strand, 36308205 - 36308169
Alignment:
Q  303 cgcggttttagaaacaatgacaattctcacgataatt 339  Q
    ||||||||||||||||| |||||||||||||||||||    
T  36308205 cgcggttttagaaacaacgacaattctcacgataatt 36308169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 98
Target Start/End: Complemental strand, 10773442 - 10773381
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||||||||||||||||||||||  ||||||| ||| || || ||| ||||| ||||||||    
T  10773442 tgatttcaaatatcgtgagaattgtcgttatttccagtacaacgtcaggtatgatgacttga 10773381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 98
Target Start/End: Complemental strand, 24781771 - 24781710
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    |||||||||||||| |||||||||| ||||||| ||| || || ||| ||||| ||||||||    
T  24781771 tgatttcaaatatcatgagaattgccgttattttcagtacaacgtcaggtatgatgacttga 24781710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 98
Target Start/End: Original strand, 44511727 - 44511788
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||||||||||||||||||||||| |||||||  || || || ||| ||||| ||||||||    
T  44511727 tgatttcaaatatcgtgagaattgccgttatttttagtacaacgtcaggtatgatgacttga 44511788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 98
Target Start/End: Complemental strand, 48128486 - 48128425
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||||||||||||||||||||||| ||||||| ||| || || |||  |||| ||||||||    
T  48128486 tgatttcaaatatcgtgagaattgccgttattttcagtacaacgtcagttatgatgacttga 48128425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Complemental strand, 7153287 - 7153251
Alignment:
Q  303 cgcggttttagaaacaatgacaattctcacgataatt 339  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  7153287 cgcggttctagaaacaacgacaattctcacgataatt 7153251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Complemental strand, 10773096 - 10773060
Alignment:
Q  303 cgcggttttagaaacaatgacaattctcacgataatt 339  Q
    ||||||| || ||||||||||||||||||||||||||    
T  10773096 cgcggttctaaaaacaatgacaattctcacgataatt 10773060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Original strand, 14488468 - 14488504
Alignment:
Q  303 cgcggttttagaaacaatgacaattctcacgataatt 339  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  14488468 cgcggttctagaaacaacgacaattctcacgataatt 14488504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 36308553 - 36308517
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttatttacag 73  Q
    ||||||||||||||||||||||||| ||||||| |||    
T  36308553 tgatttcaaatatcgtgagaattgccgttatttccag 36308517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 144; Significance: 1e-75; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 7 - 339
Target Start/End: Original strand, 3851090 - 3851426
Alignment:
Q  7 caattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttgannnnnnnn 106  Q
    ||||||| ||||||||||||||||||||||||||| |||| |||||||||||||| ||||||| ||||||||| ||||||||||||||||||            
T  3851090 caatttttgtgagaatcgtcgtcgttcgtttgattccaaaaatcgtgagaattgccgttatttccagaaccacgtcaagtatggtgacttgatttttatt 3851189  T
Q  107 nnnnnnnnnnnnnnncttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgat 206  Q
                   ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||    
T  3851190 tttgatttgatttttcttggttgtgaggtaattaattataacaattgagtaagtcatccgttgtactttgaggactgttagcaggtgttgccgctgtgat 3851289  T
Q  207 gttgtgggagtttgctag--cnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggactt-aaggcttt-gctgagag 302  Q
    ||||||||||||||||||          |||||||||||||||||||||| |||||||| |||||||||||||||||||||| |||||||| ||||| ||    
T  3851290 gttgtgggagtttgctagttttttttttcggttactgctgaaatggttatatcatgaggcttttgttcttttgtttggacttaaaggctttggctgatag 3851389  T
Q  303 cgcggttttagaaacaatgacaattctcacgataatt 339  Q
     |||||| ||||||||| ||||| |||||| ||||||    
T  3851390 tgcggttctagaaacaacgacaaatctcactataatt 3851426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 7 - 288
Target Start/End: Original strand, 3754230 - 3754512
Alignment:
Q  7 caattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttgannnnnnnn 106  Q
    ||||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||| ||||||||| ||||||||||||||||||            
T  3754230 caattttcgtgagaatcgtcgtcgttcgtttgattccaaatatcatgagaattgccgttatttccagaaccacgtcaagtatggtgacttgatttttctt 3754329  T
Q  107 nnnnnnnnnnnnnnncttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgat 206  Q
                   ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||| |||||||||   |||||    
T  3754330 tttgatttgatttttcttggttgtgaggtagttaattataacaattgagtaagtcatccgttgtactttgaggactattagccggtgttgccgtggtgat 3754429  T
Q  207 gttgtgggagtttgctagc-nnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    |||||||||||||||||||        ||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||    
T  3754430 gttgtgggagtttgctagcttttttttcggttactgctgaaatggttatgtcatgagacttttgttcttttgtttgaacttaa 3754512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 7 - 288
Target Start/End: Original strand, 2291592 - 2291873
Alignment:
Q  7 caattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttgannnnnnnn 106  Q
    ||||||||||||||||| ||||||||||||||||| |||||||| |||||||||  ||||||| ||| ||||| ||| ||||||||||||||            
T  2291592 caattttcgtgagaatcctcgtcgttcgtttgattccaaatatcttgagaattgtcgttatttccagtaccacgtcaggtatggtgacttgatttttctt 2291691  T
Q  107 nnnnnnnnnnnnnnncttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgat 206  Q
                   ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| |||||||    
T  2291692 ttcgatttgatttttcttggttgtgaagtagttaattataacaattgagtaagtcatctgttgtactttgaggactgctagcaggtgttgccgctgtgat 2291791  T
Q  207 gttgtgggagtttgctagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||||||||| |||||||        |||| |||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  2291792 gttgtgggagtctgctagcatttttttggttgctgctgaaatggttatgtgatgaggcttttgttcttttgtttggacttaa 2291873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 122 - 339
Target Start/End: Original strand, 39774574 - 39774803
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  39774574 cttggttgtgagttagttaattataacaattgagtaagtcatctgttgtactttgaggactgttagcaggtgttgccgctgtgatgttgtgggagtttgc 39774673  T
Q  222 tagc----------nnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaaggcttt--gctgagagcgcggtt 309  Q
    ||||                 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||  ||||| || ||||||    
T  39774674 tagctttttttctttcttttccggttactgctgaaatggttatgtcatgaggcttttgttcttttgtttggacttaaaggttttggctgatagtgcggtt 39774773  T
Q  310 ttagaaacaatgacaattctcacgataatt 339  Q
     ||||||||| |||||||||||| ||||||    
T  39774774 ctagaaacaacgacaattctcactataatt 39774803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 7 - 288
Target Start/End: Original strand, 1054435 - 1054715
Alignment:
Q  7 caattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttgannnnnnnn 106  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||| ||| ||||| | | ||||||||||||||            
T  1054435 caattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatgatgagaattgccgttatttccagtaccacgtaaggtatggtgacttgatttttctt 1054534  T
Q  107 nnnnnnnnnnnnnnncttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgat 206  Q
                   ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||  ||| |||||| ||||||| |||||||    
T  1054535 tttgattttatttttcttggttgtgaggtagttaattataacaattgagtaagtcatccgttgtattttgagggctgctagcagatgttgccgctgtgat 1054634  T
Q  207 gttgtgggagtttgctagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    |||||||||||||||||||        |||| |||||||||||||||| | |||| | ||||||||||||||||||||||||    
T  1054635 gttgtgggagtttgctagcatttatttggttgctgctgaaatggttatttgatga-gcttttgttcttttgtttggacttaa 1054715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 7 - 288
Target Start/End: Original strand, 4737530 - 4737811
Alignment:
Q  7 caattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttgannnnnnnn 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| | ||  ||| ||||||||||||||            
T  4737530 caattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgccgttatttccagtatcatgtcaggtatggtgacttgatttttctt 4737629  T
Q  107 nnnnnnnnnnnnnnncttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgat 206  Q
                   ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||  ||| |||||| ||||| | |||||||    
T  4737630 tttgatttgatttttcttggttgtgaggtagttaattataacaattgagtaagtcatccgttgtattttgagggctgctagcagatgttgtcgctgtgat 4737729  T
Q  207 gttgtgggagtttgctagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    |||||| ||||||||||||        |||  |||||||||||||||||| |||||| ||||||||||||||||| ||||||    
T  4737730 gttgtgagagtttgctagcatttttttggtagctgctgaaatggttatgtgatgaggcttttgttcttttgtttgaacttaa 4737811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 122 - 339
Target Start/End: Original strand, 42080275 - 42080499
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||||||||||||||||||||   ||||| |||||| |||||||||| |||||||| ||||||||||||||||||||||    
T  42080275 cttggttgtgaggtagttaattataacaattgagtaagtcattcattgtattttgaggactgttagcaagtgttgccgctgtgatgttgtgggagtttgc 42080374  T
Q  222 tagc----nnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttc-ttttgtttggactt-aaggcttt-gctgagagcgcggttttaga 314  Q
    ||||           ||||||||||||||||||||||||||||||| |||||||| |||| ||||||||| |||||||| || || || |||||| ||||    
T  42080375 tagctttttttttttcggttactgctgaaatggttatgtcatgaggcttttgttctttttttttggacttaaaggctttggccgatagtgcggttctaga 42080474  T
Q  315 aacaatgacaattctcacgataatt 339  Q
    ||||| |||||||||||| ||||||    
T  42080475 aacaacgacaattctcactataatt 42080499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 122 - 288
Target Start/End: Original strand, 38281666 - 38281832
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||  ||| |||||||||||||| ||||||| ||||||||||||||    
T  38281666 cttggttgtgaggtagttaattataacaattgagtaaatcatatgttgtactttgagggctgctagcaggtgttgccgctgtgatattgtgggagtttgc 38281765  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||        |||| |||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  38281766 tagcatttttttggttgctgctgaaatggttatgtgatgaggtttttgttcttttatttggacttaa 38281832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 122 - 288
Target Start/End: Original strand, 39966564 - 39966730
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||  ||| |||||||||||||||||||||||||||||||||||||    
T  39966564 cttggttgtgaggtagttaattataacaattgagtaaatcattcgttgtactttgagggctgctagcaggtgttgccactgtgatgttgtgggagtttgc 39966663  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
     |||        |||| |||||||||||||||||| |||||| |||||||||||| |||||||||||    
T  39966664 cagcatttttttggttgctgctgaaatggttatgtgatgaggcttttgttcttttatttggacttaa 39966730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 7 - 288
Target Start/End: Complemental strand, 15153305 - 15153024
Alignment:
Q  7 caattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttgannnnnnnn 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||  |||||| ||| |||   ||||||||||||||||||            
T  15153305 caattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgataattgcctttattttcagtaccgtgtcaagtatggtgacttgatttttctt 15153206  T
Q  107 nnnnnnnnnnnnnnncttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgat 206  Q
                   ||||||| ||||||||||||||||||||||||||||||| ||| ||||||| |||||   || |||||| ||||||| |||||||    
T  15153205 tttgatttgatttttcttggttatgaggtagttaattataacaattgagtaagttatccgttgtacattgagggttgctagcagatgttgccgctgtgat 15153106  T
Q  207 gttgtgggagtttgctagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    |||||||||||||||||||        ||||  ||||||||||||||||| |||||| || |||||||||||||||||||||    
T  15153105 gttgtgggagtttgctagcatttttttggttgatgctgaaatggttatgtgatgaggcttctgttcttttgtttggacttaa 15153024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 126 - 288
Target Start/End: Original strand, 27551009 - 27551172
Alignment:
Q  126 gttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgctagc 225  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||  |||||||||||||||||||||||||    
T  27551009 gttgtgatgtagttaattataacaattgagtaagtcatctgttgtactttgaagactgttagcaggtgttgccgttgtgatgttgtgggagtttgctagc 27551108  T
Q  226 -nnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
            ||||| ||||| | |||||||||| |||||| ||||||||||||||||||||||||    
T  27551109 atttttttcggttgctgctaacatggttatgtgatgaggcttttgttcttttgtttggacttaa 27551172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 122 - 288
Target Start/End: Original strand, 3906309 - 3906475
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||  ||| |||||||||||||| ||||||||||||||||||||||    
T  3906309 cttggttatgaggtagttaattataacaattgagtaaatcatccgttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtgggagtttgc 3906408  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    || |        |||| |||||||||||||||||| |||||  |||||||||||| |||||||||||    
T  3906409 taccatttttttggttgctgctgaaatggttatgtgatgagacttttgttcttttatttggacttaa 3906475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 122 - 288
Target Start/End: Original strand, 37724910 - 37725076
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||| |||||||||||||||||||||| |||||||| |||||||||||||||| ||   || |||||||||||||| || |||||||||||||||||||    
T  37724910 cttggctgtgaggtagttaattataacagttgagtaaatcatctgttgtactttaagggttgctagcaggtgttgccgctatgatgttgtgggagtttgc 37725009  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||        |||| |||||||||||||||||| |||||| |||||||||||| |||||||||||    
T  37725010 tagcatttttttggttgctgctgaaatggttatgtgatgaggcttttgttcttttatttggacttaa 37725076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 7 - 288
Target Start/End: Complemental strand, 6645400 - 6645123
Alignment:
Q  7 caattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttgannnnnnnn 106  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||||||||   ||||||| ||||||||  ||| ||||||||||||||            
T  6645400 caattttcgtgagaatcgtcgtcgttc-tttgattccaaatatcgtgagaattatcgttatttccagaaccatgtcaggtatggtgacttgatttttctt 6645302  T
Q  107 nnnnnnnnnnnnnnncttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgat 206  Q
                   |||||||||||||||||||||||||||||||||||||||||||  |||||||||||| |||  ||| ||||||||||   || ||    
T  6645301 tttgatttgatttttcttggttgtgaggtagttaattataacaattgagtaagtcatccattgtactttgaggactcctagaaggtgttgcc---gt-at 6645206  T
Q  207 gttgtgggagtttgctagc-nnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    |||||||||||||||||||        ||||| ||||||||| ||||||| ||||||| ||||||||||||||||||||||||    
T  6645205 gttgtgggagtttgctagcatttttttcggttgctgctgaaacggttatgccatgaggcttttgttcttttgtttggacttaa 6645123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 8 - 288
Target Start/End: Complemental strand, 15399729 - 15399445
Alignment:
Q  8 aattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttgannnnnnnnn 107  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||||||||  ||||||| ||| ||||| ||| ||||||||||||||             
T  15399729 aattttcgtgagaatcgtcgtcattcgtttgattccaaatatcgtgagaattgtcgttatttccagtaccacgtcaggtatggtgacttgatttttcttt 15399630  T
Q  108 nnnnnnnnnnnnnncttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatg 207  Q
                  ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||   || |||||||||||||| ||||||||    
T  15399629 ttgatttgatttttcttggttgtgatgtatttaattataacaattgagtaagtcatctgttgtactttgagggttgctagcaggtgttgccgctgtgatg 15399530  T
Q  208 ttgtgggagtttgc----tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    |||||||||| | |    ||||        || |  ||||||||||||||||| |||||| ||||||||||||||||||| ||||    
T  15399529 ttgtgggagtctactatatagcatttttttggatgttgctgaaatggttatgtgatgaggcttttgttcttttgtttggaattaa 15399445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 39774477 - 39774568
Alignment:
Q  7 caattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||  ||||||| ||||||||| ||||||||||||||||||    
T  39774477 caattttcgtgagaatcgtcgtcgttcgtttgattccaagtatcgtgagaattgtcgttatttccagaaccacgtcaagtatggtgacttga 39774568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 42080159 - 42080250
Alignment:
Q  7 caattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    |||||||||||| |||||||||||||||||||||| |||||||||||||||||| |||||||   |||||||||||||||||||||||||||    
T  42080159 caattttcgtgataatcgtcgtcgttcgtttgattccaaatatcgtgagaattgttgttattccgagaaccacatcaagtatggtgacttga 42080250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 122 - 288
Target Start/End: Original strand, 39068416 - 39068583
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||| ||||| ||||||||  |||||| | |||||||| | |    
T  39068416 cttggttgtgaggtagttaattataacaattgagtaagtcatgtgttgtactttgagggctgctagcatgtgttgccgttgtgatttcgtgggagtcttc 39068515  T
Q  222 tagc-nnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||         ||||  ||||||||| ||||||| || ||| ||||||||||||||||||||||||    
T  39068516 tagcattttttttggttgttgctgaaattgttatgtgattaggcttttgttcttttgtttggacttaa 39068583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 122 - 276
Target Start/End: Original strand, 77035 - 77189
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||||||||||||  ||| ||| || ||||||| ||||||| ||||||||||| ||    
T  77035 cttggttgcgaggtagttaattataacaattgagtaaatcatctgttgtactttgagggctgctagtagttgttgccgctgtgatattgtgggagttcgc 77134  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttctttt 276  Q
    ||||         ||| |||||||||||||||||| || ||| ||||| ||||||    
T  77135 tagcattttttttgttgctgctgaaatggttatgtgataaggcttttgctctttt 77189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 200 - 288
Target Start/End: Complemental strand, 25224020 - 25223932
Alignment:
Q  200 ctgtgatgttgtgggagtttgctagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||||||||||||||||||||||||        |||| |||||||||||||||||| |||||| |||||||||||| |||||||||||    
T  25224020 ctgtgatgttgtgggagtttgctagcatttttttggttgctgctgaaatggttatgtgatgaggcttttgttcttttatttggacttaa 25223932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 39068298 - 39068359
Alignment:
Q  8 aattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttattt 69  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||||  |||||||    
T  39068298 aattttcgtgagaatcgtcgtcgttcgtttgattcctaatatcgtgagaattgtcgttattt 39068359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 249 - 339
Target Start/End: Original strand, 3754514 - 3754606
Alignment:
Q  249 ggttatgtcatgaggtttttgttcttttgtttggactt-aaggctttg-ctgagagcgcggttttagaaacaatgacaattctcacgataatt 339  Q
    ||||||||||||||  |||||||||||||||||||||| ||||||||| |||| || |||||| ||||||||| ||||||||| || ||||||    
T  3754514 ggttatgtcatgagacttttgttcttttgtttggacttaaaggctttgactgatagtgcggttctagaaacaacgacaattcttactataatt 3754606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 28391246 - 28391295
Alignment:
Q  7 caattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgaga 56  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  28391246 caattttcgtgagaatcgtcgtcgttcgtttgattccaaatattgtgaga 28391295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 27550908 - 27550998
Alignment:
Q  8 aattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||||||||||||||||||||||| ||||||||  ||||||| ||||||||   |||||||  || ||||| |||| |||||||| ||||    
T  27550908 aattttcgtgagaatcgtcgtcgtttgtttgattcaaaatatcatgagaattatcgttatttctagtaccacgtcaaatatggtgatttga 27550998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 98
Target Start/End: Original strand, 76950 - 77011
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||||||||||||||||||||||| |||||||  || || |||||| ||||| ||||||||    
T  76950 tgatttcaaatatcgtgagaattgccgttatttcgagtacaacatcaggtatgatgacttga 77011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 60
Target Start/End: Original strand, 40494933 - 40494986
Alignment:
Q  7 caattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattg 60  Q
    ||||| ||||||||||||||||||| |||||||||||| | ||||||| |||||    
T  40494933 caattatcgtgagaatcgtcgtcgtccgtttgatttcagacatcgtgaaaattg 40494986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 288
Target Start/End: Original strand, 28391326 - 28391372
Alignment:
Q  242 ctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    |||| |||||||||| ||||||  |||||||||||||||||||||||    
T  28391326 ctgatatggttatgtgatgaggcatttgttcttttgtttggacttaa 28391372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 98
Target Start/End: Original strand, 3906224 - 3906285
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||||||||||||||||||||||| ||||||| ||| || || | | ||||| ||||||||    
T  3906224 tgatttcaaatatcgtgagaattgccgttattttcagtacaacgttaggtatgatgacttga 3906285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 98
Target Start/End: Original strand, 37724825 - 37724886
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    |||||||||||||| |||||||||  ||||||| ||| || || ||||||||| ||||||||    
T  37724825 tgatttcaaatatcatgagaattgtcgttatttccagtacaacgtcaagtatgatgacttga 37724886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 98
Target Start/End: Original strand, 38281581 - 38281642
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||||||||||||||||||||||  ||||||| ||| || || ||| ||||| ||||||||    
T  38281581 tgatttcaaatatcgtgagaattgtcgttatttccagtacaacgtcaggtatgatgacttga 38281642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Original strand, 38281925 - 38281961
Alignment:
Q  303 cgcggttttagaaacaatgacaattctcacgataatt 339  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  38281925 cgcggttctagaaacaacgacaattctcacgataatt 38281961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 69
Target Start/End: Original strand, 39966479 - 39966511
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttattt 69  Q
    ||||||||||||||||||||||||| |||||||    
T  39966479 tgatttcaaatatcgtgagaattgccgttattt 39966511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Original strand, 39966823 - 39966859
Alignment:
Q  303 cgcggttttagaaacaatgacaattctcacgataatt 339  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  39966823 cgcggttctagaaacaacgacaattctcacgataatt 39966859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 132; Significance: 2e-68; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 8 - 339
Target Start/End: Original strand, 50495565 - 50495895
Alignment:
Q  8 aattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttgannnnnnnnn 107  Q
    |||||||||||||||||||||||||    ||||| |||||||||||||||||||  |||||| ||||||||| |||||||||| |||||||             
T  50495565 aattttcgtgagaatcgtcgtcgtt----tgattccaaatatcgtgagaattgccattatttccagaaccacgtcaagtatggggacttgatttttcttt 50495660  T
Q  108 nnnnnnnnnnnnnncttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatg 207  Q
                  ||| ||||||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||| ||||||||    
T  50495661 ttgatttgatttttcttcgttgtgaggtagttaattataacaattgagtaagtcatccgttgtactttaaggactgttagcaggtgttgccgctgtgatg 50495760  T
Q  208 ttgtgggagtttgctagc-nnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggactt-aaggcttt-gctgagagcg 304  Q
    ||||||||||||||||||        ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| ||||| || |    
T  50495761 ttgtgggagtttgctagctttttttccggttactgctgaaatggttatgtcatgaggcttttgttcttttgtttggacttaaaggctttggctgatagtg 50495860  T
Q  305 cggttttagaaacaatgacaattctcacgataatt 339  Q
    || || ||||||||| |||||||||||| ||||||    
T  50495861 cgattctagaaacaacgacaattctcactataatt 50495895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 10 - 288
Target Start/End: Complemental strand, 46718453 - 46718175
Alignment:
Q  10 ttttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttgannnnnnnnnnn 109  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||| ||| ||||| ||| ||||||||||||||               
T  46718453 ttttcgtgagaatcgtcatcgttcgtttgatttcaaatatcgtgagaattgtcgttatttccagtaccacgtcaggtatggtgacttgatttttcttttt 46718354  T
Q  110 nnnnnnnnnnnncttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgtt 209  Q
                ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  ||| |||||||||||| |  |||||||||    
T  46718353 gatttgatttttcttggttgtgaggtagttaattataacaattgagtaagtcatccgttgtactttgagggctgatagcaggtgttgtcgttgtgatgtt 46718254  T
Q  210 gtgggagtttgctagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||||||||||||||        |||| |||||||||||||||||| |||||| |||||||||||| |||||||||||    
T  46718253 gtgggagtttgctagcatttttttggttgctgctgaaatggttatgtgatgaggcttttgttcttttatttggacttaa 46718175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 122 - 288
Target Start/End: Complemental strand, 34073653 - 34073487
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||  ||||||||||||||||||||||    
T  34073653 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgaggactgctagcaggtgttgctgctgtgatgttgtgggagtttgc 34073554  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||         ||| |||||||||||||||||| |||| | ||||||||||||||||||||||||    
T  34073553 tagcattttttttgttgctgctgaaatggttatgtgatgaagcttttgttcttttgtttggacttaa 34073487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 8 - 288
Target Start/End: Complemental strand, 49874482 - 49874203
Alignment:
Q  8 aattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttgannnnnnnnn 107  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||| ||| ||||| ||| |||||||||||| |             
T  49874482 aattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcatgagaattgtcgttatttccagtaccacgtcaggtatggtgactttatttttcttt 49874383  T
Q  108 nnnnnnnnnnnnnncttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatg 207  Q
                  |||||||||||| |||||||||||| ||||||||||||||||| |||||| |||||| |||| |||||| || |||| ||||||||    
T  49874382 ttgatttgatttttcttggttgtgag-tagttaattatatcaattgagtaagtcatcagttgtattttgaggactgctagcagatgctgccgctgtgatg 49874284  T
Q  208 ttgtgggagtttgctagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||||||||||||||||        |||| |||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  49874283 ttgtgggagtttgctagcatttttttggttgctgctgaaatggttatgtgatgaggcttttgttcttttgtttggacttaa 49874203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 122 - 288
Target Start/End: Complemental strand, 16665292 - 16665126
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||  ||| |||||||||||||| ||||||||||||||||||||||    
T  16665292 cttggttgtgaggtagttaattataacaattgagtaaatcatccgttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtgggagtttgc 16665193  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||        |||| |||||||||||||||||| |||||| |||||||||||| |||||||||||    
T  16665192 tagcatttttttggttgctgctgaaatggttatgtgatgaggcttttgttcttttatttggacttaa 16665126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 122 - 288
Target Start/End: Original strand, 23418718 - 23418884
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||    
T  23418718 cttggttgtgaggtagttaattataacaattgagtaaatcatccgttgtactttgaggactgctagcaggtgttgccgctgtgatgttgtgggagtttgc 23418817  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||        |||| ||| |||||||||||||| |||||| |||||||||||| |||||||||||    
T  23418818 tagcatttttttggttgctgttgaaatggttatgtgatgaggcttttgttcttttatttggacttaa 23418884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 122 - 288
Target Start/End: Complemental strand, 52448021 - 52447855
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||  ||| |||||||||||||| ||||||||||||||||||||||    
T  52448021 cttggttgtgaggtagttaattataacaattgagtaaatcatccgttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtgggagtttgc 52447922  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||        |||| |||||||||||||||||| |||||| |||||||||||| |||||||||||    
T  52447921 tagcatttttttggttgctgctgaaatggttatgtgatgaggcttttgttcttttatttggacttaa 52447855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 122 - 288
Target Start/End: Original strand, 23932971 - 23933137
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||| | |||||||||||| ||||||| |||||||||| |||    
T  23932971 cttggttgtgaggtagttaattataacaattgagtaagtcatgtgttgtactttgagggctgctggcaggtgttgccgctgtgattttgtgggagtctgc 23933070  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||       ||||| |||||||||| ||||||| |||||| ||||||||||||||||||||||||    
T  23933071 tagcattttttcggttgctgctgaaattgttatgtgatgaggcttttgttcttttgtttggacttaa 23933137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 122 - 288
Target Start/End: Original strand, 30826918 - 30827084
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||  ||| |||||||||||||| ||||||||||||| ||||||||    
T  30826918 cttggttgtgaggtagttaattataacaattgagtaaatcatccgttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtgtgagtttgc 30827017  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||        |||| | |||||||||||||||| |||||| |||||||||||| |||||||||||    
T  30827018 tagcatttttttggttgcagctgaaatggttatgtgatgaggcttttgttcttttatttggacttaa 30827084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 122 - 288
Target Start/End: Original strand, 41040960 - 41041126
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||  ||| |||||||||||||| ||||||||||||||||||||||    
T  41040960 cttggttgtgaggtagttaattataacaattgagtaaatcatccgttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtgggagtttgc 41041059  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    || |        |||| |||||||||||||||||| |||||  |||||||||||| |||||||||||    
T  41041060 taccatttttttggttgctgctgaaatggttatgtgatgagacttttgttcttttatttggacttaa 41041126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 123 - 288
Target Start/End: Original strand, 3035230 - 3035394
Alignment:
Q  123 ttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgct 222  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||  ||  |||||||||||||| |||||||||||||||||||||||    
T  3035230 ttggttgtgaggtagttaattataacaattgagtaaatcatccgttgtactttgagggctactagcaggtgttgccgctgtgatgttgtgggagtttgct 3035329  T
Q  223 agcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    |||        |||| |||||||||||||||||| |||||| |||||||||||| |||||||||||    
T  3035330 agcatttttt-ggttgctgctgaaatggttatgtgatgaggcttttgttcttttatttggacttaa 3035394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 7 - 288
Target Start/End: Original strand, 13533868 - 13534151
Alignment:
Q  7 caattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttgannnnnnnn 106  Q
    ||||||||||||||||||||||||||||||||| | |||||||| ||| |||||  ||||||| ||| ||||| ||| ||||||||||||||            
T  13533868 caattttcgtgagaatcgtcgtcgttcgtttgagtccaaatatcttgaaaattgtcgttatttccagtaccacgtcaggtatggtgacttgatttttctt 13533967  T
Q  107 nnnnnnnnnnnnnnncttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgat 206  Q
                   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||  ||||||||||| || ||||| |    
T  13533968 tttgatttgatttttcttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagggcttctagcaggtgttaccgctgtgtt 13534067  T
Q  207 gttgtgggagtttgctagcnnnnnnncggttactgctgaaatggt--tatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||||||||| |||||||        |||| |||||||||||||  ||||| |||||| |||||||| |||||||||||||||    
T  13534068 gttgtgggagtctgctagcatatttttggttgctgctgaaatggttatatgtgatgaggcttttgttcgtttgtttggacttaa 13534151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 122 - 288
Target Start/End: Complemental strand, 17361734 - 17361568
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||  ||  |||||||||||||| ||||||||||||||||||||||    
T  17361734 cttggttgtgaggtagttaattataacaattgagtaaatcatccgttgtactttgagggcttctagcaggtgttgccgctgtgatgttgtgggagtttgc 17361635  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||         ||| |||||||||||||||| | |||||| |||||||||||| |||||||||||    
T  17361634 tagcatttttttagttgctgctgaaatggttatatgatgaggcttttgttcttttatttggacttaa 17361568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 122 - 288
Target Start/End: Complemental strand, 4653604 - 4653438
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||  ||| ||||| ||||| || ||||||||||||||||||||||    
T  4653604 cttggttgtgaggtagttaattataacaattgagtaaatcatccgttgtactttaagggctgctagcatgtgtttccgctgtgatgttgtgggagtttgc 4653505  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    || |        |||| |||||||||||||||||| |||||| |||||||||||| |||||||||||    
T  4653504 tatcatttttttggttgctgctgaaatggttatgtgatgaggcttttgttcttttatttggacttaa 4653438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 122 - 288
Target Start/End: Original strand, 31292108 - 31292274
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||   || ||| ||||||||||  |||||||||||||||||||||    
T  31292108 cttggttgtgaggtagttaattataacaattgagtaagtcatccgttgtactttgagggttgctagtaggtgttgccgttgtgatgttgtgggagtttgc 31292207  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    | |         ||||||| ||||||||||||||| |||||| ||||||||||||||||||| ||||    
T  31292208 tggaatttttttggttactactgaaatggttatgtgatgaggcttttgttcttttgtttggatttaa 31292274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 122 - 288
Target Start/End: Complemental strand, 54920031 - 54919866
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||  ||| |||||||||||||| |||||||||||||| |||||||    
T  54920031 cttggttgtgatgtagttaattataacaattgagtaaatcatccgttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtggaagtttgc 54919932  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||        ||||  ||||||||||||||||| |||||| |||||||||||| |||||||||||    
T  54919931 tagcatttttt-ggttgttgctgaaatggttatgtgatgaggcttttgttcttttatttggacttaa 54919866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 126 - 288
Target Start/End: Original strand, 20353484 - 20353646
Alignment:
Q  126 gttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgctagc 225  Q
    |||||||||||||||||||||| |||||||||| ||||| |||||||||||||  ||| ||||||||||||   ||||||||||||||||||||||||||    
T  20353484 gttgtgaggtagttaattataaaaattgagtaaatcatccgttgtactttgagggctgctagcaggtgttgttgctgtgatgttgtgggagtttgctagc 20353583  T
Q  226 nnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
            ||||  ||||||||||||||||| |||||| |||||||||||| |||||||||||    
T  20353584 atttttttggttgttgctgaaatggttatgtgatgaggcttttgttcttttatttggacttaa 20353646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 122 - 288
Target Start/End: Complemental strand, 7487903 - 7487735
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttg--tactttgagaactgttagcaggtgttgccactgtgatgttgtgggagttt 219  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||  |||||||||  ||| ||||||||||||||  |||||||||||| ||||||    
T  7487903 cttgattgtgaggtagttaattataacaattgagtaaatcatctgttgtatactttgagggctgctagcaggtgttgccgttgtgatgttgtgagagttt 7487804  T
Q  220 gctagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||||        |||| |||||||||||||||||| |||||  |||||||||||| |||||||||||    
T  7487803 gctagcatttttttggttgctgctgaaatggttatgtgatgagacttttgttcttttatttggacttaa 7487735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 126 - 288
Target Start/End: Original strand, 20342759 - 20342921
Alignment:
Q  126 gttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgctagc 225  Q
    |||||||||||||||||||||| |||||||||| ||||| |||||||||||||  ||| ||||||||||||    |||||||||||||||||||||||||    
T  20342759 gttgtgaggtagttaattataaaaattgagtaaatcatccgttgtactttgagggctgctagcaggtgttgaagatgtgatgttgtgggagtttgctagc 20342858  T
Q  226 nnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
            ||||  ||||||||||||||||| |||||| |||||||||||| |||||||||||    
T  20342859 atttttttggttgttgctgaaatggttatgtgatgaggcttttgttcttttatttggacttaa 20342921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 122 - 276
Target Start/End: Original strand, 20786509 - 20786663
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    |||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||  ||| |||||||||||||| ||||||| ||||||||||||||    
T  20786509 cttggttgtgaggtagttaattataaaaattgagtaaatcatccgttgtactttgagggctgctagcaggtgttgccgctgtgatattgtgggagtttgc 20786608  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttctttt 276  Q
    ||||        || |  ||||||||||||||||| |||||| ||||||||||||    
T  20786609 tagcatttttttggctggtgctgaaatggttatgtgatgaggcttttgttctttt 20786663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 122 - 217
Target Start/End: Complemental strand, 35045613 - 35045518
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagt 217  Q
    ||||||||||| |||||| ||||||||||||||||||||||| | ||||||||||||| |||||||||||||||||  ||||||||||||||||||    
T  35045613 cttggttgtgatgtagtttattataacaattgagtaagtcatattttgtactttgagagctgttagcaggtgttgctgctgtgatgttgtgggagt 35045518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 7 - 225
Target Start/End: Complemental strand, 35825283 - 35825064
Alignment:
Q  7 caattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttgannnnnnnn 106  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| ||||||   ||||||| ||| ||||| |||  |||||||||||||            
T  35825283 caattttcgtgagaatcgtcgtcgttcgtttgattccaaatatcgtaagaattatcgttatttccagtaccacgtcagatatggtgacttgatttttctt 35825184  T
Q  107 nnnnnnnnnnnnnnncttggttgtgaggtagttaattataacaattgagtaagtcatc-tgttgtactttgagaactgttagcaggtgttgccactgtga 205  Q
                   ||||||||||| ||||||||||||||||||||||||||||||  |  |||||||||||  ||| |||||||||||||| ||||||    
T  35825183 tttgatttgatttttcttggttgtgaagtagttaattataacaattgagtaagtcattataatgtactttgagtgctgctagcaggtgttgccgctgtga 35825084  T
Q  206 tgttgtgggagtttgctagc 225  Q
    |||||||||||| |||||||    
T  35825083 tgttgtgggagtctgctagc 35825064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 31291994 - 31292085
Alignment:
Q  7 caattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    |||||||| |||||||||||||||||||||||||| |||||||||| |||||||  ||||||| ||| ||||| ||||||||||||||||||    
T  31291994 caattttcatgagaatcgtcgtcgttcgtttgattccaaatatcgtaagaattgtcgttatttccagtaccacgtcaagtatggtgacttga 31292085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 27958788 - 27958879
Alignment:
Q  7 caattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| |||||| | |||||||  || ||||| ||| ||||||||||||||    
T  27958788 caatttttgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtcagaattaccgttatttctagtaccacgtcaggtatggtgacttga 27958879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 34073749 - 34073659
Alignment:
Q  8 aattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||||||  ||||||| ||| ||||| |||||||| |||| ||||    
T  34073749 aattttcgtgagaatcgtcgtcgtttgtttgattccaaatatcgtgagaattgtcgttatttccagtaccacgtcaagtatagtgatttga 34073659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 156 - 288
Target Start/End: Original strand, 27961892 - 27962024
Alignment:
Q  156 taagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgctagcnnnnnnncggttactgctgaaatggttatg 255  Q
    ||||||||| |||||||||||||  ||| || |||||||||||  ||| |||||||||||||||||||||        |||| || ||||||||||||||    
T  27961892 taagtcatccgttgtactttgagggctgctaccaggtgttgccgttgtcatgttgtgggagtttgctagcatttttttggttgctactgaaatggttatg 27961991  T
Q  256 tcatgaggtttttgttcttttgtttggacttaa 288  Q
    |  ||||| ||||||||||||||||||| ||||    
T  27961992 tgctgaggcttttgttcttttgtttggatttaa 27962024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 23932858 - 23932947
Alignment:
Q  8 aattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||||||||||||| ||||| |||| ||||||| |||||||||||||||||   ||||||| ||| ||||| ||| ||||||||||||||    
T  23932858 aattttcgtgagaat-gtcgttgttcatttgattccaaatatcgtgagaattctcgttatttccagtaccacgtcaggtatggtgacttga 23932947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 35045707 - 35045646
Alignment:
Q  8 aattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttattt 69  Q
    ||||||| |||||||| ||||||||||||||||| ||||||||||||||||||  |||||||    
T  35045707 aattttcatgagaatcttcgtcgttcgtttgattccaaatatcgtgagaattgtcgttattt 35045646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 122 - 160
Target Start/End: Original strand, 27958903 - 27958941
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagt 160  Q
    |||||||||||||||||||||||||||||||||||||||    
T  27958903 cttggttgtgaggtagttaattataacaattgagtaagt 27958941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 288
Target Start/End: Original strand, 55450648 - 55450702
Alignment:
Q  234 ggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    |||| |||||||||||||||||| |||||| || ||||||||||||||| |||||    
T  55450648 ggttgctgctgaaatggttatgtgatgaggcttctgttcttttgtttggtcttaa 55450702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 98
Target Start/End: Complemental strand, 16665377 - 16665316
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||||||||||||||||||||||| ||||||| ||| || || ||| ||||| ||||||||    
T  16665377 tgatttcaaatatcgtgagaattgccgttatttccagtacaacgtcaggtatgatgacttga 16665316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 98
Target Start/End: Original strand, 23418633 - 23418694
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||||||||||||||||||||||||||||||| ||| || || | | ||||| ||||||||    
T  23418633 tgatttcaaatatcgtgagaattgctgttattttcagtacaacgttaggtatgatgacttga 23418694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 98
Target Start/End: Complemental strand, 52448106 - 52448045
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||||||||||||||||||||||| ||||||| ||| || || ||| ||||| ||||||||    
T  52448106 tgatttcaaatatcgtgagaattgccgttatttccagtacaacgtcaggtatgatgacttga 52448045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 303 - 339
Target Start/End: Original strand, 20786709 - 20786745
Alignment:
Q  303 cgcggttttagaaacaatgacaattctcacgataatt 339  Q
    ||||||| |||||||||||||||||||||||||||||    
T  20786709 cgcggttctagaaacaatgacaattctcacgataatt 20786745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 98
Target Start/End: Original strand, 20786424 - 20786485
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||||||||||||||||||||||| ||||||| ||| || || ||| ||||| ||| ||||    
T  20786424 tgatttcaaatatcgtgagaattgccgttatttccagtacaacgtcaggtatgatgatttga 20786485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 98
Target Start/End: Original strand, 30826833 - 30826894
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||||||||||||||||||||||  ||||||| ||| || || ||| ||||| ||||||||    
T  30826833 tgatttcaaatatcgtgagaattgtcgttattttcagtacaacgtcaggtatgatgacttga 30826894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 98
Target Start/End: Original strand, 41040875 - 41040936
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||||||||||||||||||||||  ||||||| ||| || || ||| ||||| ||||||||    
T  41040875 tgatttcaaatatcgtgagaattgtcgttattttcagtacaacgtcaggtatgatgacttga 41040936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 98
Target Start/End: Complemental strand, 54920116 - 54920055
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    |||||||||||||||||||||||| |||||||| ||| || || |||  |||| ||||||||    
T  54920116 tgatttcaaatatcgtgagaattgttgttatttccagtacaacgtcagatatgatgacttga 54920055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Original strand, 3035488 - 3035524
Alignment:
Q  303 cgcggttttagaaacaatgacaattctcacgataatt 339  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  3035488 cgcggttctagaaacaacgacaattctcacgataatt 3035524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 69
Target Start/End: Complemental strand, 4653689 - 4653657
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttattt 69  Q
    ||||||||||||||||||||||||| |||||||    
T  4653689 tgatttcaaatatcgtgagaattgccgttattt 4653657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 69
Target Start/End: Complemental strand, 7487983 - 7487951
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttattt 69  Q
    ||||||||||||||||||||||||| |||||||    
T  7487983 tgatttcaaatatcgtgagaattgccgttattt 7487951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Complemental strand, 16665033 - 16664997
Alignment:
Q  303 cgcggttttagaaacaatgacaattctcacgataatt 339  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  16665033 cgcggttctagaaacaacgacaattctcacgataatt 16664997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Original strand, 49969898 - 49969934
Alignment:
Q  303 cgcggttttagaaacaatgacaattctcacgataatt 339  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  49969898 cgcggttctagaaacaacgacaattctcacgataatt 49969934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Complemental strand, 52447762 - 52447726
Alignment:
Q  303 cgcggttttagaaacaatgacaattctcacgataatt 339  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  52447762 cgcggttctagaaacaacgacaattctcacgataatt 52447726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Complemental strand, 54919771 - 54919735
Alignment:
Q  303 cgcggttttagaaacaatgacaattctcacgataatt 339  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  54919771 cgcggttctagaaacaacgacaattctcacgataatt 54919735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 131; Significance: 7e-68; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 122 - 340
Target Start/End: Complemental strand, 56867 - 56648
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||    
T  56867 cttggttgtgaggtagttaattataacaattgagtgagtcatccgttgtactttgaagactgttagcaggtgttgccgctgtgatgttgtgggagtttgc 56768  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggactt-aaggctttgctgagagcgcggttttagaaacaat 320  Q
    |||        |||||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| ||  ||| | |||||||||     
T  56767 tagttttttttcggttagtgctgaaatggttatgtcatgaggcttttgttcttttgtttggacttaaaggctttgctgaaagtacggatctagaaacaac 56668  T
Q  321 gacaattctcacgataattc 340  Q
    |||||||||||| |||||||    
T  56667 gacaattctcactataattc 56648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 56987 - 56896
Alignment:
Q  7 caattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||||||||   ||||||| || |||||||||||||||||||||||||    
T  56987 caattttcatgagaatcgtcgtcgttcgtttgattccaaatatcgtgagaattttcgttatttccataaccacatcaagtatggtgacttga 56896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 116; Significance: 6e-59; HSPs: 82)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 7 - 288
Target Start/End: Complemental strand, 38697608 - 38697327
Alignment:
Q  7 caattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttgannnnnnnn 106  Q
    ||||||||||||||||| | ||||||||||||||| | ||||||||||||||||  ||||||| ||| ||||  ||| ||||||||||||||            
T  38697608 caattttcgtgagaatcattgtcgttcgtttgattccgaatatcgtgagaattgtcgttatttccagtaccatgtcaggtatggtgacttgatttttctt 38697509  T
Q  107 nnnnnnnnnnnnnnncttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgat 206  Q
                   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||| |||||||    
T  38697508 tttgatttgatttttcttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagggctgctagcaggtgttgccgctgtgat 38697409  T
Q  207 gttgtgggagtttgctagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||||||||| |||||||        |||| |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  38697408 gttgtgggagtctgctagcatttttttggttgctgctgaaatggttatgtgatgaggtttttgttcttttgtttggacttaa 38697327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 8 - 288
Target Start/End: Original strand, 3891968 - 3892249
Alignment:
Q  8 aattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttgannnnnnnnn 107  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||| |||||   ||||||| ||| ||||| ||||||||||||| ||||             
T  3891968 aattttcgtgagaatcgtcgtcgtttgtttgattccaaatatcgtgtgaattttcgttatttccagtaccacgtcaagtatggtgatttgatttttcttt 3892067  T
Q  108 nnnnnnnnnnnnnncttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatg 207  Q
                  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||    
T  3892068 ttgatttgatttttctttgttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgaggactgctagcaggtgttgccgctgtgatg 3892167  T
Q  208 ttgtgggagtttgctagc-nnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||||||||||||||||        ||||| |||||||||| ||||||| |||||| ||||||||||||||||||||||||    
T  3892168 ttgtgggagtttgctagcatttttttcggttgctgctgaaattgttatgtgatgaggcttttgttcttttgtttggacttaa 3892249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 12 - 288
Target Start/End: Complemental strand, 55411963 - 55411684
Alignment:
Q  12 ttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttgannnnnnnnnnnnn 111  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||| ||||||||| ||| ||| ||||||||||                 
T  55411963 ttcgtgagaatcgtcatcgttcgtttgatttcaaatatcgtgagaattgtcgttatttccagaaccacgtcaggtacggtgacttgatttttctttttga 55411864  T
Q  112 nnnnnnnnnncttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgt 211  Q
              |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||| ||||    
T  55411863 tttgttttttcttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgctaccaggtgttgccgctgtgatattgt 55411764  T
Q  212 gggagtttgctagc---nnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    |||||||| |||||          || || ||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  55411763 gggagtttactagcttttttttttcgattgctgctgaaatggttatgtcatgagacttttgttcttttgtttggacttaa 55411684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 122 - 288
Target Start/End: Original strand, 10827123 - 10827290
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||| ||||||||||||| ||||||||    
T  10827123 cttggttgtgaggtagttaattataacaattgagtaagtcatccgttgtactttgaggactgctagcaggtgttgccgctgtgatgttgtgagagtttgc 10827222  T
Q  222 tag-cnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    |||         ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  10827223 tagtatttttttcggttgctgctgaaatggttatgtcatgaggcttttgttcttttgtttggacttaa 10827290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 122 - 288
Target Start/End: Original strand, 4232476 - 4232642
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||  ||| |||||||||||||| ||||||||||||||||||||||    
T  4232476 cttggttgtgaggtagttaattataacaattcagtaagtcatccgttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtgggagtttgc 4232575  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||        |||| |||||||||||||||||| |||||| |||||||||||| |||||||||||    
T  4232576 tagcatttttttggttgctgctgaaatggttatgtgatgaggcttttgttcttttatttggacttaa 4232642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 122 - 288
Target Start/End: Original strand, 8851185 - 8851351
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||  ||| |||||||||||||| ||||||||||||||||||||||    
T  8851185 cttggttgtgaggtagttaattataacaattgagtaaatcatccgttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtgggagtttgc 8851284  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||        |||| |||||||||||||||||| |||||| |||||||||||| |||||||||||    
T  8851285 tagcatttttttggttgctgctgaaatggttatgtgatgaggcttttgttcttttatttggacttaa 8851351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 122 - 288
Target Start/End: Complemental strand, 11122251 - 11122085
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||  ||| |||||||||||||| ||||||||||||||||||||||    
T  11122251 cttggttgtgaggtagttaattataacaattgagtaaatcatcagttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtgggagtttgc 11122152  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||        |||| |||||||||||||||||| |||||| |||||||||||| |||||||||||    
T  11122151 tagcatttttttggttgctgctgaaatggttatgtgatgaggcttttgttcttttatttggacttaa 11122085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 8 - 288
Target Start/End: Complemental strand, 43339112 - 43338832
Alignment:
Q  8 aattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttgannnnnnnnn 107  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||  ||| ||||| ||| ||||||||||||||             
T  43339112 aattttcgtgagaatcgtcgtcgttcgtttgattccaaatatcgtgagaattgtcgttattatcagtaccacgtcaggtatggtgacttgatttttcttt 43339013  T
Q  108 nnnnnnnnnnnnnncttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatg 207  Q
                  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||   || ||| |||||||||| ||||||||    
T  43339012 ttgatttgatttttcttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagggttgctagtaggtgttgccgctgtgatg 43338913  T
Q  208 ttgtgggagtttgctagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    |||||||||| | ||| |        | ||  ||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  43338912 ttgtgggagtctactaacatttttttgattgatgctgaaatggttatgtgatgaggcttttgttcttttgtttggacttaa 43338832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 122 - 286
Target Start/End: Original strand, 53777760 - 53777926
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||||| |||||||||||||||||||| |    
T  53777760 cttggttgtgaagtagttaattataacaattgagtaagtcatctgttgtactttgaggactgctagcaagtgttgccgctgtgatgttgtgggagtttac 53777859  T
Q  222 tag--cnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggactt 286  Q
    |||  |       | ||| ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  53777860 tagctctttttttcagttgctgctgaaatggttatgtcatgaggcttttgttcttttgtttggactt 53777926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 126 - 288
Target Start/End: Complemental strand, 18410862 - 18410700
Alignment:
Q  126 gttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgctagc 225  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||  ||| |||||||||||||| ||| ||||||||||||||||||||||    
T  18410862 gttgtgaggtagttaattataacaattgagtaaatcatctgttgtactttgagggctgctagcaggtgttgccgctgcgatgttgtgggagtttgctagc 18410763  T
Q  226 nnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
            |||| |||||||||||||||||| |||||| |||||||||||| |||||||||||    
T  18410762 atttttttggttgctgctgaaatggttatgtgatgaggcttttgttcttttatttggacttaa 18410700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 122 - 288
Target Start/End: Complemental strand, 23020436 - 23020270
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||  ||| |||||||||||||| ||||||||||||||||||||||    
T  23020436 cttggttgtgaggtagttaattataacaattgagtaaatcatccgttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtgggagtttgc 23020337  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||        |||| |||||||||| ||||||| |||||| |||||||||||| |||||||||||    
T  23020336 tagcatttttttggttgctgctgaaattgttatgtgatgaggcttttgttcttttatttggacttaa 23020270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 122 - 288
Target Start/End: Complemental strand, 45170645 - 45170479
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||  ||| ||||||||||||||  |||||||||||||||||||||    
T  45170645 cttggttgtgaggtagttaattataacaattgagtaaatcatccgttgtactttgagggctgctagcaggtgttgccgttgtgatgttgtgggagtttgc 45170546  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||        |||| |||||||||||||||||| |||||| |||||||||||| |||||||||||    
T  45170545 tagcatttttttggttgctgctgaaatggttatgtgatgaggcttttgttcttttatttggacttaa 45170479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 122 - 288
Target Start/End: Original strand, 50547881 - 50548047
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||  ||| |||||||||||||| ||||||||||||||| ||||||    
T  50547881 cttggttgtgaggtagttaattataacaattgagtaaatcatccgttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtgggcgtttgc 50547980  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||        |||| |||||||||||||||||| |||||| |||||||||||| |||||||||||    
T  50547981 tagcatttttttggttgctgctgaaatggttatgtgatgaggcttttgttcttttatttggacttaa 50548047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 7 - 288
Target Start/End: Original strand, 22428215 - 22428500
Alignment:
Q  7 caattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttgannnnnnnn 106  Q
    |||||||| ||||||| |||||||||||||||||| |||||||||||||||||   |||||||  |||||||  ||| ||||||||||||||            
T  22428215 caattttcctgagaattgtcgtcgttcgtttgattccaaatatcgtgagaattatcgttatttcgagaaccatgtcaggtatggtgacttgatttttgtt 22428314  T
Q  107 nnnnnnnnnnnnnnncttggttgtgaggtagttaattataacaattgagtaagtcatc---tgttgtactttgagaactgttagcaggtgttgccactgt 203  Q
                   |||||||||||||||||||||||||||| |||| |||||| ||   |||||||||||||| |||| |||||||||||||| ||||    
T  22428315 tttgatttgatttttcttggttgtgaggtagttaattataacatttgaataagtcgtcatttgttgtactttgaggactgctagcaggtgttgccgctgt 22428414  T
Q  204 gatgttgtgggagtttgctagc-nnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||||||||||||||||||||        ||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  22428415 gatgttgtgggagtttgctagcatttttttcggttgctgctgaattggttatgtcatgaggcttttgttcttttgtttggacttaa 22428500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 122 - 288
Target Start/End: Original strand, 45053117 - 45053283
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||  ||| |||||||||||| | ||||||||||||||||||||||    
T  45053117 cttggttgtgaggtagttaattataacaattgagtaaatcatccgttgtactttgagggctgctagcaggtgttgtcgctgtgatgttgtgggagtttgc 45053216  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||        ||||  ||||||||||||||||| |||||| |||||||||||| |||||||||||    
T  45053217 tagcatttttttggttgttgctgaaatggttatgtgatgaggcttttgttcttttatttggacttaa 45053283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 122 - 287
Target Start/End: Original strand, 44842594 - 44842759
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||  ||| |||||||||||||| ||||||||||||||||||||||    
T  44842594 cttggttgtgaggtagttaattataacaattgagtaaatcatccgttatactttgagggctgctagcaggtgttgccgctgtgatgttgtgggagtttgc 44842693  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggactta 287  Q
    ||||        |||| |||||||||||||||||| |||||| |||||||||||| |||| |||||    
T  44842694 tagcatttttttggttgctgctgaaatggttatgtgatgaggcttttgttcttttatttgaactta 44842759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 122 - 288
Target Start/End: Complemental strand, 42826631 - 42826465
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||| | |||||||||||| ||||||||||||||||||||||    
T  42826631 cttggttgtgaggtagttaattataacaattgagtaagtcatccgttgtacttcgaggactgcttgcaggtgttgccgctgtgatgttgtgggagtttgc 42826532  T
Q  222 tagc-nnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||        |||||  ||||||||| ||||||| |||||| ||||||||||||||||||||||||    
T  42826531 tagcatttttttcggttgttgctgaaat-gttatgtaatgaggcttttgttcttttgtttggacttaa 42826465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 122 - 288
Target Start/End: Original strand, 30439689 - 30439855
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||   || ||||||||||||||  |||||||||||||||||||||    
T  30439689 cttggttgtgaggtagttaattataacaattgagtaaatcatccgttgtactttgaggcttgctagcaggtgttgccgatgtgatgttgtgggagtttgc 30439788  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||        ||||  ||||||||||||||||| |||||| |||||||||||| |||||||||||    
T  30439789 tagcatttttttggttgttgctgaaatggttatgtgatgaggcttttgttcttttatttggacttaa 30439855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 7 - 217
Target Start/End: Complemental strand, 38236274 - 38236064
Alignment:
Q  7 caattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttgannnnnnnn 106  Q
    ||||||||||||||||||||||||||||||||||| |||||||| |||||||||   |||||| ||  ||||||||||||||||||||||||            
T  38236274 caattttcgtgagaatcgtcgtcgttcgtttgattccaaatatcttgagaattgtcattatttccaataccacatcaagtatggtgacttgatttttctt 38236175  T
Q  107 nnnnnnnnnnnnnnncttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgat 206  Q
                   ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||| |||||||    
T  38236174 tttgatttgatttttcttggttgtgatgtagttaattataacaattaagtaagtcatctgttgtactttgagggctgttagcaggtgttgccgctgtgat 38236075  T
Q  207 gttgtgggagt 217  Q
    |||||||||||    
T  38236074 gttgtgggagt 38236064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 122 - 288
Target Start/End: Complemental strand, 40424342 - 40424176
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||  ||| | |||||||||| | |||||||||||||||||| |||    
T  40424342 cttggttgtgaagtagttaattataacaattgagtaagtcatctgttgtaatttgagggctgatggcaggtgttgtcgctgtgatgttgtgggagtctgc 40424243  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||        |||| |||||||||||||||||| |||||| |||||||||||| |||||||||||    
T  40424242 tagcatttttttggttgctgctgaaatggttatgtgatgaggcttttgttcttttatttggacttaa 40424176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 122 - 288
Target Start/End: Complemental strand, 41102322 - 41102156
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||   || |||||||||||||| |||||||||||||||||||||     
T  41102322 cttggttgtgaggtagttaattataacaattgagtaaatcatctattgtactttcagggatgctagcaggtgttgccgctgtgatgttgtgggagtttga 41102223  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||        |||| |||||||||||||||||| |||||| |||||||||||| |||||||||||    
T  41102222 tagcatttttttggttgctgctgaaatggttatgtgatgaggcttttgttcttttatttggacttaa 41102156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 122 - 288
Target Start/End: Original strand, 47912340 - 47912506
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    |||||||||||| |||||| ||||||||||||||||| ||||| |||||||||||||  ||| ||||||||||| || ||||||||||||||||||||||    
T  47912340 cttggttgtgagatagttacttataacaattgagtaaatcatccgttgtactttgagggctgctagcaggtgttaccgctgtgatgttgtgggagtttgc 47912439  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||        |||| |||||||||||||||||| |||||| |||||||||||| |||||||||||    
T  47912440 tagcatttttttggttgctgctgaaatggttatgtgatgaggcttttgttcttttatttggacttaa 47912506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 122 - 288
Target Start/End: Complemental strand, 50610089 - 50609923
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||  ||| ||||| |||||||| ||||||||||||||||||||||    
T  50610089 cttggttgtgaggtagttaattataacaattgagtaaatcatccgttgtactttgagggctgctagcatgtgttgccgctgtgatgttgtgggagtttgc 50609990  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
     |||        |||| |||||||||| ||||||| |||||| |||||||||||| |||||||||||    
T  50609989 cagcatttttttggttgctgctgaaatagttatgtgatgaggcttttgttcttttatttggacttaa 50609923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 122 - 286
Target Start/End: Complemental strand, 22605520 - 22605356
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||   || ||||| |||||||| ||||||||||||||||||||||    
T  22605520 cttggttgtgaggtagttaattataacaattgagtaaatcatctgttgtactttgagggttgctagcatgtgttgccgctgtgatgttgtgggagtttgc 22605421  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggactt 286  Q
    ||||        || | |||||||||||||||||| |||||  |||||||||||| |||||||||    
T  22605420 tagcatttttttggctgctgctgaaatggttatgtgatgagacttttgttcttttatttggactt 22605356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 122 - 288
Target Start/End: Complemental strand, 2218640 - 2218474
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    |||| |||||||||||||||||||||||||||||||| ||||   ||||||||||||  ||| |||||||||||||| || |||||||||||||||||||    
T  2218640 cttgattgtgaggtagttaattataacaattgagtaaatcattcattgtactttgagggctgctagcaggtgttgccgctctgatgttgtgggagtttgc 2218541  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    || |        |||| |||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  2218540 taccattcttttggttgctgctgaaatggttatgtgatgaggtttttgttcttttatttggacttaa 2218474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 122 - 288
Target Start/End: Original strand, 30042889 - 30043055
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    |||||||||||||||||||||||||| |||||||||| ||||| ||||| |||||||  ||| |||||||||||||| ||||||||||||||||||||||    
T  30042889 cttggttgtgaggtagttaattataaaaattgagtaaatcatccgttgtgctttgagggctgctagcaggtgttgccgctgtgatgttgtgggagtttgc 30042988  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||        ||||  ||||||||||||||||| | |||| |||||||||||| |||||||||||    
T  30042989 tagcatttttttggttgttgctgaaatggttatgtgaagaggcttttgttcttttatttggacttaa 30043055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 122 - 288
Target Start/End: Complemental strand, 37786083 - 37785917
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||| |||||| ||  ||| |||||| ||||||| ||||||| ||||||||||||||    
T  37786083 cttggttgtgaggtagttaagtataacaattgagtaaatcatctgttatactttaagggctgctagcagatgttgccgctgtgatattgtgggagtttgc 37785984  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||        |||| |||||||||||||||||| |||||| |||||||||||| |||||||||||    
T  37785983 tagcatttttttggttgctgctgaaatggttatgtgatgaggcttttgttcttttatttggacttaa 37785917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 143 - 288
Target Start/End: Complemental strand, 13214090 - 13213945
Alignment:
Q  143 tataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgctagcnnnnnnncggttactgc 242  Q
    |||||||||||||||| ||||| |||||||||||||  ||| |||||||||||||| ||||||||||||||||||||||||||        |||| ||||    
T  13214090 tataacaattgagtaaatcatccgttgtactttgagggctgctagcaggtgttgcctctgtgatgttgtgggagtttgctagcatttttttggttgctgc 13213991  T
Q  243 tgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||    
T  13213990 tgaaatggttatgtaatgaggtttttgttcttttatttggacttaa 13213945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 122 - 281
Target Start/End: Complemental strand, 40906787 - 40906628
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    |||||||||||| |||||||||||||||||||||||| ||||| |||||||||||||  ||| ||||||||||||||  |||||||||||||||||||||    
T  40906787 cttggttgtgagatagttaattataacaattgagtaaatcatccgttgtactttgagggctgctagcaggtgttgccgttgtgatgttgtgggagtttgc 40906688  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttg 281  Q
    ||||        ||||  ||||||||||||||||| |||||| |||||||||||| ||||    
T  40906687 tagcatctttttggttgttgctgaaatggttatgtgatgaggcttttgttcttttatttg 40906628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 122 - 288
Target Start/End: Complemental strand, 16464568 - 16464402
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||  ||| ||||| |||||||| |||||||||||||||||||| |    
T  16464568 cttggttgtgaggtagttaattataacaattaagtaaatcatccgttgtactttgagggctgctagcatgtgttgccgctgtgatgttgtgggagtttcc 16464469  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    || |        |||| |||||||||||||||||| |||||  |||||||||||| |||||||||||    
T  16464468 taccatttttttggttgctgctgaaatggttatgtgatgagacttttgttcttttatttggacttaa 16464402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 122 - 288
Target Start/End: Original strand, 41697494 - 41697660
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||  ||| |||||||||||| |  |||||||||||||||||||||    
T  41697494 cttggttgtgaggtagttaattataacaattgagtaaatcattcgttgtactttgagggctgctagcaggtgttgtcgttgtgatgttgtgggagtttgc 41697593  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||         ||| |||||||||||||||||| |||||  |||||||||||| |||||||||||    
T  41697594 tagcatttttttagttgctgctgaaatggttatgtgatgagacttttgttcttttatttggacttaa 41697660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 122 - 288
Target Start/End: Original strand, 51722198 - 51722364
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||| | |||||||||||||||| |||    
T  51722198 cttggttgtgaagtagttaattataacaattgagtaagtcatctgttgtactttgagggctgctagcaggtgttgccgcggtgatgttgtgggagtctgc 51722297  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    |||         ||||  ||||||||||||||||| |||| | |||||||||||||| || ||||||    
T  51722298 tagtatttttttggttgttgctgaaatggttatgtgatgaagcttttgttcttttgtctgaacttaa 51722364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 123 - 285
Target Start/End: Original strand, 30363081 - 30363244
Alignment:
Q  123 ttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgct 222  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||  |||| |||||||  |||||||||||||||||||||||    
T  30363081 ttggttgtgaggtagttaattataacaactgagtaagtcatctgttgtactttgaggactgcgagcaagtgttgctgctgtgatgttgtgggagtttgct 30363180  T
Q  223 agc-nnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggact 285  Q
    |||         |||| |||||||| ||||||||| |||| | |||||||||||| ||||||||    
T  30363181 agcattttttttggttgctgctgaagtggttatgtgatgatgcttttgttcttttatttggact 30363244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 129 - 287
Target Start/End: Original strand, 6175057 - 6175215
Alignment:
Q  129 gtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgctagcnnn 228  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||||||  ||| ||||||||||||||  |||||||||||||||||||||||||       
T  6175057 gtgaggtagttaattataacaattgagtaaatcatccgttgtactttgagggctgctagcaggtgttgccgttgtgatgttgtgggagtttgctagcatt 6175156  T
Q  229 nnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggactta 287  Q
         ||||  ||||||||||||||||  | |||| |||||||||||| ||||||||||    
T  6175157 tttttggttgttgctgaaatggttatgctacgaggcttttgttcttttatttggactta 6175215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 122 - 225
Target Start/End: Original strand, 37219600 - 37219703
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||  ||| |||||||||||||| ||||||||||||||||||||||    
T  37219600 cttggttgtgaggtagttaattataacaattgagtaaatcatccgttgtaatttgagggctgctagcaggtgttgccgctgtgatgttgtgggagtttgc 37219699  T
Q  222 tagc 225  Q
    ||||    
T  37219700 tagc 37219703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 122 - 288
Target Start/End: Complemental strand, 16009438 - 16009272
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    |||||||||||||||||||||||||||||||||||||  ||||  ||||||||||||  ||| |||||||||||||| ||||||||||||||| ||||||    
T  16009438 cttggttgtgaggtagttaattataacaattgagtaaaacatccattgtactttgagggctgctagcaggtgttgccgctgtgatgttgtgggtgtttgc 16009339  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||          ||||  || |||||||||||||| |||||| |||||||||||| |||||||||||    
T  16009338 taatatttttttggttgttggtgaaatggttatgtgatgaggcttttgttcttttatttggacttaa 16009272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 122 - 288
Target Start/End: Original strand, 27325084 - 27325250
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||  ||| | |||| |||||||  |||||||||||||||||||||    
T  27325084 cttggttgtgaggtagttaattatatcaattgagtaaatcatttgttgtactttgagggctgctggcagttgttgccgttgtgatgttgtgggagtttgc 27325183  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||        | || ||||| ||||| |||||| |||||| |||||||||||| |||||||||||    
T  27325184 tagcatttttttgattgctgctaaaatgattatgtgatgaggcttttgttcttttatttggacttaa 27325250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 122 - 288
Target Start/End: Original strand, 27331321 - 27331487
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||  ||| | |||| |||||||  |||||||||||||||||||||    
T  27331321 cttggttgtgaggtagttaattatatcaattgagtaaatcatttgttgtactttgagggctgctggcagttgttgccgttgtgatgttgtgggagtttgc 27331420  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||        | || ||||| ||||| |||||| |||||| |||||||||||| |||||||||||    
T  27331421 tagcatttttttgattgctgctaaaatgattatgtgatgaggcttttgttcttttatttggacttaa 27331487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 122 - 225
Target Start/End: Complemental strand, 27126827 - 27126724
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||  ||| |||||| ||||||| ||||||||||||| ||||||||    
T  27126827 cttggttgtgaggtagttaattataacaattgagtaaatcatccgttgtactttgagggctgctagcagatgttgccgctgtgatgttgtgagagtttgc 27126728  T
Q  222 tagc 225  Q
    ||||    
T  27126727 tagc 27126724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 122 - 288
Target Start/End: Original strand, 31313020 - 31313190
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||   || |||||||||||||| |||||||||||||||||| | |    
T  31313020 cttggttgtaatgtagttaattataacaattgagtaagtcatctgttgtactttgagggttgctagcaggtgttgccgctgtgatgttgtgggagtctac 31313119  T
Q  222 ----tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
        ||||        || | ||||| ||||| |||||| |||||| ||||||||||||||||||||||||    
T  31313120 tatatagcatttttttggatgctgctaaaatgattatgtgatgaggcttttgttcttttgtttggacttaa 31313190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 42826743 - 42826652
Alignment:
Q  7 caattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||  ||| ||||||||||||||    
T  42826743 caattttcgtgagaatcgtcgtcgttcgtttgatttcaaatattgtgagaattgctgttatttccagtaccatgtcaggtatggtgacttga 42826652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 10827027 - 10827117
Alignment:
Q  8 aattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||| || |||||| ||||||||||||||||||    
T  10827027 aattttcgtgagaatcgtcgtcgttcgtttgattccaaatatcgtgagaattgtcgttatttccataaccacgtcaagtatggtgacttga 10827117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 8 - 176
Target Start/End: Original strand, 37181288 - 37181456
Alignment:
Q  8 aattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttgannnnnnnnn 107  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||||||  ||||||| ||| ||||| ||||||||||||| ||||             
T  37181288 aattttcgtgagaatcgtcgtcgtttgtttgattccaaatatcgtgagaattgtcgttatttccagtaccacgtcaagtatggtgatttgatttttcttt 37181387  T
Q  108 nnnnnnnnnnnnnncttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttg 176  Q
                  ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  37181388 ttgatttgatttttcttagttgtgaggtagttaattataacaattgagtgagtcatctgttgtactttg 37181456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 30362896 - 30362986
Alignment:
Q  8 aattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||||||  ||||||| ||| ||||| ||||||||||||| ||||    
T  30362896 aattttcgtgagaatcgtcgtcgtttgtttgattccaaatatcgtgagaattgtcgttatttccagtaccacgtcaagtatggtgatttga 30362986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 31312923 - 31313014
Alignment:
Q  7 caattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||  ||||||| ||| | ||| ||| ||||||||||||||    
T  31312923 caattttcgtgagaatcgtcgtcgtttgtttgattccaaatatcgtgagaattgtcgttatttccagtatcacgtcaggtatggtgacttga 31313014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 51722101 - 51722192
Alignment:
Q  7 caattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||  ||||||| ||| ||||| ||| ||||||||||||||    
T  51722101 caattttcgtgagaatcatcgtcgttcgtttgattccaaatgtcgtgagaattgtcgttatttccagtaccacgtcaggtatggtgacttga 51722192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 7 - 78
Target Start/End: Complemental strand, 18762688 - 18762617
Alignment:
Q  7 caattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaacca 78  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||    
T  18762688 caattttcgtcagaatcctcgtcgttcgtttgatttcaaatatcgtgagaattgccgttatttccagtacca 18762617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 98
Target Start/End: Original strand, 53777677 - 53777754
Alignment:
Q  21 atcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    |||||| ||||||||||||||| |||||||||||||||||| ||||||| || |||||| ||| ||||||||||||||    
T  53777677 atcgtcatcgttcgtttgattttaaatatcgtgagaattgccgttatttccataaccacgtcaggtatggtgacttga 53777754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 233 - 288
Target Start/End: Original strand, 37181480 - 37181535
Alignment:
Q  233 cggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  37181480 cggttgctgctgaaatggttatgtgatgaggcttttgttcttttgtttggacttaa 37181535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 288
Target Start/End: Complemental strand, 38236039 - 38235990
Alignment:
Q  239 ctgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    |||||||||||||||||| |||||  ||||||||||||||||||||||||    
T  38236039 ctgctgaaatggttatgtgatgagacttttgttcttttgtttggacttaa 38235990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 98
Target Start/End: Complemental strand, 41102407 - 41102346
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||||||||||||||||||||||| ||||||| ||| || |||||| ||||| ||||||||    
T  41102407 tgatttcaaatatcgtgagaattgccgttattttcagtacaacatcaggtatgatgacttga 41102346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 98
Target Start/End: Complemental strand, 40424433 - 40424366
Alignment:
Q  31 ttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||||||||| ||||||||||||||||||  ||||||| ||| ||||| | | ||||||||||||||    
T  40424433 ttcgtttgattccaaatatcgtgagaattgtcgttattttcagtaccacgttaggtatggtgacttga 40424366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 288
Target Start/End: Complemental strand, 27321545 - 27321499
Alignment:
Q  242 ctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||||||||||||| |||||| |||||||||||| |||||||||||    
T  27321545 ctgaaatggttatgtgatgaggattttgttcttttatttggacttaa 27321499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 165
Target Start/End: Original strand, 30363017 - 30363055
Alignment:
Q  127 ttgtgaggtagttaattataacaattgagtaagtcatct 165  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  30363017 ttgtgaggtagttaattataacaactgagtaagtcatct 30363055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 98
Target Start/End: Complemental strand, 2218725 - 2218664
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||||||||||||||||||||||| ||||||| ||| || || ||| ||||| ||||||||    
T  2218725 tgatttcaaatatcgtgagaattgccgttattttcagtacaacgtcaggtatgatgacttga 2218664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 98
Target Start/End: Complemental strand, 16464653 - 16464592
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||||||||||||||||||||||| ||||||| ||| || || ||| ||||| ||||||||    
T  16464653 tgatttcaaatatcgtgagaattgccgttattttcagtacaacgtcaggtatgatgacttga 16464592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 98
Target Start/End: Complemental strand, 22605605 - 22605544
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||||||||||||||||||||||| ||||||| ||| || || ||| ||||| ||||||||    
T  22605605 tgatttcaaatatcgtgagaattgcagttatttccagtacaacgtcaggtatgatgacttga 22605544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 98
Target Start/End: Complemental strand, 27126912 - 27126851
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||||||||||||||||||||||| ||||||| ||| || || ||| ||||| ||||||||    
T  27126912 tgatttcaaatatcgtgagaattgccgttatttccagtacaacgtcaggtatgatgacttga 27126851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 98
Target Start/End: Original strand, 27324999 - 27325060
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    |||||||||||||||||||||||| |||||||| ||| || || ||| ||||| ||||||||    
T  27324999 tgatttcaaatatcgtgagaattgttgttatttccagtacaacgtcaggtatgatgacttga 27325060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 98
Target Start/End: Original strand, 27331236 - 27331297
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    |||||||||||||||||||||||| |||||||| ||| || || ||| ||||| ||||||||    
T  27331236 tgatttcaaatatcgtgagaattgttgttatttccagtacaacgtcaggtatgatgacttga 27331297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 98
Target Start/End: Original strand, 30042804 - 30042865
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||||||||||||||||||||||| ||||||| ||| || || ||| ||||| ||||||||    
T  30042804 tgatttcaaatatcgtgagaattgccgttattttcagtacaacgtcaggtatgatgacttga 30042865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 98
Target Start/End: Original strand, 37219515 - 37219576
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||||||||||||||||||||||| ||||||| ||| || || ||| ||||| ||||||||    
T  37219515 tgatttcaaatatcgtgagaattgccgttatttccagtacaacgtcaggtatgatgacttga 37219576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 98
Target Start/End: Complemental strand, 37786168 - 37786107
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    |||||| |||||||||||||||||||||||||| ||| || || ||| ||||| ||||||||    
T  37786168 tgattttaaatatcgtgagaattgctgttatttccagtacaacgtcaggtatgatgacttga 37786107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 98
Target Start/End: Original strand, 41697409 - 41697470
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||||||||||||||||||||||| ||||||| ||| || || ||| ||||| ||||||||    
T  41697409 tgatttcaaatatcgtgagaattgccgttatttccagtacaacgtcaggtatgatgacttga 41697470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 303 - 339
Target Start/End: Original strand, 47912599 - 47912635
Alignment:
Q  303 cgcggttttagaaacaatgacaattctcacgataatt 339  Q
    ||||||||||||||||| |||||||||||||||||||    
T  47912599 cgcggttttagaaacaacgacaattctcacgataatt 47912635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 39 - 98
Target Start/End: Original strand, 4232393 - 4232452
Alignment:
Q  39 atttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    |||||||||||||||||||||| |||||||| ||| || || ||| ||||| ||||||||    
T  4232393 atttcaaatatcgtgagaattgttgttatttccagtacaacgtcaggtatgatgacttga 4232452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 42164986 - 42164895
Alignment:
Q  7 caattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||| ||||||||||||| ||||| | ||||||| |||| || |||||||| | |||| ||| || || ||||||| ||||| ||||||||    
T  42164986 caattatcgtgagaatcgttgtcgtccttttgattccaaacattgtgagaatcggtgttgtttccataatcacatcaggtatgatgacttga 42164895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 98
Target Start/End: Complemental strand, 18410951 - 18410890
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||||||||||||||||||||||  ||||||| ||| || || ||| ||||| ||||||||    
T  18410951 tgatttcaaatatcgtgagaattgtcgttatttccagtacaacgtcatgtatgatgacttga 18410890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 152
Target Start/End: Complemental strand, 18762571 - 18762542
Alignment:
Q  123 ttggttgtgaggtagttaattataacaatt 152  Q
    ||||||||||||||||||||||||||||||    
T  18762571 ttggttgtgaggtagttaattataacaatt 18762542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 98
Target Start/End: Complemental strand, 40906872 - 40906811
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||||||||||||||||||||||  ||||||| ||| || || ||| ||||| ||||||||    
T  40906872 tgatttcaaatatcgtgagaattgtcgttattttcagtacaacgtcaggtatgatgacttga 40906811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 42879432 - 42879383
Alignment:
Q  7 caattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgaga 56  Q
    ||||| ||||||||||||| ||||| |||||||||||| | |||||||||    
T  42879432 caattatcgtgagaatcgttgtcgtccgtttgatttcagacatcgtgaga 42879383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 98
Target Start/End: Original strand, 45053032 - 45053093
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    |||||||||||||||| |||||||| ||||||| ||| || || ||| ||||| ||||||||    
T  45053032 tgatttcaaatatcgttagaattgccgttatttccagtacaacgtcaggtatgatgacttga 45053093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 98
Target Start/End: Original strand, 50547796 - 50547857
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||||||||||||||||||||||  ||||||| ||| || | |||| ||||| ||||||||    
T  50547796 tgatttcaaatatcgtgagaattgtcgttatttccagtacaatatcaggtatgatgacttga 50547857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Complemental strand, 2218381 - 2218345
Alignment:
Q  303 cgcggttttagaaacaatgacaattctcacgataatt 339  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  2218381 cgcggttctagaaacaacgacaattctcacgataatt 2218345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Original strand, 8851444 - 8851480
Alignment:
Q  303 cgcggttttagaaacaatgacaattctcacgataatt 339  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  8851444 cgcggttctagaaacaacgacaattctcacgataatt 8851480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Complemental strand, 11121991 - 11121955
Alignment:
Q  303 cgcggttttagaaacaatgacaattctcacgataatt 339  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  11121991 cgcggttctagaaacaacgacaattctcacgataatt 11121955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Complemental strand, 18410606 - 18410570
Alignment:
Q  303 cgcggttttagaaacaatgacaattctcacgataatt 339  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  18410606 cgcggttctagaaacaacgacaattctcacgataatt 18410570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Complemental strand, 27321398 - 27321362
Alignment:
Q  303 cgcggttttagaaacaatgacaattctcacgataatt 339  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  27321398 cgcggttctagaaacaacgacaattctcacgataatt 27321362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Complemental strand, 41102061 - 41102025
Alignment:
Q  303 cgcggttttagaaacaatgacaattctcacgataatt 339  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  41102061 cgcggttctagaaacaacgacaattctcacgataatt 41102025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Original strand, 44842854 - 44842890
Alignment:
Q  303 cgcggttttagaaacaatgacaattctcacgataatt 339  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  44842854 cgcggttctagaaacaacgacaattctcacgataatt 44842890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Original strand, 45053376 - 45053412
Alignment:
Q  303 cgcggttttagaaacaatgacaattctcacgataatt 339  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  45053376 cgcggttctagaaacaacgacaattctcacgataatt 45053412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Complemental strand, 45170385 - 45170349
Alignment:
Q  303 cgcggttttagaaacaatgacaattctcacgataatt 339  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  45170385 cgcggttctagaaacaacgacaattctcacgataatt 45170349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 114; Significance: 9e-58; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 126 - 288
Target Start/End: Complemental strand, 47504245 - 47504083
Alignment:
Q  126 gttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgctagc 225  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||| |||||||||| ||||||||||||||||||||||||||    
T  47504245 gttgtgaggtagttaattataacaattgagtaagtcatctattgtactttgaggactgctaggaggtgttgccgctgtgatgttgtgggagtttgctagc 47504146  T
Q  226 nnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
           ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  47504145 attttttcggttgctgctgaaatggttatgtgatgaggtttttgttcttttgtttggacttaa 47504083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 123 - 288
Target Start/End: Original strand, 30759450 - 30759616
Alignment:
Q  123 ttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgct 222  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||| |||||||||||||||||||||||    
T  30759450 ttggttgtgaggtagttaattataacaattgagtaagtcatttgttgtactttgaggactgctagcaggtgttgccgctgtgatgttgtgggagtttgct 30759549  T
Q  223 agc-nnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    |||        ||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  30759550 agcatttttttcggttgctgctgaaatggttatgtgatgaggcttttgttcttttgtttggacttaa 30759616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 8 - 288
Target Start/End: Original strand, 48606871 - 48607151
Alignment:
Q  8 aattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttgannnnnnnnn 107  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||||||  ||||||| ||| ||||| ||| ||||||||||||||             
T  48606871 aattttcgtgagaatcgtcgtcgttagtttgattccaaatatcgtgagaattgtcgttatttccagtaccacgtcaggtatggtgacttgatttttcttt 48606970  T
Q  108 nnnnnnnnnnnnnncttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatg 207  Q
                  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||||||  |||||||    
T  48606971 ttgatttgatttttcttggttgtgaggtagttaattatgacaattgagtaagtcatctgttgtactttgagggctgctagcaggtgttgccgttgtgatg 48607070  T
Q  208 ttgtgggagtttgctagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    |||||||||| |||||||        |||  |||||||||||||||||| | |||| ||||||||||||||||||||||||    
T  48607071 ttgtgggagtctgctagcatttttttggtggctgctgaaatggttatgtgaagaggcttttgttcttttgtttggacttaa 48607151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 122 - 288
Target Start/End: Original strand, 724887 - 725053
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||    
T  724887 cttggttgtgaggtagttaattataacaattgagtaaatcatccgttgtactttgaggactgctagcaggtgttgccgctgtgatgttgtgggagtttgc 724986  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||        |||| ||| |||||||||||||| |||||| |||||||||||| |||||||||||    
T  724987 tagcatttttttggttgctgttgaaatggttatgtgatgaggcttttgttcttttatttggacttaa 725053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 122 - 288
Target Start/End: Original strand, 44458657 - 44458823
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||  ||| |||||||||||||| ||||||||||||||||||||||    
T  44458657 cttggttgtgaggtagttaattataacaattgagtaaatcatccgttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtgggagtttgc 44458756  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||        |||| |||||||||||||||||| |||||| |||||||||||| |||||||||||    
T  44458757 tagcatttttttggttgctgctgaaatggttatgtgatgaggcttttgttcttttatttggacttaa 44458823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 122 - 288
Target Start/End: Complemental strand, 48683890 - 48683724
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  ||| |||||||||||||| ||||||||||||||||||||||    
T  48683890 cttggttgtgaggtagttaattataacaattgagtaagtcatccgttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtgggagtttgc 48683791  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||        |||| |||||||||||||||||| ||| || |||||||||||| |||||||||||    
T  48683790 tagcatttttttggttgctgctgaaatggttatgtgatggggcttttgttcttttatttggacttaa 48683724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 8 - 288
Target Start/End: Original strand, 23593812 - 23594093
Alignment:
Q  8 aattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttgannnnnnnnn 107  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||||||   ||||||  || ||||||||||||||||||| ||||             
T  23593812 aattttcgtgagaatcgtcgtcgtttgtttgattccaaatatcgtgagaattgtcattatttctagtaccacatcaagtatggtgatttgatttttcttt 23593911  T
Q  108 nnnnnnnnnnnnnncttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatg 207  Q
                   || |||||||||||||||||||||||||||||  |||||||||||||||||||||| |||| |||||||||||||| ||||||||    
T  23593912 ttgatttgatttttttttgttgtgaggtagttaattataacaattgaagaagtcatctgttgtactttgagtactgctagcaggtgttgccgctgtgatg 23594011  T
Q  208 ttgtgggagtttgctagc-nnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||||||||||||||||        |||||  ||||||||||||||||| |||||| ||||||||||||||||| ||||||    
T  23594012 ttgtgggagtttgctagcatttttttcggttgttgctgaaatggttatgtgatgaggcttttgttcttttgtttgaacttaa 23594093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 122 - 288
Target Start/End: Original strand, 3415507 - 3415673
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||  ||| |||||||||||||| ||||||||||||||||||||||    
T  3415507 cttggttgtgaggtacttaattataacaattgagtaaatcatccgttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtgggagtttgc 3415606  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||        |||| |||||||||||||||||| |||||| |||||||||||| |||||||||||    
T  3415607 tagcatttttttggttgctgctgaaatggttatgtgatgaggcttttgttcttttatttggacttaa 3415673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 126 - 288
Target Start/End: Original strand, 17967679 - 17967842
Alignment:
Q  126 gttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgctag- 224  Q
    |||||||||||||||||||||||||||||||||||||| |||||| ||||||| |||| |||||||||||||| |||||||||||||||||||| ||||     
T  17967679 gttgtgaggtagttaattataacaattgagtaagtcatatgttgttctttgaggactgctagcaggtgttgccgctgtgatgttgtgggagtttactaga 17967778  T
Q  225 cnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
            ||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  17967779 atttttttcggttgctgctgaaatggttatgtgatgaggcttttgttcttttgtttggacttaa 17967842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 122 - 288
Target Start/End: Original strand, 28588968 - 28589134
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||  ||| |||||||||||||| ||||||||||||||||||||||    
T  28588968 cttggttgtgaggtagttaattataacaatggagtaaatcatctgttctactttgagggctgctagcaggtgttgccgctgtgatgttgtgggagtttgc 28589067  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||        ||||  ||||||||||||||||| |||||| |||||||||||| |||||||||||    
T  28589068 tagcatttttttggttgttgctgaaatggttatgtgatgaggcttttgttcttttatttggacttaa 28589134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 122 - 295
Target Start/End: Complemental strand, 21730332 - 21730156
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||| |||||||| |||||||||||||||||||| |    
T  21730332 cttggttgtgaagtagttaattataacaattgagtaagtcatccgttgtactttgaggactgctagcaagtgttgccgctgtgatgttgtgggagtttac 21730233  T
Q  222 tag--cnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggac-ttaaggctttg 295  Q
    |||  |       | ||| |||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||    
T  21730232 tagctctttttttcagttgctgctgaaatggttatgtcacgaggcttttgttcttttgtttggactttaaggctttg 21730156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 7 - 288
Target Start/End: Original strand, 9662844 - 9663127
Alignment:
Q  7 caattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttgannnnnnnn 106  Q
    ||||||||||||||||||||||||||||||||| | |||||||| ||| |||||  ||||||| ||| ||||| ||| ||||||||||||||            
T  9662844 caattttcgtgagaatcgtcgtcgttcgtttgagtccaaatatcttgaaaattgtcgttatttccagtaccacgtcaggtatggtgacttgatttttctt 9662943  T
Q  107 nnnnnnnnnnnnnnncttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgat 206  Q
                   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||  ||||||||||| || ||||| |    
T  9662944 tttgatttgatttttcttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagggcttctagcaggtgttaccgctgtgtt 9663043  T
Q  207 gttgtgggagtttgctagcnnnnnnncggttactgctgaaatggt--tatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||||||||| |||||||        |||| |||||||||||||  ||||| |||||| |||||||| |||||||||||||||    
T  9663044 gttgtgggagtctgctagcatatttttggttgctgctgaaatggttatatgtgatgaggcttttgttcgtttgtttggacttaa 9663127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 122 - 288
Target Start/End: Complemental strand, 20120653 - 20120488
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  ||| ||| |||||||||  ||||||||||||||||||||||    
T  20120653 cttggttgtgaggtagttaattataacaattgagtaaatcatctgttgtactttgagggctgctagtaggtgttgctgctgtgatgttgtgggagtttgc 20120554  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||        |||| ||||||||||| |||||| |||||| |||||||||||| |||||||||||    
T  20120553 tagcatttttt-ggttgctgctgaaatgattatgtgatgaggcttttgttcttttatttggacttaa 20120488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 122 - 288
Target Start/End: Original strand, 33245993 - 33246159
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||  ||| |||||||||||||| ||||||||||||||||||||||    
T  33245993 cttggttgtgaggtagttaattataacaattgagtaaatcatccgttgtactttcagggctgctagcaggtgttgccgctgtgatgttgtgggagtttgc 33246092  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    || |        |||| |||||||||||||||||| |||||  |||||||||||| |||||||||||    
T  33246093 taccatttttttggttgctgctgaaatggttatgtgatgagacttttgttcttttatttggacttaa 33246159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 122 - 288
Target Start/End: Original strand, 40015041 - 40015207
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||  ||| |||||| |||||||  |||||||||||||||||||||    
T  40015041 cttggttgtgaggtagttaattataacaattgagtaaatcatccgttgtactttgagggctgctagcagatgttgccgttgtgatgttgtgggagtttgc 40015140  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||        ||||  ||||||||||||||||| |||||| |||||||||||| |||||||||||    
T  40015141 tagcatttttttggttgttgctgaaatggttatgtgatgaggcttttgttcttttatttggacttaa 40015207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 126 - 288
Target Start/End: Original strand, 46554855 - 46555017
Alignment:
Q  126 gttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgctagc 225  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||||||||  ||| |||||||||||||| ||||||||||||||||||||||||||    
T  46554855 gttgtgaggtagttaattataacaattgagtaaatcatccgttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtgggagtttgctagc 46554954  T
Q  226 nnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
            |||| |||||||||||||||||| |||| | |||| ||||||| |||||||||||    
T  46554955 atttttttggttgctgctgaaatggttatgtgatgaagcttttattcttttatttggacttaa 46555017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 122 - 288
Target Start/End: Original strand, 46935631 - 46935798
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    |||||||||||||||||||||||||| ||||||||||||||||  |||||||||||| |||| ||||| |||||||| |||||||||||||||||||||     
T  46935631 cttggttgtgaggtagttaattataataattgagtaagtcatccattgtactttgaggactgctagcatgtgttgccgctgtgatgttgtgggagtttgt 46935730  T
Q  222 tagc-nnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||        | ||| ||||||||||||||||||||||||| |||||||||||| ||| |||||||    
T  46935731 tagcatttttttcagttgctgctgaaatggttatgtcatgaggcttttgttcttttatttagacttaa 46935798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 122 - 288
Target Start/End: Complemental strand, 4925573 - 4925407
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||| ||||||||||||||||||||  ||||| |||||||||||||  ||| |||||||||||||| |||||||||||||||||||||     
T  4925573 cttggttgtgaggtaattaattataacaattgagtacatcatccgttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtgggagtttga 4925474  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||        ||||  ||||||||||||||||| |||||| |||||||||||| |||||||||||    
T  4925473 tagcatttttttggttgttgctgaaatggttatgtgatgaggcttttgttcttttatttggacttaa 4925407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 122 - 288
Target Start/End: Original strand, 16276924 - 16277090
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||  || |||||||||||||||||||||||||||||| |||| |    
T  16276924 cttggttgtgaggtagttaattataacaattgagtaaatcatccattgtactttgagagttgctagcaggtgttgccactgtgatgttgtgggtgtttac 16277023  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||        ||||  | ||||||||||||||| |||||| |||||||||||| |||||||||||    
T  16277024 tagcatttttttggttgtttctgaaatggttatgtgatgaggcttttgttcttttatttggacttaa 16277090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 122 - 288
Target Start/End: Complemental strand, 41336932 - 41336764
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  ||  |||||||||||||| ||||||||||||||||||||||    
T  41336932 cttggttgtgaggtagttaattataacaattgagtaaatcatctgttgtactttgagggcttctagcaggtgttgccgctgtgatgttgtgggagtttgc 41336833  T
Q  222 tagc--nnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    || |          ||||  ||||||||||||||||| ||||||||||||||||||| ||| |||||||    
T  41336832 taacattttttgttggttgttgctgaaatggttatgtgatgaggtttttgttcttttattttgacttaa 41336764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 122 - 288
Target Start/End: Complemental strand, 21816030 - 21815864
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||  ||| ||||| |||||||| |||||||||||||||||||| |    
T  21816030 cttggttgtgaggtagttaattataacaattaagtaaatcatccgttgtactttgagggctgctagcatgtgttgccgctgtgatgttgtgggagtttcc 21815931  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    || |        |||| |||||||||||||||||| |||||  |||||||||||| |||||||||||    
T  21815930 taccatttttttggttgctgctgaaatggttatgtgatgagacttttgttcttttatttggacttaa 21815864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 122 - 288
Target Start/End: Complemental strand, 44883372 - 44883206
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    |||||||||||||||||||||||||| |||||||||| ||||| ||||| |||||||  ||| |||||||||||||| || |||||||||||||||||||    
T  44883372 cttggttgtgaggtagttaattataaaaattgagtaaatcatccgttgtgctttgagggctgctagcaggtgttgccgctatgatgttgtgggagtttgc 44883273  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||        ||||  ||||||||||||||||| |||||| ||||||| |||| |||||||||||    
T  44883272 tagcatttttttggttgttgctgaaatggttatgtgatgaggcttttgttattttatttggacttaa 44883206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 122 - 288
Target Start/End: Original strand, 47908360 - 47908526
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||  ||| |||||||||||| | || |||||||||||||||| ||    
T  47908360 cttggttgtgaggtagttaattataaaaattgagtaaatcatctgttgtactttgagggctgctagcaggtgttgtcgctatgatgttgtgggagttcgc 47908459  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||        ||||  |||||||||| |||||| |||||| |||||||||||| |||||||||||    
T  47908460 tagcatttttttggttgttgctgaaatgattatgtgatgaggcttttgttcttttatttggacttaa 47908526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 8 - 225
Target Start/End: Original strand, 5373791 - 5374008
Alignment:
Q  8 aattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttgannnnnnnnn 107  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||   ||||||| ||| ||||| | | ||||||||||||||             
T  5373791 aattttcgtgagaatcgtcgtcgttcgtttgattccaaatatcgtgagaattttcgttattttcagtaccacgttaggtatggtgacttgatttttcttt 5373890  T
Q  108 nnnnnnnnnnnnnncttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatg 207  Q
                  ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||  ||| ||||||||||||||  |||||||    
T  5373891 ttgatttgatttttcttgggtgtgaggtagttaattataacaattgagtaagtcatctattgtactttgagggctgctagcaggtgttgccgttgtgatg 5373990  T
Q  208 ttgtgggagtttgctagc 225  Q
    |||||||||| |||||||    
T  5373991 ttgtgggagtctgctagc 5374008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 122 - 288
Target Start/End: Original strand, 18994320 - 18994486
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    |||||||||||||||||||||||||||||||||||||  ||||  ||||||||||||  ||| ||||||||||||||  |||||||||||||| ||||||    
T  18994320 cttggttgtgaggtagttaattataacaattgagtaaaccatccattgtactttgagggctgctagcaggtgttgccgttgtgatgttgtgggtgtttgc 18994419  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||        ||||  ||||||||||||||||| |||||| |||||||||||| |||||| ||||    
T  18994420 tagcatttttttggttgttgctgaaatggttatgtgatgaggcttttgttcttttatttggatttaa 18994486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 122 - 225
Target Start/End: Original strand, 41858007 - 41858110
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  ||| ||| |||||||||  ||||||||||||||||||||||    
T  41858007 cttggttgtgaggtagttaattataacaattgagtaaatcatctgttgtactttgagggctgctagtaggtgttgctgctgtgatgttgtgggagtttgc 41858106  T
Q  222 tagc 225  Q
    ||||    
T  41858107 tagc 41858110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 140 - 288
Target Start/End: Original strand, 44522310 - 44522458
Alignment:
Q  140 aattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgctagcnnnnnnncggttac 239  Q
    |||||||||||||||||||||||||||||||||||||   |||| || |||||||||||  | |||||||||||||||||||||||       ||||| |    
T  44522310 aattataacaattgagtaagtcatctgttgtactttggagactgctaccaggtgttgccgttatgatgttgtgggagtttgctagctttttttcggttgc 44522409  T
Q  240 tgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    |||||| |||||||||| |||||| |||||||||||| |||||||||||    
T  44522410 tgctgatatggttatgtgatgaggcttttgttcttttatttggacttaa 44522458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 122 - 225
Target Start/End: Original strand, 48951636 - 48951739
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  ||| ||| |||||||||  ||||||||||||||||||||||    
T  48951636 cttggttgtgaggtagttaattataacaattgagtaaatcatctgttgtactttgagggctgctagtaggtgttgctgctgtgatgttgtgggagtttgc 48951735  T
Q  222 tagc 225  Q
    ||||    
T  48951736 tagc 48951739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 17967560 - 17967650
Alignment:
Q  8 aattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||||||  ||||||| ||||||||| | ||||||||||| ||||    
T  17967560 aattttcgtgagaatcgtcgtcgtttgtttgattccaaatatcgtgagaattgtcgttatttccagaaccacgttaagtatggtgatttga 17967650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 44521330 - 44521420
Alignment:
Q  8 aattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||||||||||||||||||||||| ||||||||  |||||||||||||||||  ||||||| ||| ||||| ||||||||||||| ||||    
T  44521330 aattttcgtgagaatcgtcgtcgtttgtttgattctaaatatcgtgagaattgtcgttattttcagtaccacgtcaagtatggtgatttga 44521420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 8 - 93
Target Start/End: Complemental strand, 47504364 - 47504279
Alignment:
Q  8 aattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtga 93  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||||||  ||||||| ||| ||||| |||| ||||||||    
T  47504364 aattttcgtgagaatcgtcgtcgtttgtttgattccaaatatcgtgagaattgtcgttatttccagtaccacgtcaaatatggtga 47504279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 7 - 94
Target Start/End: Original strand, 46935534 - 46935621
Alignment:
Q  7 caattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgac 94  Q
    |||||||||||||||||||||| ||| |||||||| ||||||||||||||||||  ||||||| ||||||||| ||  ||||||||||    
T  46935534 caattttcgtgagaatcgtcgtagtttgtttgattccaaatatcgtgagaattgtcgttatttccagaaccacgtcgggtatggtgac 46935621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 7 - 273
Target Start/End: Original strand, 8392716 - 8392987
Alignment:
Q  7 caattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttgannnnnnnn 106  Q
    |||||||| ||||||| || ||||||||||||||| ||||||||||||||||| |  |||||| ||  ||| | ||| ||||||||||||||            
T  8392716 caattttcatgagaattgttgtcgttcgtttgattccaaatatcgtgagaatttccattatttccatgaccgcgtcaggtatggtgacttgattattctt 8392815  T
Q  107 nnnnnnnnnnnnnnncttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttag----caggtgttgccactg 202  Q
                   |||||||||||||||||||||| ||||||| ||||||| |||||||||||| ||  | |||| |||    |||||||||||||||    
T  8392816 ttttatttgatttttcttggttgtgaggtagttaattctaacaatcgagtaaggcatctgttgtacgttatggactgctagctaacaggtgttgccactg 8392915  T
Q  203 tgatgttgtgggagtttgctagc-nnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttct 273  Q
    ||||||| ||||||||| |||||        ||||| || |||||||||||| ||||||||| |||||||||    
T  8392916 tgatgttttgggagttttctagcatttttttcggttgctcctgaaatggttaagtcatgaggcttttgttct 8392987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 21730449 - 21730358
Alignment:
Q  8 aattttcgtgagaa---tcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgactt 96  Q
    ||||||||||||||   || || ||||||||||||||| |||||||||||||||||  ||||||| ||||||||| ||| ||||||||||||    
T  21730449 aattttcgtgagaaatatcatcatcgttcgtttgattttaaatatcgtgagaattgtcgttatttccagaaccacgtcaggtatggtgactt 21730358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 30759335 - 30759425
Alignment:
Q  8 aattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    |||||||||||||||| |||| ||| |||||||| |||||||| |||||| ||  |||||||  || ||||| ||||||||||||| ||||    
T  30759335 aattttcgtgagaatcctcgttgtttgtttgattccaaatatcatgagaaatgtcgttatttctagtaccacgtcaagtatggtgatttga 30759425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 98
Target Start/End: Original strand, 3415422 - 3415483
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    |||||||||||||||||| |||||| ||||||| ||| || |||||| ||||| ||||||||    
T  3415422 tgatttcaaatatcgtgaaaattgccgttattttcagtacaacatcaggtatgatgacttga 3415483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 98
Target Start/End: Original strand, 16276839 - 16276900
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    |||||||||||||||||||||||| |||||||| ||| || || ||| ||||| ||||||||    
T  16276839 tgatttcaaatatcgtgagaattgttgttatttccagtacaacgtcaggtatgatgacttga 16276900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 98
Target Start/End: Original strand, 18994235 - 18994296
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    |||||||||||||||||||||||| |||||||| ||| || || ||| ||||| ||||||||    
T  18994235 tgatttcaaatatcgtgagaattgttgttattttcagtacaacgtcatgtatgatgacttga 18994296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 98
Target Start/End: Complemental strand, 21816115 - 21816054
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||||||||||||||||||||||| ||||||| ||| || || ||| ||||| ||||||||    
T  21816115 tgatttcaaatatcgtgagaattgccgttattttcagtacaacgtcaggtatgatgacttga 21816054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 98
Target Start/End: Original strand, 33245908 - 33245969
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||||||||||||||||||||||| ||||||| ||| || || ||| ||||| ||||||||    
T  33245908 tgatttcaaatatcgtgagaattgccgttattttcagtacaacgtcaggtatgatgacttga 33245969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 98
Target Start/End: Original strand, 44458572 - 44458633
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||||||||||||||||||||||| ||||||| ||| || || ||| ||||| ||||||||    
T  44458572 tgatttcaaatatcgtgagaattgccgttatttccagtacaacgtcaggtatgatgacttga 44458633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 98
Target Start/End: Complemental strand, 44883457 - 44883396
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||||||||||||||||||||||| ||||||| ||| || || ||| ||||| ||||||||    
T  44883457 tgatttcaaatatcgtgagaattgccgttatttccagtacaacgtcaggtatgatgacttga 44883396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 98
Target Start/End: Original strand, 46554766 - 46554827
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||||||||||||||||||||||| ||||||| ||| || || ||| ||||| ||||||||    
T  46554766 tgatttcaaatatcgtgagaattgccgttatttccagtacaacgtcatgtatgatgacttga 46554827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 98
Target Start/End: Original strand, 47908275 - 47908336
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||||||||||||||||||||||| ||||||| ||| || || ||| ||||| ||||||||    
T  47908275 tgatttcaaatatcgtgagaattgcagttatttccagtacaacgtcaggtatgatgacttga 47908336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 69
Target Start/End: Original strand, 724802 - 724834
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttattt 69  Q
    |||||||||||||||||||||||||||||||||    
T  724802 tgatttcaaatatcgtgagaattgctgttattt 724834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 47253797 - 47253888
Alignment:
Q  7 caattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||| ||||||||||||| ||||| | |||||||||| | || |||||||| | |||| ||| || || ||||||| |||| |||||||||    
T  47253797 caattatcgtgagaatcgttgtcgtccttttgatttcagacattgtgagaatcggtgttgtttccataatcacatcaggtatcgtgacttga 47253888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 98
Target Start/End: Complemental strand, 20120738 - 20120677
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||||||||||| ||||||||||| ||||||| ||| || || ||| ||||| ||||||||    
T  20120738 tgatttcaaatattgtgagaattgccgttatttccagtacaacgtcaggtatgatgacttga 20120677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 98
Target Start/End: Original strand, 40014956 - 40015017
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    |||||||||||||||||||||||| |||||||| ||| || || || |||||  ||||||||    
T  40014956 tgatttcaaatatcgtgagaattgttgttatttccagtacaacgtcgagtataatgacttga 40015017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 98
Target Start/End: Original strand, 41857922 - 41857983
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||||||||||| ||||||||||| ||||||| ||| || || ||| ||||| ||||||||    
T  41857922 tgatttcaaatattgtgagaattgccgttatttccagtacaacgtcaggtatgatgacttga 41857983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 98
Target Start/End: Complemental strand, 48683975 - 48683914
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||||||||||||||||||||||  ||||||| ||| || || ||| ||||| ||||||||    
T  48683975 tgatttcaaatatcgtgagaattgtcgttatttccagtactacgtcatgtatgatgacttga 48683914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 98
Target Start/End: Original strand, 48951551 - 48951612
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||||| ||||||||||||||||| ||||||| ||| || || ||| ||||| ||||||||    
T  48951551 tgatttcgaatatcgtgagaattgccgttatttccagtacaacgtcaggtatgatgacttga 48951612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Complemental strand, 4925314 - 4925278
Alignment:
Q  303 cgcggttttagaaacaatgacaattctcacgataatt 339  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  4925314 cgcggttctagaaacaacgacaattctcacgataatt 4925278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Original strand, 16277183 - 16277219
Alignment:
Q  303 cgcggttttagaaacaatgacaattctcacgataatt 339  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  16277183 cgcggttctagaaacaacgacaattctcacgataatt 16277219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Original strand, 28589227 - 28589263
Alignment:
Q  303 cgcggttttagaaacaatgacaattctcacgataatt 339  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  28589227 cgcggttctagaaacaacgacaattctcacgataatt 28589263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Original strand, 33246252 - 33246288
Alignment:
Q  303 cgcggttttagaaacaatgacaattctcacgataatt 339  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  33246252 cgcggttatagaaacaacgacaattctcacgataatt 33246288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Original strand, 40015300 - 40015336
Alignment:
Q  303 cgcggttttagaaacaatgacaattctcacgataatt 339  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  40015300 cgcggttctagaaacaacgacaattctcacgataatt 40015336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Complemental strand, 41336672 - 41336636
Alignment:
Q  303 cgcggttttagaaacaatgacaattctcacgataatt 339  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  41336672 cgcggttctagaaacaacgacaattctcacgataatt 41336636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Original strand, 44458916 - 44458952
Alignment:
Q  303 cgcggttttagaaacaatgacaattctcacgataatt 339  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  44458916 cgcggttctagaaacaacgacaattctcacgataatt 44458952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Original strand, 46555108 - 46555144
Alignment:
Q  303 cgcggttttagaaacaatgacaattctcacgataatt 339  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  46555108 cgcggttctagaaacaacgacaattctcacgataatt 46555144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 110; Significance: 2e-55; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 122 - 288
Target Start/End: Original strand, 45408620 - 45408786
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||| ||||||| ||||||||||||||||||||||    
T  45408620 cttggttgtgaggtagttaattataacaattgagtaagtcatgtgttgtactttgagcactgctagcagatgttgccgctgtgatgttgtgggagtttgc 45408719  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||       ||||| ||| |||||||||||||| |||||| ||||||||||||||||||||||||    
T  45408720 tagcattttttcggttgctgttgaaatggttatgtgatgaggcttttgttcttttgtttggacttaa 45408786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 122 - 288
Target Start/End: Complemental strand, 42736265 - 42736099
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||  ||| |||||||||||||| ||||||||||||||||||||||    
T  42736265 cttggttgtgaagtagtaaattataacaattgagtaagtcatatgttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtgggagtttgc 42736166  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||        |||| |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  42736165 tagcatttttttggttgctgctgaaatggttatgtgatgaggtttttgttcttttgtttggacttaa 42736099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 122 - 288
Target Start/End: Complemental strand, 6094000 - 6093834
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  ||| |||||||||||||| ||||||||||||| ||||||||    
T  6094000 cttggttgtgaggtagttaattataacaattgagtaagtcatccgttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtgtgagtttgc 6093901  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||        |||| |||||||||||||||||| |||||| |||||||||||| |||||||||||    
T  6093900 tagcatttttttggttgctgctgaaatggttatgtgatgaggcttttgttcttttatttggacttaa 6093834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 122 - 288
Target Start/End: Complemental strand, 277406 - 277240
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  ||| ||||| |||||||| ||||||||||||||||||||||    
T  277406 cttggttgtgaggtagttaattataacaattgagtaaatcatctgttgtactttgagggctgctagcaagtgttgccgctgtgatgttgtgggagtttgc 277307  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||        ||||  ||||||||||||||||| |||||| |||||||||||| |||||||||||    
T  277306 tagcatttttttggttgatgctgaaatggttatgtgatgaggcttttgttcttttatttggacttaa 277240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 122 - 288
Target Start/End: Original strand, 638443 - 638609
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  ||| ||||| |||||||| ||||||||||||||||||||||    
T  638443 cttggttgtgaggtagttaattataacaattgagtaaatcatctgttgtactttgagggctgctagcaagtgttgccgctgtgatgttgtgggagtttgc 638542  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||        ||||  ||||||||||||||||| |||||| |||||||||||| |||||||||||    
T  638543 tagcatttttttggttgatgctgaaatggttatgtgatgaggcttttgttcttttatttggacttaa 638609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 122 - 288
Target Start/End: Original strand, 824249 - 824415
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  ||| ||||| |||||||| ||||||||||||||||||||||    
T  824249 cttggttgtgaggtagttaattataacaattgagtaaatcatctgttgtactttgagggctgctagcaagtgttgccgctgtgatgttgtgggagtttgc 824348  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||        ||||  ||||||||||||||||| |||||| |||||||||||| |||||||||||    
T  824349 tagcatttttttggttgatgctgaaatggttatgtgatgaggcttttgttcttttatttggacttaa 824415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 127 - 288
Target Start/End: Original strand, 30556098 - 30556260
Alignment:
Q  127 ttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgctagc- 225  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||||||| ||||| |     
T  30556098 ttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgaggactgctagcaggtgttgccgctgtgatgttgtgggagtctgctaaca 30556197  T
Q  226 nnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
           ||||| |||||||||||||||||| |||||| |||||||||||||||| |||||||    
T  30556198 tttttttcggttgctgctgaaatggttatgtgatgaggcttttgttcttttgttttgacttaa 30556260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 122 - 286
Target Start/End: Original strand, 28085299 - 28085466
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||||||||| |    
T  28085299 cttgattgtgaagtagttaattataacaattgagtaagtcatctgttgtactttgaggactgctagcaggtgttgccgctgtgatgttgtgggagtttac 28085398  T
Q  222 tagc---nnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggactt 286  Q
    ||||          || || ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  28085399 tagctcttttttttcgattgctgctgaaatggttatgtcatgaggcttttgttcttttgtttggactt 28085466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 7 - 288
Target Start/End: Complemental strand, 36192207 - 36191926
Alignment:
Q  7 caattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttgannnnnnnn 106  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| | ||| ||| ||||||||||||||            
T  36192207 caatttttgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgccgttatttccagtatcacgtcaggtatggtgacttgatttttctt 36192108  T
Q  107 nnnnnnnnnnnnnnncttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgat 206  Q
                   ||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||   || |||||||||| ||| ||| |||    
T  36192107 tttgatttgatttttcttggttgtgaggtagttaattataacaattaagtaagttatccgttgtactttgagggttgctagcaggtgtagcccctgcgat 36192008  T
Q  207 gttgtgggagtttgctagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    |||||||||||||||||||        | || ||| |||||||||||||| |||||| ||||||||||||||||| ||||||    
T  36192007 gttgtgggagtttgctagcatttttttgattgctgttgaaatggttatgtgatgaggcttttgttcttttgtttgaacttaa 36191926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 122 - 288
Target Start/End: Original strand, 38060640 - 38060806
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||  ||| |||||||| ||||| ||||||||||||||||||||||    
T  38060640 cttggttgtgaggtagttaattataacaattgagtaaatcatctattgtactttgagggctgctagcaggttttgccgctgtgatgttgtgggagtttgc 38060739  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||        ||||  ||||||||||||||||| |||||| |||||||||||| |||||||||||    
T  38060740 tagcatttttttggttgatgctgaaatggttatgtgatgaggcttttgttcttttatttggacttaa 38060806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 7 - 217
Target Start/End: Complemental strand, 39858766 - 39858556
Alignment:
Q  7 caattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttgannnnnnnn 106  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| ||||| |||||||| ||| ||||| ||| ||||||||||||||            
T  39858766 caattttcgtgagaatcgtcgtcgttcgtttgattccaaatatcgtgaaaattgttgttatttccagtaccacgtcaggtatggtgacttgatttttctt 39858667  T
Q  107 nnnnnnnnnnnnnnncttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgat 206  Q
                   ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||| |||||||    
T  39858666 tttgatttgatatttcttggttgtgatgtagttaattataacaattgagtaagtcatctgttgtactttgagggctgctagcaggtgttgccgctgtgat 39858567  T
Q  207 gttgtgggagt 217  Q
    |||||||||||    
T  39858566 gttgtgggagt 39858556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 122 - 288
Target Start/End: Complemental strand, 44256762 - 44256596
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    |||||||||||||||||||||||||||||||||| |  ||||| |||||||||||||  ||| |||||||||||||| ||||||||||||||||||||||    
T  44256762 cttggttgtgaggtagttaattataacaattgaggatatcatccgttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtgggagtttgc 44256663  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||        |||| |||||||||||||||||| ||||||||||||||| ||| |||||||||||    
T  44256662 tagcatttttttggttgctgctgaaatggttatgttatgaggtttttgttcatttatttggacttaa 44256596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 10 - 288
Target Start/End: Original strand, 43694456 - 43694734
Alignment:
Q  10 ttttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttgannnnnnnnnnn 109  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||||||||  ||||||| ||| ||||| |||  |||||||||||||               
T  43694456 ttttcgtgagaatcgccgtcgttcgtttgattccaaatatcgtgagaattgtcgttatttccagtaccacgtcagatatggtgacttgatttttcttttt 43694555  T
Q  110 nnnnnnnnnnnncttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgtt 209  Q
                ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||  ||| ||||||||||||||  |||||| ||    
T  43694556 gatttaatttttcttggttgtgaggtagttaattatagcaattgagtaagtcatgtgttgtactttgagggctgctagcaggtgttgccgttgtgatttt 43694655  T
Q  210 gtgggagtttgctagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    |||||||| |||||||        |||| |||||||||| |||||||  ||||| ||||||||||||||||||||||||    
T  43694656 gtgggagtctgctagcatttttttggttgctgctgaaattgttatgtggtgaggcttttgttcttttgtttggacttaa 43694734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 8 - 288
Target Start/End: Original strand, 13140602 - 13140882
Alignment:
Q  8 aattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttgannnnnnnnn 107  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||| ||| ||||| ||| ||||||||||||||             
T  13140602 aattgtcgtgagaatcgtcgtcgttcgtttgattccaaatatcgtgagaattgtcgttatttccagtaccacgtcaggtatggtgacttgatttttcttt 13140701  T
Q  108 nnnnnnnnnnnnnncttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatg 207  Q
                  |||||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||  ||| | |||||||||||| || ||||     
T  13140702 ttgatttgatatttcttggttgtgaggtagttaattataataattgagtaagtcatgtgttgtactttaagggctgcttgcaggtgttgccgctttgatt 13140801  T
Q  208 ttgtgggagtttgctagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    |||||| ||| |||||||        |||| |||||||||| ||||||| |||||| ||||||||||||||||||||||||    
T  13140802 ttgtggaagtctgctagcatttttttggttgctgctgaaattgttatgtgatgaggcttttgttcttttgtttggacttaa 13140882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 122 - 284
Target Start/End: Complemental strand, 40617194 - 40617031
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||| ||||| |||||||| | ||||||||||||||||||||    
T  40617194 cttggttgtgaggtagttaattataacaattgagtaaatcatccgttgtactttaagaactgctagcaagtgttgccgcagtgatgttgtgggagtttgc 40617095  T
Q  222 tagc-nnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggac 284  Q
    || |        ||||| ||||||||||||||||||| ||||| ||||||||||||||||||||    
T  40617094 taacatttttttcggttgctgctgaaatggttatgtcgtgaggcttttgttcttttgtttggac 40617031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 122 - 288
Target Start/End: Original strand, 2081675 - 2081841
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||  ||| |||||||||||||| || |||||||||||||||||||    
T  2081675 cttggttgtgaggtagttaattataacaattgagtaaatcattcgttgtactttgagggctgctagcaggtgttgccgctctgatgttgtgggagtttgc 2081774  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||        ||||  ||||||||||||||||| |||||| |||||||||||| |||||||||||    
T  2081775 tagcatttttttggttgttgctgaaatggttatgtgatgaggcttttgttcttttatttggacttaa 2081841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 122 - 288
Target Start/End: Original strand, 15882833 - 15882999
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||  ||| |||||||||||||| ||||||||||||||||||||||    
T  15882833 cttggttgtgaggtagttaattataacaattgagtaaatcatccgttgtaatttgagggctgctagcaggtgttgccgctgtgatgttgtgggagtttgc 15882932  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
     |||        |||| |||||||||||||||||| |||||| ||||||| |||| |||||||||||    
T  15882933 aagcatttttttggttcctgctgaaatggttatgtgatgaggcttttgtttttttatttggacttaa 15882999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 122 - 288
Target Start/End: Complemental strand, 18956123 - 18955957
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  ||| ||| ||||||||||  |||||||||||||| ||||||    
T  18956123 cttggttgtgaggtagttaattataacaattgagtaaatcatctgttgtactttgagcgctgctagtaggtgttgccgttgtgatgttgtgggggtttgc 18956024  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||        ||||  ||||||||||||||||| |||||| |||||||||||| |||||||||||    
T  18956023 tagcatttttttggttgttgctgaaatggttatgtgatgaggcttttgttcttttatttggacttaa 18955957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 123 - 284
Target Start/End: Complemental strand, 27913065 - 27912904
Alignment:
Q  123 ttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgct 222  Q
    ||||||||||| |||||||||||||||||||||||| ||||| |||||||||||||  ||| |||||||||||||| |||||||||||||||||||||||    
T  27913065 ttggttgtgagatagttaattataacaattgagtaaatcatccgttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtgggagtttgct 27912966  T
Q  223 agcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggac 284  Q
    |||         ||| |||||||||||||||||| |||||| |||||||||||| |||||||    
T  27912965 agcattttttttgttgctgctgaaatggttatgtgatgaggcttttgttcttttatttggac 27912904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 123 - 284
Target Start/End: Complemental strand, 27959484 - 27959323
Alignment:
Q  123 ttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgct 222  Q
    ||||||||||| |||||||||||||||||||||||| ||||| |||||||||||||  ||| |||||||||||||| |||||||||||||||||||||||    
T  27959484 ttggttgtgagatagttaattataacaattgagtaaatcatccgttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtgggagtttgct 27959385  T
Q  223 agcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggac 284  Q
    |||         ||| |||||||||||||||||| |||||| |||||||||||| |||||||    
T  27959384 agcattttttttgttgctgctgaaatggttatgtgatgaggcttttgttcttttatttggac 27959323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 123 - 288
Target Start/End: Complemental strand, 42645984 - 42645818
Alignment:
Q  123 ttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgct 222  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||| |||||| |||||||||||||| |    
T  42645984 ttggttgtgaggtagttaattataacaattgagtaagtcatttgttgtactttgaggactgctagcaggtgttgccgctgtgacgttgtgggagtttgtt 42645885  T
Q  223 agc-nnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    |||        |||||   | |||||||||||||| |||| | ||||||||||||||||||||||||    
T  42645884 agcatttttttcggttgtcggtgaaatggttatgtgatgaagcttttgttcttttgtttggacttaa 42645818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 122 - 288
Target Start/End: Original strand, 40303771 - 40303941
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||| |||||||||||||||||| | |    
T  40303771 cttggttgtgatgtagttaattataacaattgagtaagtcatctgttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtgggagtctac 40303870  T
Q  222 ----tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
        ||||        || | |||||||||||||||||| |||||| |||||||||||||||| |||||||    
T  40303871 tatatagcatttgtttggatgctgctgaaatggttatgtgatgaggcttttgttcttttgtttagacttaa 40303941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 122 - 263
Target Start/End: Original strand, 18088921 - 18089064
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||  ||||||||||||||||||||     
T  18088921 cttggttatgaggcagttatttataacaattgagtaagtcatctgttgtactttgaggactgatagcaggtgttgccgttgtgatgttgtgggagtttgt 18089020  T
Q  222 tagc--nnnnnnncggttactgctgaaatggttatgtcatgagg 263  Q
    ||||         ||||| |||||||||||||||||||||||||    
T  18089021 tagctttttttttcggttgctgctgaaatggttatgtcatgagg 18089064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 122 - 225
Target Start/End: Complemental strand, 30111395 - 30111292
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||| |||| |||||||||||||| |||||||||||||||||||| |    
T  30111395 cttggttgtgaagtagttaattataacaattaagtaagtcatccgttgtactttgaggactgctagcaggtgttgccgctgtgatgttgtgggagtttac 30111296  T
Q  222 tagc 225  Q
    ||||    
T  30111295 tagc 30111292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 122 - 288
Target Start/End: Original strand, 23346562 - 23346728
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    |||||||||||| |||||||||||||||||||||||| ||||| |||||||||||||  ||| |||||||| ||||| || ||||||||||||||| | |    
T  23346562 cttggttgtgagttagttaattataacaattgagtaaatcatcagttgtactttgagggctgctagcaggttttgccgctctgatgttgtgggagtctcc 23346661  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||         |||  ||||||||||||||||| |||||| |||||||||||| |||||||||||    
T  23346662 tagcattttttttgttgttgctgaaatggttatgtgatgaggcttttgttcttttatttggacttaa 23346728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 143 - 288
Target Start/End: Original strand, 25583023 - 25583168
Alignment:
Q  143 tataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgctagcnnnnnnncggttactgc 242  Q
    |||||||||||||||| ||||| |||||||||||||  ||| |||||||||||||| ||||||||||||||||||||||||||        |||| ||||    
T  25583023 tataacaattgagtaaatcatccgttgtactttgagggctgctagcaggtgttgcctctgtgatgttgtgggagtttgctagcatttttttggttgctgc 25583122  T
Q  243 tgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    |||||| ||||||| ||||||||||||| ||||| ||||| |||||    
T  25583123 tgaaattgttatgtgatgaggtttttgtccttttatttgggcttaa 25583168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 122 - 288
Target Start/End: Complemental strand, 3850702 - 3850533
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||| ||||||| ||||||||||||| | |    
T  3850702 cttggttgtgatgtagttaattataacaattgagtaagtcatatgttgtactttgag-gctgttagcaggtgttaccactgtaatgttgtgggagtctac 3850604  T
Q  222 ----tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
        || |         | | |||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  3850603 tatataacatttttttagatgctgctgaaatggttatgtgatgaggcttttgttcttttgtttggacttaa 3850533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 6095580 - 6095493
Alignment:
Q  9 attttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgactt 96  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||| ||||| ||||||||| ||||||    
T  6095580 attttcgtgagaatcgtcatcgttcgtttgatttcaaatatcgtgagaattgccgttatttccagtaccacgtcaagtatgatgactt 6095493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 167 - 288
Target Start/End: Complemental strand, 16096517 - 16096396
Alignment:
Q  167 ttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgctagcnnnnnnncggttactgctgaaatggttatgtcatgaggttt 266  Q
    ||||||||||||  ||| |||||||||||||| ||||||||||||||||||||||||||        |||| ||||||||||||||| || |||||| ||    
T  16096517 ttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtgggagtttgctagcatttttttggttgctgctgaaatggttaagtgatgaggctt 16096418  T
Q  267 ttgttcttttgtttggacttaa 288  Q
    |||||||||| |||||||||||    
T  16096417 ttgttcttttatttggacttaa 16096396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 30555976 - 30556066
Alignment:
Q  8 aattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||||||  ||||||| ||| ||||| ||||||||||||| ||||    
T  30555976 aattttcgtgagaatcgtcgtcgtttgtttgattccaaatatcgtgagaattgtcgttatttccagtaccacgtcaagtatggtgatttga 30556066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 45408519 - 45408609
Alignment:
Q  8 aattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||||||  ||||||| ||| ||||| ||||||||||||| ||||    
T  45408519 aattttcgtgagaatcgtcgtcgtttgtttgattccaaatatcgtgagaattgtcgttatttccagtaccacgtcaagtatggtgatttga 45408609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 3850804 - 3850713
Alignment:
Q  7 caattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||  ||||||| ||| ||||| | | ||||||||||||||    
T  3850804 caattttcgtgagaatcgttgtcgttcgtttgattccaaatatcgtgagaattgtcgttatttccagtaccacttaaggtatggtgacttga 3850713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 42646101 - 42646011
Alignment:
Q  8 aattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||||||||| ||||||||||||| |||||||| ||||||||||||||||||  ||||||| ||| ||||| ||||||||||||| ||||    
T  42646101 aattttcgtgataatcgtcgtcgtttgtttgattccaaatatcgtgagaattgtcgttatttccagtaccacgtcaagtatggtgatttga 42646011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 79
Target Start/End: Original strand, 40303657 - 40303729
Alignment:
Q  7 caattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccac 79  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||| ||| |||||    
T  40303657 caattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgaaaattgtcgttatttccagtaccac 40303729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 18088824 - 18088915
Alignment:
Q  7 caattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||||||||||||||||||||||||  ||||||| |||||||| |||||||||| ||||||| || |||||| |||  |||||||||||||    
T  18088824 caattttcgtgagaatcgtcgtcgttaatttgattccaaatatcatgagaattgcagttattttcataaccacgtcagatatggtgacttga 18088915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 122 - 288
Target Start/End: Original strand, 4622158 - 4622310
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||||              || |||||||||||||| |||||||||||||| |||||||    
T  4622158 cttggttgtgaggtaattaattataacaattgagtaaatcatctgt--------------tgctagcaggtgttgccgctgtgatgttgtggaagtttgc 4622243  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    || |        |||| ||||||| |||||||||| |||||| |||||||||||| |||||||||||    
T  4622244 taccatttttttggttgctgctgagatggttatgtgatgaggcttttgttcttttatttggacttaa 4622310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 42736362 - 42736271
Alignment:
Q  7 caattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||||||||||||||| | ||||||||||||||| |||||||| |||||||||  ||||||| ||| | ||| ||| ||||||||||||||    
T  42736362 caattttcgtgagaatccttgtcgttcgtttgattccaaatatcatgagaattgtcgttatttccagtatcacgtcaggtatggtgacttga 42736271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 21 - 98
Target Start/End: Complemental strand, 30111496 - 30111419
Alignment:
Q  21 atcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    |||||| ||||||||||||||| |||||||||||||||||  ||||||| ||||||||| ||| ||||  ||||||||    
T  30111496 atcgtcatcgttcgtttgattttaaatatcgtgagaattgtcgttattttcagaaccacgtcaggtattatgacttga 30111419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 122 - 158
Target Start/End: Original strand, 26950212 - 26950248
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaa 158  Q
    |||||||||||||||||||||||||||||||||||||    
T  26950212 cttggttgtgaggtagttaattataacaattgagtaa 26950248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 122 - 162
Target Start/End: Complemental strand, 41545528 - 41545488
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtca 162  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  41545528 cttggttgcgaggtagttaattataacaattgagtaagtca 41545488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 98
Target Start/End: Original strand, 638358 - 638419
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||||||||||||||||||||||| ||||||| ||| || || ||| ||||| ||||||||    
T  638358 tgatttcaaatatcgtgagaattgccgttatttccagtacaacgtcaggtatgatgacttga 638419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 98
Target Start/End: Original strand, 38060555 - 38060616
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||||||||||||||||||||||| ||||||| ||| || || ||| ||||| ||||||||    
T  38060555 tgatttcaaatatcgtgagaattgccgttattttcagtacaacgtcaggtatgatgacttga 38060616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 295
Target Start/End: Complemental strand, 30106283 - 30106237
Alignment:
Q  250 gttatgtcatgaggtttttgttcttttgtttgga-cttaaggctttg 295  Q
    |||||||||||||| |||||||||||||||||||  |||||||||||    
T  30106283 gttatgtcatgaggcttttgttcttttgtttggattttaaggctttg 30106237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 98
Target Start/End: Complemental strand, 40617264 - 40617218
Alignment:
Q  52 tgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    |||||||||| ||||||| ||||||||| ||| ||||||||||||||    
T  40617264 tgagaattgccgttattttcagaaccacgtcacgtatggtgacttga 40617218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 98
Target Start/End: Complemental strand, 277491 - 277430
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||||||||||||||||||||||| ||||||| ||| || || ||| | ||| ||||||||    
T  277491 tgatttcaaatatcgtgagaattgccgttatttccagtacaacgtcaggcatgatgacttga 277430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 98
Target Start/End: Original strand, 824164 - 824225
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||||||||||||||||||||||| ||||||| ||| || || ||| | ||| ||||||||    
T  824164 tgatttcaaatatcgtgagaattgccgttatttccagtacaacgtcaggcatgatgacttga 824225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 98
Target Start/End: Original strand, 15882748 - 15882809
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    |||||| |||||||||||||||||| ||||||| ||| || || ||| ||||| ||||||||    
T  15882748 tgattttaaatatcgtgagaattgccgttatttccagtacaacgtcaggtatgatgacttga 15882809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 98
Target Start/End: Complemental strand, 41545595 - 41545534
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    |||||||||||||||||||||||   ||||||| ||| ||||| ||| ||||| ||||||||    
T  41545595 tgatttcaaatatcgtgagaattatcgttatttccagtaccacgtcaggtatgatgacttga 41545534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Complemental strand, 277145 - 277109
Alignment:
Q  303 cgcggttttagaaacaatgacaattctcacgataatt 339  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  277145 cgcggttctagaaacaacgacaattctcacgataatt 277109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Original strand, 638704 - 638740
Alignment:
Q  303 cgcggttttagaaacaatgacaattctcacgataatt 339  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  638704 cgcggttctagaaacaacgacaattctcacgataatt 638740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Original strand, 824510 - 824546
Alignment:
Q  303 cgcggttttagaaacaatgacaattctcacgataatt 339  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  824510 cgcggttctagaaacaacgacaattctcacgataatt 824546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Original strand, 4622403 - 4622439
Alignment:
Q  303 cgcggttttagaaacaatgacaattctcacgataatt 339  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  4622403 cgcggttctagaaacaacgacaattctcacgataatt 4622439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Complemental strand, 18955657 - 18955621
Alignment:
Q  303 cgcggttttagaaacaatgacaattctcacgataatt 339  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  18955657 cgcggttctagaaacaacgacaattctcacgataatt 18955621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 69
Target Start/End: Original strand, 26950160 - 26950192
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttattt 69  Q
    ||||||||||||||||||||||||| |||||||    
T  26950160 tgatttcaaatatcgtgagaattgccgttattt 26950192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Complemental strand, 41545385 - 41545349
Alignment:
Q  303 cgcggttttagaaacaatgacaattctcacgataatt 339  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  41545385 cgcggttctagaaacaacgacaattctcacgataatt 41545349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 102; Significance: 1e-50; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 122 - 288
Target Start/End: Original strand, 744994 - 745160
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||  |||||||||||||||||| ||||||||||||||||||||||    
T  744994 cttggttgtgaggtaattaattataacaattgagtaaatcatccgttgtactttgagggctgttagcaggtgttgccgctgtgatgttgtgggagtttgc 745093  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||        || | |||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  745094 tagcatttttttggctgctgctgaaatggttatgtgatgaggtttttgttcttttatttggacttaa 745160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 122 - 288
Target Start/End: Complemental strand, 39589075 - 39588909
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||  ||| |||||||||||||| ||||||||||||||||||||||    
T  39589075 cttggttgtgaggtagttaattataacaattgagtaaatcatccgttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtgggagtttgc 39588976  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||        |||| |||||||||||||||||| |||||| |||||||||||| |||||||||||    
T  39588975 tagcatttttttggttgctgctgaaatggttatgtgatgaggcttttgttcttttatttggacttaa 39588909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 122 - 288
Target Start/End: Complemental strand, 9592424 - 9592258
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  ||| ||||| ||||||||  |||||||||||||||||||||    
T  9592424 cttggttgtgaggtagttaattataacaattgagtaaatcatctgttgtactttgagggctgctagcaagtgttgccgttgtgatgttgtgggagtttgc 9592325  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||        |||| |||||||||||||||||| |||||| |||||||||||| |||||||||||    
T  9592324 tagcatttttttggttgctgctgaaatggttatgtgatgaggcttttgttcttttatttggacttaa 9592258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 123 - 288
Target Start/End: Complemental strand, 27551399 - 27551233
Alignment:
Q  123 ttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgct 222  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||| |||||||||||||||||||||||||||||||    
T  27551399 ttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgaggacttctagcagatgttgccactgtgatgttgtgggagtttgct 27551300  T
Q  223 agc-nnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    |||        || || | |||||||||||||||| |||||| |||||||||||| |||||||||||    
T  27551299 agcattttttccgattgcagctgaaatggttatgtgatgaggcttttgttcttttatttggacttaa 27551233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 7 - 288
Target Start/End: Complemental strand, 11985378 - 11985099
Alignment:
Q  7 caattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttgannnnnnnn 106  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||| ||| ||||||||| ||||||||||||||            
T  11985378 caattttcgtgagaatcgtcatcgttcatttgatttcaaatatcgtgagaattgccgttatttccagtaccacatcaggtatggtgacttgatttttctt 11985279  T
Q  107 nnnnnnnnnnnnnnncttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgat 206  Q
                   ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||  ||| |||||||||||||| |||||||    
T  11985278 tttgatttaatttttcttggttgtgatgtagttaattataacaattgagtaagtcatccgttgtactttgag-gctgctagcaggtgttgccgctgtgat 11985180  T
Q  207 gttgtgggagtttgctagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||| ||||||| |||||        | ||  ||||||||||||||||  |||||| |||||||||||| |||||||||||    
T  11985179 gttgtaggagtttactagcttttttt-gattgttgctgaaatggttatgcgatgaggcttttgttcttttatttggacttaa 11985099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 122 - 288
Target Start/End: Original strand, 31551555 - 31551722
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||| || ||||||||||||||||||||||    
T  31551555 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgatgactgctagcaggtgttcccgctgtgatgttgtgggagtttgc 31551654  T
Q  222 tagc-nnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||          ||| ||| |||||||||||||| |||||| ||||||||||||||||||||||||    
T  31551655 tagcatttttttttgttgctgttgaaatggttatgtgatgaggcttttgttcttttgtttggacttaa 31551722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 122 - 288
Target Start/End: Original strand, 27019522 - 27019688
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||  ||| |||||||||||||| |||||||||||||||||||||     
T  27019522 cttggttgtgaggtagttaattataacaattgagtaaatcatccgttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtgggagtttgt 27019621  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    || |        |||| |||||||||||||||||| |||||| |||||||||||| |||||||||||    
T  27019622 taccatttttttggttgctgctgaaatggttatgtgatgaggcttttgttcttttatttggacttaa 27019688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 122 - 288
Target Start/End: Original strand, 30130345 - 30130511
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||  ||| |||||||||||||| |||||||| |||||||||||||    
T  30130345 cttggttgtgaggtagttaattataacaattgagtaaatcatccgttgtactttgagggctgctagcaggtgttgccgctgtgatgctgtgggagtttgc 30130444  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||        |||| |||||||||||||||||| ||||| ||||||||||||| |||||| ||||    
T  30130445 tagcatttttatggttgctgctgaaatggttatgtgatgagatttttgttcttttatttggatttaa 30130511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 122 - 288
Target Start/End: Original strand, 42611654 - 42611820
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||  ||| |||||||||||||| ||||||||||||||| ||||||    
T  42611654 cttggttgtgaggtagttaattataacaattgagtaaatcatccgttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtgggtgtttgc 42611753  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    |||         |||| |||||||||||||||||| |||||| |||||||||||| |||||||||||    
T  42611754 tagtatttttttggttgctgctgaaatggttatgtgatgaggcttttgttcttttatttggacttaa 42611820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 7 - 288
Target Start/End: Original strand, 13304741 - 13305022
Alignment:
Q  7 caattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttgannnnnnnn 106  Q
    |||||||| ||||||||||||| ||||| |||||| ||||||||||||||||||  ||||||| ||| ||||| ||| ||||||||||||||            
T  13304741 caattttcctgagaatcgtcgttgttcggttgattccaaatatcgtgagaattgtcgttatttccagtaccacgtcaggtatggtgacttgatttttctt 13304840  T
Q  107 nnnnnnnnnnnnnnncttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgat 206  Q
                   |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||| |||||| ||||||| || || |    
T  13304841 tttgatttgatttttcttggttgtgaggtagttaattataacaattgagtaagtcatctattgtactttgagggctgctagcagatgttgccgctttgtt 13304940  T
Q  207 gttgtgggagtttgctagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    |||||||||||  ||||||        |||| ||| |||||||||||||| |||||| ||||||||||||||||||||||||    
T  13304941 gttgtgggagtcagctagcatatttttggttgctgttgaaatggttatgtgatgaggcttttgttcttttgtttggacttaa 13305022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 126 - 288
Target Start/End: Original strand, 9986752 - 9986915
Alignment:
Q  126 gttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgctagc 225  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||  |||||||||||||||||||||||||    
T  9986752 gttgtgatgcagttaattataacaattgagtaagtcatctgttgtactttgaggactgctagtaggtgttgccgttgtgatgttgtgggagtttgctagc 9986851  T
Q  226 -nnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
            |||||  ||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  9986852 atttttttcggttgatgctgaaatggttatgtgatgaggcttttgttcttttgtttggacttaa 9986915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 122 - 288
Target Start/End: Complemental strand, 15420967 - 15420801
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||  ||  |||||| ||||||| ||||||||||||||||||||||    
T  15420967 cttggttgtgaggtagttaattataacaattgagtaaatcatccgttgtactttgagggctactagcagctgttgccgctgtgatgttgtgggagtttgc 15420868  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||        |||| |||||||||||||||||  |||||| |||||||||||| |||||||||||    
T  15420867 tagcatttttttggttgctgctgaaatggttatgcgatgaggcttttgttcttttatttggacttaa 15420801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 122 - 288
Target Start/End: Complemental strand, 12500024 - 12499858
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||  ||| |||||||||||||| | ||||||||||||||||||||    
T  12500024 cttggttgtgaggtagttaattataacaattgactaaatcatatgttgtactttgagggctgctagcaggtgttgccgcagtgatgttgtgggagtttgc 12499925  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||         ||| |||||||||||||||||| |||| | |||||||||||| |||||||||||    
T  12499924 tagcattttttttgttgctgctgaaatggttatgtgatgatgcttttgttcttttatttggacttaa 12499858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 122 - 288
Target Start/End: Original strand, 824235 - 824400
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    ||||||||||| ||||||||||||||||||||||||| ||||| || |||||||||   ||| ||||||||||||||  |||||||||||||||||||||    
T  824235 cttggttgtgatgtagttaattataacaattgagtaaatcatccgtcgtactttgaaggctgctagcaggtgttgccgttgtgatgttgtgggagtttgc 824334  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||        |||| |||||||||||||||||| |||||| |||||||||||| |||||||||||    
T  824335 tagcatttttt-ggttgctgctgaaatggttatgtgatgaggcttttgttcttttatttggacttaa 824400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 122 - 288
Target Start/End: Complemental strand, 19665577 - 19665411
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    |||||||||||||||||||| |||||||||||||||| |||| ||||||||||| ||  ||| ||||| |||||||| ||||||| ||||||||||||||    
T  19665577 cttggttgtgaggtagttaagtataacaattgagtaaatcatttgttgtactttaagggctgctagcaagtgttgccgctgtgatattgtgggagtttgc 19665478  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||        |||| |||||||||| ||||||| |||||| |||||||||||| |||||||||||    
T  19665477 tagcatttttttggttgctgctgaaatcgttatgtgatgaggcttttgttcttttatttggacttaa 19665411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 122 - 288
Target Start/End: Original strand, 20545581 - 20545746
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    |||||||||||||||||||||||||||||||||| || ||||| |||||||||||||  ||||||||||||||||||||| ||||||||||| |||||||    
T  20545581 cttggttgtgaggtagttaattataacaattgagaaa-tcatccgttgtactttgagggctgttagcaggtgttgccactatgatgttgtggcagtttgc 20545679  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    |||         ||||  ||||||||||||||||| |||||  |||||||| ||| |||||||||||    
T  20545680 tagtatttttttggttgatgctgaaatggttatgtgatgagccttttgttcatttatttggacttaa 20545746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 8 - 288
Target Start/End: Complemental strand, 37271146 - 37270868
Alignment:
Q  8 aattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttgannnnnnnnn 107  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||   ||||||| ||  ||||| | | ||||||| ||||||             
T  37271146 aattttcgtgagaatcgtcgtcgttcgtttgattccaaatatcgtgagaattatcgttatttccaataccacgtaaggtatggtaacttgatttttcttt 37271047  T
Q  108 nnnnnnnnnnnnnncttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatg 207  Q
                  ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||| |||||||| ||||| ||||||||    
T  37271046 ttaatttgatttttcttggttgtgaggtagttaattataacaattgagtaagtcatctgctgtactttgagggctgctagcaggtattgccgctgtgatg 37270947  T
Q  208 ttgtgggagtttgctagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||||||| || |||||||         | |  ||||||||||||||||| |||| | |||||||||||| |||||||||||    
T  37270946 ttgtgggtgtctgctagcattttttttggt--tgctgaaatggttatgtgatgatgcttttgttcttttatttggacttaa 37270868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 126 - 218
Target Start/End: Original strand, 37939895 - 37939987
Alignment:
Q  126 gttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtt 218  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||||||||  ||| |||||||||||||| |||| ||||||||||||||    
T  37939895 gttgtgaggtagttaattataacaattgagtaaatcatccgttgtactttgagggctgctagcaggtgttgccgctgtaatgttgtgggagtt 37939987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 9 - 98
Target Start/End: Original strand, 9986634 - 9986723
Alignment:
Q  9 attttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||  ||||||| ||| ||||| |||||||| |||| ||||    
T  9986634 attttcgttagaatcgtcgtcgtttgtttgatttcaaatatcgtgagaattgtcgttatttccagtaccacgtcaagtatagtgatttga 9986723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 27551512 - 27551423
Alignment:
Q  8 aattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||||||||||||| | ||||||| |||||||| ||||||||||||||||||  ||||||| ||  ||||| ||||||||||||| ||||    
T  27551512 aattttcgtgagaatag-cgtcgtttgtttgattccaaatatcgtgagaattgtcgttatttccaataccacgtcaagtatggtgatttga 27551423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 98
Target Start/End: Original strand, 31551443 - 31551532
Alignment:
Q  9 attttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||||||||||||||||||| || ||||||||  |||||||||||||||||  | |||||  || ||||| ||||||||||||| ||||    
T  31551443 attttcgtgagaatcgtcgtcttttgtttgattctaaatatcgtgagaattgtcgctatttctagtaccacgtcaagtatggtgatttga 31551532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 98
Target Start/End: Complemental strand, 19665662 - 19665601
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||||||||||||||||||||||||||||||| ||| || || ||| ||||| ||||||||    
T  19665662 tgatttcaaatatcgtgagaattgctgttatttccagtacaacttcaggtatgatgacttga 19665601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 98
Target Start/End: Complemental strand, 15421052 - 15420991
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||||||||||||||||||||||  ||||||| ||| || |||||| ||||| ||||||||    
T  15421052 tgatttcaaatatcgtgagaattgtcgttatttccagtacaacatcaggtatgatgacttga 15420991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 98
Target Start/End: Original strand, 27019437 - 27019498
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||||||||||||||||||||||| ||||||| ||| || || ||| ||||| ||||||||    
T  27019437 tgatttcaaatatcgtgagaattgccgttattttcagtacaacgtcaggtatgatgacttga 27019498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 98
Target Start/End: Original strand, 744909 - 744970
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||||||||||||||||||||||| ||||||| ||| || || ||| ||| | ||||||||    
T  744909 tgatttcaaatatcgtgagaattgccgttatttccagtacaacgtcaggtaagatgacttga 744970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 98
Target Start/End: Complemental strand, 12500109 - 12500048
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||||||||||||||||||||||| |||||||  || || || ||| ||||| ||||||||    
T  12500109 tgatttcaaatatcgtgagaattgccgttatttctagtacaacgtcaggtatgatgacttga 12500048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 29390691 - 29390610
Alignment:
Q  7 caattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtat 88  Q
    ||||| ||||||||||||| | || ||||||||||||| | ||||||||||| || ||| ||| || || ||||||| ||||    
T  29390691 caattatcgtgagaatcgttgccgctcgtttgatttcagacatcgtgagaatcgccgttgtttccaaaatcacatcaggtat 29390610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 98
Target Start/End: Original strand, 30130260 - 30130321
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    |||||||||||||||||||||||||  ||| || ||| || || ||||||||| ||||||||    
T  30130260 tgatttcaaatatcgtgagaattgcctttacttccagtacaacgtcaagtatgatgacttga 30130321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 98
Target Start/End: Complemental strand, 39589142 - 39589081
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||||||||||||||||||||| | ||||||| ||| || || ||| ||||| ||||||||    
T  39589142 tgatttcaaatatcgtgagaattaccgttatttccagtacaacgtcaggtatgatgacttga 39589081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 98
Target Start/End: Original strand, 42611569 - 42611630
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    ||||||||||||||||||||||| | ||||||| ||| || || ||| ||||| ||||||||    
T  42611569 tgatttcaaatatcgtgagaattaccgttatttccagtacaacgtcaggtatgatgacttga 42611630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 69
Target Start/End: Original strand, 824147 - 824179
Alignment:
Q  37 tgatttcaaatatcgtgagaattgctgttattt 69  Q
    ||||||||||||||||||||||||| |||||||    
T  824147 tgatttcaaatatcgtgagaattgccgttattt 824179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Original strand, 824496 - 824532
Alignment:
Q  303 cgcggttttagaaacaatgacaattctcacgataatt 339  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  824496 cgcggttctagaaacaacgacaattctcacgataatt 824532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Complemental strand, 9592165 - 9592129
Alignment:
Q  303 cgcggttttagaaacaatgacaattctcacgataatt 339  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  9592165 cgcggttctagaaacaacgacaattctcacgataatt 9592129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Complemental strand, 12499765 - 12499729
Alignment:
Q  303 cgcggttttagaaacaatgacaattctcacgataatt 339  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  12499765 cgcggttctagaaacaacgacaattctcacgataatt 12499729  T

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Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Original strand, 20545839 - 20545875
Alignment:
Q  303 cgcggttttagaaacaatgacaattctcacgataatt 339  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  20545839 cgcggttctagaaacaacgacaattctcacgataatt 20545875  T

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Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Complemental strand, 39588815 - 39588779
Alignment:
Q  303 cgcggttttagaaacaatgacaattctcacgataatt 339  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  39588815 cgcggttctagaaacaacgacaattctcacgataatt 39588779  T

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Target: scaffold0075 (Bit Score: 82; Significance: 1e-38; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 123 - 288
Target Start/End: Original strand, 18704 - 18870
Alignment:
Q  123 ttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgct 222  Q
    |||||||||||||||||||||||||||||| |||| ||||| | || ||||||||| |||| ||||| |||||||| |||||||||||||||||||||||    
T  18704 ttggttgtgaggtagttaattataacaattaagtatgtcatttattttactttgaggactgctagcaagtgttgccgctgtgatgttgtgggagtttgct 18803  T
Q  223 agc-nnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    | |        ||||| || ||||||| ||||||| |||||||||||||||||||||||||||||||    
T  18804 accatttttttcggttgctactgaaattgttatgtgatgaggtttttgttcttttgtttggacttaa 18870  T

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Target: scaffold0075; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 18628 - 18692
Alignment:
Q  34 gtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    |||||||| ||||||||||||||||||  ||||||| ||| |||||  |||||||||||| ||||    
T  18628 gtttgattccaaatatcgtgagaattgtcgttatttccagcaccacgacaagtatggtgatttga 18692  T

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Target: scaffold0115 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 138 - 288
Target Start/End: Complemental strand, 21511 - 21358
Alignment:
Q  138 ttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgctagcnnnnnnncggt- 236  Q
    ||||||||||||||||||||| ||||| |||||||||||||  ||| |||||||||||||| ||||||||||||||||||||||||||        |||     
T  21511 ttaattataacaattgagtaaatcatccgttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtgggagtttgctagcatttttttggtt 21412  T
Q  237 --tactgctgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
      | |||||||||||||||||| |||||| |||||||||||| |||||||||||    
T  21411 gctgctgctgaaatggttatgtgatgaggcttttgttcttttatttggacttaa 21358  T

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Target: scaffold0115; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Complemental strand, 21265 - 21229
Alignment:
Q  303 cgcggttttagaaacaatgacaattctcacgataatt 339  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  21265 cgcggttctagaaacaacgacaattctcacgataatt 21229  T

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Target: scaffold0208 (Bit Score: 61; Significance: 4e-26; HSPs: 2)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 122 - 198
Target Start/End: Original strand, 5226 - 5302
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgcc 198  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| |||| ||||||||||||||    
T  5226 cttggttgtgaggtagttaattataacaattgagtaaatcatttgttgtactttgaggactgctagcaggtgttgcc 5302  T

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Target: scaffold0208; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 5113 - 5194
Alignment:
Q  9 attttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtgagaattgctgttatttacagaaccacatcaagtatgg 90  Q
    |||||| ||||||||||||||||| |||||||| ||||||||||||||||||  ||||||| ||| ||||| ||||||||||    
T  5113 attttcatgagaatcgtcgtcgtttgtttgattccaaatatcgtgagaattgtcgttatttccagtaccacgtcaagtatgg 5194  T

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Target: scaffold0259 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 144 - 288
Target Start/End: Original strand, 5497 - 5642
Alignment:
Q  144 ataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgctagc-nnnnnnncggttactgc 242  Q
    ||||||||||||||||||||| ||||||||||||| |||| |||||||||||||| ||  |||||| |||||||| ||||||         ||||  |||    
T  5497 ataacaattgagtaagtcatccgttgtactttgaggactggtagcaggtgttgccgcttcgatgttttgggagttcgctagcattttttttggttgatgc 5596  T
Q  243 tgaaatggttatgtcatgaggtttttgttcttttgtttggacttaa 288  Q
    ||| |  |||||||||||||| |||||||||||| |||||||||||    
T  5597 tgagagagttatgtcatgaggcttttgttcttttctttggacttaa 5642  T

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Target: scaffold0259; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 5254 - 5347
Alignment:
Q  7 caattttcgtgagaatcgtcgtcgttcgtttgatttcaaatatcgtga--gaattgctgttatttacagaaccacatcaagtatggtgacttga 98  Q
    |||||||||||||||| |||||| |||||||| || |||||||| | |  ||||| | ||||||| || |||||| ||| ||||||||||||||    
T  5254 caattttcgtgagaattgtcgtcattcgtttgcttccaaatatcatcaaggaatttccgttatttccataaccacgtcaggtatggtgacttga 5347  T

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Target: scaffold0003 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 122 - 281
Target Start/End: Original strand, 46842 - 46990
Alignment:
Q  122 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgccactgtgatgttgtgggagtttgc 221  Q
    |||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||  ||| ||| ||||||           ||||||||||||||||    
T  46842 cttggttgtgaggtagttaattataacaattgggtaaatcatccgttgtactttgagggctgctagtaggtgt-----------tgttgtgggagtttgc 46930  T
Q  222 tagcnnnnnnncggttactgctgaaatggttatgtcatgaggtttttgttcttttgtttg 281  Q
    ||||        |||| |||||||||||||||||| |||||| |||||||||||| ||||    
T  46931 tagcatttttttggttgctgctgaaatggttatgtgatgaggcttttgttcttttatttg 46990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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