View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4091_low_33 (Length: 317)
Name: NF4091_low_33
Description: NF4091
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4091_low_33 |
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Alignment Details
Target: chr2 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 76 - 302
Target Start/End: Complemental strand, 3988144 - 3987918
Alignment:
| Q |
76 |
attaattagatctatgtcttgacgttgtataattcattttaatttaaatttgggtgtagatgaaggaggaagtggtcagttaatgagaaatacgtcgttg |
175 |
Q |
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| T |
3988144 |
attaattagatctatgtcttgacgttgtataattcattttaatttgaatttgggtgtagatgaaggaggaagtggtcagttaatgagaaatacgtcgttg |
3988045 |
T |
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| Q |
176 |
ccttcgacaccgacaacgcctgtgactccgacgacacctcaatcggcacggaaagttgacaacgtttggaggagcgtgttcaatcctgggagtaactctg |
275 |
Q |
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| T |
3988044 |
ccttcgacaccgacaacacctgtgactccgacgacacctcaatcggcacggaaagttgacaacgtttggaggagcgtgttcaatcctgggagtaactctg |
3987945 |
T |
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| Q |
276 |
ctaccaagacaattggtgctgataagt |
302 |
Q |
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||||||||||||||||||||||||||| |
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| T |
3987944 |
ctaccaagacaattggtgctgataagt |
3987918 |
T |
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