View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4091_low_39 (Length: 293)
Name: NF4091_low_39
Description: NF4091
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4091_low_39 |
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Alignment Details
Target: chr7 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 19 - 273
Target Start/End: Complemental strand, 38983560 - 38983306
Alignment:
| Q |
19 |
cattggatgtgttagaagcatgtttctttccattcaaatcagtcctaattttcattctagcaggcacttcagtattgtttgtgtgattaagttatgtccc |
118 |
Q |
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| T |
38983560 |
cattggatgtgttagaagcatgtttctttccattcaaatcagtcctagttttcattctagcaggcacttcagtattgtttgtgtgattaagctatgtcct |
38983461 |
T |
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| Q |
119 |
aaggttttgtaattagcacagaaggaaggatgcttatcataaaagacatcaatggacagagcgtgatcttccctttccacaacaacagtttcaaagagct |
218 |
Q |
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| T |
38983460 |
aaggttttgcaattagcacagaaggaaggatgcttctcataaaagacatcaatggacagagcatgatcttccctttccacaacaacagtttcaaagagct |
38983361 |
T |
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| Q |
219 |
gctcagataggtccacatccacaagaactctggaaaaaattccaaaacatctgct |
273 |
Q |
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|||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |
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| T |
38983360 |
gctcagataggtccacatccacaagaactctggaaaaaatcccaaaacgtctgct |
38983306 |
T |
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