View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4091_low_41 (Length: 280)
Name: NF4091_low_41
Description: NF4091
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4091_low_41 |
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Alignment Details
Target: chr2 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 1 - 264
Target Start/End: Complemental strand, 43474727 - 43474464
Alignment:
| Q |
1 |
tatatacttttagctgctcttgcccattacgtgagacctataaaaatggtggataatttactcaaatcacgtaagaaatttgtaagtggtatcaacaaac |
100 |
Q |
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| T |
43474727 |
tatatacttttagctgctcttgcccattacgtgagacctataaaaatggtgggtaatttactcaaaccacgtaagaaatttgtaagtggtattaacaaac |
43474628 |
T |
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| Q |
101 |
taaattcattctattaacaaatttacttgtatgattaattttcatcaaacgttggataaattaaccacaattcttccaagattaacctataaaaaactat |
200 |
Q |
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| T |
43474627 |
taaattcattctattaacaaatttacttgtatgattaattttcatcaatcgtcggataaattaaccacaattcttccaagattaacctataaaaaactat |
43474528 |
T |
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| Q |
201 |
tttgttattttgcacaacatttggtattattatgtgtttgaggagattttgaaagatttagctg |
264 |
Q |
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| T |
43474527 |
tttgttattttgcacaacatttggtattattatgtgtttgcggagattttgaaagatttagctg |
43474464 |
T |
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