View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4092_high_2 (Length: 280)

Name: NF4092_high_2
Description: NF4092
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4092_high_2
NF4092_high_2
[»] chr4 (46 HSPs)
chr4 (5-90)||(8758862-8758947)
chr4 (1-78)||(1290219-1290296)
chr4 (5-79)||(12129625-12129699)
chr4 (1-78)||(1963199-1963276)
chr4 (5-78)||(49308052-49308124)
chr4 (6-78)||(10471414-10471486)
chr4 (4-78)||(19750599-19750672)
chr4 (4-78)||(19789134-19789207)
chr4 (6-78)||(25685848-25685920)
chr4 (6-85)||(10470542-10470621)
chr4 (5-76)||(31599794-31599865)
chr4 (5-79)||(35935558-35935632)
chr4 (5-80)||(8155739-8155813)
chr4 (5-78)||(17382996-17383068)
chr4 (5-78)||(17388236-17388308)
chr4 (5-78)||(26421647-26421719)
chr4 (5-78)||(31601010-31601083)
chr4 (6-78)||(25684937-25685009)
chr4 (6-78)||(48780251-48780323)
chr4 (1-82)||(1289096-1289177)
chr4 (5-78)||(1835127-1835200)
chr4 (5-78)||(1964466-1964539)
chr4 (5-78)||(8757678-8757750)
chr4 (6-78)||(13386017-13386090)
chr4 (6-83)||(48781072-48781148)
chr4 (5-78)||(52491632-52491705)
chr4 (6-78)||(5526152-5526223)
chr4 (4-78)||(10447009-10447084)
chr4 (6-83)||(13386558-13386636)
chr4 (5-83)||(21539096-21539174)
chr4 (5-78)||(1834122-1834195)
chr4 (6-83)||(5525358-5525434)
chr4 (5-83)||(3928883-3928961)
chr4 (5-78)||(13509384-13509456)
chr4 (6-83)||(14868888-14868964)
chr4 (6-83)||(14876970-14877046)
chr4 (5-82)||(37728590-37728666)
chr4 (5-78)||(49306778-49306850)
chr4 (5-82)||(55603556-55603632)
chr4 (21-78)||(35934347-35934402)
chr4 (5-78)||(10448285-10448358)
chr4 (5-78)||(50909698-50909771)
chr4 (3-51)||(26420345-26420392)
chr4 (5-49)||(33310114-33310158)
chr4 (5-49)||(46637713-46637757)
chr4 (3-79)||(55602378-55602453)
[»] chr2 (34 HSPs)
chr2 (5-78)||(36449781-36449854)
chr2 (1-78)||(38840514-38840591)
chr2 (1-78)||(7899903-7899980)
chr2 (5-78)||(18904370-18904443)
chr2 (1-78)||(18906008-18906085)
chr2 (2-78)||(23869557-23869632)
chr2 (6-82)||(36450947-36451022)
chr2 (5-84)||(22848188-22848267)
chr2 (4-78)||(41879236-41879310)
chr2 (5-82)||(7898690-7898767)
chr2 (3-83)||(11258834-11258914)
chr2 (6-78)||(1034495-1034567)
chr2 (5-85)||(22587979-22588058)
chr2 (5-83)||(13567970-13568048)
chr2 (5-78)||(18299376-18299449)
chr2 (5-78)||(18868927-18869000)
chr2 (5-78)||(38839245-38839318)
chr2 (5-83)||(802616-802693)
chr2 (5-78)||(13030295-13030365)
chr2 (5-78)||(18300749-18300820)
chr2 (5-78)||(41878095-41878170)
chr2 (15-78)||(11938823-11938886)
chr2 (5-78)||(18797249-18797323)
chr2 (5-57)||(32739647-32739699)
chr2 (5-75)||(24476869-24476937)
chr2 (5-51)||(810806-810852)
chr2 (5-83)||(13570582-13570660)
chr2 (5-78)||(16446157-16446230)
chr2 (23-83)||(21837298-21837356)
chr2 (5-57)||(24475248-24475300)
chr2 (5-57)||(28617946-28617998)
chr2 (1-78)||(26544152-26544228)
chr2 (6-78)||(1033214-1033284)
chr2 (8-92)||(5819741-5819824)
[»] chr5 (32 HSPs)
chr5 (5-87)||(25523063-25523145)
chr5 (5-78)||(22940647-22940720)
chr5 (5-83)||(19752910-19752987)
chr5 (5-82)||(20216788-20216865)
chr5 (5-83)||(24332911-24332989)
chr5 (1-78)||(16650876-16650953)
chr5 (1-78)||(28538679-28538756)
chr5 (6-78)||(5730444-5730517)
chr5 (5-78)||(18486927-18487000)
chr5 (5-78)||(33160311-33160384)
chr5 (5-85)||(36486513-36486593)
chr5 (5-84)||(33158095-33158174)
chr5 (5-83)||(28539845-28539922)
chr5 (5-78)||(1796057-1796130)
chr5 (5-78)||(20214199-20214271)
chr5 (6-78)||(5778862-5778934)
chr5 (5-68)||(19754155-19754217)
chr5 (7-57)||(34893689-34893739)
chr5 (5-78)||(18154497-18154569)
chr5 (5-78)||(25056406-25056479)
chr5 (5-78)||(40255697-40255770)
chr5 (1-64)||(7311607-7311670)
chr5 (5-83)||(18485136-18485214)
chr5 (5-78)||(25524152-25524226)
chr5 (6-78)||(5777904-5777974)
chr5 (5-79)||(42195136-42195208)
chr5 (2-81)||(38834087-38834165)
chr5 (5-51)||(2685774-2685820)
chr5 (1-51)||(5962593-5962643)
chr5 (4-73)||(1015492-1015561)
chr5 (5-78)||(36485303-36485376)
chr5 (5-49)||(1797322-1797366)
[»] chr1 (42 HSPs)
chr1 (3-84)||(24426098-24426179)
chr1 (5-78)||(24422803-24422876)
chr1 (5-85)||(37526902-37526982)
chr1 (5-84)||(52274965-52275044)
chr1 (5-83)||(39153141-39153219)
chr1 (5-78)||(11437224-11437297)
chr1 (5-78)||(23980491-23980564)
chr1 (5-82)||(45149996-45150072)
chr1 (6-82)||(52828096-52828172)
chr1 (1-78)||(39222494-39222572)
chr1 (5-78)||(14999288-14999360)
chr1 (5-82)||(39151930-39152007)
chr1 (1-82)||(43058785-43058865)
chr1 (5-78)||(45148584-45148656)
chr1 (5-78)||(51684369-51684442)
chr1 (6-83)||(52827345-52827422)
chr1 (4-83)||(36612851-36612929)
chr1 (3-82)||(50680331-50680409)
chr1 (5-83)||(11436040-11436118)
chr1 (5-83)||(39698561-39698639)
chr1 (5-83)||(45157234-45157311)
chr1 (8-78)||(50681632-50681702)
chr1 (5-78)||(35067027-35067100)
chr1 (5-78)||(36613929-36614002)
chr1 (5-78)||(39699792-39699864)
chr1 (5-83)||(35594215-35594292)
chr1 (5-78)||(7674531-7674602)
chr1 (5-78)||(51685790-51685863)
chr1 (6-78)||(41364832-41364903)
chr1 (3-82)||(52276186-52276265)
chr1 (5-83)||(33088642-33088720)
chr1 (5-83)||(43378738-43378815)
chr1 (5-83)||(44404440-44404518)
chr1 (5-78)||(11190388-11190461)
chr1 (4-79)||(45156051-45156126)
chr1 (5-82)||(7983049-7983125)
chr1 (6-83)||(41366156-41366233)
chr1 (5-78)||(43060031-43060104)
chr1 (1-76)||(46066530-46066603)
chr1 (8-83)||(14999983-15000058)
chr1 (4-46)||(44411990-44412032)
chr1 (35-83)||(39221356-39221405)
[»] chr3 (45 HSPs)
chr3 (5-83)||(54540815-54540893)
chr3 (5-82)||(7267643-7267719)
chr3 (5-78)||(7758405-7758478)
chr3 (5-85)||(29932724-29932803)
chr3 (5-85)||(29981878-29981957)
chr3 (5-78)||(19984852-19984925)
chr3 (6-82)||(47610606-47610682)
chr3 (5-85)||(55192020-55192099)
chr3 (5-84)||(54539752-54539831)
chr3 (5-78)||(12700178-12700249)
chr3 (5-82)||(7268852-7268928)
chr3 (5-78)||(29931229-29931302)
chr3 (5-78)||(29980383-29980456)
chr3 (5-77)||(24516464-24516536)
chr3 (23-78)||(47615591-47615646)
chr3 (5-78)||(22776837-22776910)
chr3 (6-78)||(47609700-47609772)
chr3 (6-78)||(51469975-51470047)
chr3 (3-78)||(46719944-46720019)
chr3 (5-83)||(12703525-12703602)
chr3 (5-78)||(534502-534575)
chr3 (5-78)||(8456481-8456553)
chr3 (5-78)||(47614188-47614261)
chr3 (5-78)||(51038815-51038888)
chr3 (5-78)||(52840629-52840702)
chr3 (6-78)||(5001203-5001275)
chr3 (5-78)||(19986095-19986170)
chr3 (5-78)||(5029708-5029780)
chr3 (5-62)||(34019170-34019227)
chr3 (1-78)||(51037539-51037615)
chr3 (1-81)||(23770428-23770508)
chr3 (3-83)||(46721243-46721323)
chr3 (4-51)||(31645003-31645050)
chr3 (7-78)||(49216250-49216321)
chr3 (8-78)||(53901416-53901484)
chr3 (5-78)||(535807-535880)
chr3 (1-78)||(53616037-53616114)
chr3 (4-72)||(6170281-6170349)
chr3 (10-78)||(11671371-11671438)
chr3 (6-78)||(51470481-51470552)
chr3 (5-78)||(40426803-40426877)
chr3 (4-57)||(6249633-6249686)
chr3 (5-78)||(8875909-8875982)
chr3 (5-85)||(54987032-54987110)
chr3 (5-83)||(52104479-52104553)
[»] scaffold0302 (2 HSPs)
scaffold0302 (5-78)||(17473-17546)
scaffold0302 (5-78)||(18801-18874)
[»] chr7 (30 HSPs)
chr7 (1-78)||(22630473-22630550)
chr7 (5-85)||(11662576-11662656)
chr7 (5-78)||(18371427-18371500)
chr7 (6-78)||(3227620-3227692)
chr7 (9-83)||(20163585-20163659)
chr7 (5-78)||(11658382-11658455)
chr7 (1-82)||(42886307-42886388)
chr7 (6-78)||(17781664-17781736)
chr7 (6-78)||(17782579-17782651)
chr7 (5-78)||(31659625-31659699)
chr7 (6-83)||(128627-128704)
chr7 (5-78)||(7501877-7501950)
chr7 (6-78)||(127340-127411)
chr7 (6-78)||(31949325-31949397)
chr7 (6-78)||(31949828-31949900)
chr7 (5-68)||(18372482-18372544)
chr7 (7-74)||(47524532-47524599)
chr7 (6-78)||(3227111-3227182)
chr7 (6-78)||(47525393-47525465)
chr7 (7-78)||(34174010-34174080)
chr7 (5-78)||(22629486-22629562)
chr7 (5-78)||(48934928-48935001)
chr7 (5-76)||(14999180-14999249)
chr7 (33-83)||(7500453-7500502)
chr7 (5-78)||(21505419-21505490)
chr7 (4-51)||(34351522-34351569)
chr7 (5-83)||(47369779-47369857)
chr7 (5-78)||(769416-769489)
chr7 (31-83)||(5111440-5111492)
chr7 (3-83)||(31661032-31661112)
[»] chr6 (27 HSPs)
chr6 (5-78)||(16704522-16704595)
chr6 (6-78)||(8659268-8659340)
chr6 (6-78)||(8821876-8821948)
chr6 (24-78)||(7316338-7316392)
chr6 (5-81)||(1829628-1829704)
chr6 (6-78)||(8822819-8822891)
chr6 (3-78)||(6842306-6842381)
chr6 (5-78)||(10784595-10784669)
chr6 (5-75)||(14822366-14822436)
chr6 (14-83)||(3721610-3721679)
chr6 (5-78)||(7314883-7314955)
chr6 (6-83)||(8660230-8660306)
chr6 (5-78)||(27322093-27322165)
chr6 (6-78)||(3722533-3722605)
chr6 (1-78)||(16703573-16703647)
chr6 (5-83)||(29473075-29473153)
chr6 (5-78)||(27437831-27437904)
chr6 (33-82)||(34834632-34834681)
chr6 (5-80)||(5658757-5658832)
chr6 (5-78)||(14823600-14823674)
chr6 (33-78)||(26717137-26717182)
chr6 (4-68)||(10785937-10786000)
chr6 (5-57)||(26575079-26575131)
chr6 (6-78)||(27318318-27318389)
chr6 (4-83)||(3333050-3333129)
chr6 (5-76)||(6840199-6840268)
chr6 (10-78)||(26574622-26574690)
[»] chr8 (42 HSPs)
chr8 (7-85)||(29968364-29968441)
chr8 (5-78)||(10007788-10007861)
chr8 (5-85)||(12351917-12351997)
chr8 (4-83)||(30335637-30335716)
chr8 (1-83)||(40471168-40471249)
chr8 (5-78)||(5513985-5514057)
chr8 (5-78)||(18979145-18979218)
chr8 (5-76)||(1824103-1824174)
chr8 (5-76)||(1858548-1858619)
chr8 (3-82)||(8389712-8389791)
chr8 (16-83)||(12353396-12353462)
chr8 (169-276)||(19990429-19990536)
chr8 (5-83)||(22221389-22221467)
chr8 (5-83)||(22227731-22227809)
chr8 (6-83)||(1823550-1823627)
chr8 (6-83)||(1857995-1858072)
chr8 (5-78)||(10006347-10006420)
chr8 (5-72)||(18970920-18970986)
chr8 (5-72)||(18978029-18978095)
chr8 (5-83)||(32207350-32207426)
chr8 (5-76)||(45114541-45114612)
chr8 (5-82)||(11282007-11282084)
chr8 (5-78)||(11287779-11287852)
chr8 (145-248)||(15756555-15756658)
chr8 (3-78)||(24122886-24122960)
chr8 (4-78)||(30336525-30336599)
chr8 (5-78)||(22220391-22220464)
chr8 (31-78)||(36249555-36249602)
chr8 (1-63)||(24123919-24123981)
chr8 (24-78)||(24483146-24483200)
chr8 (5-78)||(29043401-29043474)
chr8 (5-85)||(43661848-43661928)
chr8 (5-83)||(8388462-8388538)
chr8 (5-64)||(24488704-24488763)
chr8 (5-83)||(38980069-38980147)
chr8 (5-83)||(39011166-39011244)
chr8 (5-78)||(11283234-11283307)
chr8 (25-78)||(11456641-11456694)
chr8 (5-78)||(32968459-32968532)
chr8 (5-78)||(38974798-38974871)
chr8 (5-78)||(39005896-39005969)
chr8 (34-78)||(11288914-11288958)
[»] scaffold0320 (1 HSPs)
scaffold0320 (5-78)||(19491-19564)
[»] scaffold0294 (2 HSPs)
scaffold0294 (5-78)||(5463-5536)
scaffold0294 (4-78)||(4445-4519)
[»] scaffold0019 (2 HSPs)
scaffold0019 (5-78)||(61484-61557)
scaffold0019 (5-78)||(60093-60166)
[»] scaffold2034 (1 HSPs)
scaffold2034 (5-78)||(236-309)
[»] scaffold0384 (1 HSPs)
scaffold0384 (169-276)||(1950-2057)
[»] scaffold0586 (1 HSPs)
scaffold0586 (5-82)||(6342-6419)
[»] scaffold0045 (1 HSPs)
scaffold0045 (5-78)||(49109-49182)
[»] scaffold0632 (1 HSPs)
scaffold0632 (5-78)||(3333-3405)
[»] scaffold0003 (1 HSPs)
scaffold0003 (5-78)||(49458-49531)
[»] scaffold0186 (2 HSPs)
scaffold0186 (8-78)||(23084-23152)
scaffold0186 (24-78)||(23934-23988)
[»] scaffold0093 (2 HSPs)
scaffold0093 (5-78)||(2490-2562)
scaffold0093 (5-78)||(7113-7185)
[»] scaffold1303 (1 HSPs)
scaffold1303 (5-78)||(1442-1515)
[»] scaffold0059 (2 HSPs)
scaffold0059 (5-78)||(4755-4827)
scaffold0059 (3-57)||(3699-3753)
[»] scaffold0321 (1 HSPs)
scaffold0321 (5-78)||(18731-18804)
[»] scaffold0227 (1 HSPs)
scaffold0227 (5-78)||(144-217)
[»] scaffold0112 (1 HSPs)
scaffold0112 (5-49)||(37179-37223)


Alignment Details
Target: chr4 (Bit Score: 66; Significance: 3e-29; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 5 - 90
Target Start/End: Original strand, 8758862 - 8758947
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaaccttaacatta 90  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||    
T  8758862 aaaattgtagtttctgtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcattttaaccttaaaatta 8758947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 1290219 - 1290296
Alignment:
Q  1 ggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||||||||||||||||||||| | |||||||||||||| |||||| ||||||||||||||||||||||||||    
T  1290219 ggctaaaattgtagtttttgtacttagagggccaaaattgcaagattttgaaagttaaggggggaaaagtgcacttta 1290296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 5 - 79
Target Start/End: Complemental strand, 12129699 - 12129625
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaa 79  Q
    |||||||||||||||||||||| || ||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  12129699 aaaattgtagtttttgtacttacggggccaaaattgcaagtttttgaaagttaagaggggaaaagtgcactttaa 12129625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 1963276 - 1963199
Alignment:
Q  1 ggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||||||||||||||||| ||||  ||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  1963276 ggctaaaattgtagtttttgtacataggaggccaaaattgcaactttttgaaagttaaggggggaaaagtgcacttta 1963199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 49308052 - 49308124
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||    
T  49308052 aaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcacttta 49308124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 6 - 78
Target Start/End: Original strand, 10471414 - 10471486
Alignment:
Q  6 aaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||| ||||| |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  10471414 aaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcacttta 10471486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 19750599 - 19750672
Alignment:
Q  4 taaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| | |||| |||||||||||||||||||||    
T  19750599 taaaattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagtt-aggggggaaaagtgcacttta 19750672  T

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Target: chr4; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 19789207 - 19789134
Alignment:
Q  4 taaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| | |||| |||||||||||||||||||||    
T  19789207 taaaattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagtt-aggggggaaaagtgcacttta 19789134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 78
Target Start/End: Original strand, 25685848 - 25685920
Alignment:
Q  6 aaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||| ||||| |||||||||| ||||||||||||||||||||| |||||  |||||||||||||||||||    
T  25685848 aaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcacttta 25685920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 10470621 - 10470542
Alignment:
Q  6 aaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaaccttaa 85  Q
    |||||||  |||| |||||||| | | ||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  10470621 aaattgtgattttggtacttagagggtcaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagccttaa 10470542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 31599865 - 31599794
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactt 76  Q
    ||||||||||||||||||||||||| | ||||||||||||||||| | ||||| ||||| ||||||||||||    
T  31599865 aaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaaagtgcactt 31599794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 35935558 - 35935632
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaa 79  Q
    ||||||||||||| ||||||||||| || |||||||||| ||||| | |||||||||||| ||||||||||||||    
T  35935558 aaaattgtagtttatgtacttagggggctaaaattgcaaatttttaaaagttaagggggggaaagtgcactttaa 35935632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 8155813 - 8155739
Alignment:
Q  5 aaaattgtagtttttgtacttaggg-agccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaac 80  Q
    |||||||||||||||| |||||||| ||| |||||||||||||||||| |||||  |||||||||||||||||||||    
T  8155813 aaaattgtagtttttgaacttaggggagctaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttaac 8155739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 17383068 - 17382996
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    |||||||||||||||||||||| ||  |||||||||||||||||||| |||| ||||| |||||||||||||||    
T  17383068 aaaattgtagtttttgtacttaagggaccaaaattgcaagtttttgaaagtt-aggggagaaaagtgcacttta 17382996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 17388236 - 17388308
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||||||| |||||||| ||  |||||||||||||||||||| |||| |||||||||||||||||||||    
T  17388236 aaaattgtagtttatgtacttaagggaccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcacttta 17388308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 26421647 - 26421719
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||||||||||||||||||  | ||||||||||||||||||| |||| || ||||||||||||||||||    
T  26421647 aaaattgtagtttttgtacttaggaggtcaaaattgcaagtttttgaaagtt-agaggggaaaagtgcacttta 26421719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 31601010 - 31601083
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||||||||||||||||||| | ||||||||||||||||| | |||||  |||| ||||||||||||||    
T  31601010 aaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttagaggggaaaaagtgcacttta 31601083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 25685009 - 25684937
Alignment:
Q  6 aaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||| ||||| |||||||| | | ||||||||||||||||||| ||||| ||||||||||||||||||||    
T  25685009 aaattgtggttttggtacttagagggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcacttta 25684937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 48780323 - 48780251
Alignment:
Q  6 aaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||| ||||| |||||||||| | ||||||||||||||||| | ||||| ||||||||||||||||||||    
T  48780323 aaattgtggttttggtacttagggggtcaaaattgcaagtttttaaaagttagggggggaaaagtgcacttta 48780251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 1289177 - 1289096
Alignment:
Q  1 ggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacct 82  Q
    ||||||||||||||||||| ||||||| |   ||||||| ||| | ||||| |||||||||||||||||| |||||||||||    
T  1289177 ggctaaaattgtagtttttatacttagaggatcaaaattacaaatatttgaaagttaaggggggaaaagttcactttaacct 1289096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 1835127 - 1835200
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||||||||  ||||||||| | ||||||||||||||||||| ||||| ||  ||||||||||||||||    
T  1835127 aaaattgtagttttaatacttagggggtcaaaattgcaagtttttgaaagttagggatggaaaagtgcacttta 1835200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 1964466 - 1964539
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||||||||||| | ||||| |||||||||| || ||||| | ||||||||| ||||||||||||||||    
T  1964466 aaaattgtagtttttgttcatagggggccaaaattgtaactttttaaaagttaagggtggaaaagtgcacttta 1964539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 8757750 - 8757678
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||||||| ||||||||||| || ||||||| |||||||||| |||||| |||| ||||||||||||||    
T  8757750 aaaattgtagtttctgtacttagggggctaaaattgtaagtttttgaaagttaa-ggggaaaaagtgcacttta 8757678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 13386090 - 13386017
Alignment:
Q  6 aaattgtagtttttgtacttagggagccaaaattgcaagt-ttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||| ||||| |||||||||| ||||||||||||||| |||||| |||||  |||||||||||||||||||    
T  13386090 aaattgtggttttggtacttagggggccaaaattgcaagttttttgaaagttagagggggaaaagtgcacttta 13386017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 48781072 - 48781148
Alignment:
Q  6 aaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 83  Q
    ||||||| ||||| ||||||||||| |||||||||||| ||||||| |||||  ||||||||||||||||||| ||||    
T  48781072 aaattgtggttttagtacttaggga-ccaaaattgcaaatttttgaaagttagagggggaaaagtgcactttagcctt 48781148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 52491632 - 52491705
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||||||| |||| |||| |  |||||||||||||||||||| ||||||||| |||||||| |||||||    
T  52491632 aaaattgtagtttctgtatttagaggaccaaaattgcaagtttttgaaagttaagggtggaaaagtacacttta 52491705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 78
Target Start/End: Original strand, 5526152 - 5526223
Alignment:
Q  6 aaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||| |||||  ||||||||| ||||||||||||||||||||| |||| || ||||||||||||||||||    
T  5526152 aaattgtggttttgttacttagggggccaaaattgcaagtttttgaaagtt-agaggggaaaagtgcacttta 5526223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 10447084 - 10447009
Alignment:
Q  4 taaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaag-gggggaaaagtgcacttta 78  Q
    ||||||||| |||||||||| ||||| || |||||||||| ||||||| | ||||| |||||||||||||||||||    
T  10447084 taaaattgtggtttttgtacatagggggctaaaattgcaactttttgaaacttaagagggggaaaagtgcacttta 10447009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 13386558 - 13386636
Alignment:
Q  6 aaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaagggggg-aaaagtgcactttaacctt 83  Q
    ||||||| ||||| ||||||| || | ||||||||||||||||||| ||||| |||||| |||||||||||||| ||||    
T  13386558 aaattgtggttttggtacttatggggtcaaaattgcaagtttttgaaagttagggggggaaaaagtgcactttagcctt 13386636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 83
Target Start/End: Original strand, 21539096 - 21539174
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 83  Q
    |||||||||||||||  |||||||  ||||||||||||||||||| | | ||||||| |||||||||  ||||||||||    
T  21539096 aaaattgtagtttttacacttaggaggccaaaattgcaagtttttaaaaattaagggtggaaaagtgtgctttaacctt 21539174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 1834195 - 1834122
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||||||||| ||| ||||| | |||||||| |||||||| | |||||  |||||||||||||||||||    
T  1834195 aaaattgtagtttttatacatagggggtcaaaattgtaagttttttaaagttagagggggaaaagtgcacttta 1834122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 5525434 - 5525358
Alignment:
Q  6 aaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 83  Q
    ||||||| ||||| |||||||||| | ||||||||||||||||||| |||| ||||||||||| || |||||| ||||    
T  5525434 aaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagtt-aggggggaaaaatgtactttagcctt 5525358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 83
Target Start/End: Original strand, 3928883 - 3928961
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 83  Q
    |||||||| |||||  ||| ||||| |||||||| ||||  |||||| ||||| |||||||||||||||||||| ||||    
T  3928883 aaaattgtggttttcatacatagggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagcctt 3928961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 13509384 - 13509456
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||||||||  ||||| ||| ||||||||||||| ||||| | |||| ||||||||||||| |||||||    
T  13509384 aaaattgtagttttcatacttggggggccaaaattgcaattttttaaaagtt-aggggggaaaagtacacttta 13509456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 14868964 - 14868888
Alignment:
Q  6 aaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 83  Q
    ||||||| |||||  ||||||| | |||||||||||||| |||||| || || |||||||||||||||||||| ||||    
T  14868964 aaattgtggttttgatacttagcgggccaaaattgcaagattttgaaagata-ggggggaaaagtgcactttagcctt 14868888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 14876970 - 14877046
Alignment:
Q  6 aaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 83  Q
    ||||||| |||||  ||||||| | |||||||||||||| |||||| || | ||||||||||||||||||||| ||||    
T  14876970 aaattgtggttttgatacttagcgggccaaaattgcaagattttgaaagat-aggggggaaaagtgcactttagcctt 14877046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 82
Target Start/End: Original strand, 37728590 - 37728666
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacct 82  Q
    ||||||||||||||||||| ||||  ||||||||||||| ||||| | |||| ||| || |||| |||||||||||||    
T  37728590 aaaattgtagtttttgtacataggaggccaaaattgcaactttttaaaagtt-aggaggaaaaaatgcactttaacct 37728666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 49306850 - 49306778
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||||||||||||||||    ||||||||||||||||||||| ||||  ||||  ||||||||||||||    
T  49306850 aaaattgtagtttttgtacttaaatggccaaaattgcaagtttttgaaagtt-gggggaaaaaagtgcacttta 49306778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 82
Target Start/End: Original strand, 55603556 - 55603632
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacct 82  Q
    ||||| |||||||||||||  ||||    |||||||||||||||||| |||||| |||| ||||||||||||||||||    
T  55603556 aaaatagtagtttttgtacacaggggattaaaattgcaagtttttgaaagttaa-ggggaaaaagtgcactttaacct 55603632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 35934402 - 35934347
Alignment:
Q  21 tacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    |||||||||  |||||||| ||||||||||| |||||  |||||||||||||||||||    
T  35934402 tacttaggggaccaaaattacaagtttttgaaagtta--gggggaaaagtgcacttta 35934347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 10448285 - 10448358
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||||||||||||| ||||| || ||||| |||| ||||||| | ||| ||| ||  ||||||||||||    
T  10448285 aaaattgtagtttttgtacatagggggctaaaatcgcaactttttgaaacttaggggaggggaagtgcacttta 10448358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 50909698 - 50909771
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||||||||| ||| ||||||| |||||| |||| ||||| | | ||| || || ||||||||||||||    
T  50909698 aaaattgtagtttttatacatagggagtcaaaatcgcaactttttaaaacttagggtggaaaaagtgcacttta 50909771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 26420392 - 26420345
Alignment:
Q  3 ctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttga 51  Q
    |||||||| || ||||| |||||||||| ||||||||||||||||||||    
T  26420392 ctaaaattataatttttatacttaggga-ccaaaattgcaagtttttga 26420345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 33310114 - 33310158
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagttttt 49  Q
    |||||| ||||||||||| ||||||||| |||||| |||||||||    
T  33310114 aaaattatagtttttgtatttagggagctaaaattacaagttttt 33310158  T

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Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 46637757 - 46637713
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagttttt 49  Q
    ||||||||||||||||||| |||||||| |||||  |||||||||    
T  46637757 aaaattgtagtttttgtacatagggagctaaaatcacaagttttt 46637713  T

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Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 55602453 - 55602378
Alignment:
Q  3 ctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaa 79  Q
    ||||||||||||||||| ||  ||| |  | |||||||||||||||||| ||||||  |||||||| ||||||||||    
T  55602453 ctaaaattgtagtttttatatatagaggactaaaattgcaagtttttgaaagttaa-aggggaaaaatgcactttaa 55602378  T

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Target: chr2 (Bit Score: 66; Significance: 3e-29; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 36449854 - 36449781
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  36449854 aaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcacttta 36449781  T

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Target: chr2; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 38840514 - 38840591
Alignment:
Q  1 ggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||| ||||||||||||||||||||||||||    
T  38840514 ggctaaaattgtagtttttgtacttagggggctaaaattgcaagtttttgaaagttaaggggggaaaagtgcacttta 38840591  T

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Target: chr2; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 7899903 - 7899980
Alignment:
Q  1 ggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||||||||||| |||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||    
T  7899903 ggctaaaattgtagtttctgtacttaggggaccaaaattgcaagtttttgaaagttaaggggggaaaagtgcacttta 7899980  T

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Target: chr2; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 18904443 - 18904370
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    |||||||||||||||||||||| || |||||||||||| |||||||| ||||||||||||||||||||||||||    
T  18904443 aaaattgtagtttttgtacttaaggggccaaaattgcacgtttttgaaagttaaggggggaaaagtgcacttta 18904370  T

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Target: chr2; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 18906008 - 18906085
Alignment:
Q  1 ggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||| |||||   ||||||||||||||||||    
T  18906008 ggctaaaattgtagtttttgtacttagggggctaaaattgcaagtttttgaaagttagaaggggaaaagtgcacttta 18906085  T

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Target: chr2; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 23869557 - 23869632
Alignment:
Q  2 gctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||| | ||||||||| ||||||||||||||||    
T  23869557 gctaaaattgtagtttttgtatttagggggccaaaattgcaagttttt-aaagttaagggtggaaaagtgcacttta 23869632  T

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Target: chr2; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 82
Target Start/End: Original strand, 36450947 - 36451022
Alignment:
Q  6 aaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacct 82  Q
    |||||||||||| |||||||||||  |||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  36450947 aaattgtagtttctgtacttaggggaccaaaattgcaagtttttgaaagttaa-gggggaaaagtgcactttaacct 36451022  T

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Target: chr2; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 22848267 - 22848188
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctta 84  Q
    |||||||||||||||||| ||||||  |||||||||||||||||||| ||||| ||||| |||||||||||||| |||||    
T  22848267 aaaattgtagtttttgtatttaggggaccaaaattgcaagtttttgaaagttaggggggtaaaagtgcactttagcctta 22848188  T

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Target: chr2; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 41879236 - 41879310
Alignment:
Q  4 taaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||| | ||||||||| ||||||| ||||||    
T  41879236 taaaattgtagtttatgtacttagggggccaaaattgcaagtttttgaaaattaagggggaaaaagtgtacttta 41879310  T

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Target: chr2; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 7898767 - 7898690
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacct 82  Q
    ||||||||||||| | ||||||||  || |||||||||||||||||| |||||||||| |||||||||||||||||||    
T  7898767 aaaattgtagtttctatacttaggaggcaaaaattgcaagtttttgaaagttaaggggagaaaagtgcactttaacct 7898690  T

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Target: chr2; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 11258834 - 11258914
Alignment:
Q  3 ctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagtta-aggggggaaaagtgcactttaacctt 83  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| || |||||||| ||||||||| ||||    
T  11258834 ctaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagttagagaggggaaaa-tgcactttagcctt 11258914  T

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Target: chr2; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 78
Target Start/End: Original strand, 1034495 - 1034567
Alignment:
Q  6 aaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||| ||||| |||| ||||| |||||||||||| |||||||| ||||||||||||||||||||||||||    
T  1034495 aaattgtggttttggtacgtagggggccaaaattgcatgtttttgaaagttaaggggggaaaagtgcacttta 1034567  T

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Target: chr2; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 22587979 - 22588058
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaaccttaa 85  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||| ||||| | |||||||| ||||||||| ||||||    
T  22587979 aaaattgtagtttttgtacataggg-gccaaaattgcaagtttttgaaagttatgaggggaaaaatgcactttagccttaa 22588058  T

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Target: chr2; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 13568048 - 13567970
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 83  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||| | |||   |||||||||| ||||||||||||    
T  13568048 aaaattgtagtttttgtatttagggggccaaaattgcaagtttttgaaacttagaaggggaaaagtacactttaacctt 13567970  T

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Target: chr2; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 18299449 - 18299376
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||||||||| ||||||||  |||||||||| |||||||||| ||||| ||| ||||||||||||||||    
T  18299449 aaaattgtagtttttatacttaggtggccaaaattgaaagtttttgaaagttacgggtggaaaagtgcacttta 18299376  T

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Target: chr2; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 18869000 - 18868927
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    |||||||||||||||||| |||||  ||||||||||||||||||||| ||||| ||| |||||||| |||||||    
T  18869000 aaaattgtagtttttgtatttaggaggccaaaattgcaagtttttgaaagttaggggtggaaaagtacacttta 18868927  T

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Target: chr2; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 38839318 - 38839245
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    |||||||||||||||||| |||||| || |||||||||||||||||| | ||||||||| |||| |||||||||    
T  38839318 aaaattgtagtttttgtagttagggggctaaaattgcaagtttttgaaaattaagggggaaaaaatgcacttta 38839245  T

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Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 83
Target Start/End: Original strand, 802616 - 802693
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 83  Q
    |||||||||||||||||||  |||| ||||||||||||||||||||| | || ||||||||||||| ||||||| ||||    
T  802616 aaaattgtagtttttgtacacagggggccaaaattgcaagtttttgaaactt-aggggggaaaagtacactttagcctt 802693  T

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Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 13030365 - 13030295
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||| ||||||||||||||| ||||||||| ||||||||||| |||||  |||||||||||||||||||    
T  13030365 aaaattgtaatttttgtacttaggg-gccaaaattacaagtttttgaaagtta--gggggaaaagtgcacttta 13030295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 18300749 - 18300820
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||||||||||||||||||| | ||||||||||||||| ||| |||||  |||||||||||||| ||||    
T  18300749 aaaattgtagtttttgtacttagggggtcaaaattgcaagtttatgaaagtta--gggggaaaagtgcaattta 18300820  T

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Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 41878170 - 41878095
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgca---agtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||||||| ||||||||||| ||||||||||||   ||||||||| |||||||||||| |||||||||||||    
T  41878170 aaaattgtagtttctgtacttagggggccaaaattgcaaatagtttttgaaagttaagggggg-aaagtgcacttta 41878095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 78
Target Start/End: Original strand, 11938823 - 11938886
Alignment:
Q  15 tttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||||||||   |||||||||||||||||||| ||||| ||| ||||||||||||||||    
T  11938823 tttttgtacttaggagaccaaaattgcaagtttttgaaagttaggggtggaaaagtgcacttta 11938886  T

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Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 18797323 - 18797249
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaagggg-ggaaaagtgcacttta 78  Q
    ||||||||||||||  |||||| || | ||||||||||||||||||| ||||| |||| ||||||||||||||||    
T  18797323 aaaattgtagttttaatacttaaggggtcaaaattgcaagtttttgaaagttagggggtggaaaagtgcacttta 18797249  T

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Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 32739699 - 32739647
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagtta 57  Q
    ||||||||||||||||||| || || ||||||||||||||||||||| |||||    
T  32739699 aaaattgtagtttttgtacataaggggccaaaattgcaagtttttgaaagtta 32739647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 24476869 - 24476937
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcact 75  Q
    |||||||||||||||||||||||||  |||||||| ||||||||| | ||||  ||||| |||||||||||    
T  24476869 aaaattgtagtttttgtacttaggggaccaaaattacaagtttttaaaagtt--gggggaaaaagtgcact 24476937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 810806 - 810852
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttga 51  Q
    |||||||||||||||||||  |||| |||||||||||||||||||||    
T  810806 aaaattgtagtttttgtacacagggggccaaaattgcaagtttttga 810852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 83
Target Start/End: Original strand, 13570582 - 13570660
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 83  Q
    |||||| ||||||||||||||| ||  | |||||||||||||||||| ||||| |||  ||||| ||||||||| ||||    
T  13570582 aaaattatagtttttgtacttaagggactaaaattgcaagtttttgaaagttatgggtagaaaaatgcactttagcctt 13570660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 16446230 - 16446157
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    |||||||||||||||||| ||| |  |  |||||||||||||||||| |||||||||  ||||| |||||||||    
T  16446230 aaaattgtagtttttgtatttatgaggttaaaattgcaagtttttgaaagttaagggtagaaaaatgcacttta 16446157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 83
Target Start/End: Original strand, 21837298 - 21837356
Alignment:
Q  23 cttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 83  Q
    ||||||| ||||||||||||||||||||| |||||  |||| |||||||||||||| ||||    
T  21837298 cttagggggccaaaattgcaagtttttgaaagtta--ggggaaaaagtgcactttagcctt 21837356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 24475300 - 24475248
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagtta 57  Q
    ||||||||||||||| ||||||||| || |||||| ||||||||||| |||||    
T  24475300 aaaattgtagtttttatacttagggggcaaaaattacaagtttttgaaagtta 24475248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 28617998 - 28617946
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagtta 57  Q
    ||||||| ||||||||||||| ||| |||||||||||||| |||||| |||||    
T  28617998 aaaattgaagtttttgtacttggggggccaaaattgcaagattttgaaagtta 28617946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 26544228 - 26544152
Alignment:
Q  1 ggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    |||||||| ||||||||||||||||| ||| ||||||||| || ||||| | | ||| |||  |||||||||||||||    
T  26544228 ggctaaaactgtagtttttgtactta-ggaaccaaaattgtaaatttttaaaaattaggggtagaaaagtgcacttta 26544152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 1033284 - 1033214
Alignment:
Q  6 aaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||| || |||| ||| |||||| ||||||||||||||||||| | |||| ||||||||||||| |||||||    
T  1033284 aaattataattttggtatttaggg-gccaaaattgcaagtttttaaaagtt-aggggggaaaagtacacttta 1033214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 5819741 - 5819824
Alignment:
Q  8 attgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaaccttaacattact 92  Q
    |||||||||||||| | || || |||||||| |||| ||||||| | |||||||||| ||||||| | ||| ||||||| |||||    
T  5819741 attgtagtttttgttcatatggggccaaaatcgcaactttttgaaacttaagggggg-aaagtgcgccttagccttaactttact 5819824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 2e-27; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 25523145 - 25523063
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaaccttaaca 87  Q
    ||||||||||||||||||||||||| || |||||||||||||||||| |||||||||||||||||||||||||| ||| ||||    
T  25523145 aaaattgtagtttttgtacttagggggctaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcctaaaca 25523063  T

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Target: chr5; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 22940647 - 22940720
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  22940647 aaaattgtaatttttgtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcacttta 22940720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 19752987 - 19752910
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 83  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||| ||||    
T  19752987 aaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcactttagcctt 19752910  T

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Target: chr5; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 82
Target Start/End: Original strand, 20216788 - 20216865
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacct 82  Q
    ||||||||||||||||||  |||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||    
T  20216788 aaaattgtagtttttgtatatagggagctaaaattgcaagtttttgaaaattaaggggggaaaagtgcactttaacct 20216865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 24332989 - 24332911
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 83  Q
    ||||||||||||||||||| || || ||||||||||||||||||||| | ||||||||| |||||||||||||||||||    
T  24332989 aaaattgtagtttttgtacataaggggccaaaattgcaagtttttgaaacttaagggggaaaaagtgcactttaacctt 24332911  T

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Target: chr5; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 16650876 - 16650953
Alignment:
Q  1 ggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||||||||||||| ||||||||| | ||||||||||||||||| | ||||||||| ||||||||||||||||    
T  16650876 ggctaaaattgtagtttttatacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcacttta 16650953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 28538756 - 28538679
Alignment:
Q  1 ggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    |||||||||||||||||||||||||| || | ||||||||||||||||||| ||||| ||| ||||||||||||||||    
T  28538756 ggctaaaattgtagtttttgtacttaaggggtcaaaattgcaagtttttgaaagttacgggtggaaaagtgcacttta 28538679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 5730517 - 5730444
Alignment:
Q  6 aaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaagg-ggggaaaagtgcacttta 78  Q
    ||||||| ||||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  5730517 aaattgtggttttggtacttaggaagccaaaattgcaagtttttgaaagttaagggggggaaaagtgcacttta 5730444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 18486927 - 18487000
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    |||||||| |||| | ||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||||    
T  18486927 aaaattgtggtttctatacttagggggccaaaattgcaagtttttgaaagttaagggggggaaagtgcacttta 18487000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 33160311 - 33160384
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||||||| | ||||||||| || |||||||||||||||||| | ||||||||||||||||||||||||    
T  33160311 aaaattgtagtttctatacttagggggctaaaattgcaagtttttgaaaattaaggggggaaaagtgcacttta 33160384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 36486513 - 36486593
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaaccttaa 85  Q
    ||||||||||||||||||||||||| | ||||||||||||||||| | ||||| ||||| |||||||||||| | ||||||    
T  36486513 aaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaaagtgcacttcagccttaa 36486593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 33158174 - 33158095
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctta 84  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||| ||||| ||||  |||| ||||||||| |||||    
T  33158174 aaaattgtagtttttgtacttagggtgtcaaaattgcaagtttttgaaagttagggggaaaaaaatgcactttagcctta 33158095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 83
Target Start/End: Original strand, 28539845 - 28539922
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 83  Q
    ||||||||||||||||||||||| | | ||||||||||||||||| | |||| ||||||||||| ||||||||||||||    
T  28539845 aaaattgtagtttttgtacttagagggtcaaaattgcaagtttttaaaagtt-aggggggaaaaatgcactttaacctt 28539922  T

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Target: chr5; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 1796130 - 1796057
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||||||||||||||||||  |||||| |||||||||||||| ||||| ||| |||||| |||||||||    
T  1796130 aaaattgtagtttttgtacttaggtggccaaagttgcaagtttttgaaagttaggggtggaaaaatgcacttta 1796057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 20214271 - 20214199
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||||||||||||| ||| | || |||||||||||||||||| ||||||| ||||||||||||||||||    
T  20214271 aaaattgtagtttttgtacatagagtgctaaaattgcaagtttttgaaagttaag-ggggaaaagtgcacttta 20214199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 78
Target Start/End: Original strand, 5778862 - 5778934
Alignment:
Q  6 aaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||| ||||| |||||||||| || |||||||||||||||||| |||||  |||||||||||||||||||    
T  5778862 aaattgtggttttggtacttagggggcaaaaattgcaagtttttgaaagttagagggggaaaagtgcacttta 5778934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 19754155 - 19754217
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaa 68  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||| |||| |||||||||||    
T  19754155 aaaattgtagtttttgtatttagggggccaaaattgcaagtttttgaaagtt-aggggggaaaa 19754217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 57
Target Start/End: Complemental strand, 34893739 - 34893689
Alignment:
Q  7 aattgtagtttttgtacttagggagccaaaattgcaagtttttgatagtta 57  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  34893739 aattgtagtttttgtacatagggagccaaaattgcaagtttttgaaagtta 34893689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 18154569 - 18154497
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||||||||||||||||||| | |||||||| |||||||||| ||||||||||  |||||| |||||||    
T  18154569 aaaattgtagtttttgtacttaggg-gtcaaaattgtaagtttttgaaagttaaggggaaaaaagttcacttta 18154497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 25056406 - 25056479
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||||||||  ||||||||| | ||||||||||||||||||| ||||| | | ||||||||||||||||    
T  25056406 aaaattgtagttttaatacttagggggtcaaaattgcaagtttttgaaagttaggagtggaaaagtgcacttta 25056479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 40255697 - 40255770
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||||||| |||| |||||| | ||||||||||||||||| | | ||||| ||||||||||||||||||    
T  40255697 aaaattgtagtttctgtatttagggggtcaaaattgcaagtttttaaaaattaagaggggaaaagtgcacttta 40255770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 7311670 - 7311607
Alignment:
Q  1 ggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaagggggg 64  Q
    ||||||||||||||||||||||||| ||  ||||| ||||||||||||||| ||||| ||||||    
T  7311670 ggctaaaattgtagtttttgtacttgggaggccaatattgcaagtttttgaaagttaggggggg 7311607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 18485214 - 18485136
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 83  Q
    |||||||| |||||  ||||||||| ||||||||||||||||||| | |||||  |||| |||||||||||||| ||||    
T  18485214 aaaattgttgttttgatacttagggggccaaaattgcaagttttttaaagttagaggggaaaaagtgcactttagcctt 18485136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 25524152 - 25524226
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagtta-aggggggaaaagtgcacttta 78  Q
    ||||||||||||||||||||||||| ||||||||| ||| ||||| | | |||  ||||||||||||||||||||    
T  25524152 aaaattgtagtttttgtacttagggggccaaaattacaaatttttaaaaattaggggggggaaaagtgcacttta 25524226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 5777974 - 5777904
Alignment:
Q  6 aaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||| ||||| |||||||||| | ||||||||||||||||||| |||||  ||||| |||||||||||||    
T  5777974 aaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagtta--ggggggaaagtgcacttta 5777904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 79
Target Start/End: Complemental strand, 42195208 - 42195136
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaa 79  Q
    |||||||||| |||||||| ||||| |||||||| |||| ||||| | ||||||||||| |||||||||||||||    
T  42195208 aaaattgtagattttgtacatagggggccaaaatcgcaactttttaa-agttaaggggg-aaaagtgcactttaa 42195136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 81
Target Start/End: Complemental strand, 38834165 - 38834087
Alignment:
Q  2 gctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacc 81  Q
    |||||||||||||||||||||| || || | |||||| |||| ||||| | ||||||||||  |||| ||||||||||||    
T  38834165 gctaaaattgtagtttttgtacataagg-gtcaaaatcgcaactttttaaaagttaaggggaaaaaaatgcactttaacc 38834087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 2685820 - 2685774
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttga 51  Q
    |||||||||||||||||||||||||  ||||||||  ||||||||||    
T  2685820 aaaattgtagtttttgtacttaggggaccaaaattataagtttttga 2685774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 5962593 - 5962643
Alignment:
Q  1 ggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttga 51  Q
    |||||||||| ||||||||||||||||||  |||||||| ||| |||||||    
T  5962593 ggctaaaattatagtttttgtacttaggggaccaaaattacaaatttttga 5962643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 1015561 - 1015492
Alignment:
Q  4 taaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgca 73  Q
    ||||||||||| ||||||||  |||| |||||||||| || ||||| | ||||| ||| |||||||||||    
T  1015561 taaaattgtaggttttgtacacagggggccaaaattgtaactttttaaaagttaggggaggaaaagtgca 1015492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 36485376 - 36485303
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    |||||| ||||||||||||||| |  | |||||||| |||||||| | ||||| ||| |||||| |||||||||    
T  36485376 aaaattatagtttttgtacttaagaggtcaaaattgtaagttttttaaagttaggggtggaaaaatgcacttta 36485303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 1797322 - 1797366
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagttttt 49  Q
    |||||||||||||||||   || ||||||||||||||||||||||    
T  1797322 aaaattgtagtttttgtttataaggagccaaaattgcaagttttt 1797366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 8e-27; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 3 - 84
Target Start/End: Original strand, 24426098 - 24426179
Alignment:
Q  3 ctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctta 84  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||  ||||| |||||||||||||||||||    
T  24426098 ctaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagttagaggggggaaagtgcactttaacctta 24426179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 24422876 - 24422803
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||| ||||||||||||||    
T  24422876 aaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagttaagggggtaaaagtgcacttta 24422803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 37526902 - 37526982
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaaccttaa 85  Q
    |||||||| |||| | || |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  37526902 aaaattgtggtttctatatttagggagccaaaattgcaagtttttgaaagttaaggggggaaaagtacactttaaccttaa 37526982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 52275044 - 52274965
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctta 84  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||| ||||| ||||| |||||||||||||| |||||    
T  52275044 aaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagttaggggggtaaaagtgcactttagcctta 52274965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 83
Target Start/End: Original strand, 39153141 - 39153219
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 83  Q
    ||||||||||||||||||| || || ||||||||||||||||||||| | ||||||||| |||||||||||||||||||    
T  39153141 aaaattgtagtttttgtacataaggggccaaaattgcaagtttttgaaacttaagggggaaaaagtgcactttaacctt 39153219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 11437224 - 11437297
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    |||||||||||||||||||||| ||  |||||||||||||||||||| ||||||||||| ||||||||||||||    
T  11437224 aaaattgtagtttttgtacttaagggaccaaaattgcaagtttttgaaagttaagggggaaaaagtgcacttta 11437297  T

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Target: chr1; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 23980491 - 23980564
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    |||||| |||||||||||||||||||||||||||||||||||||| | |||||  |||||||||||||||||||    
T  23980491 aaaattatagtttttgtacttagggagccaaaattgcaagttttttaaagttagagggggaaaagtgcacttta 23980564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 82
Target Start/End: Original strand, 45149996 - 45150072
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacct 82  Q
    |||||||| ||||||||||||| || ||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  45149996 aaaattgttgtttttgtacttaaggggccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcactttaacct 45150072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 82
Target Start/End: Original strand, 52828096 - 52828172
Alignment:
Q  6 aaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacct 82  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||| | |||  |||||||||||||||||||||||    
T  52828096 aaattgtggttttggtacttagggagccaaaattgcaagtttttgaaaattagagggggaaaagtgcactttaacct 52828172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 39222494 - 39222572
Alignment:
Q  1 ggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagtt-aaggggggaaaagtgcacttta 78  Q
    |||||| |||||||||||| ||||||||| ||||||||||||||||||||| |||| ||||||| ||||||||||||||    
T  39222494 ggctaacattgtagtttttatacttagggggccaaaattgcaagtttttgaaagttaaagggggtaaaagtgcacttta 39222572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 14999360 - 14999288
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||| |||| ||||||||||||| |||||||    
T  14999360 aaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagtt-aggggggaaaagtacacttta 14999288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 39152007 - 39151930
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacct 82  Q
    ||||||||||||||||||| ||||| ||||||||| ||||||||||| | ||||||||| |||| |||||||||||||    
T  39152007 aaaattgtagtttttgtacatagggggccaaaattacaagtttttgaaacttaagggggaaaaaatgcactttaacct 39151930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 43058865 - 43058785
Alignment:
Q  1 ggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacct 82  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||| | |||| |||||| ||||||| ||||||||||    
T  43058865 ggctaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttcaaagtt-agggggaaaaagtgtactttaacct 43058785  T

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Target: chr1; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 45148656 - 45148584
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||| ||| ||||||||||||||    
T  45148656 aaaattgtagttttt-tacttagggggccaaaattgcaagtttttgaaagttaagcgggaaaaagtgcacttta 45148584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 51684442 - 51684369
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||||||||| ||| ||||| ||||||||||||| ||||| | ||||||||||||||||||||||||||    
T  51684442 aaaattgtagtttttatacatagggggccaaaattgcaactttttaaaagttaaggggggaaaagtgcacttta 51684369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 52827422 - 52827345
Alignment:
Q  6 aaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 83  Q
    ||||||| ||||| |||||||||| | ||||||||||||||||||| ||||| |||||||||||||||||||| ||||    
T  52827422 aaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcactttagcctt 52827345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 36612929 - 36612851
Alignment:
Q  4 taaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 83  Q
    ||||||||||||||||||||||| | | |||||||||||| ||||||| |||||||||||||||| ||||||||| ||||    
T  36612929 taaaattgtagtttttgtacttaag-atccaaaattgcaaatttttgaaagttaaggggggaaaaatgcactttagcctt 36612851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 82
Target Start/End: Complemental strand, 50680409 - 50680331
Alignment:
Q  3 ctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacct 82  Q
    |||||||| |||||||| ||||||||| ||||||||||||||||||||  ||||||| |||||||| |||||||||||||    
T  50680409 ctaaaattatagtttttatacttagggggccaaaattgcaagtttttggaagttaag-ggggaaaaatgcactttaacct 50680331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 11436118 - 11436040
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 83  Q
    ||||||||||||||| ||||||    ||||||||||||||||||||| |||||| ||||||||||||||||||| ||||    
T  11436118 aaaattgtagtttttatacttaaaaggccaaaattgcaagtttttgaaagttaaagggggaaaagtgcactttagcctt 11436040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 39698639 - 39698561
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 83  Q
    |||||| |||||| ||||||||||| |||||||||| |||||||| | |||||||||||| ||||||||||||| ||||    
T  39698639 aaaattatagtttctgtacttagggggccaaaattgaaagtttttaaaagttaaggggggtaaagtgcactttagcctt 39698561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 83
Target Start/End: Original strand, 45157234 - 45157311
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 83  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||| | || ||||||| ||||||||||||| ||||    
T  45157234 aaaattgtagtttttgtacatagggggccaaaattgcaagtttttgaaactt-agggggggaaagtgcactttagcctt 45157311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 50681632 - 50681702
Alignment:
Q  8 attgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    |||||||||||| || |||| ||||||||||||||||||||||| | ||||| ||||||||||||||||||    
T  50681632 attgtagtttttatagttagagagccaaaattgcaagtttttgaaaattaagaggggaaaagtgcacttta 50681702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 35067027 - 35067100
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||||||||||| | ||||| |||||||| |||| ||||||| | ||||||||||||||||||||||||    
T  35067027 aaaattgtagtttttgttcatagggggccaaaatcgcaactttttgaaacttaaggggggaaaagtgcacttta 35067100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 36613929 - 36614002
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||| | ||||| ||| |||||| |||||||||    
T  36613929 aaaattgtagtttttgtacttagggggccaaaattacaagtttttaaaagttaggggaggaaaaatgcacttta 36614002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 39699792 - 39699864
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||||||| ||||||||||| | |||||||||||||| |||| |||| |||||||||||||||||||||    
T  39699792 aaaattgtagtttctgtacttagggggtcaaaattgcaagttattgaaagtt-aggggggaaaagtgcacttta 39699864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 35594292 - 35594215
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 83  Q
    ||||||||||||||  ||||||||| | ||||||||||||||||||| ||||| ||| |||||||||||||||| ||||    
T  35594292 aaaattgtagttttaatacttaggg-gtcaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagcctt 35594215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 7674602 - 7674531
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    |||||||||||||||||||||||||  |||||||||||||||||| | |||| |||||||||||| ||||||||    
T  7674602 aaaattgtagtttttgtacttaggg-cccaaaattgcaagtttttaaaagtt-aggggggaaaagggcacttta 7674531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 51685790 - 51685863
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||||||||||||| ||| | |||||||| |||| ||||||| |||||  |||||||||||||||||||    
T  51685790 aaaattgtagtttttgtacatagagggccaaaatcgcaactttttgaaagttagagggggaaaagtgcacttta 51685863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 41364903 - 41364832
Alignment:
Q  6 aaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||| ||||| ||| |||||| ||||||||||||||||||||| |||| ||||| |||||||||||||||    
T  41364903 aaattgtggttttggtatttagggggccaaaattgcaagtttttgaaagtt-aggggagaaaagtgcacttta 41364832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 82
Target Start/End: Original strand, 52276186 - 52276265
Alignment:
Q  3 ctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacct 82  Q
    ||||| || |||||||||||||||||| ||||||||| ||| ||||||| |||||   |||| |||||||||||||||||    
T  52276186 ctaaatttatagtttttgtacttagggggccaaaattacaaatttttgaaagttagaagggggaaagtgcactttaacct 52276265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 83
Target Start/End: Original strand, 33088642 - 33088720
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 83  Q
    ||||||||||||||||||||||  | | |||||||||||||||||||  ||||  | ||||||||||||||||| ||||    
T  33088642 aaaattgtagtttttgtacttaaagggtcaaaattgcaagtttttgaatgttagagagggaaaagtgcactttagcctt 33088720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 83
Target Start/End: Original strand, 43378738 - 43378815
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 83  Q
    ||||||||| |||||||||||||||   |||||||| |||||||||| |||||| | | ||||||||||||||||||||    
T  43378738 aaaattgtaatttttgtacttaggggatcaaaattgtaagtttttgaaagttaa-gagagaaaagtgcactttaacctt 43378815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 44404518 - 44404440
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 83  Q
    |||||| |||||||||||||||||| || |||||||| ||||||||| ||||| | ||| ||||||||| |||| ||||    
T  44404518 aaaattatagtttttgtacttagggggctaaaattgctagtttttgaaagttatgagggaaaaagtgcattttagcctt 44404440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 11190461 - 11190388
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||| ||||||||||  |||||| |||||||||||| ||||| | | |||||||| |||||||||||||||    
T  11190461 aaaattgcagtttttgtatatagggaaccaaaattgcaactttttaaaatttaaggggtgaaaagtgcacttta 11190388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 79
Target Start/End: Complemental strand, 45156126 - 45156051
Alignment:
Q  4 taaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaa 79  Q
    |||||||||||||||||||| |||   | |||||||| |||||||||| | ||||||| ||||||||| |||||||    
T  45156126 taaaattgtagtttttgtacatagaaggtcaaaattgtaagtttttgaaacttaagggaggaaaagtgaactttaa 45156051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 7983125 - 7983049
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacct 82  Q
    |||||||| |||||  ||| ||||| |||||||||||||||| |||| |||| | ||| |||||||||||||||||||    
T  7983125 aaaattgtggttttgatacatagggggccaaaattgcaagttgttgaaagtt-acgggagaaaagtgcactttaacct 7983049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 41366156 - 41366233
Alignment:
Q  6 aaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 83  Q
    ||||||| |||||  |||||| || || ||||||||| |||||||| ||||| | |||||||||||||||||| ||||    
T  41366156 aaattgtggttttgatacttaaggggctaaaattgcatgtttttgaaagttaggaggggaaaagtgcactttagcctt 41366233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 43060031 - 43060104
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    |||||||||||||||||||||| || | ||||||| ||| ||||||| |||||  ||||| ||||| |||||||    
T  43060031 aaaattgtagtttttgtacttaaggggtcaaaatttcaaatttttgaaagttagagggggtaaagtacacttta 43060104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 46066603 - 46066530
Alignment:
Q  1 ggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactt 76  Q
    ||||||||||||||||||||||| || || || ||||| |||| ||||||| |||||  || ||||||||||||||    
T  46066603 ggctaaaattgtagtttttgtacataaggggctaaaatcgcaactttttgaaagtta--ggaggaaaagtgcactt 46066530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 14999983 - 15000058
Alignment:
Q  8 attgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 83  Q
    ||||||| ||||||||||||||   ||||||||||||||||| | ||||| || || ||||||| |||||| ||||    
T  14999983 attgtagattttgtacttaggggatcaaaattgcaagtttttaaaagttagggaggaaaaagtgaactttagcctt 15000058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 46
Target Start/End: Original strand, 44411990 - 44412032
Alignment:
Q  4 taaaattgtagtttttgtacttagggagccaaaattgcaagtt 46  Q
    ||||||||||||||||||||||||||  | |||||||||||||    
T  44411990 taaaattgtagtttttgtacttaggggactaaaattgcaagtt 44412032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 83
Target Start/End: Complemental strand, 39221405 - 39221356
Alignment:
Q  35 aaattgcaagtttttgatagtta-aggggggaaaagtgcactttaacctt 83  Q
    ||||||||||||||||| ||||| |||||||||||||||| |||| ||||    
T  39221405 aaattgcaagtttttgaaagttagaggggggaaaagtgcaatttagcctt 39221356  T

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Target: chr3 (Bit Score: 59; Significance: 5e-25; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 5 - 83
Target Start/End: Original strand, 54540815 - 54540893
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 83  Q
    |||||||||||||||||||||| || | ||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  54540815 aaaattgtagtttttgtacttaaggggtcaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcctt 54540893  T

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Target: chr3; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 7267719 - 7267643
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacct 82  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  7267719 aaaattgtagtttctgtacttagggggccaaaattgcaagtttttgaaagttaag-ggggaaaagtgcactttaacct 7267643  T

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Target: chr3; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 7758478 - 7758405
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||| ||||||||||||||    
T  7758478 aaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagttaagggggaaaaagtgcacttta 7758405  T

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Target: chr3; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 29932724 - 29932803
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaaccttaa 85  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| |||||  ||||||||||||||||||| ||||||    
T  29932724 aaaattgtagtttttgtacttaggg-gccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagccttaa 29932803  T

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Target: chr3; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 29981878 - 29981957
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaaccttaa 85  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| |||||  ||||||||||||||||||| ||||||    
T  29981878 aaaattgtagtttttgtacttaggg-gccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagccttaa 29981957  T

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Target: chr3; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 19984925 - 19984852
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||| | ||| ||||||||||||||||||||    
T  19984925 aaaattgtagtttttgtacatagggggccaaaattgcaagtttttgaaacttagggggggaaaagtgcacttta 19984852  T

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Target: chr3; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 82
Target Start/End: Original strand, 47610606 - 47610682
Alignment:
Q  6 aaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacct 82  Q
    ||||||| ||||| |||||||||| ||||||||||||||||||||| |||||  |||||||||||||||||||||||    
T  47610606 aaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttaacct 47610682  T

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Target: chr3; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 55192020 - 55192099
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaaccttaa 85  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||| | ||||||| ||||||    
T  55192020 aaaattgtagtttttgtacttagagggccaaaattgcaagtttttgaaagttaaggggggaaaa-tacactttagccttaa 55192099  T

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Target: chr3; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 54539831 - 54539752
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctta 84  Q
    |||||||||||||||||| |||||| |  |||||||||||||||||| ||||||||| |||||||||||||||| |||||    
T  54539831 aaaattgtagtttttgtatttagggggttaaaattgcaagtttttgaaagttaagggtggaaaagtgcactttagcctta 54539752  T

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Target: chr3; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 12700249 - 12700178
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| |||||  ||||| |||||||||||||    
T  12700249 aaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagtta--ggggggaaagtgcacttta 12700178  T

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Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 82
Target Start/End: Original strand, 7268852 - 7268928
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacct 82  Q
    ||||||||||||| | ||||||||  ||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  7268852 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcactttaacct 7268928  T

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Target: chr3; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 29931302 - 29931229
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    |||||||||||||||||| |||||| || |||||||||||||||||| ||||| ||| ||||||||||||||||    
T  29931302 aaaattgtagtttttgtatttagggggcaaaaattgcaagtttttgaaagttaggggtggaaaagtgcacttta 29931229  T

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Target: chr3; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 29980456 - 29980383
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    |||||||||||||||||| |||||| || |||||||||||||||||| ||||| ||| ||||||||||||||||    
T  29980456 aaaattgtagtttttgtatttagggggcaaaaattgcaagtttttgaaagttaggggtggaaaagtgcacttta 29980383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 24516536 - 24516464
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttt 77  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||| | ||||| ||||| |||||||||||||    
T  24516536 aaaattgtagtttttatacttagggtgccaaaattgcaagttttttaaagttaggggggaaaaagtgcacttt 24516464  T

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Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 47615591 - 47615646
Alignment:
Q  23 cttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  47615591 cttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcacttta 47615646  T

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Target: chr3; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 22776837 - 22776910
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||||||||||||| ||||| ||||||||||||| ||| ||| ||||| ||| ||||||||||||||||    
T  22776837 aaaattgtagtttttgtacatagggggccaaaattgcaactttctgaaagttaggggtggaaaagtgcacttta 22776910  T

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Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 47609772 - 47609700
Alignment:
Q  6 aaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||| ||||| |||||||||| | ||||||||||||||||||| ||||| ||||||||||||||| ||||    
T  47609772 aaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcatttta 47609700  T

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Target: chr3; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 51470047 - 51469975
Alignment:
Q  6 aaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||| ||||| |||||||||| ||||||||||||||||||||| | ||| || |||||||||||||||||    
T  51470047 aaattgtggttttggtacttagggggccaaaattgcaagtttttgaaaattagggagggaaaagtgcacttta 51469975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 46720019 - 46719944
Alignment:
Q  3 ctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||||||||||| ||| ||||| |||||||| |||| ||||| | |||||||||||||||| |||||||||    
T  46720019 ctaaaattgtagtttttatacatagggggccaaaatcgcaactttttaaaagttaaggggggaaaaatgcacttta 46719944  T

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Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 83
Target Start/End: Original strand, 12703525 - 12703602
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 83  Q
    ||||||||||||||||||||||||| ||||||||| ||| ||||||| |||| || ||| |||||||||||||| ||||    
T  12703525 aaaattgtagtttttgtacttagggggccaaaattacaaatttttgaaagtt-agagggaaaaagtgcactttagcctt 12703602  T

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Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 534575 - 534502
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||||||||||||| ||||  | ||||||||||||||||||| |||||  |||| ||||||||||||||    
T  534575 aaaattgtagtttttgtacataggaggtcaaaattgcaagtttttgagagttagaggggaaaaagtgcacttta 534502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 8456553 - 8456481
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    |||||||||||||||||| ||||||  |||||||||||||||||||| | || |||||| ||||||||||||||    
T  8456553 aaaattgtagtttttgtatttaggggaccaaaattgcaagtttttgaaaatt-agggggaaaaagtgcacttta 8456481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 47614261 - 47614188
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    |||||||| |||||  ||||||||| ||||||||||||||||||||| |||||  |||| ||||||||||||||    
T  47614261 aaaattgttgttttgatacttagggggccaaaattgcaagtttttgaaagttagaggggaaaaagtgcacttta 47614188  T

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Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 51038815 - 51038888
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||||||||||| | ||||| | ||||||||||| ||||| | ||||||||| ||||||||||||||||    
T  51038815 aaaattgtagtttttgttcatagggggtcaaaattgcaactttttaaaagttaagggtggaaaagtgcacttta 51038888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 52840629 - 52840702
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    |||||||| |||||  || |||||||||||||||||||||||||||| ||||| ||| ||||||| ||||||||    
T  52840629 aaaattgttgttttgataattagggagccaaaattgcaagtttttgaaagttaggggaggaaaagggcacttta 52840702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 5001275 - 5001203
Alignment:
Q  6 aaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||| ||||| |||||||||| |||||||||||||| |||||| || || ||| ||||||||||||||||    
T  5001275 aaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggaggaaaagtgcacttta 5001203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 19986095 - 19986170
Alignment:
Q  5 aaaattgtagtttttgtacttagg--gagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||||||||| ||| ||||  | ||||||||||||||||||||| | ||||| ||||||||||||||||||    
T  19986095 aaaattgtagtttttatacataggaggggccaaaattgcaagtttttgaaacttaagaggggaaaagtgcacttta 19986170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 5029708 - 5029780
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    |||||||| ||||| |||||||||  |||||||||||||| |||||| || | |||||||||||||||||||||    
T  5029708 aaaattgtggttttggtacttaggaggccaaaattgcaagattttgaaagat-aggggggaaaagtgcacttta 5029780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 34019170 - 34019227
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaagggg 62  Q
    ||||||||||| ||||||| ||||| | ||||||||||||||||||| ||||||||||    
T  34019170 aaaattgtagtgtttgtacctagggggtcaaaattgcaagtttttgaaagttaagggg 34019227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 51037615 - 51037539
Alignment:
Q  1 ggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||||||||||||||| | ||| | | ||||||||||| ||||||| |||||| ||| |||||||||||||||    
T  51037615 ggctaaaattgtagtttttgttcatagagggtcaaaattgcaactttttgaaagttaa-gggagaaaagtgcacttta 51037539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 23770428 - 23770508
Alignment:
Q  1 ggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacc 81  Q
    ||||||||||||||||||||||| || ||  ||||||||| || ||||| | | |||||||| ||||| ||||||||||||    
T  23770428 ggctaaaattgtagtttttgtacataagggaccaaaattgtaacttttttaaaattaaggggagaaaattgcactttaacc 23770508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 46721243 - 46721323
Alignment:
Q  3 ctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 83  Q
    ||||||||||||||||||||| ||||| |  ||||| |||| ||||| | ||||| |||| ||||||||||||||| ||||    
T  46721243 ctaaaattgtagtttttgtacatagggggttaaaatcgcaactttttaaaagttagggggagaaaagtgcactttagcctt 46721323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 31645050 - 31645003
Alignment:
Q  4 taaaattgtagtttttgtacttagggagccaaaattgcaagtttttga 51  Q
    ||||||||||||||||| |||||||| |||||||||| ||||||||||    
T  31645050 taaaattgtagtttttgcacttagggggccaaaattgtaagtttttga 31645003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 78
Target Start/End: Complemental strand, 49216321 - 49216250
Alignment:
Q  7 aattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||||||||||| ||||| | ||||||||||| ||||||| | ||| | | ||||||||||||||||    
T  49216321 aattgtagtttttgtacatagggggtcaaaattgcaactttttgaaacttaggcgtggaaaagtgcacttta 49216250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 53901416 - 53901484
Alignment:
Q  8 attgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||||||||||||| |||| ||||||||||| ||||| | | |||  |||||||||||||||||||    
T  53901416 attgtagtttttgtacttaaggagtcaaaattgcaacttttttaaactta--gggggaaaagtgcacttta 53901484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 535807 - 535880
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    |||||| |||||||  |||||| ||  |||||||||||||||||||| ||||| ||| |||||||| |||||||    
T  535807 aaaattatagttttaatacttaagggaccaaaattgcaagtttttgaaagttaggggtggaaaagtacacttta 535880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 53616037 - 53616114
Alignment:
Q  1 ggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    |||| |||||||||||||||||| || |||   |||||| ||||| ||| | ||||||||| ||||||||||||||||    
T  53616037 ggctgaaattgtagtttttgtacataaggaattaaaattacaagtgtttaaaagttaagggaggaaaagtgcacttta 53616114  T

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Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 6170349 - 6170281
Alignment:
Q  4 taaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgc 72  Q
    |||||||||| |||||||||||| ||   ||||||||||||||||||| ||||| ||| | ||||||||    
T  6170349 taaaattgtaatttttgtacttaagggatcaaaattgcaagtttttgaaagttatgggtgaaaaagtgc 6170281  T

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Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 78
Target Start/End: Original strand, 11671371 - 11671438
Alignment:
Q  10 tgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    |||||||||| || |||||| || |||||||||||||||||| |||| ||| || ||||||||||||||    
T  11671371 tgtagtttttatatttagggggctaaaattgcaagtttttgaaagtt-aggcggaaaaagtgcacttta 11671438  T

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Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 78
Target Start/End: Original strand, 51470481 - 51470552
Alignment:
Q  6 aaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||| ||||| ||||||||||   | ||||||||||||||||| |||| ||||||||| |||||||||||    
T  51470481 aaattgtggttttggtacttaggggatctaaattgcaagtttttgaaagtt-aggggggaagagtgcacttta 51470552  T

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Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 40426803 - 40426877
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaatt-gcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||| ||||||||  || || ||| ||||| |||| ||||| | ||||||||||||||||||||||||||    
T  40426803 aaaattgtaatttttgtatataaggggccgaaatttgcaacttttttaaagttaaggggggaaaagtgcacttta 40426877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 6249686 - 6249633
Alignment:
Q  4 taaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagtta 57  Q
    ||||||||||||||||||||||| ||    |||||||||||||||||| |||||    
T  6249686 taaaattgtagtttttgtacttaagggattaaaattgcaagtttttgaaagtta 6249633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 8875982 - 8875909
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||||||||||||| || || || |||||||||  |||||   | |||||||| |||||||||||||||    
T  8875982 aaaattgtagtttttgtacataaggggctaaaattgcagctttttcgaacttaaggggtgaaaagtgcacttta 8875909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 54987032 - 54987110
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaaccttaa 85  Q
    |||||| |||||||| ||| |||||  | ||||| |||| ||||||| | |||  ||||||||||||||||||||||||||    
T  54987032 aaaattatagtttttatacataggggactaaaatcgcaactttttgaaactta--gggggaaaagtgcactttaaccttaa 54987110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 52104553 - 52104479
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 83  Q
    |||||| |||||||||||| ||||   |||||||| ||| ||||||| |||||  |||||||||||||| |||||||||    
T  52104553 aaaattatagtttttgtacatagga--ccaaaattacaactttttgaaagtta--gggggaaaagtgcattttaacctt 52104479  T

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Target: scaffold0302 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 17546 - 17473
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||| ||||||||||||||    
T  17546 aaaattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagttaagggggaaaaagtgcacttta 17473  T

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Target: scaffold0302; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 18801 - 18874
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    |||||| |||||||||||| |||||  |||||||||||| ||||| | ||||| | ||| ||||||||||||||    
T  18801 aaaattatagtttttgtacctaggggaccaaaattgcaaatttttaaaagttaggagggaaaaagtgcacttta 18874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 2e-24; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 22630473 - 22630550
Alignment:
Q  1 ggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||| || |||||||||||||||||    
T  22630473 ggctaaaattgtagtttttgtaattagggggccaaaattgcaagtttttgaaagttatggagggaaaagtgcacttta 22630550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 11662576 - 11662656
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaaccttaa 85  Q
    |||||| |||||||||||| ||| |||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  11662576 aaaattatagtttttgtacatagagagctaaaattgcaagtttttgaaagttaaggggggaaaaatgcactttaaccttaa 11662656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 18371500 - 18371427
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    |||||||||||||||||||||| || ||||||||||||||||||||| ||||| | ||||||||||||||||||    
T  18371500 aaaattgtagtttttgtacttaaggggccaaaattgcaagtttttgaaagttaggaggggaaaagtgcacttta 18371427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 78
Target Start/End: Original strand, 3227620 - 3227692
Alignment:
Q  6 aaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||| ||||| |||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  3227620 aaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagggggggaaaagtgcacttta 3227692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 9 - 83
Target Start/End: Original strand, 20163585 - 20163659
Alignment:
Q  9 ttgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 83  Q
    ||||||||||||||| ||||||||||||||||||||||||||| ||||| ||| ||| |||||||||||| ||||    
T  20163585 ttgtagtttttgtacatagggagccaaaattgcaagtttttgaaagttaggggtggagaagtgcactttagcctt 20163659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 11658455 - 11658382
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||||||||||||| ||||| || ||||||||| |||||||| ||||||||||||||||||||| ||||    
T  11658455 aaaattgtagtttttgtacatagggggctaaaattgcatgtttttgaaagttaaggggggaaaagtgcaattta 11658382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 42886307 - 42886388
Alignment:
Q  1 ggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacct 82  Q
    |||||||||||||||||||||| |||||| | ||||||||||| ||||||| ||||| | || |||||||||||||||||||    
T  42886307 ggctaaaattgtagtttttgtatttagggggtcaaaattgcaaatttttgaaagttaggaggagaaaagtgcactttaacct 42886388  T

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Target: chr7; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 17781736 - 17781664
Alignment:
Q  6 aaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||| ||||| |||||||||| | ||||||||||||||||||| ||||| ||||||||||||||||||||    
T  17781736 aaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcacttta 17781664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 78
Target Start/End: Original strand, 17782579 - 17782651
Alignment:
Q  6 aaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||| ||||| |||||||||| ||||||||||||||||||||| |||||  |||||||||||||||||||    
T  17782579 aaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcacttta 17782651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 31659699 - 31659625
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaagggggg-aaaagtgcacttta 78  Q
    ||||||||||||||||||||||||| | |||||||| |||||||||| ||||| |||||| ||||||||||||||    
T  31659699 aaaattgtagtttttgtacttagggggtcaaaattgtaagtttttgaaagttagggggggtaaaagtgcacttta 31659625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 128627 - 128704
Alignment:
Q  6 aaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 83  Q
    ||||||| ||||| |||||||||| | ||||||||||| ||||||| ||||| || ||||||||||||||||||||||    
T  128627 aaattgtggttttggtacttagggggtcaaaattgcaaatttttgaaagttatggtgggaaaagtgcactttaacctt 128704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 7501877 - 7501950
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    |||||||| |||||  ||||||||| ||||||||||||||||||||| |||||  |||||||||||||||||||    
T  7501877 aaaattgttgttttgatacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcacttta 7501950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 127411 - 127340
Alignment:
Q  6 aaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||| ||||| ||||||||||  |||||||||||||||||||| |||| |||||||||||||||||||||    
T  127411 aaattgtggttttggtacttaggggaccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcacttta 127340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 31949397 - 31949325
Alignment:
Q  6 aaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||| ||||| |||||||||| ||||||||||||||||||||| | ||| || |||||||||||||||||    
T  31949397 aaattgtggttttggtacttagggggccaaaattgcaagtttttgaaaattagggagggaaaagtgcacttta 31949325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 78
Target Start/End: Original strand, 31949828 - 31949900
Alignment:
Q  6 aaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||| ||||| ||| |||||| ||||||||||||||||||||| ||||| |||||||| |||||||||||    
T  31949828 aaattgtggttttggtatttagggggccaaaattgcaagtttttgaaagttagggggggaagagtgcacttta 31949900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 18372482 - 18372544
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaa 68  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| | || |||||||||||    
T  18372482 aaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaaatt-aggggggaaaa 18372544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 47524599 - 47524532
Alignment:
Q  7 aattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 74  Q
    |||||| ||||| |||||||||| ||||||||||||||||||||| |||||  |||||||||||||||    
T  47524599 aattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcac 47524532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 3227182 - 3227111
Alignment:
Q  6 aaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||| ||||| |||||||||| ||||||||||||||||||||| | || ||||||| |||||||||||||    
T  3227182 aaattgtggttttggtacttagggggccaaaattgcaagtttttgaaaatt-agggggggaaagtgcacttta 3227111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 78
Target Start/End: Original strand, 47525393 - 47525465
Alignment:
Q  6 aaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||| |||||  ||||||||| || |||||||||||||||||| |||||  |||||||||||||||||||    
T  47525393 aaattgtggttttgatacttagggggctaaaattgcaagtttttgaaagttagagggggaaaagtgcacttta 47525465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 78
Target Start/End: Original strand, 34174010 - 34174080
Alignment:
Q  7 aattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    |||||| ||||| |||||||||| |||||||||||||| |||||| || | |||||||||||||||||||||    
T  34174010 aattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcacttta 34174080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 22629562 - 22629486
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaag---gggggaaaagtgcacttta 78  Q
    ||||||||||||||||||||||||  ||||||||| ||||||||||| | |||||   ||||||||| |||||||||    
T  22629562 aaaattgtagtttttgtacttaggaggccaaaattacaagtttttgaaaattaagggagggggaaaaatgcacttta 22629486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 48934928 - 48935001
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    |||||| |||||||||||||||| | | ||||||| ||||||||||| ||||| ||| |||||| |||||||||    
T  48934928 aaaattttagtttttgtacttagagggtcaaaattacaagtttttgaaagttaggggtggaaaaatgcacttta 48935001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 76
Target Start/End: Original strand, 14999180 - 14999249
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactt 76  Q
    |||||||||||||||||| |||||| | |||||||||||| |||||| | || |||||||||||||||||||    
T  14999180 aaaattgtagtttttgtatttagggggtcaaaattgcaag-ttttgaaaatt-aggggggaaaagtgcactt 14999249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 83
Target Start/End: Complemental strand, 7500502 - 7500453
Alignment:
Q  33 caaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 83  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||| ||||    
T  7500502 caaaattgcaagtttttgaaagttaag-ggggaaaagtgcactttagcctt 7500453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 21505490 - 21505419
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||||||||||||  | ||| |||||||| |||| ||||||| |||||  |||||||||||||||||||    
T  21505490 aaaattgtagtttttgtatatcgggggccaaaatcgcaactttttgaaagtta--gggggaaaagtgcacttta 21505419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 34351569 - 34351522
Alignment:
Q  4 taaaattgtagtttttgtacttagggagccaaaattgcaagtttttga 51  Q
    |||||||||||||| | ||||| | |||||||||||||||||||||||    
T  34351569 taaaattgtagtttctatacttggagagccaaaattgcaagtttttga 34351522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 47369857 - 47369779
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 83  Q
    |||||| ||||||||||||||| |  || |||||||||||||||||| ||||| |||   ||||||||| |||| ||||    
T  47369857 aaaattatagtttttgtacttatgaggctaaaattgcaagtttttgaaagttaggggaaaaaaagtgcattttagcctt 47369779  T

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Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 769489 - 769416
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    |||||| || ||||||||||||||  | ||||||||||||||||||| | |||  || |||||| |||||||||    
T  769489 aaaattataatttttgtacttaggatgtcaaaattgcaagtttttgaaaattacaggtggaaaattgcacttta 769416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 83
Target Start/End: Complemental strand, 5111492 - 5111440
Alignment:
Q  31 gccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 83  Q
    ||||||||  ||||||||||| | |||||||| ||||||||||||||| ||||    
T  5111492 gccaaaatcacaagtttttgaaacttaaggggtgaaaagtgcactttagcctt 5111440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 31661032 - 31661112
Alignment:
Q  3 ctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 83  Q
    |||||||| |||||||||||| ||  | | ||||||||||| ||||||| |||||  | ||| ||||||||||||| ||||    
T  31661032 ctaaaattatagtttttgtacgtaaagggtcaaaattgcaaatttttgaaagttagagaggggaaagtgcactttagcctt 31661112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 2e-24; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 16704522 - 16704595
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||| ||||||||||||||||    
T  16704522 aaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagttaagggaggaaaagtgcacttta 16704595  T

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Target: chr6; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 8659340 - 8659268
Alignment:
Q  6 aaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||| ||||| |||||||||| ||||||||||||||||||||| |||||  |||||||||||||||||||    
T  8659340 aaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcacttta 8659268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 8821948 - 8821876
Alignment:
Q  6 aaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||| ||||| |||||||||| ||||||||||||||||||||| |||||  |||||||||||||||||||    
T  8821948 aaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcacttta 8821876  T

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Target: chr6; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 7316338 - 7316392
Alignment:
Q  24 ttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  7316338 ttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcacttta 7316392  T

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Target: chr6; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 81
Target Start/End: Original strand, 1829628 - 1829704
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacc 81  Q
    ||||||||||||||| ||||||||| | ||||||||||||||||| | ||||| ||||  |||||||||||||||||    
T  1829628 aaaattgtagtttttatacttagggggtcaaaattgcaagtttttaaaagttagggggaaaaaagtgcactttaacc 1829704  T

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Target: chr6; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 78
Target Start/End: Original strand, 8822819 - 8822891
Alignment:
Q  6 aaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||| ||||| |||||||||| | ||||||||||||||||||| |||||| | |||||||||||||||||    
T  8822819 aaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttaaagagggaaaagtgcacttta 8822891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 78
Target Start/End: Original strand, 6842306 - 6842381
Alignment:
Q  3 ctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    |||||||||||||||||| || ||||| ||||||||||||| ||||||| | |||  |||||||||||||||||||    
T  6842306 ctaaaattgtagtttttgcacatagggggccaaaattgcaactttttgaaacttagagggggaaaagtgcacttta 6842381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 10784669 - 10784595
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggg-gggaaaagtgcacttta 78  Q
    ||||||||||||||| ||||||||| |  |||||||||||||||| | ||||||||| |||||||||||||||||    
T  10784669 aaaattgtagtttttatacttagggggttaaaattgcaagtttttaaaagttaagggagggaaaagtgcacttta 10784595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 14822436 - 14822366
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcact 75  Q
    ||||||||||||| | |||||| || ||||||||||||||||||||| | |||||||| ||||||||||||    
T  14822436 aaaattgtagtttctatacttatggggccaaaattgcaagtttttgaaaattaaggggtgaaaagtgcact 14822366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 14 - 83
Target Start/End: Complemental strand, 3721679 - 3721610
Alignment:
Q  14 gtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 83  Q
    ||||| |||||||||| | ||||||||||||||||||| |||||  ||||||||||||||||||| ||||    
T  3721679 gttttggtacttagggggtcaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcctt 3721610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 7314955 - 7314883
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    |||||||| |||||  ||||||||| ||||||||||||||||||||| |||||  |||||||||||||||||||    
T  7314955 aaaattgttgttttgatacttaggg-gccaaaattgcaagtttttgaaagttagagggggaaaagtgcacttta 7314883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 8660230 - 8660306
Alignment:
Q  6 aaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 83  Q
    ||||||| ||||| |||||||||| | ||||||||||||||||||| ||||| | |||||||||||||||||| ||||    
T  8660230 aaattgtggttttggtacttaggg-gtcaaaattgcaagtttttgaaagttaggaggggaaaagtgcactttagcctt 8660306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 27322093 - 27322165
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    |||||||| ||||| |||||||||| |||||||||||||| |||||| || | |||||||||||||||||||||    
T  27322093 aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcacttta 27322165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 78
Target Start/End: Original strand, 3722533 - 3722605
Alignment:
Q  6 aaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||| ||||| |||||||| | | ||||||||||||||||||| ||||| || |||||||||||||||||    
T  3722533 aaattgtggttttggtacttagagggtcaaaattgcaagtttttgaaagttagggagggaaaagtgcacttta 3722605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 16703647 - 16703573
Alignment:
Q  1 ggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    |||||||||||||||||||||| ||| |||  ||||||||||||||||||| || ||  |||||||||||||||||||    
T  16703647 ggctaaaattgtagtttttgtatttatgga-tcaaaattgcaagtttttgaaagata--gggggaaaagtgcacttta 16703573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 29473153 - 29473075
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 83  Q
    ||||||||  ||||||| | |||||| |||||||||||| ||||| | | |||||||||||||||||||||| ||||||    
T  29473153 aaaattgttatttttgttcatagggaaccaaaattgcaactttttaaaacttaaggggggaaaagtgcacttgaacctt 29473075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 27437904 - 27437831
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||||||||| |   ||||| ||||||||||||| ||||| | |||||||||| |||||||||||||||    
T  27437904 aaaattgtagtttttatttatagggggccaaaattgcaacttttttaaagttaaggggagaaaagtgcacttta 27437831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 82
Target Start/End: Original strand, 34834632 - 34834681
Alignment:
Q  33 caaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacct 82  Q
    ||||||||||||||||||| ||||| || |||||||||||||||||||||    
T  34834632 caaaattgcaagtttttgaaagttagggagggaaaagtgcactttaacct 34834681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 5658832 - 5658757
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaac 80  Q
    ||||||||||||||||||| |||||| | ||||||  || ||||| | | |||||||||||||| |||||||||||    
T  5658832 aaaattgtagtttttgtacatagggaactaaaattataactttttaaaacttaaggggggaaaaatgcactttaac 5658757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 14823600 - 14823674
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggg-gaaaagtgcacttta 78  Q
    ||||||||||||| |||||||| || || |||||||||||||||| | | |||||||||  ||||||||||||||    
T  14823600 aaaattgtagtttctgtacttaaggggctaaaattgcaagttttttaaaattaagggggaaaaaagtgcacttta 14823674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 26717137 - 26717182
Alignment:
Q  33 caaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||||||||| ||| | ||||||||||||||||||||||||    
T  26717137 caaaattgcaagtttctgaaacttaaggggggaaaagtgcacttta 26717182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 10785937 - 10786000
Alignment:
Q  4 taaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaa 68  Q
    |||||||||||||||||||||||||| |  |||||||||| ||||| | |||| |||||||||||    
T  10785937 taaaattgtagtttttgtacttagggggttaaaattgcaaatttttaaaagtt-aggggggaaaa 10786000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 26575079 - 26575131
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagtta 57  Q
    |||||||||||||||||||||| || |  |||||||||||||||||| |||||    
T  26575079 aaaattgtagtttttgtacttaaggggttaaaattgcaagtttttgaaagtta 26575131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 27318389 - 27318318
Alignment:
Q  6 aaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||| ||||| |||||||||| |||||||||||||| |||||| || | |||||| ||| ||||||||||    
T  27318389 aaattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-agggggaaaaggtgcacttta 27318318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 3333050 - 3333129
Alignment:
Q  4 taaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 83  Q
    |||||||||||||||||||| ||||| |||||||| |||| ||||| | | |||   ||||||||||||| |||| ||||    
T  3333050 taaaattgtagtttttgtacatagggggccaaaatcgcaactttttcaaacttagaaggggaaaagtgcaatttagcctt 3333129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 6840268 - 6840199
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactt 76  Q
    |||||| ||||||||||| ||| || |||||||| |||| ||||||| | |||||||||  |||||||||||    
T  6840268 aaaattatagtttttgtatttaaggggccaaaatcgcaactttttgaaacttaaggggg--aaagtgcactt 6840199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 78
Target Start/End: Complemental strand, 26574690 - 26574622
Alignment:
Q  10 tgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    |||||||||||||||||| |   ||||||||||||||||||| |||||  || || ||| |||||||||    
T  26574690 tgtagtttttgtacttagaggttcaaaattgcaagtttttgaaagttagaggtgggaaattgcacttta 26574622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 1e-22; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 7 - 85
Target Start/End: Original strand, 29968364 - 29968441
Alignment:
Q  7 aattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaaccttaa 85  Q
    ||||||||||||||||||||||| ||||||||||||||||||| | |||||| ||||||||||||||||||||| ||||    
T  29968364 aattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagttaa-gggggaaaagtgcactttaactttaa 29968441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 10007788 - 10007861
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    |||||||| |||| | ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  10007788 aaaattgtggtttctatacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcacttta 10007861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 12351997 - 12351917
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaaccttaa 85  Q
    ||||||||||||||||||||||||| | ||||||||||| ||||||| |||||||||||| ||| ||||||||| ||||||    
T  12351997 aaaattgtagtttttgtacttagggggtcaaaattgcaaatttttgaaagttaagggggggaaaatgcactttagccttaa 12351917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 30335716 - 30335637
Alignment:
Q  4 taaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 83  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||| | ||||||||| |||||| ||||||||| ||||    
T  30335716 taaaattgtaatttttgtacttagcgagccaaaattgcaagtttttaaaagttaagggtggaaaaatgcactttagcctt 30335637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 40471168 - 40471249
Alignment:
Q  1 ggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 83  Q
    |||||||||||||||||||||| ||| ||| ||||||||| |||||||| | |||||| ||||||||||||||||||||||||    
T  40471168 ggctaaaattgtagtttttgtatttatgga-ccaaaattgtaagttttttaaagttaaagggggaaaagtgcactttaacctt 40471249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 5514057 - 5513985
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||| |||| |||||| ||||||||||||||    
T  5514057 aaaattgtagtttttgtacttagggggccaaaattggaagtttttgaaagtt-agggggtaaaagtgcacttta 5513985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 18979145 - 18979218
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||||||||| || |||||| |||||||||||||||| |||| ||||| ||||||||||||||||||||    
T  18979145 aaaattgtagtttttatatttagggggccaaaattgcaagttgttgaaagttagggggggaaaagtgcacttta 18979218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 76
Target Start/End: Original strand, 1824103 - 1824174
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactt 76  Q
    |||||||||||||||||||||||||  |||||||||||||||||||| |||||  ||||||||| |||||||    
T  1824103 aaaattgtagtttttgtacttaggggaccaaaattgcaagtttttgaaagttagagggggaaaaatgcactt 1824174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 76
Target Start/End: Original strand, 1858548 - 1858619
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactt 76  Q
    |||||||||||||||||||||||||  |||||||||||||||||||| |||||  ||||||||| |||||||    
T  1858548 aaaattgtagtttttgtacttaggggaccaaaattgcaagtttttgaaagttagagggggaaaaatgcactt 1858619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 82
Target Start/End: Original strand, 8389712 - 8389791
Alignment:
Q  3 ctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacct 82  Q
    ||||||||||||||||||||| || ||  |||||||||||| ||||||| | ||||| ||||||||||||||||||||||    
T  8389712 ctaaaattgtagtttttgtacataagggaccaaaattgcaactttttgaaacttaagaggggaaaagtgcactttaacct 8389791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 12353396 - 12353462
Alignment:
Q  16 ttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 83  Q
    |||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||| ||||    
T  12353396 ttttgtacttagggggccaaaattgcaagtttttgaaagttaa-gggggaaaagtgcactttagcctt 12353462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 276
Target Start/End: Original strand, 19990429 - 19990536
Alignment:
Q  169 cattcattttacaaaattaagcctattcatgttgctttacctaatggtacatctgtcttagtttattatgctggtactgttagtttttcccctagttttc 268  Q
    ||||| |||||||||||||||| | ||| |||| ||||||||||||| |||||||| |||||| || ||||||| |||||||| || || || | |||||    
T  19990429 cattccttttacaaaattaagcatgttcctgttactttacctaatggcacatctgttttagttcatcatgctggaactgttagcttgtcacccaattttc 19990528  T
Q  269 atatcact 276  Q
    ||||||||    
T  19990529 atatcact 19990536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 83
Target Start/End: Original strand, 22221389 - 22221467
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 83  Q
    ||||||||||||||  ||||||||| | ||||||||||||||||||| ||||| ||| |||||||||||||||| ||||    
T  22221389 aaaattgtagttttaatacttagggggtcaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagcctt 22221467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 83
Target Start/End: Original strand, 22227731 - 22227809
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 83  Q
    ||||||||||||||  ||||||||| | ||||||||||||||||||| ||||| ||| |||||||||||||||| ||||    
T  22227731 aaaattgtagttttaatacttagggggtcaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagcctt 22227809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 1823627 - 1823550
Alignment:
Q  6 aaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 83  Q
    |||||||||||||||||||||| | | ||||||||||||||||| | ||||||||||| |||||| ||||||| ||||    
T  1823627 aaattgtagtttttgtacttagagggtcaaaattgcaagtttttaaaagttaagggggaaaaagtacactttagcctt 1823550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 1858072 - 1857995
Alignment:
Q  6 aaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 83  Q
    |||||||||||||||||||||| | | ||||||||||||||||| | ||||||||||| |||||| ||||||| ||||    
T  1858072 aaattgtagtttttgtacttagagggtcaaaattgcaagtttttaaaagttaagggggaaaaagtacactttagcctt 1857995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 10006420 - 10006347
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    |||||||| |||||  ||||||||| ||||||||||||||||||||| |||||  |||||||||||||||||||    
T  10006420 aaaattgttgttttgatacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcacttta 10006347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 72
Target Start/End: Complemental strand, 18970986 - 18970920
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgc 72  Q
    ||||||||||||||||||||||||| |||||||||| ||| |||||| |||| |||||||||||||||    
T  18970986 aaaattgtagtttttgtacttagggggccaaaattgaaagattttgaaagtt-aggggggaaaagtgc 18970920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 72
Target Start/End: Complemental strand, 18978095 - 18978029
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgc 72  Q
    ||||||||||||||||||||||||| |||||||||| ||| |||||| |||| |||||||||||||||    
T  18978095 aaaattgtagtttttgtacttagggggccaaaattgaaagattttgaaagtt-aggggggaaaagtgc 18978029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 83
Target Start/End: Original strand, 32207350 - 32207426
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 83  Q
    ||||||||||||||||||||||||| | |||||||||||||||||||  ||||  ||||| ||||||||||||| ||||    
T  32207350 aaaattgtagtttttgtacttagggcgtcaaaattgcaagtttttgaaggtta--ggggggaaagtgcactttagcctt 32207426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 76
Target Start/End: Original strand, 45114541 - 45114612
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactt 76  Q
    ||||||||||||| ||||| ||| || |||||||||||||||||||| ||||| ||| ||||||||||||||    
T  45114541 aaaattgtagtttgtgtacatagtgaaccaaaattgcaagtttttgaaagttaggggcggaaaagtgcactt 45114612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 11282084 - 11282007
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacct 82  Q
    ||||||||  ||||||||  ||||| ||||||||||||| ||||| | ||||||||||| ||||||||||||||||||    
T  11282084 aaaattgtcatttttgtatatagggggccaaaattgcaactttttaaaagttaagggggaaaaagtgcactttaacct 11282007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 11287852 - 11287779
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||||||| ||||||||| | ||||||||||||||||||| | ||||| ||| | ||||||||||||||    
T  11287852 aaaattgtagtttctgtacttagtgggccaaaattgcaagttttttaaagttaggggtgaaaaagtgcacttta 11287779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 248
Target Start/End: Original strand, 15756555 - 15756658
Alignment:
Q  145 atttgttcttctatgacattactccattcattttacaaaattaagcctattcatgttgctttacctaatggtacatctgtcttagtttattatgctggta 244  Q
    ||||| |||||| || | ||||| |||||||| || | |||||| ||| |||||||  ||||||||||||| |||||||| |||||  ||||||||||||    
T  15756555 atttgctcttctttgtctttacttcattcattctatataattaaacctcttcatgtcactttacctaatggcacatctgttttagtacattatgctggta 15756654  T
Q  245 ctgt 248  Q
    ||||    
T  15756655 ctgt 15756658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 24122960 - 24122886
Alignment:
Q  3 ctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    |||||||| |||||||||||||||||| | ||||||||||| ||||| | |||| ||||||||||| |||||||||    
T  24122960 ctaaaattatagtttttgtacttagggggtcaaaattgcaaattttttaaagtt-aggggggaaaaatgcacttta 24122886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 30336525 - 30336599
Alignment:
Q  4 taaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    |||||||||||||||||||||||||  || ||||||  |||||||||| ||||| ||||| | ||||||||||||    
T  30336525 taaaattgtagtttttgtacttaggaggctaaaattataagtttttgaaagttaggggggaagaagtgcacttta 30336599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 22220464 - 22220391
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||||||||| ||| ||||| | ||||||||||||| ||| | |||||  |||||||||||||||||||    
T  22220464 aaaattgtagtttttatacatagggggtcaaaattgcaagtattttaaagttagagggggaaaagtgcacttta 22220391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 78
Target Start/End: Complemental strand, 36249602 - 36249555
Alignment:
Q  31 gccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  36249602 gccaaaattgcaactttttgaaacttaaggggggaaaagtgcacttta 36249555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 24123919 - 24123981
Alignment:
Q  1 ggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggg 63  Q
    ||||||||||||| |||| ||||||| |  ||||||||||||||||||||| ||||| |||||    
T  24123919 ggctaaaattgtaattttagtacttaagaggccaaaattgcaagtttttgaaagttacggggg 24123981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 24483200 - 24483146
Alignment:
Q  24 ttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    |||||| ||||||||||||||||||||| | ||| | ||||||||||||||||||    
T  24483200 ttagggggccaaaattgcaagtttttgaaaattaggaggggaaaagtgcacttta 24483146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 29043474 - 29043401
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||||||||||||| ||||| | |||||| || | |||||||  |||||||| ||||||||| ||||||    
T  29043474 aaaattgtagtttttgtacatagggggtcaaaatcgcgactttttgaaggttaagggaggaaaagtgaacttta 29043401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 43661848 - 43661928
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaaccttaa 85  Q
    |||||| |||||||||||| ||| |    |||||||||| ||||||| ||||||||| |||||||||||||| | ||||||    
T  43661848 aaaattttagtttttgtacatagaggattaaaattgcaactttttgaaagttaagggtggaaaagtgcacttcagccttaa 43661928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 8388538 - 8388462
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 83  Q
    |||||| |||||||||||| ||||| || |||||||||| ||||| | |||||  ||||| ||||||||||||| ||||    
T  8388538 aaaattatagtttttgtacatagggggctaaaattgcaactttttaaaagtta--ggggggaaagtgcactttagcctt 8388462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 24488704 - 24488763
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaagggggg 64  Q
    |||||||| |||||  || |||||| ||||||||||||||||||||| ||||| ||||||    
T  24488704 aaaattgttgttttgatatttagggggccaaaattgcaagtttttgaaagttaggggggg 24488763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 83
Target Start/End: Original strand, 38980069 - 38980147
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 83  Q
    |||||||| |||||  ||| | ||| |||||||| ||||  |||||| ||||| |||||||||||||||||||| ||||    
T  38980069 aaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagcctt 38980147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 83
Target Start/End: Original strand, 39011166 - 39011244
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 83  Q
    |||||||| |||||  ||| | ||| |||||||| ||||  |||||| ||||| |||||||||||||||||||| ||||    
T  39011166 aaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagcctt 39011244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 11283234 - 11283307
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||  ||||| ||| ||||| || |||||| ||| ||||||| |||||||||||| ||| |||||||||    
T  11283234 aaaattgtcatttttatacatagggggctaaaattacaactttttgaaagttaagggggggaaaatgcacttta 11283307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 78
Target Start/End: Complemental strand, 11456694 - 11456641
Alignment:
Q  25 tagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||| ||||||||||||| ||||||| | ||| |||| |||||||||||||||    
T  11456694 tagggggccaaaattgcaaatttttgaaaattagggggagaaaagtgcacttta 11456641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 32968532 - 32968459
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    |||||||| |||||  ||| | ||| |||||||| ||||  |||||| ||||| ||||||||||||||||||||    
T  32968532 aaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcacttta 32968459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 38974871 - 38974798
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    |||||||| |||||  ||| | ||| |||||||| ||||  |||||| ||||| ||||||||||||||||||||    
T  38974871 aaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcacttta 38974798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 39005969 - 39005896
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    |||||||| |||||  ||| | ||| |||||||| ||||  |||||| ||||| ||||||||||||||||||||    
T  39005969 aaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcacttta 39005896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 11288914 - 11288958
Alignment:
Q  34 aaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    |||||||||||||||||| ||||| ||| | ||||||||||||||    
T  11288914 aaaattgcaagtttttgaaagttaggggtgaaaaagtgcacttta 11288958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 19564 - 19491
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||||||||| ||||||||| |||||||||||||| |||||| | |||||||||||||| |||||||||    
T  19564 aaaattgtagtttttatacttagggggccaaaattgcaaggttttgaaaattaaggggggaaaaatgcacttta 19491  T

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Target: scaffold0294 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 5463 - 5536
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    |||||||||||||||||||||| || | ||||||||||||||||||| | ||| ||||||||||||||||||||    
T  5463 aaaattgtagtttttgtacttaaggggtcaaaattgcaagtttttgaaaattagggggggaaaagtgcacttta 5536  T

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Target: scaffold0294; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 4519 - 4445
Alignment:
Q  4 taaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    |||||||||| |||||||||||| || || ||||||| |||||||||| | ||| ||||| ||| ||||||||||    
T  4519 taaaattgtaatttttgtacttaaggggctaaaattgtaagtttttgaaaattaggggggaaaatgtgcacttta 4445  T

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Target: scaffold0019 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 61484 - 61557
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    |||||| |||||||||||||||||| || |||||||||||||||||| | ||||||| ||||||||||||||||    
T  61484 aaaattatagtttttgtacttagggggctaaaattgcaagtttttgaaaattaagggaggaaaagtgcacttta 61557  T

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Target: scaffold0019; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 60166 - 60093
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||||||||| ||| ||||| | ||||||||||||||||| | |||||  || ||||||||||||||||    
T  60166 aaaattgtagtttttatacatagggggtcaaaattgcaagtttttaaaagttagaggaggaaaagtgcacttta 60093  T

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Target: scaffold2034 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold2034
Description:

Target: scaffold2034; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 309 - 236
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    |||||| |||||||||||| |||||  |||||||||||| ||||||| |||||||||||| |||||||||||||    
T  309 aaaattatagtttttgtacataggggaccaaaattgcaactttttgaaagttaagggggggaaagtgcacttta 236  T

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Target: scaffold0384 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 169 - 276
Target Start/End: Original strand, 1950 - 2057
Alignment:
Q  169 cattcattttacaaaattaagcctattcatgttgctttacctaatggtacatctgtcttagtttattatgctggtactgttagtttttcccctagttttc 268  Q
    ||||| |||||||||||||||| | ||| |||| ||||||| ||||| |||||||| |||||| || ||||||| |||| ||| ||||| || | |||||    
T  1950 cattccttttacaaaattaagcatgttcctgttactttaccaaatggcacatctgttttagttcatcatgctggaactgatagcttttcacccaattttc 2049  T
Q  269 atatcact 276  Q
    ||||||||    
T  2050 atatcact 2057  T

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Target: scaffold0586 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 6419 - 6342
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacct 82  Q
    ||||||||||||||||||| ||||| || ||||| | || ||||||| | ||||||| ||||||||||||||||||||    
T  6419 aaaattgtagtttttgtacatagggggctaaaatcgtaactttttgaaacttaagggcggaaaagtgcactttaacct 6342  T

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Target: scaffold0045 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 49109 - 49182
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||||||||  ||||||||  ||||||||||||||||||| | ||||||||| ||||||||||| ||||    
T  49109 aaaattgtagttttaatacttaggaggccaaaattgcaagtttttaaaagttaagggtggaaaagtgcaattta 49182  T

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Target: scaffold0632 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 3333 - 3405
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    |||||| |||||||||||| || || | |||||||| |||||||||| || |||||||||||||||||||||||    
T  3333 aaaattatagtttttgtacctatggggtcaaaattgtaagtttttgaaag-taaggggggaaaagtgcacttta 3405  T

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Target: scaffold0003 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 49458 - 49531
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||||||||| |   ||||| ||||||||||||| ||||| | |||||||||| |||||||||||||||    
T  49458 aaaattgtagtttttatttatagggggccaaaattgcaacttttttaaagttaaggggagaaaagtgcacttta 49531  T

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Target: scaffold0186 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 23152 - 23084
Alignment:
Q  8 attgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||| ||||| |||||||| | | ||||||||||||||||||| |||||  |||||||||||||||||||    
T  23152 attgttgttttggtacttagagggacaaaattgcaagtttttgaaagtta--gggggaaaagtgcacttta 23084  T

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Target: scaffold0186; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 23934 - 23988
Alignment:
Q  24 ttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    |||||||||||||||||||||||||||| ||||| || |  ||||||||||||||    
T  23934 ttagggagccaaaattgcaagtttttgaaagttagggagaaaaaagtgcacttta 23988  T

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Target: scaffold0093 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 2490 - 2562
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaag-tttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||| || |||||||||||||||| | |||||||||||| ||||||| |||||  |||||||||||||||||||    
T  2490 aaaatggttgtttttgtacttagggggtcaaaattgcaagttttttgaaagtta--gggggaaaagtgcacttta 2562  T

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Target: scaffold0093; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 7113 - 7185
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaag-tttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||| || |||||||||||||||| | |||||||||||| ||||||| |||||  |||||||||||||||||||    
T  7113 aaaatggttgtttttgtacttagggggtcaaaattgcaagttttttgaaagtta--gggggaaaagtgcacttta 7185  T

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Target: scaffold1303 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold1303
Description:

Target: scaffold1303; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 1515 - 1442
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    |||||| |||||||| ||| ||||| | ||||||||||||||||| | |||||  ||||||||||| |||||||    
T  1515 aaaattatagtttttatacatagggggtcaaaattgcaagttttttaaagttagagggggaaaagtacacttta 1442  T

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Target: scaffold0059 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 4755 - 4827
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||||||| |||| |||||| |||||||||||| |||||| | |||| |||| || |||||||||||||    
T  4755 aaaattgtagtttctgtatttagggggccaaaattgcatgtttttaaaagtt-agggagggaaagtgcacttta 4827  T

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Target: scaffold0059; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 3753 - 3699
Alignment:
Q  3 ctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagtta 57  Q
    |||||||| |||||| | |||| |||| ||||||||||||||||||||| |||||    
T  3753 ctaaaattatagtttctttactcagggggccaaaattgcaagtttttgaaagtta 3699  T

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Target: scaffold0321 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 18804 - 18731
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    ||||||||||||||||| | ||||  | |||||| |||| ||||| | ||||||| ||| ||||||||||||||    
T  18804 aaaattgtagtttttgttcataggaggtcaaaatcgcaactttttaaaagttaagagggaaaaagtgcacttta 18731  T

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Target: scaffold0227 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 144 - 217
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 78  Q
    |||||||| |||||  ||| | ||| |||||||| ||||  |||||| ||||| ||||||||||||||||||||    
T  144 aaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcacttta 217  T

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Target: scaffold0112 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 37223 - 37179
Alignment:
Q  5 aaaattgtagtttttgtacttagggagccaaaattgcaagttttt 49  Q
    |||||||| |||||||||||||||| | ||||||||||| |||||    
T  37223 aaaattgttgtttttgtacttagggggtcaaaattgcaaattttt 37179  T

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