View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4094-2.5-Insertion-6 (Length: 206)
Name: NF4094-2.5-Insertion-6
Description: NF4094-2-5
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4094-2.5-Insertion-6 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 174; Significance: 8e-94; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 174; E-Value: 8e-94
Query Start/End: Original strand, 8 - 206
Target Start/End: Original strand, 35258295 - 35258493
Alignment:
| Q |
8 |
tgtcaacactgaaaaatgtcatttcaatccactttaggccaaaacaaatacactgaaaattactaattttagcttcaaaacaaatnnnnnnnttaatcac |
107 |
Q |
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| T |
35258295 |
tgtcaacactgaaaaatgtcatttcaatccactttaggccaaaacaaatacactgaaaattactaattttagcttcaaaacaaataaaaaaattaatcac |
35258394 |
T |
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| Q |
108 |
cccttcattgcataaaggaacaaacaagcatatcatatgattcttttctaggtatattcttctcttaatacagaacatggttttaattagcaggctgta |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
35258395 |
cccttcattgcataaaggaacaaacaagcatatcatatgattcttttctaggtatatttttctcttaatacagaacatggttttaattagcaggctgta |
35258493 |
T |
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