View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4094_high_10 (Length: 445)

Name: NF4094_high_10
Description: NF4094
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4094_high_10
NF4094_high_10
[»] chr5 (48 HSPs)
chr5 (6-431)||(20222871-20223296)
chr5 (136-295)||(42086273-42086435)
chr5 (154-295)||(8513483-8513627)
chr5 (136-295)||(5731919-5732081)
chr5 (141-295)||(23247351-23247507)
chr5 (136-295)||(1538377-1538539)
chr5 (220-295)||(20255402-20255477)
chr5 (136-295)||(41163459-41163620)
chr5 (136-295)||(12704960-12705122)
chr5 (136-295)||(12766077-12766239)
chr5 (136-294)||(20525784-20525945)
chr5 (153-297)||(14588614-14588761)
chr5 (141-271)||(35813021-35813154)
chr5 (136-295)||(42861217-42861379)
chr5 (136-295)||(9812818-9812980)
chr5 (136-295)||(30349525-30349687)
chr5 (136-295)||(3653913-3654073)
chr5 (231-295)||(9805048-9805112)
chr5 (136-295)||(19572670-19572832)
chr5 (136-207)||(26077087-26077158)
chr5 (136-206)||(6767142-6767212)
chr5 (144-303)||(25417174-25417336)
chr5 (142-207)||(1898953-1899018)
chr5 (136-205)||(4016347-4016416)
chr5 (254-295)||(23383724-23383765)
chr5 (231-295)||(7616964-7617028)
chr5 (136-295)||(2485143-2485304)
chr5 (136-207)||(28856923-28856994)
chr5 (136-207)||(28857074-28857145)
chr5 (141-207)||(7308454-7308520)
chr5 (140-206)||(14152000-14152066)
chr5 (136-206)||(35403603-35403673)
chr5 (136-206)||(37263187-37263257)
chr5 (136-193)||(39728333-39728390)
chr5 (145-205)||(16755016-16755076)
chr5 (231-271)||(22655180-22655220)
chr5 (141-205)||(24498934-24498998)
chr5 (136-207)||(7866527-7866598)
chr5 (155-295)||(13664225-13664368)
chr5 (136-207)||(18136370-18136441)
chr5 (136-295)||(20682616-20682779)
chr5 (232-295)||(20692978-20693041)
chr5 (136-207)||(38297054-38297125)
chr5 (232-295)||(39099778-39099841)
chr5 (137-180)||(42292140-42292183)
chr5 (154-207)||(30995085-30995138)
chr5 (254-295)||(43399195-43399236)
chr5 (235-295)||(28857194-28857254)
[»] chr2 (48 HSPs)
chr2 (153-295)||(25540403-25540548)
chr2 (136-295)||(38005347-38005509)
chr2 (136-295)||(22593080-22593240)
chr2 (136-297)||(38962708-38962872)
chr2 (159-295)||(34346286-34346425)
chr2 (136-295)||(7747219-7747381)
chr2 (153-295)||(41220597-41220742)
chr2 (136-295)||(8410076-8410238)
chr2 (136-295)||(14169608-14169770)
chr2 (136-295)||(18902529-18902691)
chr2 (30-83)||(25330077-25330130)
chr2 (136-205)||(29422160-29422229)
chr2 (136-298)||(33005697-33005861)
chr2 (160-295)||(15234060-15234198)
chr2 (136-298)||(9360744-9360909)
chr2 (136-284)||(331446-331597)
chr2 (231-295)||(16325638-16325702)
chr2 (136-207)||(2550813-2550884)
chr2 (136-295)||(41031905-41032066)
chr2 (136-295)||(10026615-10026777)
chr2 (136-295)||(11069823-11069985)
chr2 (145-295)||(35946693-35946845)
chr2 (141-298)||(6358147-6358307)
chr2 (136-205)||(19976899-19976968)
chr2 (136-205)||(34356151-34356220)
chr2 (138-207)||(39806975-39807044)
chr2 (231-295)||(12864267-12864331)
chr2 (231-295)||(13104824-13104888)
chr2 (227-295)||(29421321-29421389)
chr2 (136-295)||(3643886-3644048)
chr2 (141-207)||(21286394-21286460)
chr2 (144-206)||(25549681-25549743)
chr2 (145-205)||(7787010-7787070)
chr2 (231-295)||(20116611-20116675)
chr2 (136-184)||(21180427-21180475)
chr2 (136-289)||(39201513-39201669)
chr2 (136-183)||(2528455-2528502)
chr2 (231-294)||(2784975-2785038)
chr2 (231-294)||(10046477-10046540)
chr2 (136-207)||(23500772-23500842)
chr2 (313-344)||(25330190-25330221)
chr2 (240-295)||(44023347-44023402)
chr2 (136-294)||(20612534-20612697)
chr2 (233-295)||(34738332-34738394)
chr2 (136-193)||(2149299-2149356)
chr2 (136-193)||(14853471-14853528)
chr2 (254-295)||(44548723-44548764)
chr2 (231-295)||(10106631-10106695)
[»] chr3 (50 HSPs)
chr3 (136-295)||(54261171-54261333)
chr3 (136-295)||(48341965-48342127)
chr3 (141-295)||(3136694-3136850)
chr3 (145-295)||(30767247-30767400)
chr3 (136-298)||(35315901-35316066)
chr3 (136-206)||(46529962-46530032)
chr3 (136-295)||(29127864-29128026)
chr3 (136-295)||(47749105-47749266)
chr3 (136-295)||(47471777-47471938)
chr3 (137-207)||(10043096-10043166)
chr3 (136-295)||(15320131-15320293)
chr3 (136-295)||(30045766-30045928)
chr3 (136-295)||(49543464-49543626)
chr3 (153-295)||(28572211-28572356)
chr3 (136-274)||(32873570-32873710)
chr3 (136-291)||(10040502-10040659)
chr3 (136-295)||(25294905-25295067)
chr3 (136-295)||(29135858-29136020)
chr3 (136-271)||(35923647-35923785)
chr3 (142-207)||(7613017-7613082)
chr3 (141-295)||(31072828-31072985)
chr3 (254-298)||(19147027-19147071)
chr3 (136-297)||(29762153-29762317)
chr3 (141-193)||(33560810-33560862)
chr3 (231-295)||(47219187-47219251)
chr3 (231-295)||(49021203-49021267)
chr3 (136-260)||(11687144-11687271)
chr3 (220-295)||(23511599-23511674)
chr3 (136-207)||(26207892-26207963)
chr3 (136-295)||(45877399-45877561)
chr3 (231-293)||(8362620-8362682)
chr3 (220-298)||(45450444-45450522)
chr3 (145-206)||(6462366-6462427)
chr3 (136-273)||(49198296-49198436)
chr3 (220-284)||(32522011-32522075)
chr3 (231-295)||(41630512-41630576)
chr3 (145-291)||(45402355-45402501)
chr3 (232-295)||(24506648-24506711)
chr3 (136-207)||(42412865-42412936)
chr3 (156-295)||(928565-928707)
chr3 (145-207)||(39849026-39849088)
chr3 (220-290)||(50405608-50405678)
chr3 (136-295)||(51060281-51060443)
chr3 (136-205)||(7650172-7650241)
chr3 (136-193)||(10855329-10855386)
chr3 (136-181)||(13893871-13893916)
chr3 (141-206)||(30735037-30735102)
chr3 (254-295)||(36043674-36043715)
chr3 (154-207)||(13167534-13167591)
chr3 (136-208)||(55069769-55069841)
[»] chr1 (47 HSPs)
chr1 (156-295)||(34719742-34719884)
chr1 (136-295)||(17642004-17642166)
chr1 (136-295)||(8763937-8764099)
chr1 (136-295)||(10422734-10422896)
chr1 (147-295)||(26325769-26325920)
chr1 (136-295)||(41663856-41664018)
chr1 (136-295)||(49078060-49078222)
chr1 (136-284)||(33418126-33418277)
chr1 (148-295)||(9659179-9659328)
chr1 (136-295)||(11397889-11398050)
chr1 (136-295)||(15238106-15238268)
chr1 (136-295)||(18915813-18915975)
chr1 (136-295)||(5855468-5855630)
chr1 (136-283)||(12036756-12036906)
chr1 (144-295)||(45361882-45362036)
chr1 (141-214)||(892381-892454)
chr1 (141-207)||(32822-32888)
chr1 (144-295)||(30927727-30927881)
chr1 (145-295)||(43959821-43959974)
chr1 (154-295)||(50503361-50503505)
chr1 (154-206)||(17358563-17358615)
chr1 (231-295)||(35211172-35211236)
chr1 (136-295)||(2980931-2981093)
chr1 (136-207)||(51437415-51437486)
chr1 (154-207)||(34334386-34334439)
chr1 (136-205)||(48798163-48798232)
chr1 (141-298)||(2567227-2567387)
chr1 (231-295)||(4581682-4581746)
chr1 (141-193)||(10173076-10173128)
chr1 (231-295)||(26660182-26660245)
chr1 (141-213)||(47312983-47313055)
chr1 (155-206)||(5063935-5063986)
chr1 (232-295)||(5504076-5504139)
chr1 (232-295)||(10172971-10173034)
chr1 (141-207)||(1764280-1764346)
chr1 (136-206)||(5503977-5504047)
chr1 (136-273)||(31152662-31152802)
chr1 (254-295)||(1764197-1764238)
chr1 (232-297)||(26258740-26258805)
chr1 (173-295)||(37339802-37339928)
chr1 (231-284)||(42710149-42710202)
chr1 (237-298)||(45726430-45726491)
chr1 (254-295)||(51437524-51437565)
chr1 (145-213)||(9853362-9853430)
chr1 (141-181)||(32151039-32151079)
chr1 (136-208)||(34877936-34878008)
chr1 (231-295)||(50094948-50095012)
[»] chr4 (44 HSPs)
chr4 (136-295)||(52950032-52950194)
chr4 (136-298)||(2559257-2559422)
chr4 (136-295)||(29895737-29895899)
chr4 (141-295)||(5472847-5473004)
chr4 (232-295)||(16450349-16450412)
chr4 (136-295)||(38165977-38166139)
chr4 (173-295)||(7246645-7246770)
chr4 (136-295)||(53599010-53599172)
chr4 (136-292)||(1940779-1940935)
chr4 (145-294)||(6032643-6032792)
chr4 (136-273)||(6779161-6779301)
chr4 (136-289)||(8888972-8889128)
chr4 (136-267)||(1446776-1446910)
chr4 (231-298)||(21429349-21429416)
chr4 (136-207)||(24166400-24166471)
chr4 (231-298)||(27248474-27248541)
chr4 (155-295)||(36145214-36145357)
chr4 (231-294)||(40780861-40780924)
chr4 (136-295)||(55920984-55921146)
chr4 (136-294)||(13073488-13073649)
chr4 (141-206)||(13552069-13552134)
chr4 (136-205)||(33647671-33647740)
chr4 (231-295)||(4738666-4738730)
chr4 (136-192)||(14567201-14567257)
chr4 (148-208)||(15840023-15840083)
chr4 (136-204)||(34667695-34667763)
chr4 (145-284)||(20421733-20421874)
chr4 (136-207)||(47078408-47078479)
chr4 (136-295)||(38075383-38075545)
chr4 (136-193)||(3574550-3574607)
chr4 (231-295)||(16645166-16645230)
chr4 (136-207)||(7000474-7000545)
chr4 (136-207)||(27531747-27531818)
chr4 (136-207)||(31588634-31588705)
chr4 (136-203)||(41339489-41339556)
chr4 (220-294)||(14859328-14859402)
chr4 (136-206)||(26480040-26480110)
chr4 (145-207)||(29588695-29588757)
chr4 (253-298)||(2686451-2686496)
chr4 (231-284)||(46108739-46108792)
chr4 (156-208)||(38168227-38168279)
chr4 (231-283)||(38841379-38841431)
chr4 (231-295)||(42722576-42722640)
chr4 (255-295)||(47682381-47682421)
[»] chr8 (35 HSPs)
chr8 (136-295)||(3418512-3418674)
chr8 (136-295)||(10927555-10927717)
chr8 (136-294)||(15884556-15884716)
chr8 (141-270)||(33401823-33401955)
chr8 (136-295)||(14846525-14846686)
chr8 (136-295)||(43027254-43027416)
chr8 (145-295)||(17981399-17981552)
chr8 (136-295)||(45521118-45521279)
chr8 (136-207)||(6100421-6100492)
chr8 (136-295)||(10535403-10535564)
chr8 (136-295)||(14666070-14666232)
chr8 (141-294)||(4479296-4479451)
chr8 (136-207)||(34846763-34846833)
chr8 (136-207)||(38922504-38922575)
chr8 (136-214)||(44893361-44893439)
chr8 (136-295)||(2467117-2467279)
chr8 (136-295)||(8141051-8141213)
chr8 (136-206)||(13085473-13085543)
chr8 (136-295)||(24837191-24837353)
chr8 (136-205)||(9395910-9395979)
chr8 (136-213)||(22810029-22810106)
chr8 (236-284)||(3567956-3568004)
chr8 (231-295)||(11298266-11298330)
chr8 (136-207)||(1013067-1013138)
chr8 (220-295)||(18374046-18374121)
chr8 (136-207)||(34613868-34613939)
chr8 (148-194)||(7673757-7673803)
chr8 (254-291)||(4772054-4772091)
chr8 (136-205)||(6940507-6940576)
chr8 (158-207)||(11785887-11785936)
chr8 (145-182)||(35496369-35496406)
chr8 (254-298)||(2209853-2209897)
chr8 (231-295)||(3692880-3692944)
chr8 (136-180)||(18091350-18091394)
chr8 (254-298)||(23895638-23895682)
[»] chr7 (37 HSPs)
chr7 (136-295)||(48804631-48804793)
chr7 (173-298)||(38578863-38578991)
chr7 (136-295)||(13095806-13095968)
chr7 (136-207)||(22268119-22268190)
chr7 (136-295)||(8734685-8734847)
chr7 (153-295)||(10047875-10048020)
chr7 (136-302)||(27875080-27875248)
chr7 (146-293)||(18785627-18785777)
chr7 (136-295)||(22973915-22974077)
chr7 (136-295)||(3353373-3353534)
chr7 (136-207)||(19914792-19914863)
chr7 (148-207)||(21530708-21530767)
chr7 (136-207)||(22993457-22993528)
chr7 (136-207)||(43925460-43925531)
chr7 (136-207)||(47341824-47341895)
chr7 (136-295)||(34659174-34659336)
chr7 (136-295)||(43861971-43862133)
chr7 (141-206)||(9685692-9685757)
chr7 (136-297)||(27028227-27028391)
chr7 (254-295)||(28744231-28744272)
chr7 (136-205)||(14650265-14650334)
chr7 (231-284)||(41267934-41267987)
chr7 (141-205)||(24969416-24969480)
chr7 (136-207)||(34127710-34127781)
chr7 (145-207)||(1797417-1797479)
chr7 (141-207)||(42032049-42032115)
chr7 (136-206)||(43346870-43346940)
chr7 (141-194)||(23658133-23658185)
chr7 (136-294)||(26423288-26423448)
chr7 (136-193)||(39420786-39420843)
chr7 (231-284)||(45697200-45697253)
chr7 (231-295)||(5069814-5069878)
chr7 (141-205)||(5069907-5069971)
chr7 (146-206)||(16802081-16802141)
chr7 (231-295)||(41945519-41945583)
chr7 (141-193)||(46414628-46414680)
chr7 (231-295)||(48551903-48551967)
[»] chr6 (31 HSPs)
chr6 (136-295)||(5253222-5253384)
chr6 (141-207)||(9147255-9147321)
chr6 (136-298)||(9179732-9179897)
chr6 (136-298)||(29333135-29333299)
chr6 (145-295)||(13036003-13036156)
chr6 (136-295)||(19089447-19089609)
chr6 (136-295)||(6606096-6606258)
chr6 (136-295)||(8611973-8612135)
chr6 (136-298)||(8938660-8938825)
chr6 (136-295)||(21898597-21898759)
chr6 (136-207)||(3030708-3030779)
chr6 (232-294)||(8149797-8149859)
chr6 (141-284)||(34954629-34954774)
chr6 (145-295)||(29444764-29444917)
chr6 (220-294)||(11142639-11142713)
chr6 (231-295)||(14783419-14783483)
chr6 (136-208)||(17114986-17115058)
chr6 (136-208)||(21016840-21016912)
chr6 (136-207)||(24671956-24672027)
chr6 (136-206)||(15643920-15643989)
chr6 (254-295)||(3601154-3601195)
chr6 (231-295)||(5029864-5029928)
chr6 (231-295)||(9633624-9633688)
chr6 (231-295)||(31129224-31129288)
chr6 (136-207)||(5759577-5759648)
chr6 (136-207)||(6600714-6600784)
chr6 (136-207)||(14107448-14107519)
chr6 (136-183)||(19230671-19230718)
chr6 (136-206)||(2271392-2271462)
chr6 (254-295)||(30788852-30788893)
chr6 (145-205)||(26476455-26476515)
[»] scaffold0002 (3 HSPs)
scaffold0002 (136-295)||(518-680)
scaffold0002 (148-295)||(319382-319532)
scaffold0002 (154-207)||(139397-139454)
[»] scaffold0384 (1 HSPs)
scaffold0384 (154-284)||(5939-6071)
[»] scaffold0316 (1 HSPs)
scaffold0316 (154-295)||(1613-1757)
[»] scaffold0006 (1 HSPs)
scaffold0006 (136-292)||(68465-68621)
[»] scaffold0079 (1 HSPs)
scaffold0079 (254-295)||(8232-8273)
[»] scaffold0016 (2 HSPs)
scaffold0016 (254-295)||(8700-8741)
scaffold0016 (136-182)||(8825-8871)
[»] scaffold0009 (3 HSPs)
scaffold0009 (153-295)||(42831-42976)
scaffold0009 (238-294)||(9495-9551)
scaffold0009 (159-207)||(9407-9455)
[»] scaffold0005 (2 HSPs)
scaffold0005 (136-192)||(250118-250174)
scaffold0005 (155-207)||(271164-271216)
[»] scaffold0029 (1 HSPs)
scaffold0029 (136-206)||(40992-41062)
[»] scaffold0332 (1 HSPs)
scaffold0332 (141-205)||(15284-15348)
[»] scaffold0291 (1 HSPs)
scaffold0291 (231-295)||(6901-6965)
[»] scaffold0041 (1 HSPs)
scaffold0041 (238-298)||(25138-25198)
[»] scaffold0011 (1 HSPs)
scaffold0011 (254-295)||(224386-224427)
[»] scaffold0635 (1 HSPs)
scaffold0635 (231-295)||(2089-2153)
[»] scaffold0010 (1 HSPs)
scaffold0010 (231-295)||(155710-155774)
[»] scaffold0004 (1 HSPs)
scaffold0004 (231-295)||(7834-7898)


Alignment Details
Target: chr5 (Bit Score: 217; Significance: 1e-119; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 6 - 431
Target Start/End: Original strand, 20222871 - 20223296
Alignment:
Q  6 acatcatcaacatcacattcattgtcactcatgaaatattactgcctcaagtagagtaattcttcactaccatgattatacattttttctttt--ggaat 103  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||    
T  20222871 acatcatcaacataacattcattgtcactcatgaaatattactgcctcaagtagagtaattcttcactaccatgattatacatttttttttttttggaat 20222970  T
Q  104 agcatggtcaagcnnnnnnnnnnnnnnnnnnnccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcga 203  Q
    |||||||||||||                   ||||||| ||||| ||| ||||||||||||||| || ||| |||||| ||||||||||| ||||||||    
T  20222971 agcatggtcaagcaaaacaaaaacaaaaaaa-ccaaattatttggactgtagtggcaaggagctccttccaaagacgtatctggggaatatcgggttcga 20223069  T
Q  204 ttccttggggggaacattgaccggtgagcatgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaagaaagaaag 303  Q
    |||| |||||||||||||| || |||| |||||||||| |||| ||||||||||||||||||||||| |||||||||||||   ||||||| ||||||||    
T  20223070 ttccctggggggaacattggccagtgaacatgcctctaggcatgagtcaaattagtcgtccacctttagtaggtcggaaaccattgcgaaaaaaagaaag 20223169  T
Q  304 nnnnnnnggaatggccacgtcatggaaatttgctttaaaacatgaccacaacttcttcatcaagccagaactagaaagtccaattctaacttaagaaacc 403  Q
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |    
T  20223170 acaaaaaggaatggccacgtcatggaaatttgctttaaaacatgaccacaacttcttcatcaagccagaactagaaagtccaattctaac-taagaaaac 20223268  T
Q  404 caagnnnnnnntggatgtagagaaagtg 431  Q
    ||||       |||||||||||||||||    
T  20223269 caagaaaaaaatggatgtagagaaagtg 20223296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 136 - 295
Target Start/End: Original strand, 42086273 - 42086435
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgag 231  Q
    |||| ||| ||||||| | |||||||||||||| || |||||||||||| | ||||||  ||||||||||||  ||||| ||||    |||||| ||| |    
T  42086273 ccaagttgcttgggctccggtggcaaggagctccttccaaggacgtacccgaggaataccgggttcgattcccaggggg-aacaacgcttgaccagtgcg 42086371  T
Q  232 catgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    ||||||||||||||| || |  |||||||||||||||||||| |||||||||| ||||||||||    
T  42086372 catgcctctacgcatgagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 42086435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 8513483 - 8513627
Alignment:
Q  154 agtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgagcatgcctctacgcattag 249  Q
    ||||||||||||||| || |||||||||||| ||||||||  ||||||||||||| ||||  ||||    ||| || |||  ||||||||||||||  ||    
T  8513483 agtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcctagggga-aacaatgcttggccagtgcacatgcctctacgcacgag 8513581  T
Q  250 tcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
     || |||||||||||||||||||| |||||||||| ||||||||||    
T  8513582 ccagattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 8513627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 136 - 295
Target Start/End: Complemental strand, 5732081 - 5731919
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgag 231  Q
    |||| ||| ||||||| |||||||||||||||| || |||||||||||| ||||||||  ||||||||||||   || ||||||    ||| || ||| |    
T  5732081 ccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcc-caggaggaacaacgcttggccagtgcg 5731983  T
Q  232 catgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||||||| || || || ||||||||| ||||||| || |||||||||| ||||||||||    
T  5731982 catgcctctacgtatgagccagattagtcgttcacctttagtgggtcggaaaccggtgcgaaag 5731919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 295
Target Start/End: Complemental strand, 23247507 - 23247351
Alignment:
Q  141 ttgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgagcatgc 236  Q
    |||||||| || |||| |||||||||||||| |||||||||||||||||||||| ||||||||||||   || ||||||    |||| | ||  ||||||    
T  23247507 ttgtttggacttcagtagcaaggagctcattccaaggacgtacctggggaatatcgggttcgattcc-caggaggaacaacgcttgatcagtatgcatgc 23247409  T
Q  237 ctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||||  || || |||||||||||||||||| | ||||| |||| ||||||||||    
T  23247408 ctctacgcacgagccagattagtcgtccacctttgat-ggtcgaaaaccggtgcgaaag 23247351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 136 - 295
Target Start/End: Original strand, 1538377 - 1538539
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttgggggga--aca-ttgaccggtgagc 232  Q
    |||| ||||||||||| |||||||||||||||| || | ||||||||   ||||||||  ||||||||||||  ||||| |  ||| ||| || ||| ||    
T  1538377 ccaagttgtttgggctccagtggcaaggagctccttccgaggacgtattcggggaataccgggttcgattcccagggggaacaacacttggccagtgcgc 1538476  T
Q  233 atgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||||||||| || |  |||| ||||||||| ||||| |||||||||| ||||||||||    
T  1538477 atgcctctacgcatgagccggattaatcgtccaccattggtgggtcggaaaccggtgcgaaag 1538539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 220 - 295
Target Start/End: Original strand, 20255402 - 20255477
Alignment:
Q  220 ttgaccggtgagcatgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||| ||| |||||||||||||||| ||||  ||||||||||||||||||||  ||||||||||||||||||||    
T  20255402 ttgaccagtgcgcatgcctctacgcatgagtcggattagtcgtccacctttggtgagtcggaaactggtgcgaaag 20255477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 136 - 295
Target Start/End: Complemental strand, 41163620 - 41163459
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgag 231  Q
    |||| ||||||||||| |||||||||||||||| || |||| ||||||| ||||||||  ||||||||||||    ||||||||    ||| || |||      
T  41163620 ccaagttgtttgggctccagtggcaaggagctccttccaagaacgtacccggggaataccgggttcgattcc--caggggaacaacgtttggccagtgca 41163523  T
Q  232 catgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||| |||||||||| ||    ||||||||||||||||| || |||||||||||||||||||||    
T  41163522 catgtctctacgcatgagctggattagtcgtccaccttttgtgggtcggaaactggtgcgaaag 41163459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 136 - 295
Target Start/End: Original strand, 12704960 - 12705122
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgag 231  Q
    |||| |||||||| || |||||||||||||||| || |||||||||||| ||||||||  ||||||||||||   || ||||||    |||||| ||| |    
T  12704960 ccaagttgtttggactccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcc-gaggaggaacaacgcttgaccagtgtg 12705058  T
Q  232 catgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    ||||| ||||||||| |  |  |||||||| ||||||||||| |||| ||||| ||||||||||    
T  12705059 catgcttctacgcatgaaccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaag 12705122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 136 - 295
Target Start/End: Original strand, 12766077 - 12766239
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgag 231  Q
    |||| |||||||| ||  ||||||||||||||| || |||||||||||| ||||||||  |||||||||| ||  || ||||||    ||| || ||| |    
T  12766077 ccaagttgtttggactcgagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgatt-ctgaggaggaacaatgcttggccagtgtg 12766175  T
Q  232 catgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    ||||||||||||||| |  || |||||||| ||||||||||| |||| ||||| ||||||||||    
T  12766176 catgcctctacgcatgaaccagattagtcgcccacctttggtgggtcagaaaccggtgcgaaag 12766239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 136 - 294
Target Start/End: Original strand, 20525784 - 20525945
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggg--gaaca-ttgaccggtgagc 232  Q
    |||| ||| ||||||| |||||||||||||||| ||||||||| ||| | ||||||||| ||||||||||||  || ||   |||| ||  || ||| ||    
T  20525784 ccaagttgcttgggctccagtggcaaggagctcctttcaaggatgtatccggggaatatcgggttcgattcccaggtggaacaacacttcgccagtgcgc 20525883  T
Q  233 atgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaa 294  Q
    |||||||||||||| || |  |||||||||||||| ||||| | |||||||| |||||||||    
T  20525884 atgcctctacgcatgagccggattagtcgtccaccattggtggatcggaaaccggtgcgaaa 20525945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 153 - 297
Target Start/End: Complemental strand, 14588761 - 14588614
Alignment:
Q  153 cagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgagcatgcctctacgcatta 248  Q
    |||||||||||||||  ||||||||||||| ||||||||||| ||||||||||  |  || |||| |    |||||| ||| |||||||||||||||| |    
T  14588761 cagtggcaaggagcttctttcaaggacgtatctggggaatatcgggttcgatt-ttcaggaggaataacgcttgaccagtgcgcatgcctctacgcatga 14588663  T
Q  249 gtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaagaa 297  Q
    | |  ||||||||||||||||||||  | || |||| ||||||||||||    
T  14588662 gccggattagtcgtccacctttggtgagccgaaaaccggtgcgaaagaa 14588614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 141 - 271
Target Start/End: Complemental strand, 35813154 - 35813021
Alignment:
Q  141 ttgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca---ttgaccggtgagcatgcc 237  Q
    ||||||||||||| |||||||| |||||||| |||||||||||| | ||||||  ||||||||||||| ||||  |  |   |||||| ||| ||||| |    
T  35813154 ttgtttgggctgcggtggcaagaagctcattccaaggacgtacccgaggaataccgggttcgattcctaggggaaataatgcttgaccagtgcgcatgtc 35813055  T
Q  238 tctacgcattagtcaaattagtcgtccacctttg 271  Q
    ||||| ||| ||||  ||||||||||||||||||    
T  35813054 tctacacatgagtcggattagtcgtccacctttg 35813021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 136 - 295
Target Start/End: Complemental strand, 42861379 - 42861217
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgatt--ccttggggggaaca-ttgaccggtgagc 232  Q
    |||||||||||||||| ||||||||||||||||||| ||||||| || | ||||||||| |||||| |||  ||  ||    |||| ||| || ||| ||    
T  42861379 ccaaattgtttgggctccagtggcaaggagctcattccaaggacatatccggggaatatcgggttcaatttcccagggaaacaacacttggccagtgcgc 42861280  T
Q  233 atgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||||||||| || |  |||| ||||||||| ||||| ||||||| || ||||||||||    
T  42861279 atgcctctacgcatgagccggattaatcgtccaccattggtgggtcggagaccggtgcgaaag 42861217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 136 - 295
Target Start/End: Original strand, 9812818 - 9812980
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgag 231  Q
    |||| |||||||| || |||||||||||||||| || |||||||||||| ||||||||  ||||||||||||   || ||||||    ||| || ||| |    
T  9812818 ccaagttgtttggactccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcc-gaggaggaacaacgcttggccagtgtg 9812916  T
Q  232 catgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    ||||| ||||||||| |  |  |||||||| ||||||||||| |||| ||||| ||||||||||    
T  9812917 catgcttctacgcatgaaccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaag 9812980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 136 - 295
Target Start/End: Original strand, 30349525 - 30349687
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaac----attgaccggtgag 231  Q
    |||| ||||||||||| ||||||||||||| || || |||||||||| | ||||||||  ||||| |||| | | ||||||||    |||| || ||| |    
T  30349525 ccaagttgtttgggctccagtggcaaggagttccttccaaggacgtatccggggaataccgggtttgatttc-tagggggaacaatgattggccagtgcg 30349623  T
Q  232 catgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||||| |||| ||   ||||||||||||||||| ||| || ||||||| ||||||||||    
T  30349624 catgcctctatgcatgagctgaattagtcgtccaccttaggtgggccggaaaccggtgcgaaag 30349687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 136 - 295
Target Start/End: Complemental strand, 3654073 - 3653913
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaac-attgaccggtgagcat 234  Q
    |||| ||||||||||| ||||| ||| |||||| || |||||||||||| || |||||  ||||||||||||| | |   |||  |||||| ||| ||||    
T  3654073 ccaagttgtttgggctccagtgacaatgagctctttccaaggacgtacccggagaataccgggttcgattcctagagaacaacgcttgaccagtgcgcat 3653974  T
Q  235 gcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||||||  || |  |||||||||||||||||||| | ||| |||| ||||| ||||    
T  3653973 gcctctacgcacgaggcggattagtcgtccacctttggtggatcgaaaaccggtgcaaaag 3653913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 231 - 295
Target Start/End: Original strand, 9805048 - 9805112
Alignment:
Q  231 gcatgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||||||||||| || |  |||||||||||||||||||| |||||||||| ||||||||||    
T  9805048 gcatgcctctacgcatgagccggattagtcgtccacctttggtgggtcggaaacaggtgcgaaag 9805112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 136 - 295
Target Start/End: Original strand, 19572670 - 19572832
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggg--gaaca-ttgaccggtgagc 232  Q
    |||| ||| ||||||| |||||||||||||||| || |||||||||| | ||||||||  ||||| ||||||  |||||   |||| ||| || ||| ||    
T  19572670 ccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttagattcccagggggaacaacacttggccagtgcgc 19572769  T
Q  233 atgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||||||||| || |  ||||||||| |||| ||||| ||| ||||||  |||||||||    
T  19572770 atgcctctacgcatgagccggattagtcgttcaccattggtgggttggaaaccagtgcgaaag 19572832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 136 - 207
Target Start/End: Original strand, 26077087 - 26077158
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 207  Q
    |||| ||||||||||| |||||| |||||||||||| ||||||||||  ||||||||| | |||||||||||    
T  26077087 ccaagttgtttgggctccagtggtaaggagctcattccaaggacgtatttggggaatactaggttcgattcc 26077158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 136 - 206
Target Start/End: Complemental strand, 6767212 - 6767142
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattc 206  Q
    |||| ||| ||||||| |||||||||||||||| || |||||||||||| ||||||||  |||||||||||    
T  6767212 ccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattc 6767142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 144 - 303
Target Start/End: Complemental strand, 25417336 - 25417174
Alignment:
Q  144 tttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgagcatgcctc 239  Q
    |||||||| |||||||||||||||| || |||||||||||  ||||||||  ||||||||||||   |||||||||    ||| || ||| |||||||||    
T  25417336 tttgggctccagtggcaaggagctccttccaaggacgtactcggggaataccgggttcgattcc-cagggggaacaacgcttggccagtgcgcatgcctc 25417238  T
Q  240 tacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaagaaagaaag 303  Q
    |||| |  || |  ||||||| |  ||| ||||| |||| ||||| ||||||||||||||||||    
T  25417237 tacgaacgagccggattagtcatttaccattggtgggtcagaaaccggtgcgaaagaaagaaag 25417174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 142 - 207
Target Start/End: Original strand, 1898953 - 1899018
Alignment:
Q  142 tgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 207  Q
    |||||||||| |||||||||||||||| || |||||| ||||| ||||||||  ||||||||||||    
T  1898953 tgtttgggctacagtggcaaggagctccttccaaggatgtacccggggaataccgggttcgattcc 1899018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 136 - 205
Target Start/End: Complemental strand, 4016416 - 4016347
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgatt 205  Q
    |||| |||| |||||| |||||||||| |||||||| |||||||||||||| | ||||| ||||||||||    
T  4016416 ccaagttgtatgggctccagtggcaagaagctcattccaaggacgtacctgagaaatatcgggttcgatt 4016347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 254 - 295
Target Start/End: Original strand, 23383724 - 23383765
Alignment:
Q  254 attagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  23383724 attagtcgtccacctttggtgggtcggaaactggtgcgaaag 23383765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 231 - 295
Target Start/End: Original strand, 7616964 - 7617028
Alignment:
Q  231 gcatgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||||||||||| ||||| ||||||||||||   ||||| | |||||||||||||||||||    
T  7616964 gcatgcctctacgcatgagtcagattagtcgtccattattggtggatcggaaactggtgcgaaag 7617028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 136 - 295
Target Start/End: Original strand, 2485143 - 2485304
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgag 231  Q
    |||| |||||||| || || |||||||||||||||| ||||||||||    ||||||| ||||||||||||||   ||||||||    | | || ||| |    
T  2485143 ccaagttgtttggactccaatggcaaggagctcattccaaggacgtattcagggaatactgggttcgattcct--aggggaacaaccctgggcctgtgcg 2485240  T
Q  232 catgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||||||| || ||||  ||||||||  |||||||| | |||||||||| | ||||||||    
T  2485241 catgcctctacgtatgagtcggattagtcgctcacctttgatgggtcggaaaccgatgcgaaag 2485304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 136 - 207
Target Start/End: Original strand, 28856923 - 28856994
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 207  Q
    |||| ||| ||||||| |||||||||||||||| || |||||||| ||| ||||||||  ||||||||||||    
T  28856923 ccaagttgcttgggctccagtggcaaggagctccttccaaggacgcacccggggaataccgggttcgattcc 28856994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 136 - 207
Target Start/End: Original strand, 28857074 - 28857145
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 207  Q
    |||| ||| ||||||| |||||||||||||||| || |||||||| ||| ||||||||  ||||||||||||    
T  28857074 ccaagttgcttgggctccagtggcaaggagctccttccaaggacgcacccggggaataccgggttcgattcc 28857145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 141 - 207
Target Start/End: Complemental strand, 7308520 - 7308454
Alignment:
Q  141 ttgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 207  Q
    ||||||||| |  |||||||||||||||||| ||||||||||  || ||||||| ||||||||||||    
T  7308520 ttgtttgggttctagtggcaaggagctcattccaaggacgtatttgaggaatatcgggttcgattcc 7308454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 140 - 206
Target Start/End: Original strand, 14152000 - 14152066
Alignment:
Q  140 attgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattc 206  Q
    ||||||| |||| |||||||||||||||| || ||| || ||||||||||||||  |||||||||||    
T  14152000 attgtttcggctccagtggcaaggagctccttccaatgatgtacctggggaataccgggttcgattc 14152066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 136 - 206
Target Start/End: Complemental strand, 35403673 - 35403603
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattc 206  Q
    |||| ||||||||||| |||||||||||||||| || |||||||||||  ||| ||||  |||||||||||    
T  35403673 ccaacttgtttgggctccagtggcaaggagctccttccaaggacgtactcgggaaataccgggttcgattc 35403603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 136 - 206
Target Start/End: Original strand, 37263187 - 37263257
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattc 206  Q
    |||| ||| ||||||| ||||||||||||| || ||  ||||||||||| ||||||||| |||||||||||    
T  37263187 ccaagttgcttgggctccagtggcaaggagttccttctaaggacgtacccggggaatatcgggttcgattc 37263257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 136 - 193
Target Start/End: Original strand, 39728333 - 39728390
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaata 193  Q
    |||| ||||||||||| |||||||||||||||| || |||| ||||||| ||||||||    
T  39728333 ccaagttgtttgggctccagtggcaaggagctctttccaagaacgtacccggggaata 39728390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 145 - 205
Target Start/End: Original strand, 16755016 - 16755076
Alignment:
Q  145 ttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgatt 205  Q
    ||||||| |||||||||||||||| || ||| |||||| | |||||||| |||||||||||    
T  16755016 ttgggcttcagtggcaaggagctctttccaaagacgtatccggggaatactgggttcgatt 16755076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 22655220 - 22655180
Alignment:
Q  231 gcatgcctctacgcattagtcaaattagtcgtccacctttg 271  Q
    |||||||||||||||| ||||| ||||||||||||||||||    
T  22655220 gcatgcctctacgcataagtcagattagtcgtccacctttg 22655180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 141 - 205
Target Start/End: Original strand, 24498934 - 24498998
Alignment:
Q  141 ttgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgatt 205  Q
    |||||||||||  ||| ||||||||||| || |||||||||| |||| |||||| ||||||||||    
T  24498934 ttgtttgggctctagtagcaaggagctccttccaaggacgtatctggagaatatcgggttcgatt 24498998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 207
Target Start/End: Original strand, 7866527 - 7866598
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 207  Q
    |||| ||| |||| || |||||||||||||||| || |||||||||||| | ||||||  ||||||||||||    
T  7866527 ccaagttgcttggactccagtggcaaggagctccttccaaggacgtacccgaggaataccgggttcgattcc 7866598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 295
Target Start/End: Original strand, 13664225 - 13664368
Alignment:
Q  155 gtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgagcatgcctctacgcattagt 250  Q
    |||||||||||||| || |||||||||| || |||||||  || |||||||  |  |||||||||    ||| || ||| |||||||||||||||| ||     
T  13664225 gtggcaaggagctccttccaaggacgtatctagggaataccggattcgatta-tcagggggaacaacacttggccagtgcgcatgcctctacgcatgagc 13664323  T
Q  251 caaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    || |||| |||  ||||||||||  ||||||||| ||||||||||    
T  13664324 cagattaatcgatcacctttggtgtgtcggaaaccggtgcgaaag 13664368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 207
Target Start/End: Complemental strand, 18136441 - 18136370
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 207  Q
    |||| ||||||||||| |||||||||||||||| || ||| |||||| | || |||||  ||||||||||||    
T  18136441 ccaagttgtttgggctccagtggcaaggagctccttccaaagacgtatccggagaataccgggttcgattcc 18136370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 295
Target Start/End: Complemental strand, 20682779 - 20682616
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttc-aaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtga 230  Q
    |||| ||| ||||||| ||||| ||||||||||  ||| ||||||||||| ||||||||||||||| |||| |   |||||||||    ||| || |||     
T  20682779 ccaagttgcttgggctccagtgacaaggagctccattctaaggacgtacccggggaatattgggttagatttc-cagggggaacaacgcttggccagtgc 20682681  T
Q  231 gcatgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||||||||||  || |  |||| ||| |||||||| || ||| |||||| ||||||||||    
T  20682680 gcatgcctctacgcacgagccggattaatcgaccacctttagtgggttggaaaccggtgcgaaag 20682616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 295
Target Start/End: Original strand, 20692978 - 20693041
Alignment:
Q  232 catgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||||  |||| | ||| |||||| ||||||||||||| |||||||||| ||||||||||    
T  20692978 catgcctctgtgcatgattcagattagttgtccacctttggtgggtcggaaaccggtgcgaaag 20693041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 207
Target Start/End: Complemental strand, 38297125 - 38297054
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 207  Q
    |||||||||||||||| |||||||||||||||| ||  ||||| |||| || ||||||  |||||| |||||    
T  38297125 ccaaattgtttgggctccagtggcaaggagctccttctaaggatgtacttgaggaataccgggttcaattcc 38297054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 39099841 - 39099778
Alignment:
Q  232 catgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    ||||||||||||||| || |  |||||||| ||||||||||| |||||||||| ||||| ||||    
T  39099841 catgcctctacgcatgagccggattagtcgcccacctttggtgggtcggaaaccggtgcaaaag 39099778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 137 - 180
Target Start/End: Complemental strand, 42292183 - 42292140
Alignment:
Q  137 caaattgtttgggctgcagtggcaaggagctcatttcaaggacg 180  Q
    ||||||||||||||| ||||||||||||||||||| ||| ||||    
T  42292183 caaattgtttgggctccagtggcaaggagctcattccaaagacg 42292140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 207
Target Start/End: Original strand, 30995085 - 30995138
Alignment:
Q  154 agtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 207  Q
    ||||||||||||||| || ||||||||||| |||||||||   |||||||||||    
T  30995085 agtggcaaggagctccttccaaggacgtacatggggaataccaggttcgattcc 30995138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 295
Target Start/End: Original strand, 43399195 - 43399236
Alignment:
Q  254 attagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    ||||||||||||| |||||| |||||||||| ||||||||||    
T  43399195 attagtcgtccacatttggttggtcggaaaccggtgcgaaag 43399236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 235 - 295
Target Start/End: Original strand, 28857194 - 28857254
Alignment:
Q  235 gcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||||||| || |  ||||||||  |||||||||| |||||||||| ||||||||||    
T  28857194 gcctctacgcatgagccggattagtcgctcacctttggtgggtcggaaaccggtgcgaaag 28857254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 66; Significance: 5e-29; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 153 - 295
Target Start/End: Complemental strand, 25540548 - 25540403
Alignment:
Q  153 cagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgagcatgcctctacgcatta 248  Q
    ||||||||||||||||||| |||||||||| |||||||||| |||||||||||||| ||||| ||||    ||| || ||| |||||||||||||||  |    
T  25540548 cagtggcaaggagctcattccaaggacgtatctggggaatactgggttcgattcctaggggg-aacaacgcttggccagtgcgcatgcctctacgcacga 25540450  T
Q  249 gtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    | |  |||||||||||||||||||| |||||||||| ||||||||||    
T  25540449 gccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 25540403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 136 - 295
Target Start/End: Original strand, 38005347 - 38005509
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgag 231  Q
    |||| ||||||||||| |||||||||||||||| || |||||||||||| |||||||| |||||||||||||    ||||||||    ||| || ||| |    
T  38005347 ccaagttgtttgggctccagtggcaaggagctccttccaaggacgtacccggggaatactgggttcgattcc-caaggggaacaacgcttggccagtgcg 38005445  T
Q  232 catgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    ||||||||||| ||| || |  |||||||| ||||||||||| | |||||||||||||||||||    
T  38005446 catgcctctacacatgagccggattagtcgcccacctttggtggatcggaaactggtgcgaaag 38005509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 136 - 295
Target Start/End: Original strand, 22593080 - 22593240
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggg--gaacattgaccggtgagca 233  Q
    |||| ||| ||| ||| |||||||||||||||| || |||||||||||| |||||||| || ||||||||||  |||||   ||| ||| || ||| |||    
T  22593080 ccaagttgcttgtgctccagtggcaaggagctccttccaaggacgtacccggggaatactgagttcgattcccagggggaacaacgttggccagtgcgca 22593179  T
Q  234 tgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    ||||||||||||| || |  |||||||||||||||||||| |||||| ||| ||||||||||    
T  22593180 tgcctctacgcatgagccggattagtcgtccacctttggtgggtcgg-aaccggtgcgaaag 22593240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 136 - 297
Target Start/End: Original strand, 38962708 - 38962872
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgag 231  Q
    |||| |||||||| || |||||| ||||||||||||||||||||||| | ||||||||  ||||||||||  |  || ||||||    ||| || ||| |    
T  38962708 ccaagttgtttggactccagtggtaaggagctcatttcaaggacgtatccggggaataccgggttcgattt-tcaggaggaacaacgcttggccagtgcg 38962806  T
Q  232 catgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaagaa 297  Q
    ||||||||||||||| |  |  |||||||||||||||||||| |||| ||||||||||||||||||    
T  38962807 catgcctctacgcatgaaccggattagtcgtccacctttggtgggtcagaaactggtgcgaaagaa 38962872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 159 - 295
Target Start/End: Complemental strand, 34346425 - 34346286
Alignment:
Q  159 caaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgagcatgcctctacgcattagtcaaa 254  Q
    ||||||||||||| ||||||||||||||||||||| |||||| ||||  |  |||||||||    ||| || ||| |||||||||||||||| ||||| |    
T  34346425 caaggagctcattccaaggacgtacctggggaatactgggtttgatta-tcagggggaacaacacttggccagtgtgcatgcctctacgcatgagtcaga 34346327  T
Q  255 ttagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    ||| |||  |||||||||| |||||||||| ||||||||||    
T  34346326 ttaatcgctcacctttggtgggtcggaaaccggtgcgaaag 34346286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 136 - 295
Target Start/End: Original strand, 7747219 - 7747381
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgag 231  Q
    |||| ||| ||||||| |||||||||||||||| || |||||||||| | ||||||||  |||||||||||| | || ||||||    ||| || ||| |    
T  7747219 ccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcc-taggaggaacaacgtttggccagtgtg 7747317  T
Q  232 catgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    ||||||||||||||| || |  ||||||||| ||||||| || |||||||||| ||||||||||    
T  7747318 catgcctctacgcatgagccggattagtcgttcacctttagtgggtcggaaaccggtgcgaaag 7747381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 153 - 295
Target Start/End: Original strand, 41220597 - 41220742
Alignment:
Q  153 cagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgagcatgcctctacgcatta 248  Q
    |||||||||||||||| || |||||||||||| ||||||||  ||||||||||||  || || ||||    ||| || ||| |||||||||||||||| |    
T  41220597 cagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccaggagg-aacaacgcttggccagtgcgcatgcctctacgcatga 41220695  T
Q  249 gtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    | | |||||||||| ||||||| || |||||||||| ||||||||||    
T  41220696 gccgaattagtcgttcacctttagtgggtcggaaaccggtgcgaaag 41220742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 136 - 295
Target Start/End: Original strand, 8410076 - 8410238
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggg--gaaca-ttgaccggtgagc 232  Q
    |||| ||| ||||||| |||||||||||||||| || |||||||||||| || |||||| ||||||||||||  |||||   |||| ||| || ||| ||    
T  8410076 ccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacccggagaatatcgggttcgattcccagggggaacaacacttggccagtgcgc 8410175  T
Q  233 atgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||||||||  || |  |||||||| |||| |||||  |||||||||| ||||||||||    
T  8410176 atgcctctacgcacgagccggattagtcgcccacttttggggggtcggaaaccggtgcgaaag 8410238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 136 - 295
Target Start/End: Complemental strand, 14169770 - 14169608
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgag 231  Q
    |||| ||||||||||| ||||| ||||||| || || ||||||||||   ||||||||| |||||||||| ||  |||||||||    |||||| ||| |    
T  14169770 ccaagttgtttgggctccagtgacaaggagatctttccaaggacgtattcggggaatatcgggttcgatt-ctccgggggaacaacacttgaccagtgcg 14169672  T
Q  232 catgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||| |||||||||| || |  |||||||||| ||| ||||| |||||||||| ||||||||||    
T  14169671 catgtctctacgcatgagccggattagtcgtctaccattggtgggtcggaaaccggtgcgaaag 14169608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 136 - 295
Target Start/End: Complemental strand, 18902691 - 18902529
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgag 231  Q
    |||| ||| ||||||| |||||||||||||||| || |||||||||||  ||||||||  ||||||||||||    ||||||||    |||||| ||| |    
T  18902691 ccaagttgcttgggctccagtggcaaggagctccttccaaggacgtactcggggaataccgggttcgattcc-cacggggaacaacgcttgaccagtgcg 18902593  T
Q  232 catgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    | || |||||||||  || || |||||||| ||||||||||| |||||||||| ||||||||||    
T  18902592 cgtgtctctacgcacgagccagattagtcgcccacctttggtgggtcggaaaccggtgcgaaag 18902529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 25330077 - 25330130
Alignment:
Q  30 tcactcatgaaatattactgcctcaagtagagtaattcttcactaccatgatta 83  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  25330077 tcactcacgaaatattactgtctcaagtagagtaattcttcactaccatgatta 25330130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 136 - 205
Target Start/End: Original strand, 29422160 - 29422229
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgatt 205  Q
    |||| ||||||||||| |||| ||||||||||| ||||||||||||||| |||||||| |||||||||||    
T  29422160 ccaagttgtttgggctccagtagcaaggagctcctttcaaggacgtacccggggaatactgggttcgatt 29422229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 136 - 298
Target Start/End: Original strand, 33005697 - 33005861
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttgggg-ggaaca-ttgaccggtgagca 233  Q
    |||||||| ||||||| ||||||||||||||||||||| |||||||||| | ||||||  ||||||  ||||  ||||   |||| ||| || ||| |||    
T  33005697 ccaaattgcttgggctccagtggcaaggagctcatttctaggacgtacccgtggaataccgggttctgttcccaggggaacaacacttggccagtgcgca 33005796  T
Q  234 tgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaagaaa 298  Q
    ||||||||||||| || || |||| |||  ||||||| || |||||||||| | |||||||||||    
T  33005797 tgcctctacgcatgaggcagattaatcgctcacctttagtgggtcggaaaccgatgcgaaagaaa 33005861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 160 - 295
Target Start/End: Complemental strand, 15234198 - 15234060
Alignment:
Q  160 aaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgagcatgcctctacgcattagtcaaat 255  Q
    ||||||||| || |||||||||||| |||||||| | |||||||||| |  |||||||||    |||||| ||| |||||||||||||||  ||| | ||    
T  15234198 aaggagctccttccaaggacgtacccggggaatactaggttcgattc-tcagggggaacaacacttgaccagtgcgcatgcctctacgcacaagttagat 15234100  T
Q  256 tagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    ||||||| || ||||| |||||||||||| | ||||||||    
T  15234099 tagtcgttcatctttgataggtcggaaaccgatgcgaaag 15234060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 136 - 298
Target Start/End: Complemental strand, 9360909 - 9360744
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgag 231  Q
    |||||||| ||||||| ||| |||||||| |||||| |||||||||||| ||||||||   ||||||||| | | | || ||||    ||| || ||| |    
T  9360909 ccaaattgcttgggcttcaggggcaaggatctcattccaaggacgtacccggggaataccaggttcgattac-tagaggaaacaacgtttggccagtgcg 9360811  T
Q  232 catgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaagaaa 298  Q
    ||||||||||||||  || | ||||||||| |||||||| || || ||||||| |||||||||||||    
T  9360810 catgcctctacgcacgagccgaattagtcgcccacctttagtgggccggaaaccggtgcgaaagaaa 9360744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 136 - 284
Target Start/End: Original strand, 331446 - 331597
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggg--gaaca-ttgaccggtgagc 232  Q
    |||| ||| ||||||| ||||||||| |||||| || |||||||||||| ||||||||  ||||||||||||  |||||   |||| ||| || ||| ||    
T  331446 ccaagttgcttgggctccagtggcaatgagctctttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgc 331545  T
Q  233 atgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaac 284  Q
    |||| ||||||||| || |  |||||||| ||||||||||| ||| ||||||    
T  331546 atgcttctacgcatgagccggattagtcgcccacctttggtgggttggaaac 331597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 231 - 295
Target Start/End: Original strand, 16325638 - 16325702
Alignment:
Q  231 gcatgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||||||||||| || || |||||||||||||| ||||| |||||||||| ||||||||||    
T  16325638 gcatgcctctacgcatgagccagattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 16325702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 136 - 207
Target Start/End: Original strand, 2550813 - 2550884
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 207  Q
    |||| ||| ||||||| |||||||||||||||| || |||||||||| | ||||||||| ||||||||||||    
T  2550813 ccaagttgcttgggctccagtggcaaggagctccttacaaggacgtatccggggaatatcgggttcgattcc 2550884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 136 - 295
Target Start/End: Complemental strand, 41032066 - 41031905
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggg--gaaca-ttgaccggtgagc 232  Q
    |||||||| ||||||| |||||||||||||||| || ||||||||||||  ||||| |  ||||||||||||  |||||   |||| ||| || ||| ||    
T  41032066 ccaaattgcttgggctccagtggcaaggagctccttccaaggacgtacc-agggaacaccgggttcgattcccagggggaacaacacttggccagtgtgc 41031968  T
Q  233 atgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||||||||  || |  |||||||  ||||||||||| ||||||||||  |||||||||    
T  41031967 atgcctctacgcacgagccggattagtcacccacctttggtgggtcggaaaccagtgcgaaag 41031905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 136 - 295
Target Start/End: Complemental strand, 10026777 - 10026615
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgag 231  Q
    |||| ||| ||||||| || ||||||||||||| || |||||||||||  ||  ||||  ||||||||||| |  |||||||||    ||| || ||| |    
T  10026777 ccaagttgcttgggctccaatggcaaggagctccttccaaggacgtactcggaaaataccgggttcgattc-tcagggggaacaacgtttggccagtgcg 10026679  T
Q  232 catgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    ||||||||||||||| || |  |||||||| ||||||||||| ||||||||||| ||| |||||    
T  10026678 catgcctctacgcatgagccggattagtcgaccacctttggtgggtcggaaactagtgtgaaag 10026615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 136 - 295
Target Start/End: Original strand, 11069823 - 11069985
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgag 231  Q
    |||| |||||| |||| || |||| ||||||||||| |||||||||||| ||||||||   |||||||||||   |||||||||    ||| || ||| |    
T  11069823 ccaagttgttttggctccaatggctaggagctcattccaaggacgtacccggggaataccaggttcgattcc-gagggggaacaacgtttggccagtgcg 11069921  T
Q  232 catgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    ||| ||||||||||  ||   ||||||||||||||| ||||| |||||||||| | ||||||||    
T  11069922 catacctctacgcacgagctgaattagtcgtccaccgttggtgggtcggaaaccgatgcgaaag 11069985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 145 - 295
Target Start/End: Original strand, 35946693 - 35946845
Alignment:
Q  145 ttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgagcatgcctct 240  Q
    ||||||| | |||| ||||||||||||  ||||||||| | ||||||||  | ||||||||||| ||||  ||||    ||| ||  || ||||||||||    
T  35946693 ttgggcttccgtggtaaggagctcattctaaggacgtatccggggaataccgagttcgattcctagggg--aacaacgcttggccattgtgcatgcctct 35946790  T
Q  241 acgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||  || |  |||||||||||||| ||||| |||||||||||||||||||||    
T  35946791 acgcacgagccggattagtcgtccaccattggtgggtcggaaactggtgcgaaag 35946845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 141 - 298
Target Start/End: Complemental strand, 6358307 - 6358147
Alignment:
Q  141 ttgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttgggggga--aca-ttgaccggtgagcatgcc 237  Q
    ||||||||||| |||||||||| ||||||||  ||||||||| | ||||||||   | ||||||| |  ||||| |  ||| ||| || ||| |||||||    
T  6358307 ttgtttgggctccagtggcaagaagctcattcaaaggacgtatccggggaataccagattcgatttccagggggaacaacacttggccagtgcgcatgcc 6358208  T
Q  238 tctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaagaaa 298  Q
    ||||||||| || |  |||||||||||||| ||||| ||||| |||| |||| ||||||||    
T  6358207 tctacgcatgagccggattagtcgtccaccattggtgggtcgaaaaccggtgtgaaagaaa 6358147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 136 - 205
Target Start/End: Complemental strand, 19976968 - 19976899
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgatt 205  Q
    |||||||||||||||| |||||||||| ||||| || |||||||||| | ||||||||  ||||||||||    
T  19976968 ccaaattgtttgggctccagtggcaagtagctctttccaaggacgtatccggggaataccgggttcgatt 19976899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 136 - 205
Target Start/End: Original strand, 34356151 - 34356220
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgatt 205  Q
    |||| ||||||||||| |||||||||||||||  || |||||||||| ||||||||||  ||||||||||    
T  34356151 ccaagttgtttgggctccagtggcaaggagctatttccaaggacgtatctggggaataccgggttcgatt 34356220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 138 - 207
Target Start/End: Complemental strand, 39807044 - 39806975
Alignment:
Q  138 aaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 207  Q
    |||||||||||||| ||||||||||  |||| || |||||||||||| ||||||||  ||||||||||||    
T  39807044 aaattgtttgggctccagtggcaagatgctccttacaaggacgtacccggggaataccgggttcgattcc 39806975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 231 - 295
Target Start/End: Original strand, 12864267 - 12864331
Alignment:
Q  231 gcatgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||||| ||||| || || |||||||||||||| ||||| |||||||||| ||||||||||    
T  12864267 gcatgcctctgcgcatgagccagattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 12864331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 231 - 295
Target Start/End: Complemental strand, 13104888 - 13104824
Alignment:
Q  231 gcatgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||||||||||| ||  |||||||||||| ||||||| ||||||| ||||||||| |||||    
T  13104888 gcatgcctctacgcatgagctaaattagtcgtctacctttgataggtcgaaaactggtgtgaaag 13104824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 295
Target Start/End: Original strand, 29421321 - 29421389
Alignment:
Q  227 gtgagcatgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||||||||||||||| |||| || |||||||| || |||||||| ||||||||  |||||||||    
T  29421321 gtgagcatgcctctacgcatgagtcgaagtagtcgtctacatttggtagatcggaaaccagtgcgaaag 29421389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 136 - 295
Target Start/End: Complemental strand, 3644048 - 3643886
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgag 231  Q
    |||| ||| ||||||| |||||| |||||||||||| |||||||||| | ||||||||  ||||| |||| | |  | ||||||    ||| || ||| |    
T  3644048 ccaagttgcttgggctccagtggaaaggagctcattccaaggacgtatccggggaataccgggtttgatttc-tacgaggaacaacgcttggccagtgcg 3643950  T
Q  232 catgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    ||||||||||||||| ||    |||||||||||||||||||| || ||||||| | ||||||||    
T  3643949 catgcctctacgcatgagctggattagtcgtccacctttggtgggccggaaaccgttgcgaaag 3643886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 141 - 207
Target Start/End: Original strand, 21286394 - 21286460
Alignment:
Q  141 ttgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 207  Q
    ||||||| ||| |||||||||||||||| || |||||||||| | ||||||||  ||||||||||||    
T  21286394 ttgtttgagctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcc 21286460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 206
Target Start/End: Original strand, 25549681 - 25549743
Alignment:
Q  144 tttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattc 206  Q
    |||||||| |||||||||||||||| || |||| |||||  ||||||||| ||||||||||||    
T  25549681 tttgggctccagtggcaaggagctccttccaagtacgtatttggggaatactgggttcgattc 25549743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 145 - 205
Target Start/End: Original strand, 7787010 - 7787070
Alignment:
Q  145 ttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgatt 205  Q
    ||||||| |||||||||||| ||| |||| |||||||||| ||||||||  ||||||||||    
T  7787010 ttgggctccagtggcaaggaactcctttctaggacgtacccggggaataccgggttcgatt 7787070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 231 - 295
Target Start/End: Complemental strand, 20116675 - 20116611
Alignment:
Q  231 gcatgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||||||||||| || |  ||||| |||||||||||| | |||||||||| ||||||||||    
T  20116675 gcatgcctctacgcatgagccggattagccgtccacctttgatgggtcggaaaccggtgcgaaag 20116611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 136 - 184
Target Start/End: Complemental strand, 21180475 - 21180427
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacc 184  Q
    |||| ||||||||||| |||||||||||||||| || ||||||||||||    
T  21180475 ccaagttgtttgggctccagtggcaaggagctccttccaaggacgtacc 21180427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 136 - 289
Target Start/End: Complemental strand, 39201669 - 39201513
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgag 231  Q
    |||| ||| |||||||  ||||||||||||||| || |||||||||||  | ||||||  |  |||||||| |  |||||||||    ||| || ||| |    
T  39201669 ccaagttgattgggctatagtggcaaggagctccttccaaggacgtactcgaggaataccgaattcgattc-tcagggggaacaatgtttggccagtgtg 39201571  T
Q  232 catgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtg 289  Q
    ||||||||||||||| || |  ||||||||| |||||||||| |||||||||| ||||    
T  39201570 catgcctctacgcatgagccggattagtcgttcacctttggtgggtcggaaaccggtg 39201513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 2528502 - 2528455
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtac 183  Q
    |||||||||||||||| ||||||||| |||||| || |||||||||||    
T  2528502 ccaaattgtttgggctccagtggcaatgagctccttccaaggacgtac 2528455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 231 - 294
Target Start/End: Original strand, 2784975 - 2785038
Alignment:
Q  231 gcatgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaa 294  Q
    |||||||||||||||| ||||| |||||||||||| | ||| |  ||||||||| |||||||||    
T  2784975 gcatgcctctacgcatgagtcagattagtcgtccatcattgatgagtcggaaaccggtgcgaaa 2785038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 231 - 294
Target Start/End: Complemental strand, 10046540 - 10046477
Alignment:
Q  231 gcatgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaa 294  Q
    |||||||||||||||| || |  |||||||| ||||||||||| ||||||||||| ||| ||||    
T  10046540 gcatgcctctacgcatgagccggattagtcgaccacctttggtgggtcggaaactagtgtgaaa 10046477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 207
Target Start/End: Complemental strand, 23500842 - 23500772
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 207  Q
    |||| ||||||||||| | |||||||||||||| || ||| |||||| | ||||||||| ||||||||||||    
T  23500842 ccaagttgtttgggctccggtggcaaggagctccttccaaagacgtatc-ggggaatatcgggttcgattcc 23500772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 344
Target Start/End: Original strand, 25330190 - 25330221
Alignment:
Q  313 aatggccacgtcatggaaatttgctttaaaac 344  Q
    ||||||||||||||||||||||||||||||||    
T  25330190 aatggccacgtcatggaaatttgctttaaaac 25330221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 240 - 295
Target Start/End: Original strand, 44023347 - 44023402
Alignment:
Q  240 tacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    ||||||| |||| ||||||||||||| ||||||| ||| |||||| ||||||||||    
T  44023347 tacgcatgagtcgaattagtcgtccatctttggtgggttggaaaccggtgcgaaag 44023402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 136 - 294
Target Start/End: Complemental strand, 20612697 - 20612534
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgag 231  Q
    |||| ||| ||||||| |||||||||||||||| || |||||  |||   ||||||||  |||||||||||   || |||||||    ||| || ||| |    
T  20612697 ccaagttgcttgggctccagtggcaaggagctccttccaaggttgtattcggggaataccgggttcgattctcaggagggaacaacacttggccagtgcg 20612598  T
Q  232 catgcctctacgcattagtcaa-attagtcgtccacctttggtaggtcggaaactggtgcgaaa 294  Q
    |||||||||| |||| || |   |||||||||||||| ||||| |||||||||| |||||||||    
T  20612597 catgcctctatgcatgagccgggattagtcgtccaccattggtgggtcggaaaccggtgcgaaa 20612534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 233 - 295
Target Start/End: Complemental strand, 34738394 - 34738332
Alignment:
Q  233 atgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||||||||  ||||  ||||||||||||||  ||||||||||||||| ||||| ||||    
T  34738394 atgcctctacgcacgagtcggattagtcgtccaccaatggtaggtcggaaaccggtgcaaaag 34738332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 193
Target Start/End: Complemental strand, 2149356 - 2149299
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaata 193  Q
    |||| ||||||||||| |||||||||||| ||  ||||||||| ||| ||||||||||    
T  2149356 ccaagttgtttgggctccagtggcaaggaacttctttcaaggatgtatctggggaata 2149299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 193
Target Start/End: Complemental strand, 14853528 - 14853471
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaata 193  Q
    |||| ||||||||||| |||||||||||| ||| ||||||||| ||| | ||||||||    
T  14853528 ccaagttgtttgggctccagtggcaaggaactcctttcaaggatgtatccggggaata 14853471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 295
Target Start/End: Complemental strand, 44548764 - 44548723
Alignment:
Q  254 attagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||||||||||||| | | |||||||||||||||||||    
T  44548764 attagtcgtccacctttgatggatcggaaactggtgcgaaag 44548723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 231 - 295
Target Start/End: Original strand, 10106631 - 10106695
Alignment:
Q  231 gcatgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||| |||| |||| ||||  |||||||||||||||||  ||||||| || ||||||||||||    
T  10106631 gcatgcttctatgcataagtcggattagtcgtccacctttaataggtcgaaagctggtgcgaaag 10106695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 3e-27; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 136 - 295
Target Start/End: Original strand, 54261171 - 54261333
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgag 231  Q
    |||| ||||||||||| |||||||||||||||| || |||||||||||||||||||||  |||||||||||| | || ||||||    ||| || ||| |    
T  54261171 ccaagttgtttgggctccagtggcaaggagctccttccaaggacgtacctggggaataccgggttcgattcc-taggaggaacaacgcttggccagtgcg 54261269  T
Q  232 catgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    ||||||||||||||| || |  ||||||||| ||||||| || |||||||||| ||||||||||    
T  54261270 catgcctctacgcatgagccggattagtcgttcacctttagtgggtcggaaaccggtgcgaaag 54261333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 136 - 295
Target Start/End: Original strand, 48341965 - 48342127
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgag 231  Q
    |||| ||||||||||| |||||||||||||||| || |||||||||||||||||||||  |||||| ||||| | |||||||||    ||| |  ||| |    
T  48341965 ccaagttgtttgggctccagtggcaaggagctccttccaaggacgtacctggggaataccgggttctattcc-tagggggaacaacgcttggctagtgcg 48342063  T
Q  232 catgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    ||||||||||||||| |  || |||||||||||| ||||||| | |||||||| ||||||||||    
T  48342064 catgcctctacgcatgaaccagattagtcgtccatctttggtggatcggaaacaggtgcgaaag 48342127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 141 - 295
Target Start/End: Complemental strand, 3136850 - 3136694
Alignment:
Q  141 ttgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgagcatgc 236  Q
    ||||||||||| | |||||||| ||||| ||||||||||||||| ||||||||  || |||||||  ||  ||||||||    |||  | ||| ||||||    
T  3136850 ttgtttgggctcccgtggcaagaagctcctttcaaggacgtacccggggaataccggattcgatt--ttcaggggaacaacacttgggcagtgcgcatgc 3136753  T
Q  237 ctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||||| ||||  |||||||||||||||||||| |||||||||| ||||||||||    
T  3136752 ctctacgcatgagtcggattagtcgtccacctttggttggtcggaaaccggtgcgaaag 3136694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 145 - 295
Target Start/End: Complemental strand, 30767400 - 30767247
Alignment:
Q  145 ttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggg--gaaca-ttgaccggtgagcatgcctcta 241  Q
    ||||||| ||||||||||||| || || |||||| ||||||||||||||| |||||||||| |  |||||   |||| ||| || ||| |||||||||||    
T  30767400 ttgggctccagtggcaaggagttccttccaaggatgtacctggggaatatcgggttcgatttccagggggaacaacacttggccagtgtgcatgcctcta 30767301  T
Q  242 cgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    ||||  || |  |||||||| ||||||||||| ||||||||||| |||||||||    
T  30767300 cgcacgagccggattagtcgcccacctttggtgggtcggaaactagtgcgaaag 30767247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 136 - 298
Target Start/End: Original strand, 35315901 - 35316066
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggg--gaaca-ttgaccggtgagc 232  Q
    |||| ||||||||||| ||||||||| |||||| || |||||||||||| || |||||| ||||||||||||  |||||   |||| ||| || ||| ||    
T  35315901 ccaagttgtttgggctccagtggcaaagagctccttccaaggacgtacccggagaatatcgggttcgattcccagggggaacaacacttggccagtgcgc 35316000  T
Q  233 atgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaagaaa 298  Q
    |||||||||||||| ||    |||||||| |||| |||||| |||||||||| | |||||||||||    
T  35316001 atgcctctacgcatgagctggattagtcgcccacttttggtgggtcggaaaccgatgcgaaagaaa 35316066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 136 - 206
Target Start/End: Complemental strand, 46530032 - 46529962
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattc 206  Q
    |||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||||  |||||||||||    
T  46530032 ccaagttgtttgggctccagtggcaaggagctcctttcaaggacgtacctggggaataccgggttcgattc 46529962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 136 - 295
Target Start/End: Original strand, 29127864 - 29128026
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggg--gaaca-ttgaccggtgagc 232  Q
    |||| ||||||||||| ||||||||||||| || || |||||||||| ||||||||||| |||||||||| |  ||| |   |||| |||  | ||| ||    
T  29127864 ccaagttgtttgggctccagtggcaaggagatccttccaaggacgtatctggggaatatcgggttcgatttccagggagaacaacacttggtcagtgcgc 29127963  T
Q  233 atgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||||||||| || |  |||||||| ||||||||||| |||||||||| | ||||||||    
T  29127964 atgcctctacgcatgagccggattagtcgcccacctttggtgggtcggaaaccgatgcgaaag 29128026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 136 - 295
Target Start/End: Complemental strand, 47749266 - 47749105
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgag 231  Q
    |||||||||||||||| |||||| || |||||  || |||||||||| |  |||||||  ||||||||||||| ||||  ||||    ||| || ||| |    
T  47749266 ccaaattgtttgggctccagtggtaatgagcttcttccaaggacgtatccagggaataccgggttcgattcctagggg--aacaactcttggccagtgcg 47749169  T
Q  232 catgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    ||||||||||||||  || | ||||||||| |||||||||||||||||||||| | ||||||||    
T  47749168 catgcctctacgcacgagccgaattagtcgcccacctttggtaggtcggaaaccgatgcgaaag 47749105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 136 - 295
Target Start/End: Original strand, 47471777 - 47471938
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgag 231  Q
    |||| ||| |||||||  |||||||| |||||| || ||||||||||||| |||||||  ||||||||||||  ||||  ||||    ||| |  ||| |    
T  47471777 ccaagttgcttgggctctagtggcaaagagctccttccaaggacgtacctagggaataccgggttcgattcccagggg--aacaatgcttggctagtgcg 47471874  T
Q  232 catgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    ||||| ||||||||| || | ||||||||||||||||||||| |||||||||| | ||||||||    
T  47471875 catgcttctacgcatgagccgaattagtcgtccacctttggtgggtcggaaaccgatgcgaaag 47471938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 137 - 207
Target Start/End: Original strand, 10043096 - 10043166
Alignment:
Q  137 caaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 207  Q
    ||||||||||||||| || |||||| |||||| ||||||||||||| | ||||||||| ||||||||||||    
T  10043096 caaattgtttgggctccactggcaatgagctcctttcaaggacgtatccggggaatatcgggttcgattcc 10043166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 136 - 295
Target Start/End: Original strand, 15320131 - 15320293
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaac----attgaccggtgag 231  Q
    |||| |||||||| || |||||||||||||||| || |||||||||||| ||||||||  |||||||||| |   || |||||    |||| || ||| |    
T  15320131 ccaagttgtttggactccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgatttc-gaggaggaacaatgattggccagtgtg 15320229  T
Q  232 catgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    ||||||||||||||  || |  |||||||| ||||||||||| |||| ||||| ||||||||||    
T  15320230 catgcctctacgcacgagccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaag 15320293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 136 - 295
Target Start/End: Original strand, 30045766 - 30045928
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgag 231  Q
    |||| ||| |||||||  |||||||| |||||| ||| ||| |||||| |||||||||  ||||||||||||| ||||| ||||    ||| || ||| |    
T  30045766 ccaagttgcttgggctcaagtggcaatgagctccttttaagaacgtacatggggaataccgggttcgattcctaggggg-aacaacgcttggccagtgcg 30045864  T
Q  232 catgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||| |||||||||  ||||  |||||||||||||||||| | ||||| ||||| |||||||||    
T  30045865 catgtctctacgcacgagtctgattagtcgtccacctttgatgggtcgtaaactagtgcgaaag 30045928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 136 - 295
Target Start/End: Original strand, 49543464 - 49543626
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgag 231  Q
    |||| |||||||||||  ||||||||||||||| || |||||||||| |  |||||||| |||||||||| ||   ||||||||    |||  | ||| |    
T  49543464 ccaatttgtttgggctttagtggcaaggagctccttccaaggacgtatcccgggaatatcgggttcgatt-ctcatggggaacaacgtttggtcagtgtg 49543562  T
Q  232 catgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    ||||||||||||||  || | ||||||||| |||||||| || |||||||||||||| ||||||    
T  49543563 catgcctctacgcacgagccgaattagtcgcccacctttagtgggtcggaaactggtacgaaag 49543626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 153 - 295
Target Start/End: Complemental strand, 28572356 - 28572211
Alignment:
Q  153 cagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgagcatgcctctacgcatta 248  Q
    |||||||||||||||| ||||||| ||| ||| |||||||| |||||||||||||   |||| ||||    ||| || ||  |||||||||||||||  |    
T  28572356 cagtggcaaggagctcctttcaagaacgcacccggggaatactgggttcgattcc-caggggaaacaacgcttggccagtatgcatgcctctacgcacga 28572258  T
Q  249 gtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    | |  |||||||| ||||||||||| |||||||||| ||||||||||    
T  28572257 gccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaag 28572211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 136 - 274
Target Start/End: Complemental strand, 32873710 - 32873570
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgag 231  Q
    |||| ||||||||||| ||||||||||||||||||| ||||||||||||  |||||||   ||||||||||| | ||| |||||    |||||| |||      
T  32873710 ccaagttgtttgggctccagtggcaaggagctcattccaaggacgtacc-cgggaataccaggttcgattcc-tagggagaacaacgcttgaccagtgca 32873613  T
Q  232 catgcctctacgcattagtcaaattagtcgtccacctttggta 274  Q
    |||||||||||| || || || |||||||| ||||||||||||    
T  32873612 catgcctctacgtatgagccagattagtcgcccacctttggta 32873570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 136 - 291
Target Start/End: Original strand, 10040502 - 10040659
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgag 231  Q
    |||| ||| ||||||| |||||||||||||||| ||  ||||||||||| ||||||||| |||||||||||  |  ||||||||    ||| || ||| |    
T  10040502 ccaagttgcttgggctccagtggcaaggagctccttctaaggacgtacccggggaatatcgggttcgattc--tcaggggaacaacgcttggccagtgcg 10040599  T
Q  232 catgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcg 291  Q
    ||||||||||||||  || |  | | |||||||||||||||| ||| |||||| ||||||    
T  10040600 catgcctctacgcacgagccggaatggtcgtccacctttggtgggttggaaaccggtgcg 10040659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 136 - 295
Target Start/End: Original strand, 25294905 - 25295067
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttgggg--ggaaca-ttgaccggtgagc 232  Q
    |||| ||| ||||||| |||||||||||||||| || |||||||||| | ||||||||  ||||| |||||  |||||    |||| ||| || ||| ||    
T  25294905 ccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggtttgattctctggggaaacaacacttggccagtgcgc 25295004  T
Q  233 atgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    ||||||||| |||| || |  |||||||||||||| ||||| ||| |||||| ||||||||||    
T  25295005 atgcctctatgcatgagccggattagtcgtccaccattggtgggttggaaaccggtgcgaaag 25295067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 136 - 295
Target Start/End: Original strand, 29135858 - 29136020
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggg--gaaca-ttgaccggtgagc 232  Q
    |||||||| ||||||| |||||||||||||||  || |||||||||| | ||||||||  || |||||||||  |||||   |||| ||| || ||| ||    
T  29135858 ccaaattgcttgggctccagtggcaaggagcttcttccaaggacgtatccggggaataccggattcgattcccagggggaacaacacttggccagtgcgc 29135957  T
Q  233 atgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||||||||| || |  ||||||| |||||| ||||| ||| |||||| ||| ||||||    
T  29135958 atgcctctacgcatgagccggattagtcttccaccattggtgggttggaaaccggtacgaaag 29136020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 136 - 271
Target Start/End: Complemental strand, 35923785 - 35923647
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgag 231  Q
    |||| |||||||||||  |||||||| ||||||||| ||||||||||||||| |||||   ||||||||| | | |||||||||    ||| || ||| |    
T  35923785 ccaagttgtttgggctctagtggcaatgagctcattccaaggacgtacctggagaataccaggttcgatt-catagggggaacaacgtttggccagtgcg 35923687  T
Q  232 catgcctctacgcattagtcaaattagtcgtccacctttg 271  Q
    |||||||||| |||  |||| ||||||||||||| |||||    
T  35923686 catgcctctaagcacgagtcgaattagtcgtccatctttg 35923647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 142 - 207
Target Start/End: Complemental strand, 7613082 - 7613017
Alignment:
Q  142 tgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 207  Q
    ||||||| || |||||||||||||||| || ||||||||||| |||||||||  ||||||||||||    
T  7613082 tgtttggacttcagtggcaaggagctccttccaaggacgtacttggggaataccgggttcgattcc 7613017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 141 - 295
Target Start/End: Original strand, 31072828 - 31072985
Alignment:
Q  141 ttgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgagcatgc 236  Q
    ||||||||||| || ||||||||||||| ||||||||||||||| || |||||   ||||||||| |   |||||||||    |||  | |||  |||||    
T  31072828 ttgtttgggctccaatggcaaggagctcctttcaaggacgtacccggagaataccaggttcgatttc-cagggggaacaacgcttggtcagtgcacatgc 31072926  T
Q  237 ctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||||  |  || |||| ||||||||||||||||||| |||||| ||||||||||    
T  31072927 ctctacgcacgacccagattaatcgtccacctttggtaggttggaaaccggtgcgaaag 31072985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 254 - 298
Target Start/End: Original strand, 19147027 - 19147071
Alignment:
Q  254 attagtcgtccacctttggtaggtcggaaactggtgcgaaagaaa 298  Q
    |||||||||||||||||||| |||||||||| |||||||||||||    
T  19147027 attagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaa 19147071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 136 - 297
Target Start/End: Complemental strand, 29762317 - 29762153
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgag 231  Q
    |||| ||| ||||||| |||||||||||||||| || |||||| |||   ||||||||| |||| |||||| |  |||| ||||    ||| || ||| |    
T  29762317 ccaagttgcttgggctccagtggcaaggagctccttccaaggatgtattcggggaatatcgggtccgattc-tcaggggcaacaacacttggccagtgcg 29762219  T
Q  232 catgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaagaa 297  Q
    |||||||||| |||| ||    |||||||||||||| ||||| |||||||||| ||||||||||||    
T  29762218 catgcctctatgcatgagctggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagaa 29762153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 141 - 193
Target Start/End: Original strand, 33560810 - 33560862
Alignment:
Q  141 ttgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaata 193  Q
    ||||||||||| |||||||||||||||| || |||||| ||||||||||||||    
T  33560810 ttgtttgggcttcagtggcaaggagctccttccaaggatgtacctggggaata 33560862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 231 - 295
Target Start/End: Original strand, 47219187 - 47219251
Alignment:
Q  231 gcatgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||||||||||| || |  |||||||||||||||||| | |||||||||| ||||||||||    
T  47219187 gcatgcctctacgcatgagccggattagtcgtccacctttgatgggtcggaaaccggtgcgaaag 47219251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 231 - 295
Target Start/End: Complemental strand, 49021267 - 49021203
Alignment:
Q  231 gcatgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||||||||||| || |  |||||||||||||| ||||| |||||||||| ||||||||||    
T  49021267 gcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 49021203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 136 - 260
Target Start/End: Complemental strand, 11687271 - 11687144
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgag 231  Q
    |||| ||||||||||| |||||||||| ||||| || ||||||||||||||| |||||  ||||| |||| ||  |||||||||    ||| || ||| |    
T  11687271 ccaagttgtttgggctccagtggcaagaagctccttccaaggacgtacctggagaataccgggtttgatt-ctcagggggaacaatgcttggccagtgcg 11687173  T
Q  232 catgcctctacgcattagtcaaattagtc 260  Q
    |||||||||||| || ||||| |||||||    
T  11687172 catgcctctacgtatgagtcagattagtc 11687144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 220 - 295
Target Start/End: Original strand, 23511599 - 23511674
Alignment:
Q  220 ttgaccggtgagcatgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||| ||| |||||||||||||||| ||||  |||| ||||||||||||| | ||||| |||| ||||||||||    
T  23511599 ttgaccagtgcgcatgcctctacgcatgagtcggattaatcgtccacctttgatgggtcgaaaaccggtgcgaaag 23511674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 136 - 207
Target Start/End: Complemental strand, 26207963 - 26207892
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 207  Q
    |||| ||| ||||||| |||||||||||||||| || |||||| ||||| ||||||||  ||||||||||||    
T  26207963 ccaagttgcttgggctccagtggcaaggagctccttccaaggatgtacccggggaataccgggttcgattcc 26207892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 136 - 295
Target Start/End: Original strand, 45877399 - 45877561
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttgggg--ggaaca-ttgaccggtgagc 232  Q
    |||| ||||||||||| |||||||||||||| | || |||||||||| | ||||||||  |||||||||| |  ||||    |||| ||| || |||  |    
T  45877399 ccaagttgtttgggctccagtggcaaggagccccttccaaggacgtatccggggaataccgggttcgatttccaggggaaacaacacttggccagtgcac 45877498  T
Q  233 atgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||||||||| || |  ||||||||| |||| ||| | |||||||||| ||||||||||    
T  45877499 atgcctctacgcatgagccggattagtcgttcaccattgatgggtcggaaaccggtgcgaaag 45877561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 293
Target Start/End: Original strand, 8362620 - 8362682
Alignment:
Q  231 gcatgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaa 293  Q
    |||||||||||||||| || |||||||||||||||||||| || | || ||||| ||||||||    
T  8362620 gcatgcctctacgcatgagccaaattagtcgtccacctttagtggatccgaaaccggtgcgaa 8362682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 298
Target Start/End: Complemental strand, 45450522 - 45450444
Alignment:
Q  220 ttgaccggtgagcatgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaagaaa 298  Q
    |||||| ||| |||||||||||||||| ||  | |||||||||||||||||| |  || |||||| |||||||||||||    
T  45450522 ttgaccagtgcgcatgcctctacgcataagctagattagtcgtccacctttgatgagttggaaaccggtgcgaaagaaa 45450444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 6462366 - 6462427
Alignment:
Q  145 ttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattc 206  Q
    |||||||  ||||||||||||||| || |||||||||| ||||||||||  |||||||||||    
T  6462366 ttgggctctagtggcaaggagctccttccaaggacgtatctggggaataccgggttcgattc 6462427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 136 - 273
Target Start/End: Original strand, 49198296 - 49198436
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttgggggga--aca-ttgaccggtgagc 232  Q
    |||| ||||||||||| ||||| ||||||| |  || ||||||| || | ||||||||  ||||||||||||| ||||| |  ||| ||| || ||| ||    
T  49198296 ccaagttgtttgggctccagtgacaaggagtttcttccaaggacatatccggggaataccgggttcgattcctagggggaacaacacttggccagtgcgc 49198395  T
Q  233 atgcctctacgcattagtcaaattagtcgtccacctttggt 273  Q
    |||||||||||||| || |  |||||||||||||| |||||    
T  49198396 atgcctctacgcatgagccggattagtcgtccaccattggt 49198436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 220 - 284
Target Start/End: Original strand, 32522011 - 32522075
Alignment:
Q  220 ttgaccggtgagcatgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaac 284  Q
    |||||||||| |||||  | ||||||| ||||| |||||||||||||||||| | ||||||||||    
T  32522011 ttgaccggtgcgcatgtatttacgcatgagtcagattagtcgtccacctttgatgggtcggaaac 32522075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 231 - 295
Target Start/End: Complemental strand, 41630576 - 41630512
Alignment:
Q  231 gcatgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||||||| ||| || |  |||||||| ||||||||||| ||||||||||||||| |||||    
T  41630576 gcatgcctctacacatgagccggattagtcgcccacctttggttggtcggaaactggtgtgaaag 41630512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 145 - 291
Target Start/End: Complemental strand, 45402501 - 45402355
Alignment:
Q  145 ttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttgggggga--acatt-gaccggtgagcatgcctcta 241  Q
    ||||||| |||||||||| ||||||||    ||| ||||| ||||||||| ||||||||||||| | ||| |  ||| | | || ||| |||||||||||    
T  45402501 ttgggctccagtggcaagaagctcattc---ggatgtacccggggaatatcgggttcgattcctagagggaacaacactcggcctgtgcgcatgcctcta 45402405  T
Q  242 cgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcg 291  Q
    ||||| || |  ||||||||| ||||||| || |||||||||||| ||||    
T  45402404 cgcatgagccggattagtcgttcacctttagtgggtcggaaactgatgcg 45402355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 24506711 - 24506648
Alignment:
Q  232 catgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    ||||||||||||||| ||||| ||||||||  |||| ||||| |||||||||| ||||| ||||    
T  24506711 catgcctctacgcatgagtcagattagtcgctcaccattggtgggtcggaaaccggtgcaaaag 24506648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 207
Target Start/End: Complemental strand, 42412936 - 42412865
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 207  Q
    |||| ||| ||||||| || ||||||||||||| || |||||||||| | ||||||||  ||||||||||||    
T  42412936 ccaagttgcttgggctccaatggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcc 42412865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 156 - 295
Target Start/End: Original strand, 928565 - 928707
Alignment:
Q  156 tggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgagcatgcctctacgcattagtc 251  Q
    |||||||||||||||| ||||||||||||| |||||||   | ||||||| ||  |||||||||    |||||| ||| ||||||| |||||||  || |    
T  928565 tggcaaggagctcattccaaggacgtacctagggaataccagattcgatt-ctcagggggaacaacacttgaccagtgcgcatgccgctacgcacgagcc 928663  T
Q  252 aaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
      ||||||| ||||||||||||  |||| |||  ||||||||||    
T  928664 ggattagtcatccacctttggtgagtcgaaaatcggtgcgaaag 928707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 145 - 207
Target Start/End: Original strand, 39849026 - 39849088
Alignment:
Q  145 ttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 207  Q
    ||||||| |||||||||||||||| || |||||||||||   |||||| | ||||||||||||    
T  39849026 ttgggctccagtggcaaggagctccttccaaggacgtactcagggaatttcgggttcgattcc 39849088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 290
Target Start/End: Complemental strand, 50405678 - 50405608
Alignment:
Q  220 ttgaccggtgagcatgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgc 290  Q
    |||||| ||| |||||||||||||||  ||||  |||||||| ||||| ||||| |||||||||| |||||    
T  50405678 ttgaccagtgcgcatgcctctacgcacgagtcggattagtcgcccaccattggtgggtcggaaaccggtgc 50405608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 136 - 295
Target Start/End: Complemental strand, 51060443 - 51060281
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgag 231  Q
    |||| |||||||| || |||||||||  ||||| || ||||||  || | ||||||||| ||||||||||| |  |||||||||    |||  | ||| |    
T  51060443 ccaagttgtttggactccagtggcaaatagctccttccaaggatctatccggggaatatcgggttcgattc-tcagggggaacaacacttggtcagtgcg 51060345  T
Q  232 catgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    ||||||||||||||| |     |||||||||||||| ||||| |||||||||| ||||||||||    
T  51060344 catgcctctacgcatgaactggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 51060281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 205
Target Start/End: Original strand, 7650172 - 7650241
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgatt 205  Q
    |||| ||||||||| | ||||||||||||| || ||||||||| |||| | |||||||  ||||||||||    
T  7650172 ccaagttgtttgggttccagtggcaaggagttcctttcaaggatgtacttagggaataccgggttcgatt 7650241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 193
Target Start/End: Original strand, 10855329 - 10855386
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaata 193  Q
    |||| ||||||||||| |||||||||||||||| || |||||| |||| |||| ||||    
T  10855329 ccaagttgtttgggctccagtggcaaggagctccttccaaggatgtacttgggaaata 10855386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 181
Target Start/End: Original strand, 13893871 - 13893916
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgt 181  Q
    |||| ||||||||||| |||||||||||||||| || |||||||||    
T  13893871 ccaagttgtttgggctccagtggcaaggagctccttccaaggacgt 13893916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 206
Target Start/End: Complemental strand, 30735102 - 30735037
Alignment:
Q  141 ttgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattc 206  Q
    |||||||||||  |||||||||||||||||| |||||||| ||  ||||||||  | |||||||||    
T  30735102 ttgtttgggctctagtggcaaggagctcattccaaggacgcactcggggaataccgagttcgattc 30735037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 295
Target Start/End: Complemental strand, 36043715 - 36043674
Alignment:
Q  254 attagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||| ||||||||||| |||||||||| ||||||||||    
T  36043715 attagtcgcccacctttggtgggtcggaaaccggtgcgaaag 36043674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 207
Target Start/End: Complemental strand, 13167591 - 13167534
Alignment:
Q  154 agtggcaaggagctcatttcaaggacgtac----ctggggaatattgggttcgattcc 207  Q
    ||||||||||||||| || |||||||||||    ||||||||||| ||||||||||||    
T  13167591 agtggcaaggagctccttccaaggacgtacgtatctggggaatatcgggttcgattcc 13167534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 136 - 208
Target Start/End: Complemental strand, 55069841 - 55069769
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcct 208  Q
    |||| ||||||||||| ||||| ||| |||||| |||||||||||||    ||||||| |||||| |||||||    
T  55069841 ccaagttgtttgggctccagtgacaatgagctcttttcaaggacgtattcagggaatactgggtttgattcct 55069769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 2e-25; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 156 - 295
Target Start/End: Original strand, 34719742 - 34719884
Alignment:
Q  156 tggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcct--tggggggaaca-ttgaccggtgagcatgcctctacgcattagtca 252  Q
    ||||||||||||| || ||||||||||||||||||||| |||||||||||||   ||||   |||  |||||| ||| |||||||||||||||  |||||    
T  34719742 tggcaaggagctccttccaaggacgtacctggggaatactgggttcgattcccactgggaataacgcttgaccagtgcgcatgcctctacgcacgagtca 34719841  T
Q  253 aattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
     ||||||||  |||||||||| |||||||||||||||||||||    
T  34719842 gattagtcgctcacctttggtgggtcggaaactggtgcgaaag 34719884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 136 - 295
Target Start/End: Complemental strand, 17642166 - 17642004
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttgggggga--aca-ttgaccggtgagc 232  Q
    |||| ||||||||||| ||||| |||||||||| || || |||||||||  || |||| |||||||||||||  ||||| |  ||| ||| || ||| ||    
T  17642166 ccaagttgtttgggctccagtgacaaggagctccttccacggacgtacccaggaaatactgggttcgattcccagggggaacaacacttggccagtgcgc 17642067  T
Q  233 atgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||||||||  || |  |||||||||||||||||||| |||||||||||||||||||||    
T  17642066 atgcctctacgcacgagccggattagtcgtccacctttggtgggtcggaaactggtgcgaaag 17642004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 136 - 295
Target Start/End: Original strand, 8763937 - 8764099
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggg--gaaca-ttgaccggtgagc 232  Q
    |||| ||| ||||||| | |||||||||||||| || |||||||||||| ||||||||| ||||||| ||||  |||||   |||| ||| || ||| ||    
T  8763937 ccaagttgcttgggctcccgtggcaaggagctccttccaaggacgtacccggggaatatcgggttcgtttcccagggggaacaacacttggccagtgcgc 8764036  T
Q  233 atgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||||||||  || |  |||||||||||||| ||||| |||||||||| ||||||||||    
T  8764037 atgcctctacgcacgagccggattagtcgtccaccgttggtgggtcggaaaccggtgcgaaag 8764099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 136 - 295
Target Start/End: Original strand, 10422734 - 10422896
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttgggggga--aca-ttgaccggtgagc 232  Q
    |||| ||||||||||| |||||||||||||||| || ||| ||||||   ||||||||  |||||||||| || || || |  ||| ||| || ||| ||    
T  10422734 ccaagttgtttgggctacagtggcaaggagctccttccaatgacgtattcggggaataccgggttcgatttctaggaggaacaacacttggccagtgcgc 10422833  T
Q  233 atgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||||||||| || |  ||||||||||||||||||||| ||||||||| ||||||||||    
T  10422834 atgcctctacgcatgagccggattagtcgtccacctttggtaagtcggaaaccggtgcgaaag 10422896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 147 - 295
Target Start/End: Original strand, 26325769 - 26325920
Alignment:
Q  147 gggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggg--gaaca-ttgaccggtgagcatgcctctacg 243  Q
    ||||| |||||||||||||||| ||||||||||||| | | ||||||| ||||||||||||  | |||   |||| |||  | ||| |||||||||||||    
T  26325769 gggctccagtggcaaggagctcctttcaaggacgtatccgaggaatatcgggttcgattcccagcgggaacaacacttggtcagtgcgcatgcctctacg 26325868  T
Q  244 cattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    ||| || |  |||||||||||||| ||||| |||||||||| ||||||||||    
T  26325869 catgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 26325920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 136 - 295
Target Start/End: Complemental strand, 41664018 - 41663856
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggg--gaaca-ttgaccggtgagc 232  Q
    |||| ||||||||||| |||||||||||||||| ||  ||||||||| | ||||||||  ||||||||||||  |||||   |||| |||  | ||| ||    
T  41664018 ccaagttgtttgggctccagtggcaaggagctccttctaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggtcagtgcgc 41663919  T
Q  233 atgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||||||||| ||    |||||||||||||| ||||| |||||||||| ||||||||||    
T  41663918 atgcctctacgcatgagctggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 41663856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 136 - 295
Target Start/End: Original strand, 49078060 - 49078222
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttgggggga--aca-ttgaccggtgagc 232  Q
    |||| ||| ||||||| |||||||||||||||| ||  ||||||||| | ||||||||  ||||||||||||  ||||  |  ||| ||| || ||| ||    
T  49078060 ccaagttgcttgggctccagtggcaaggagctccttctaaggacgtatccggggaataccgggttcgattcccaggggaaacaacacttggccagtgcgc 49078159  T
Q  233 atgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||||||||| || |  ||||||||| |||| |||||||||||||||| ||||||||||    
T  49078160 atgcctctacgcatgagccggattagtcgttcaccattggtaggtcggaaaccggtgcgaaag 49078222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 136 - 284
Target Start/End: Complemental strand, 33418277 - 33418126
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca---ttgaccggtgagc 232  Q
    |||| ||||||||||| |||||||||||||||| || ||| |||||||| || |||||  || |||||||||| |||||||  |   ||| || ||| ||    
T  33418277 ccaagttgtttgggctccagtggcaaggagctccttccaaagacgtacccggagaataccggattcgattcctaggggggacaacgcttggccagtgcgc 33418178  T
Q  233 atgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaac 284  Q
    ||||||||| |||  || |  |||||||||||||||||||| ||||||||||    
T  33418177 atgcctctatgcacgagccggattagtcgtccacctttggtcggtcggaaac 33418126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 148 - 295
Target Start/End: Complemental strand, 9659328 - 9659179
Alignment:
Q  148 ggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgagcatgcctctacg 243  Q
    |||| |||||||||||||||||||  ||||||||||  ||||||||  ||||||||||||  ||||  ||||    |||||  ||| |||||||| ||||    
T  9659328 ggctccagtggcaaggagctcattctaaggacgtactcggggaataccgggttcgattcccagggg--aacaacgtttgactagtgcgcatgcctttacg 9659231  T
Q  244 cattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    ||| || |  |||||||||||||||||||| ||| |||||| ||||||||||    
T  9659230 catgagccggattagtcgtccacctttggtgggttggaaaccggtgcgaaag 9659179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 136 - 295
Target Start/End: Complemental strand, 11398050 - 11397889
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgag 231  Q
    |||| ||| ||||||| |||||||||||||||| || |||||| ||| | || |||||  ||||||||||||  | ||||||||    ||| ||  || |    
T  11398050 ccaagttgcttgggctccagtggcaaggagctccttccaaggatgtatccggagaataccgggttcgattcc--gaggggaacaacgtttggccaatgcg 11397953  T
Q  232 catgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
     |||||||||||||| ||||  |||||||||||||||||||| |||||||||  ||||||||||    
T  11397952 tatgcctctacgcatgagtcggattagtcgtccacctttggtgggtcggaaatcggtgcgaaag 11397889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 136 - 295
Target Start/End: Complemental strand, 15238268 - 15238106
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttgggg--ggaac-attgaccggtgagc 232  Q
    |||| ||| ||||||| || ||||||||||||| || ||||||||||||| |||||||| ||||||||||||  ||||  | |||  ||| ||  |||||    
T  15238268 ccaagttgcttgggctccaatggcaaggagctccttccaaggacgtacctagggaatatcgggttcgattcccagggggagcaacgcttggccaatgagc 15238169  T
Q  233 atgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||||||||  | ||| ||||||||  |||||||||| ||| |||||| ||| ||||||    
T  15238168 atgcctctacgcacgaatcatattagtcgctcacctttggtgggttggaaaccggttcgaaag 15238106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 136 - 295
Target Start/End: Original strand, 18915813 - 18915975
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggg--gaaca-ttgaccggtgagc 232  Q
    |||| ||||||||||| |||||||||||||||  || |||||||||||| ||||||||  ||||||||||||  |||||   |||| ||| || ||| ||    
T  18915813 ccaagttgtttgggcttcagtggcaaggagcttcttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggccagtgtgc 18915912  T
Q  233 atgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||||||||  || |  ||||||||  |||| ||||| ||| |||||| ||||||||||    
T  18915913 atgcctctacgcacgagccggattagtcgctcaccattggtgggttggaaaccggtgcgaaag 18915975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 136 - 295
Target Start/End: Original strand, 5855468 - 5855630
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgag 231  Q
    |||| ||||||||||| |||||||||||||||| || ||||||||||   ||||||||  ||||||||||||   || ||||||    ||| || ||| |    
T  5855468 ccaagttgtttgggctccagtggcaaggagctccttccaaggacgtattcggggaataccgggttcgattcc-caggaggaacaacgcttggccagtgcg 5855566  T
Q  232 catgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    ||||||||||||||| || |  ||||||||| ||||||| || |||||||||| | ||||||||    
T  5855567 catgcctctacgcatgaggcggattagtcgttcacctttagtgggtcggaaaccgatgcgaaag 5855630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 136 - 283
Target Start/End: Complemental strand, 12036906 - 12036756
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgag 231  Q
    |||| ||||||||||| | |||||||| ||||| || ||||||||||||| | ||||| |||||| ||||||| ||||| ||||    ||| || ||| |    
T  12036906 ccaagttgtttgggctccggtggcaagaagctccttccaaggacgtacctagagaatactgggtttgattcctaggggg-aacaatgcttggccagtgcg 12036808  T
Q  232 catgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaa 283  Q
    ||||||||||||||  || || |||| ||||||||||||||| | |||||||    
T  12036807 catgcctctacgcacgagccagattaatcgtccacctttggtggatcggaaa 12036756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 144 - 295
Target Start/End: Complemental strand, 45362036 - 45361882
Alignment:
Q  144 tttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgagcatgcctc 239  Q
    |||||||| |||||||||||||||| || ||||||||||||  |||||||  |||||||||| ||  || ||||||    ||| || ||| ||||||| |    
T  45362036 tttgggcttcagtggcaaggagctccttccaaggacgtaccctgggaataccgggttcgatt-ctcaggaggaacaacgcttggccagtgcgcatgccac 45361938  T
Q  240 tacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    ||||||| || |  ||||||||| ||||||| || |||||||||| ||||||||||    
T  45361937 tacgcataagccggattagtcgttcacctttagtgggtcggaaaccggtgcgaaag 45361882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 141 - 214
Target Start/End: Complemental strand, 892454 - 892381
Alignment:
Q  141 ttgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggg 214  Q
    ||||||||||| |||||||||||||||| |||||||||||||   ||||||||  ||||||||||||| |||||    
T  892454 ttgtttgggcttcagtggcaaggagctcctttcaaggacgtattcggggaataccgggttcgattcctaggggg 892381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 141 - 207
Target Start/End: Original strand, 32822 - 32888
Alignment:
Q  141 ttgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 207  Q
    ||||||||||| ||||||||| |||||| || |||||||||||| ||||||||| |||| |||||||    
T  32822 ttgtttgggctccagtggcaatgagctccttccaaggacgtaccgggggaatatcgggtccgattcc 32888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 144 - 295
Target Start/End: Complemental strand, 30927881 - 30927727
Alignment:
Q  144 tttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgagcatgcctc 239  Q
    ||||| || |||||||||||||||| || |||||||||||||||| ||||| |||||||||| |   | |||||||    ||| ||  || |||||||||    
T  30927881 tttggactccagtggcaaggagctccttccaaggacgtacctgggaaatatcgggttcgatttc-cagagggaacaacgcttggccaatgtgcatgcctc 30927783  T
Q  240 tacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    ||||||| || |  ||||||||||||| |||||| |||| ||||| ||||| ||||    
T  30927782 tacgcatgagccggattagtcgtccacttttggtgggtcagaaaccggtgcaaaag 30927727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 145 - 295
Target Start/End: Complemental strand, 43959974 - 43959821
Alignment:
Q  145 ttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgagcatgcctct 240  Q
    ||||||| ||||||||||| |||| || ||| |||||||| ||||||||| |||||| |||||   |||||||||    ||| || ||| ||||||||||    
T  43959974 ttgggctccagtggcaaggtgctccttccaatgacgtacccggggaatatcgggttcaattcc-cagggggaacaacgcttggccagtgcgcatgcctct 43959876  T
Q  241 acgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||  || |  |||||||| |||||||| || | |||||||| ||||||||||    
T  43959875 acgcacgagccggattagtcgcccacctttagtggatcggaaaccggtgcgaaag 43959821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 50503505 - 50503361
Alignment:
Q  154 agtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggg--gaaca-ttgaccggtgagcatgcctctacgcattagt 250  Q
    |||||| |||||||| ||||||||||||| | ||||||||| ||||||||||||  |||||   |||| |||||| ||| |||||||||||||||  ||     
T  50503505 agtggcgaggagctcctttcaaggacgtatccggggaatatcgggttcgattcccagggggaacaacacttgaccagtgcgcatgcctctacgcacgagc 50503406  T
Q  251 caaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |  ||| |||| |||||  |||| |||||||||| | ||||||||    
T  50503405 cggatttgtcgcccaccaatggtgggtcggaaaccgatgcgaaag 50503361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 154 - 206
Target Start/End: Complemental strand, 17358615 - 17358563
Alignment:
Q  154 agtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattc 206  Q
    |||||||||||||||||||||||||||||  |||||||||  |||||||||||    
T  17358615 agtggcaaggagctcatttcaaggacgtatttggggaataccgggttcgattc 17358563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 231 - 295
Target Start/End: Complemental strand, 35211236 - 35211172
Alignment:
Q  231 gcatgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||||||||||| ||   ||||||||||||||||||||| |||||||||| |||| |||||    
T  35211236 gcatgcctctacgcatgagctgaattagtcgtccacctttggtgggtcggaaaccggtgtgaaag 35211172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 136 - 295
Target Start/End: Complemental strand, 2981093 - 2980931
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggg--gaaca-ttgaccggtgagc 232  Q
    |||| ||| |||||||  ||||||||||||||| || || ||||||| | |||||||| |||||||||||||  | |||   |||| ||| || ||| ||    
T  2981093 ccaagttgcttgggctctagtggcaaggagctccttccagggacgtatccggggaatactgggttcgattcccagcgggaacaacacttggccagtgtgc 2980994  T
Q  233 atgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||||||||  ||||  ||||||||||||  ||| || |||||||||  ||||||||||    
T  2980993 atgcctctacgcacgagtcggattagtcgtccatgtttagtgggtcggaaatcggtgcgaaag 2980931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 136 - 207
Target Start/End: Original strand, 51437415 - 51437486
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 207  Q
    |||| ||||||||||| ||||| ||| |||||| ||||||||||||| | | ||||||| ||||||||||||    
T  51437415 ccaagttgtttgggcttcagtgacaatgagctcctttcaaggacgtatccgaggaatatcgggttcgattcc 51437486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 154 - 207
Target Start/End: Complemental strand, 34334439 - 34334386
Alignment:
Q  154 agtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 207  Q
    |||||||||||||||||| |||||||||| | ||||||||  ||||||||||||    
T  34334439 agtggcaaggagctcattccaaggacgtatccggggaataccgggttcgattcc 34334386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 136 - 205
Target Start/End: Complemental strand, 48798232 - 48798163
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgatt 205  Q
    |||| ||||| ||||| |||||||||||||||| || ||| |||||| | ||||||||| ||||||||||    
T  48798232 ccaagttgttggggctccagtggcaaggagctccttccaatgacgtatccggggaatatcgggttcgatt 48798163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 141 - 298
Target Start/End: Original strand, 2567227 - 2567387
Alignment:
Q  141 ttgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgagcatgc 236  Q
    ||||||||||| || ||||||||||||| || ||||||||||   || |||||  ||||||||||  | ||||  ||||    ||| || ||| ||||||    
T  2567227 ttgtttgggcttcactggcaaggagctccttccaaggacgtattcggagaataccgggttcgattt-tcggggaaaacaacgcttggccagtgcgcatgc 2567325  T
Q  237 ctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaagaaa 298  Q
    |||||| ||  ||||| ||||| |||||| ||||||| |||||||||| ||| |||||||||    
T  2567326 ctctactcacgagtcagattagccgtccatctttggtgggtcggaaaccggtacgaaagaaa 2567387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 231 - 295
Target Start/End: Complemental strand, 4581746 - 4581682
Alignment:
Q  231 gcatgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||||||||||  || |  | |||||||||||||||||| |||||||||| ||||||||||    
T  4581746 gcatgcctctacgcacgagccggaatagtcgtccacctttggtgggtcggaaaccggtgcgaaag 4581682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 10173128 - 10173076
Alignment:
Q  141 ttgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaata 193  Q
    ||||||||||| ||||||||||| |||| || |||||||||| ||||||||||    
T  10173128 ttgtttgggctccagtggcaaggtgctccttccaaggacgtatctggggaata 10173076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 231 - 295
Target Start/End: Original strand, 26660182 - 26660245
Alignment:
Q  231 gcatgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||||||||||| || |  |||||||| ||||||||||| |||||||||| ||||||||||    
T  26660182 gcatgcctctacgcatgagccggattagtcg-ccacctttggtgggtcggaaaccggtgcgaaag 26660245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 141 - 213
Target Start/End: Complemental strand, 47313055 - 47312983
Alignment:
Q  141 ttgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttgggg 213  Q
    ||||||||||| ||||||||| ||| || || |||||||||| ||||||||||  ||||| ||||||| ||||    
T  47313055 ttgtttgggctccagtggcaacgagatccttccaaggacgtatctggggaataccgggtttgattcctagggg 47312983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 206
Target Start/End: Complemental strand, 5063986 - 5063935
Alignment:
Q  155 gtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattc 206  Q
    |||||||| ||||| || |||||||||| |||||||||||||| ||||||||    
T  5063986 gtggcaagaagctccttccaaggacgtatctggggaatattggattcgattc 5063935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 295
Target Start/End: Original strand, 5504076 - 5504139
Alignment:
Q  232 catgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    ||||||||||||||| || |  |||||||||||||||||| | |||||||||| ||| ||||||    
T  5504076 catgcctctacgcatgagccggattagtcgtccacctttgatgggtcggaaaccggtacgaaag 5504139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 10173034 - 10172971
Alignment:
Q  232 catgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    ||||||||||||||| || |  |||| ||| ||||||||||| |||||||||| ||||||||||    
T  10173034 catgcctctacgcatgagccggattactcgcccacctttggtgggtcggaaaccggtgcgaaag 10172971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 141 - 207
Target Start/End: Complemental strand, 1764346 - 1764280
Alignment:
Q  141 ttgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 207  Q
    ||||||||||| | |||||||||||||| || |||||||||||| ||| ||||  || |||||||||    
T  1764346 ttgtttgggcttctgtggcaaggagctccttccaaggacgtacccgggaaataccggattcgattcc 1764280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 136 - 206
Target Start/End: Original strand, 5503977 - 5504047
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattc 206  Q
    |||| ||||||||| | |||||||||||||||| || | || ||||| |||||||||||  ||||||||||    
T  5503977 ccaagttgtttgggttccagtggcaaggagctccttccgagaacgtatctggggaatatcaggttcgattc 5504047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 136 - 273
Target Start/End: Original strand, 31152662 - 31152802
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca---ttgaccggtgagc 232  Q
    |||| |||||||||||  ||||||||||||||| || |||||| |||||  |||||||  |||||||||| |  ||||| |  |   |||  | ||| ||    
T  31152662 ccaagttgtttgggctctagtggcaaggagctctttccaaggatgtacccagggaataccgggttcgatttcccgggggaataacgcttggtcagtgcgc 31152761  T
Q  233 atgcctctacgcattagtcaaattagtcgtccacctttggt 273  Q
     ||||||||| ||  ||||||||||||||||||||||||||    
T  31152762 gtgcctctacacacgagtcaaattagtcgtccacctttggt 31152802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 295
Target Start/End: Complemental strand, 1764238 - 1764197
Alignment:
Q  254 attagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||| ||||||||| |||||||||||||| ||||||||    
T  1764238 attagtcgcccacctttgataggtcggaaactgatgcgaaag 1764197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 232 - 297
Target Start/End: Original strand, 26258740 - 26258805
Alignment:
Q  232 catgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaagaa 297  Q
    ||||||| ||||||| ||||  |||| |||||||||||| || ||| |||||||||||| ||||||    
T  26258740 catgcctttacgcatgagtcggattaatcgtccacctttagtgggttggaaactggtgcaaaagaa 26258805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 295
Target Start/End: Original strand, 37339802 - 37339928
Alignment:
Q  173 caaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgagcatgcctctacgcattagtcaaattagtcgtccacct 268  Q
    |||||| ||||| ||||||||  ||||||||||||  |||||| |||    ||| || ||| ||||||||| |||||  || |  |||||||| ||||||    
T  37339802 caaggatgtacccggggaataccgggttcgattcccagggggggacaacgcttggccagtgcgcatgcctcaacgcacgagccggattagtcgcccacct 37339901  T
Q  269 ttggtaggtcggaaactggtgcgaaag 295  Q
    ||||| ||| |||||| ||||||||||    
T  37339902 ttggtgggttggaaaccggtgcgaaag 37339928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 284
Target Start/End: Complemental strand, 42710202 - 42710149
Alignment:
Q  231 gcatgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaac 284  Q
    |||||||||||||||| |  | ||||||||||||||| ||||||| ||||||||    
T  42710202 gcatgcctctacgcataaaccgaattagtcgtccaccattggtagatcggaaac 42710149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 298
Target Start/End: Complemental strand, 45726491 - 45726430
Alignment:
Q  237 ctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaagaaa 298  Q
    |||||||||| || |  ||||||||| |||||||||| | ||||| ||||||||||||||||    
T  45726491 ctctacgcatgagccggattagtcgttcacctttggtggatcggagactggtgcgaaagaaa 45726430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 295
Target Start/End: Original strand, 51437524 - 51437565
Alignment:
Q  254 attagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    ||||||| |||||||||||| |||||||||| ||||||||||    
T  51437524 attagtcatccacctttggtgggtcggaaaccggtgcgaaag 51437565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 145 - 213
Target Start/End: Complemental strand, 9853430 - 9853362
Alignment:
Q  145 ttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttgggg 213  Q
    ||||||| |||||||||||||||| || |||||| ||||| ||  ||||  ||||||||||||| ||||    
T  9853430 ttgggctccagtggcaaggagctccttccaaggatgtacccggaaaataccgggttcgattcctagggg 9853362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 141 - 181
Target Start/End: Complemental strand, 32151079 - 32151039
Alignment:
Q  141 ttgtttgggctgcagtggcaaggagctcatttcaaggacgt 181  Q
    ||||||||||| |||||||||||||||| || |||||||||    
T  32151079 ttgtttgggctccagtggcaaggagctccttccaaggacgt 32151039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 136 - 208
Target Start/End: Original strand, 34877936 - 34878008
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcct 208  Q
    |||| ||||||||||| |||||||||||||| | || ||||||||||   ||||||||   ||||||||||||    
T  34877936 ccaagttgtttgggcttcagtggcaaggagcaccttccaaggacgtattcggggaataccaggttcgattcct 34878008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 231 - 295
Target Start/End: Original strand, 50094948 - 50095012
Alignment:
Q  231 gcatgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||| ||||||||| ||||  |||||||||||||| || || |||||||||| ||||| ||||    
T  50094948 gcatgcttctacgcatgagtcggattagtcgtccaccattagtgggtcggaaaccggtgcaaaag 50095012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 8e-25; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 136 - 295
Target Start/End: Original strand, 52950032 - 52950194
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgag 231  Q
    |||| |||||||||||  ||||||||||||||| || |||||||||||||||||||||| ||||||||||||   |||||||||    ||| || ||| |    
T  52950032 ccaagttgtttgggctctagtggcaaggagctccttccaaggacgtacctggggaatatcgggttcgattcc-cagggggaacaacgcttggccagtgcg 52950130  T
Q  232 catgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||| |||||| ||| |  || |||||||||||||||||||| |||||||||| | ||||||||    
T  52950131 catgactctacacatgaaccagattagtcgtccacctttggtgggtcggaaaccgatgcgaaag 52950194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 136 - 298
Target Start/End: Original strand, 2559257 - 2559422
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgag 231  Q
    |||| ||||||||||| ||||||||| |||||| || |||||||||||||||||||||  || ||||||| | | || ||||||    ||| || ||| |    
T  2559257 ccaagttgtttgggctccagtggcaacgagctccttccaaggacgtacctggggaataccggattcgatttc-taggaggaacaacgcttggccagtgcg 2559355  T
Q  232 catgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaagaaa 298  Q
    ||||||||||||||  || |  |||| ||||||||||||||| |||||||||| |||||||||||||    
T  2559356 catgcctctacgcacaagccggattactcgtccacctttggtgggtcggaaaccggtgcgaaagaaa 2559422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 136 - 295
Target Start/End: Original strand, 29895737 - 29895899
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggg--gaaca-ttgaccggtgagc 232  Q
    |||| ||| ||||||| |||||||||||||||| || |||||||||| | ||||||||  ||||||||||||  |||||   |||| ||| || ||| ||    
T  29895737 ccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgc 29895836  T
Q  233 atgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||||||||| || |  |||||||||||||| ||||| | |||||||| ||||||||||    
T  29895837 atgcctctacgcatgagccggattagtcgtccaccattggtggttcggaaaccggtgcgaaag 29895899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 295
Target Start/End: Complemental strand, 5473004 - 5472847
Alignment:
Q  141 ttgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgagcatgc 236  Q
    ||||||||||| |||||||||||||||||||||||||||||| | ||||||||   |||| |||| ||  |||| ||||    ||| || ||| ||||||    
T  5473004 ttgtttgggctccagtggcaaggagctcatttcaaggacgtatccggggaataccaggtttgatt-ctcaggggaaacaacgcttggccagtgcgcatgc 5472906  T
Q  237 ctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||||  || |  |||||||| ||||||||||| ||||| |||||||||||||||    
T  5472905 ctctacgcacgagccggattagtcgcccacctttggtgggtcgaaaactggtgcgaaag 5472847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 232 - 295
Target Start/End: Original strand, 16450349 - 16450412
Alignment:
Q  232 catgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    ||||||||||||||| || || ||||||||||||||||||||||||||||||| ||||||||||    
T  16450349 catgcctctacgcatgagccagattagtcgtccacctttggtaggtcggaaaccggtgcgaaag 16450412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 136 - 295
Target Start/End: Original strand, 38165977 - 38166139
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgag 231  Q
    |||| ||||||||||| || ||||||||||||| || |||||||||| | |||||||| |||||| ||||||   |||||||||    ||| || ||| |    
T  38165977 ccaagttgtttgggctccactggcaaggagctccttccaaggacgtatccggggaatactgggttggattcc-cagggggaacaacgcttggccagtgcg 38166075  T
Q  232 catgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||| |||||||||  || |  |||||||| ||||||||||| |||||||||| ||||||||||    
T  38166076 catggctctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaag 38166139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 173 - 295
Target Start/End: Complemental strand, 7246770 - 7246645
Alignment:
Q  173 caaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgagcatgcctctacgcattagtcaaattagtcgtccacct 268  Q
    |||||||||||| |||||||| |||||||||||||| | ||| ||||    ||| || ||| |||||||||||||||| || |  |||||||| ||||||    
T  7246770 caaggacgtacccggggaatactgggttcgattcctagtggg-aacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgcccacct 7246672  T
Q  269 ttggtaggtcggaaactggtgcgaaag 295  Q
    ||||| |||||||||| ||||||||||    
T  7246671 ttggtgggtcggaaaccggtgcgaaag 7246645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 136 - 295
Target Start/End: Original strand, 53599010 - 53599172
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgag 231  Q
    |||| ||||||||||| || ||||||||||||| || |||||||||||| ||||||||  ||||||||||||   || ||||||    ||| || ||| |    
T  53599010 ccaagttgtttgggctccattggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcc-caggaggaacaacgtttggccagtgcg 53599108  T
Q  232 catgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    ||||||||||||||| || |  |||| |||| ||||||| || | |||||||| ||||||||||    
T  53599109 catgcctctacgcatgagccggattaatcgttcacctttagtggatcggaaaccggtgcgaaag 53599172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 136 - 292
Target Start/End: Complemental strand, 1940935 - 1940779
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaacattg-accggtgagcat 234  Q
    |||| |||||||||||  ||||||||||||||| || |||||||||||| ||| ||||| ||||||||||||   |||||||||  |    |||| ||||    
T  1940935 ccaagttgtttgggctctagtggcaaggagctccttccaaggacgtacccgggaaatatcgggttcgattcc-cagggggaacaacgcttgggtgcgcat 1940837  T
Q  235 gcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcga 292  Q
    |||||||||||  || |  |||||||| ||||||||||| ||||| |||| |||||||    
T  1940836 gcctctacgcacgagccggattagtcgcccacctttggtgggtcgaaaaccggtgcga 1940779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 145 - 294
Target Start/End: Complemental strand, 6032792 - 6032643
Alignment:
Q  145 ttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaacattgaccggtgagcatgcctctacgc 244  Q
    ||||||| |||||||||||||||| || |||||||||||| ||||||||  |||||| |||    || || |   |||||| |||  ||||||||||||     
T  6032792 ttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcaattttcaggaggtacgcttgaccagtgctcatgcctctacga 6032693  T
Q  245 attagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaa 294  Q
    || || |  |||||||||| ||||||||| |||||||||| |||||||||    
T  6032692 atgagccggattagtcgtctacctttggtgggtcggaaaccggtgcgaaa 6032643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 136 - 273
Target Start/End: Original strand, 6779161 - 6779301
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggg--gaaca-ttgaccggtgagc 232  Q
    |||| ||||||||||| |||||||||||||||  || ||||||||||||||| |||||  ||||||||||||  |||||   ||||  || || ||| ||    
T  6779161 ccaagttgtttgggctccagtggcaaggagcttcttccaaggacgtacctggagaataccgggttcgattcccagggggaacaacacctggccagtgcgc 6779260  T
Q  233 atgcctctacgcattagtcaaattagtcgtccacctttggt 273  Q
    ||||||||| |||| || |  ||||||||||||||||||||    
T  6779261 atgcctctatgcatgagccggattagtcgtccacctttggt 6779301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 136 - 289
Target Start/End: Original strand, 8888972 - 8889128
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggg--gaaca-ttgaccggtgagc 232  Q
    |||| |||||||||||  || |||||||||||| ||  ||||||||| | ||||||||  ||||||||||||| |||||   |||| |||  | ||| ||    
T  8888972 ccaagttgtttgggctctagcggcaaggagctccttctaaggacgtatccggggaataccgggttcgattcctagggggaacaacacttgggcagtgcgc 8889071  T
Q  233 atgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtg 289  Q
    ||| |||||||||| || |  |||||||||||||||||||| |||||||||| ||||    
T  8889072 atggctctacgcatgagccggattagtcgtccacctttggtgggtcggaaaccggtg 8889128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 136 - 267
Target Start/End: Original strand, 1446776 - 1446910
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggg--gaaca-ttgaccggtgagc 232  Q
    |||| ||| ||||||| |||||||||||||||| || |||||||||| | ||||||||  ||||||||||||  |||||   |||| ||| || ||| ||    
T  1446776 ccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgc 1446875  T
Q  233 atgcctctacgcattagtcaaattagtcgtccacc 267  Q
    |||||||||||||| || |  ||||||||||||||    
T  1446876 atgcctctacgcatgagccggattagtcgtccacc 1446910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 231 - 298
Target Start/End: Original strand, 21429349 - 21429416
Alignment:
Q  231 gcatgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaagaaa 298  Q
    |||||||||||||||  ||||| | |||||||||||||||||| |||||||||| |||||||| ||||    
T  21429349 gcatgcctctacgcacgagtcagactagtcgtccacctttggtgggtcggaaaccggtgcgaatgaaa 21429416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 136 - 207
Target Start/End: Original strand, 24166400 - 24166471
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 207  Q
    |||| ||| ||||||| |||||||||||||||| || |||||||||||  |||||||| |||||||||||||    
T  24166400 ccaagttgattgggctccagtggcaaggagctccttccaaggacgtactcggggaatactgggttcgattcc 24166471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 231 - 298
Target Start/End: Original strand, 27248474 - 27248541
Alignment:
Q  231 gcatgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaagaaa 298  Q
    |||||||||||||||  || || |||||||| |||||||||||||||| |||||||||| ||||||||    
T  27248474 gcatgcctctacgcaggagccagattagtcgcccacctttggtaggtcagaaactggtgtgaaagaaa 27248541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 155 - 295
Target Start/End: Complemental strand, 36145357 - 36145214
Alignment:
Q  155 gtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgagcatgcctctacgcattagt 250  Q
    ||||||||||||||||| |||||||||||| ||||||||  ||||||||||||   |||| ||||    |||| | ||| |||||||||||| ||| ||     
T  36145357 gtggcaaggagctcattccaaggacgtacccggggaataccgggttcgattcc-caggggaaacaacgcttgatcagtgcgcatgcctctacacatgagc 36145259  T
Q  251 caaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |  |||||||||||||||||| |   |||||||| ||||||||||    
T  36145258 cggattagtcgtccacctttgatgaatcggaaaccggtgcgaaag 36145214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 231 - 294
Target Start/End: Complemental strand, 40780924 - 40780861
Alignment:
Q  231 gcatgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaa 294  Q
    |||||||||||||||| || |  |||||||||||||||||||| |||||||||| |||||||||    
T  40780924 gcatgcctctacgcatgagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaa 40780861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 136 - 295
Target Start/End: Original strand, 55920984 - 55921146
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggg--gaaca-ttgaccggtgagc 232  Q
    |||| ||| ||||||| |||||||||||||||| || |||||||| ||| ||||||||  ||||||||||||  |||||   |||| |||  | ||| ||    
T  55920984 ccaagttgcttgggctccagtggcaaggagctccttccaaggacgcacccggggaataccgggttcgattcccagggggaacaacacttggtcagtgcgc 55921083  T
Q  233 atgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    ||||||||||| || || |  |||| |||  |||||||||| |||||||||| ||||||||||    
T  55921084 atgcctctacgtatgagccggattaatcgctcacctttggtgggtcggaaaccggtgcgaaag 55921146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 136 - 294
Target Start/End: Original strand, 13073488 - 13073649
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgag 231  Q
    |||| |||||||||||  |||||||| |||||| || ||||||||||||||| |||||  | ||||||||||    ||||||||    ||| || ||| |    
T  13073488 ccaagttgtttgggctctagtggcaatgagctccttccaaggacgtacctggagaataccgagttcgattcc-catggggaacaatgtttggccagtgcg 13073586  T
Q  232 catgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaa 294  Q
    ||| ||||||||||| |  || |||||||||  ||||||||| |||||||||| |||||||||    
T  13073587 catacctctacgcatgaaccagattagtcgtttacctttggtgggtcggaaaccggtgcgaaa 13073649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 141 - 206
Target Start/End: Original strand, 13552069 - 13552134
Alignment:
Q  141 ttgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattc 206  Q
    ||||||||||| |||||||||||||||| || |||| ||||| | ||||||||| |||||||||||    
T  13552069 ttgtttgggctccagtggcaaggagctccttccaagcacgtatccggggaatatcgggttcgattc 13552134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 136 - 205
Target Start/End: Original strand, 33647671 - 33647740
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgatt 205  Q
    |||| ||| |||||||  ||||||||||||||| ||||||||||||| ||||||||||  ||||||||||    
T  33647671 ccaagttgcttgggctctagtggcaaggagctcctttcaaggacgtatctggggaataccgggttcgatt 33647740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 231 - 295
Target Start/End: Original strand, 4738666 - 4738730
Alignment:
Q  231 gcatgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    ||||| |||||||||| ||   ||||||||||||||||||||| |||||||||| ||||||||||    
T  4738666 gcatgtctctacgcatgagctgaattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 4738730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 136 - 192
Target Start/End: Original strand, 14567201 - 14567257
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaat 192  Q
    |||| ||| ||||||| ||||||||||||||||||| |||||||||||| |||||||    
T  14567201 ccaagttgcttgggctccagtggcaaggagctcattccaaggacgtacccggggaat 14567257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 148 - 208
Target Start/End: Complemental strand, 15840083 - 15840023
Alignment:
Q  148 ggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcct 208  Q
    |||| |||||||||||||||| || ||||||||||| |||||||||  |||||||||||||    
T  15840083 ggctccagtggcaaggagctccttccaaggacgtacttggggaataccgggttcgattcct 15840023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 136 - 204
Target Start/End: Complemental strand, 34667763 - 34667695
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgat 204  Q
    |||| |||||||||||  ||||||||||||||| || |||||||||||| ||||||||  |||||||||    
T  34667763 ccaagttgtttgggctctagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgat 34667695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 145 - 284
Target Start/End: Original strand, 20421733 - 20421874
Alignment:
Q  145 ttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggg--gaaca-ttgaccggtgagcatgcctcta 241  Q
    ||||||| |||||||||||||||| |||||| |||||| |||||||||| | ||||||||| |  |||||   |||| ||| || ||| |||||||||||    
T  20421733 ttgggcttcagtggcaaggagctcctttcaaagacgtatctggggaatact-ggttcgatttccagggggaacaacacttggccagtgcgcatgcctcta 20421831  T
Q  242 cgcattagtcaaattagtcgtccacctttggtaggtcggaaac 284  Q
    ||||| || || |||| ||||||| | ||| | ||||||||||    
T  20421832 cgcatgagccagattaatcgtccatcattgatgggtcggaaac 20421874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 136 - 207
Target Start/End: Original strand, 47078408 - 47078479
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 207  Q
    |||| ||| ||||| | |||||||||||||||| || |||||||||||| ||||||||  ||||||||||||    
T  47078408 ccaagttgcttgggttccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcc 47078479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 136 - 295
Target Start/End: Original strand, 38075383 - 38075545
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgag 231  Q
    |||| ||||||||||| ||| ||||||||| || || ||||||||||   || |||||  ||||||||||| |  |||| ||||    ||| || ||| |    
T  38075383 ccaagttgtttgggctccagcggcaaggagttccttccaaggacgtattcggagaataccgggttcgattc-tcaggggaaacaacgcttggccagtgcg 38075481  T
Q  232 catgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    ||||||||||||||| || | ||||| | ||||||||||||| |||||||||| | ||||||||    
T  38075482 catgcctctacgcatgagccgaattaattgtccacctttggtgggtcggaaaccgatgcgaaag 38075545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 136 - 193
Target Start/End: Complemental strand, 3574607 - 3574550
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaata 193  Q
    |||| ||| ||||||| |||||||||||||||| || ||||||||||||| |||||||    
T  3574607 ccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacctagggaata 3574550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 231 - 295
Target Start/End: Original strand, 16645166 - 16645230
Alignment:
Q  231 gcatgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||||||| ||| ||||  |||||||| |||||| |||| |||||||||| ||||||||||    
T  16645166 gcatgcctctacacatgagtctgattagtcgcccacctgtggtgggtcggaaaccggtgcgaaag 16645230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 207
Target Start/End: Original strand, 7000474 - 7000545
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 207  Q
    |||| ||||||||||| |||||||||| ||||| || |||||||||||  ||||||||  | ||||||||||    
T  7000474 ccaagttgtttgggctacagtggcaagaagctccttccaaggacgtactcggggaataccgagttcgattcc 7000545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 207
Target Start/End: Complemental strand, 27531818 - 27531747
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 207  Q
    |||| ||| |||| || |||||||||||||||| || ||||||||||||  |||||||  ||||||||||||    
T  27531818 ccaagttgcttggactccagtggcaaggagctccttccaaggacgtacccagggaataccgggttcgattcc 27531747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 207
Target Start/End: Original strand, 31588634 - 31588705
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 207  Q
    |||| ||||||||||| ||||| |||||||||| ||  |||||||||   ||||||||||||||| ||||||    
T  31588634 ccaagttgtttgggcttcagtgtcaaggagctcgttctaaggacgtattcggggaatattgggtttgattcc 31588705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 203
Target Start/End: Complemental strand, 41339556 - 41339489
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcga 203  Q
    |||| |||||||||||  ||||||||||||||| || |||||||||||| || |||||  ||||||||    
T  41339556 ccaagttgtttgggctctagtggcaaggagctccttccaaggacgtacccggagaataccgggttcga 41339489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 294
Target Start/End: Original strand, 14859328 - 14859402
Alignment:
Q  220 ttgaccggtgagcatgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaa 294  Q
    |||||| ||| ||||| |||||||||  || || ||||||| |||||||||| |  |||||||||||||||||||    
T  14859328 ttgaccagtgcgcatgtctctacgcacgagccagattagtcatccacctttgatgtgtcggaaactggtgcgaaa 14859402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 136 - 206
Target Start/End: Complemental strand, 26480110 - 26480040
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattc 206  Q
    |||| ||||||||||| || ||||||||||||| || |||| |||||| |||||||||  | |||||||||    
T  26480110 ccaagttgtttgggctccactggcaaggagctccttccaagtacgtacatggggaataccgagttcgattc 26480040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 145 - 207
Target Start/End: Original strand, 29588695 - 29588757
Alignment:
Q  145 ttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 207  Q
    ||||||| ||||||||||||||||||| ||| ||||| || ||| ||||  ||||||||||||    
T  29588695 ttgggctccagtggcaaggagctcattccaaagacgtgcccgggaaataccgggttcgattcc 29588757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 298
Target Start/End: Complemental strand, 2686496 - 2686451
Alignment:
Q  253 aattagtcgtccacctttggtaggtcggaaactggtgcgaaagaaa 298  Q
    |||||||||||||||||| || ||| |||||| |||||||||||||    
T  2686496 aattagtcgtccaccttttgtgggttggaaaccggtgcgaaagaaa 2686451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 284
Target Start/End: Original strand, 46108739 - 46108792
Alignment:
Q  231 gcatgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaac 284  Q
    |||||||||||||||| || || ||||||||||||| |||| | ||||||||||    
T  46108739 gcatgcctctacgcatgagccagattagtcgtccacttttgatgggtcggaaac 46108792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 156 - 208
Target Start/End: Original strand, 38168227 - 38168279
Alignment:
Q  156 tggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcct 208  Q
    ||||||||||||| || |||||||||||| ||||||||   ||||||||||||    
T  38168227 tggcaaggagctccttccaaggacgtacccggggaataccaggttcgattcct 38168279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 231 - 283
Target Start/End: Complemental strand, 38841431 - 38841379
Alignment:
Q  231 gcatgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaa 283  Q
    ||||| |||||||||| ||||  |||||||||||| ||||||||| |||||||    
T  38841431 gcatgtctctacgcatgagtcggattagtcgtccatctttggtagttcggaaa 38841379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 231 - 295
Target Start/End: Complemental strand, 42722640 - 42722576
Alignment:
Q  231 gcatgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||||||||||| || |  ||||||||| ||||||| || ||||| |||| ||||||||||    
T  42722640 gcatgcctctacgcatgagccggattagtcgttcacctttagtgggtcgaaaaccggtgcgaaag 42722576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 255 - 295
Target Start/End: Complemental strand, 47682421 - 47682381
Alignment:
Q  255 ttagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    ||||||| ||||||||||| |||||||||| ||||||||||    
T  47682421 ttagtcgcccacctttggtgggtcggaaaccggtgcgaaag 47682381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 2e-22; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 136 - 295
Target Start/End: Complemental strand, 3418674 - 3418512
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgag 231  Q
    |||| |||||||| || | |||||||||||||| || |||||||||| ||||||||||| ||||||||||  || || ||||||    ||| || ||| |    
T  3418674 ccaagttgtttggactcccgtggcaaggagctccttccaaggacgtatctggggaatatcgggttcgatt-tttaggaggaacaacacttggccagtgcg 3418576  T
Q  232 catgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    ||||| ||||||||| ||||| ||||||||||||||||| || |||| ||||| ||||||||||    
T  3418575 catgcgtctacgcatgagtcagattagtcgtccacctttagtgggtcagaaaccggtgcgaaag 3418512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 136 - 295
Target Start/End: Original strand, 10927555 - 10927717
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgag 231  Q
    |||| ||| ||||||| |||||||||||||||  ||||||||||||||| ||||||||  |||||||||||| | || ||||||    ||| || ||| |    
T  10927555 ccaagttgcttgggcttcagtggcaaggagcttctttcaaggacgtacccggggaataccgggttcgattcc-taggaggaacaacgcttggccagtgcg 10927653  T
Q  232 catgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    ||||||||||||||| || |  ||||||||| ||||||| || |||||||||| | ||||||||    
T  10927654 catgcctctacgcatgagccggattagtcgttcacctttagtgggtcggaaaccgatgcgaaag 10927717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 136 - 294
Target Start/End: Complemental strand, 15884716 - 15884556
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttgggg-ggaaca-ttgaccggtgagca 233  Q
    |||| ||| ||||||| |||||| ||||||||| || |||||||||||||||||||||  ||||||||||||  ||||   |||| ||| |  ||| |||    
T  15884716 ccaagttgattgggctccagtggtaaggagctccttccaaggacgtacctggggaataccgggttcgattcccaggggaacaacacttggcaagtgcgca 15884617  T
Q  234 tgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaa 294  Q
    ||||||||||||  || |  |||||||| ||||||||||| |||||||||| |||||||||    
T  15884616 tgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaa 15884556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 141 - 270
Target Start/End: Complemental strand, 33401955 - 33401823
Alignment:
Q  141 ttgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgagcatgc 236  Q
    ||||||||||| |||||||||||||||| ||||||||||||||  ||||||||  ||||||||||  |  |||||||||    |||||| ||| ||||||    
T  33401955 ttgtttgggctccagtggcaaggagctcctttcaaggacgtactcggggaataccgggttcgatt-ttcagggggaacaacacttgaccagtgtgcatgc 33401857  T
Q  237 ctctacgcattagtcaaattagtcgtccaccttt 270  Q
    |||||||||| ||||  |||||||| ||||||||    
T  33401856 ctctacgcatgagtcggattagtcgcccaccttt 33401823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 136 - 295
Target Start/End: Original strand, 14846525 - 14846686
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaacattgaccggtgag---- 231  Q
    |||| ||||||||||| || ||||||| ||||| ||  ||||||||||| ||||||||  |||||||||||  |  |||||||| |||  ||| ||        
T  14846525 ccaagttgtttgggctccactggcaagaagctccttctaaggacgtacccggggaataccgggttcgattc--tcaggggaacaatgattggtcagtgcg 14846622  T
Q  232 catgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    ||||||||||||||| ||||| || ||||||||||||||||| |||||||||  ||||||||||    
T  14846623 catgcctctacgcatgagtcagataagtcgtccacctttggtgggtcggaaatcggtgcgaaag 14846686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 136 - 295
Target Start/End: Original strand, 43027254 - 43027416
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggg--gaac-attgaccggtgagc 232  Q
    |||| ||||||||||| ||||||||| |||||||||||||| |||||  ||||||||| |||||||||||||  || ||   ||| |||| ||  || ||    
T  43027254 ccaagttgtttgggctccagtggcaatgagctcatttcaagaacgtatttggggaatactgggttcgattcccaggaggaacaacgattgtccaatgcgc 43027353  T
Q  233 atgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||||||||| || |  |||||||||||| ||||| | |||||||||| | ||||||||    
T  43027354 atgcctctacgcatgagccggattagtcgtccatctttgatgggtcggaaaccgatgcgaaag 43027416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 145 - 295
Target Start/End: Original strand, 17981399 - 17981552
Alignment:
Q  145 ttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgagcatgcctct 240  Q
    ||||||| |||||||||||||||| || |||||| ||||| ||| ||||  ||||||||||||  ||||| ||||    |||||| ||| ||||||||||    
T  17981399 ttgggctccagtggcaaggagctccttccaaggatgtacccgggaaataccgggttcgattcccaggggg-aacaactcttgaccagtgtgcatgcctct 17981497  T
Q  241 acgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||  |||| ||||||| | ||| |||||||  ||||||||| ||||||||||    
T  17981498 acgcacgagtcgaattagttgcccagctttggtgagtcggaaaccggtgcgaaag 17981552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 136 - 295
Target Start/End: Original strand, 45521118 - 45521279
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttgggg-ggaaca-ttgaccggtgagca 233  Q
    |||| ||| ||||||| ||||||||||||| ||||| |||||| ||||| ||||||||  ||||||||||||  ||||   |||| |||| | ||| |||    
T  45521118 ccaagttgcttgggctccagtggcaaggagttcattccaaggatgtacccggggaataccgggttcgattcccaggggaacaacacttgatcagtgcgca 45521217  T
Q  234 tgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    ||||||||||||| || |  ||||||||  |||||||| | |||||||||| ||||||||||    
T  45521218 tgcctctacgcatgagccggattagtcgctcacctttgatgggtcggaaaccggtgcgaaag 45521279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 136 - 207
Target Start/End: Original strand, 6100421 - 6100492
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 207  Q
    |||| ||||||||||| |||||||||||||||| ||||||||||||| | ||||||||  ||||||||||||    
T  6100421 ccaagttgtttgggcttcagtggcaaggagctcctttcaaggacgtatccggggaataccgggttcgattcc 6100492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 136 - 295
Target Start/End: Complemental strand, 10535564 - 10535403
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgag 231  Q
    |||| |||||||| || |||||||||||||||| || |||||||||| | | ||||||   ||||| |||  ||  ||||||||    |||||| ||| |    
T  10535564 ccaagttgtttggactccagtggcaaggagctccttccaaggacgtatccgaggaatacatggttcaatt--ttcaggggaacaccgcttgaccagtgcg 10535467  T
Q  232 catgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||| ||| |||||| || | |||||||||| ||||||||||| ||||||||||||||||||||    
T  10535466 catgtctccacgcatgagccgaattagtcgttcacctttggtaagtcggaaactggtgcgaaag 10535403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 136 - 295
Target Start/End: Complemental strand, 14666232 - 14666070
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttgggg--ggaaca-ttgaccggtgagc 232  Q
    |||| ||| ||||||| ||||||||||||||||||| |||||||||| | ||||||||  ||||||||||||  ||||    |||| ||| || ||| ||    
T  14666232 ccaagttgcttgggctccagtggcaaggagctcattccaaggacgtatccggggaataccgggttcgattcccaggggaaacaacacttggccagtgcgc 14666133  T
Q  233 atgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||||||||  || || |||||||| ||||  ||||| ||||| |||| ||||||||||    
T  14666132 atgcctctacgcacaagccagattagtcgcccacagttggtgggtcgaaaaccggtgcgaaag 14666070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 141 - 294
Target Start/End: Complemental strand, 4479451 - 4479296
Alignment:
Q  141 ttgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgagcatgc 236  Q
    ||||||||| | |||||||||| || || |||||||||||||||||  |||||  || |||||||||  ||||  ||||    ||| || ||| ||||||    
T  4479451 ttgtttgggtttcagtggcaagaagttcctttcaaggacgtacctgtagaataccggattcgattcccagggg--aacaacgcttggccagtgcgcatgc 4479354  T
Q  237 ctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaa 294  Q
    |||||||||| ||    |||||||||||||||||||| |||||||||| |||||||||    
T  4479353 ctctacgcatgagctggattagtcgtccacctttggtgggtcggaaaccggtgcgaaa 4479296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 136 - 207
Target Start/End: Original strand, 34846763 - 34846833
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 207  Q
    |||| ||||||||||| ||||||||||||||||||| ||||||||||||  |||||||  ||||||||||||    
T  34846763 ccaagttgtttgggctccagtggcaaggagctcattccaaggacgtacc-cgggaataccgggttcgattcc 34846833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 136 - 207
Target Start/End: Complemental strand, 38922575 - 38922504
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 207  Q
    |||| ||| ||||||| |||||||||||||||| || |||||||||||| ||||||||  ||||||||||||    
T  38922575 ccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcc 38922504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 136 - 214
Target Start/End: Complemental strand, 44893439 - 44893361
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggg 214  Q
    |||| ||||||||||| |||||||||||||||| || |||||||||||| ||||||||  |||||| ||| || |||||    
T  44893439 ccaagttgtttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcaatttctaggggg 44893361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 136 - 295
Target Start/End: Complemental strand, 2467279 - 2467117
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgag 231  Q
    |||| ||| ||||||| |||||||||||||||| || |||||||||| | ||||||||  |||||||||| |   |||||||||    ||| || ||| |    
T  2467279 ccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgatttc-cagggggaacaactcttggccagtgcg 2467181  T
Q  232 catgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||| ||||| |||| || |  |||||||||||||  |||||  ||||||||| ||||||||||    
T  2467180 catgtctctatgcatgagccggattagtcgtccacaattggtgtgtcggaaaccggtgcgaaag 2467117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 136 - 295
Target Start/End: Original strand, 8141051 - 8141213
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgag 231  Q
    |||| ||||||||||| |||||||||||||||  || ||||||||||   ||||||||  |||||||||| |   |||| ||||    ||| || ||| |    
T  8141051 ccaagttgtttgggctccagtggcaaggagctgcttccaaggacgtattcggggaataccgggttcgatttc-caggggaaacaacgcttggccagtgcg 8141149  T
Q  232 catgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    ||||||||||||||| ||   |||||||||||||| |||||| |||| ||||| | ||||||||    
T  8141150 catgcctctacgcatgagctgaattagtcgtccacatttggtgggtcagaaaccgatgcgaaag 8141213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 136 - 206
Target Start/End: Original strand, 13085473 - 13085543
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattc 206  Q
    |||| ||||||||||| ||||||| |||||||| || |||||||||| | ||||||||  |||||||||||    
T  13085473 ccaacttgtttgggctccagtggcgaggagctccttccaaggacgtatccggggaataccgggttcgattc 13085543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 136 - 295
Target Start/End: Original strand, 24837191 - 24837353
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgag 231  Q
    |||| ||| ||||||| |||||||||||||||| || |||| ||||||| ||||||||  | ||||||||||  ||| | ||||    ||| || |||      
T  24837191 ccaagttgcttgggctccagtggcaaggagctccttccaagtacgtacccggggaataccgtgttcgattcccagggag-aacaacgcttggccagtgtt 24837289  T
Q  232 catgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||||| |||  ||    |||||||||||||||||||| | |||||||||||||||||||    
T  24837290 catgcctctaagcacgagcaggattagtcgtccacctttggtggatcggaaactggtgcgaaag 24837353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 136 - 205
Target Start/End: Complemental strand, 9395979 - 9395910
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgatt 205  Q
    |||| ||| |||| || ||||||||| |||||||||||||||| ||| ||||||||||| || |||||||    
T  9395979 ccaagttgcttggactccagtggcaatgagctcatttcaaggatgtatctggggaatatcggattcgatt 9395910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 136 - 213
Target Start/End: Original strand, 22810029 - 22810106
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttgggg 213  Q
    |||| |||||||||||  ||||||||||||||| || |||||||||| | || ||| || |||||||||||| |||||    
T  22810029 ccaagttgtttgggctctagtggcaaggagctccttccaaggacgtatccggagaacatcgggttcgattccctgggg 22810106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 236 - 284
Target Start/End: Original strand, 3567956 - 3568004
Alignment:
Q  236 cctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaac 284  Q
    ||||||||||| || |||||||||| |||||||||||| ||||||||||    
T  3567956 cctctacgcatgagccaaattagtcatccacctttggtgggtcggaaac 3568004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 231 - 295
Target Start/End: Complemental strand, 11298330 - 11298266
Alignment:
Q  231 gcatgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    ||||||||||| |||| || ||||||| |||  |||||||||| |||||||||| ||||||||||    
T  11298330 gcatgcctctatgcatgagccaaattaatcgctcacctttggtgggtcggaaaccggtgcgaaag 11298266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 207
Target Start/End: Complemental strand, 1013138 - 1013067
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 207  Q
    |||| ||| ||||||| |||||||||||||||  || |||||||||| | ||||||||  ||||||||||||    
T  1013138 ccaagttgcttgggctccagtggcaaggagctttttccaaggacgtatccggggaataccgggttcgattcc 1013067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 220 - 295
Target Start/End: Original strand, 18374046 - 18374121
Alignment:
Q  220 ttgaccggtgagcatgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||| ||| |||||||||||||||| || |  |||||||||||| ||||||| ||||| |||| ||||| ||||    
T  18374046 ttgaccagtgcgcatgcctctacgcatgagccggattagtcgtccaactttggtgggtcgaaaaccggtgcaaaag 18374121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 207
Target Start/End: Complemental strand, 34613939 - 34613868
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 207  Q
    |||||||||||||||| ||||||||| |||||| || |||   |||| | ||||||||| ||||||||||||    
T  34613939 ccaaattgtttgggctccagtggcaatgagctccttccaaaaccgtatccggggaatatcgggttcgattcc 34613868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 148 - 194
Target Start/End: Complemental strand, 7673803 - 7673757
Alignment:
Q  148 ggctgcagtggcaaggagctcatttcaaggacgtacctggggaatat 194  Q
    |||| |||||||||||||||| || |||||||||| |||||||||||    
T  7673803 ggctccagtggcaaggagctccttccaaggacgtatctggggaatat 7673757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 291
Target Start/End: Complemental strand, 4772091 - 4772054
Alignment:
Q  254 attagtcgtccacctttggtaggtcggaaactggtgcg 291  Q
    |||||||||||||||||||| |||||||||| ||||||    
T  4772091 attagtcgtccacctttggtgggtcggaaaccggtgcg 4772054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 205
Target Start/End: Original strand, 6940507 - 6940576
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgatt 205  Q
    |||| ||||||||||| |||||| |||||||||||| |||||| ||| | ||  ||||| ||||||||||    
T  6940507 ccaagttgtttgggctccagtggtaaggagctcattccaaggaggtatccggaaaatatcgggttcgatt 6940576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 207
Target Start/End: Original strand, 11785887 - 11785936
Alignment:
Q  158 gcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 207  Q
    |||||||||||||| |||||||||||| ||||||||  || |||||||||    
T  11785887 gcaaggagctcattccaaggacgtacccggggaataccggattcgattcc 11785936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 182
Target Start/End: Complemental strand, 35496406 - 35496369
Alignment:
Q  145 ttgggctgcagtggcaaggagctcatttcaaggacgta 182  Q
    ||||||| | ||||||||||||||||||||||||||||    
T  35496406 ttgggctccggtggcaaggagctcatttcaaggacgta 35496369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 254 - 298
Target Start/End: Original strand, 2209853 - 2209897
Alignment:
Q  254 attagtcgtccacctttggtaggtcggaaactggtgcgaaagaaa 298  Q
    ||||||||  |||| |||||||||| |||||||||||||||||||    
T  2209853 attagtcgctcaccattggtaggtcagaaactggtgcgaaagaaa 2209897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 231 - 295
Target Start/End: Original strand, 3692880 - 3692944
Alignment:
Q  231 gcatgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||| ||||||||||| || | ||||| |||| |||||||||||||||| |||| ||| ||||||    
T  3692880 gcatacctctacgcatgagccgaattaatcgttcacctttggtaggtcgaaaaccggtacgaaag 3692944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 18091350 - 18091394
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacg 180  Q
    |||| ||||||||||| ||||||||||||||| ||| ||||||||    
T  18091350 ccaagttgtttgggctccagtggcaaggagcttattccaaggacg 18091394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 254 - 298
Target Start/End: Original strand, 23895638 - 23895682
Alignment:
Q  254 attagtcgtccacctttggtaggtcggaaactggtgcgaaagaaa 298  Q
    |||| ||||||||||||| | |||||||||| |||||||||||||    
T  23895638 attaatcgtccacctttgatgggtcggaaacgggtgcgaaagaaa 23895682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 1e-20; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 136 - 295
Target Start/End: Original strand, 48804631 - 48804793
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttgggggga--aca-ttgaccggtgagc 232  Q
    |||| ||| ||||||| |||||||||||||||| || |||||||||| | ||||||||  ||||||||||||   |||| |  ||| ||| || ||| ||    
T  48804631 ccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccaaggggaacaacacttggccagtgcgc 48804730  T
Q  233 atgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||||||||| || |  |||||||||||||| ||||| |||||||||| ||||||||||    
T  48804731 atgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 48804793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 173 - 298
Target Start/End: Complemental strand, 38578991 - 38578863
Alignment:
Q  173 caaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgagcatgcctctacgcattagtcaaattagtcgtccacct 268  Q
    |||||||||||| ||||||||| ||||||||||||  ||||| ||||    ||| || ||| |||||||||||||||| || |  |||||||| ||||||    
T  38578991 caaggacgtacccggggaatatcgggttcgattcccaggggg-aacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgcccacct 38578893  T
Q  269 ttggtaggtcggaaactggtgcgaaagaaa 298  Q
    ||||| |||||||||| |||||||||||||    
T  38578892 ttggtgggtcggaaaccggtgcgaaagaaa 38578863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 136 - 295
Target Start/End: Original strand, 13095806 - 13095968
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggg--gaaca-ttgaccggtgagc 232  Q
    |||| ||| ||||||| | |||||||||||||| ||||||||||||||| ||||||||  |||||| |||||  |||||   |||| ||| || ||| ||    
T  13095806 ccaagttgcttgggctcccgtggcaaggagctcctttcaaggacgtacccggggaataccgggttctattcccagggggaacaacacttggccagtgcgc 13095905  T
Q  233 atgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||||||||| || |  ||||||||  |||||||||| |||||||||| ||||| ||||    
T  13095906 atgcctctacgcatgagccggattagtcgctcacctttggtgggtcggaaaccggtgcaaaag 13095968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 136 - 207
Target Start/End: Complemental strand, 22268190 - 22268119
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 207  Q
    |||| ||||||||||| ||||||||||||||||||| ||||||||||| |||||||||  ||||||||||||    
T  22268190 ccaagttgtttgggctccagtggcaaggagctcattccaaggacgtacttggggaataccgggttcgattcc 22268119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 136 - 295
Target Start/End: Complemental strand, 8734847 - 8734685
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgag 231  Q
    |||| ||||||||||  |||||||||||||||| || ||||||| || || ||||||||  ||||||||| ||| |||||||||    |||  | ||| |    
T  8734847 ccaagttgtttgggcgtcagtggcaaggagctccttccaaggacatatctcgggaatatcaggttcgatttctt-gggggaacaatgcttgggcagtgcg 8734749  T
Q  232 catgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||| |||||  || || |||||||| ||||||||||| |||||||||| ||||||||||    
T  8734748 catgcctcaacgcacgagccagattagtcgcccacctttggtgggtcggaaaccggtgcgaaag 8734685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 153 - 295
Target Start/End: Complemental strand, 10048020 - 10047875
Alignment:
Q  153 cagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttgggggga--aca-ttgaccggtgagcatgcctctacgcattag 249  Q
    |||||||||||||||| || |||||||||| | ||||||||  ||||||||||||  ||||| |  ||| ||| || ||| ||| |||||||||||| ||    
T  10048020 cagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcaggcctctacgcatgag 10047921  T
Q  250 tcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
       ||||||||||||||| ||||| |||||||||| ||||||||||    
T  10047920 cagaattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 10047875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 136 - 302
Target Start/End: Complemental strand, 27875248 - 27875080
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttgggggga--aca-ttgaccggtgagc 232  Q
    |||| ||||||||||| |||||||||| ||||| || |||| ||||| ||||||||||  || |||||||||  ||||| |  ||| ||| || |||  |    
T  27875248 ccaagttgtttgggctccagtggcaagtagctccttccaag-acgtatctggggaataccggattcgattcccagggggaataacacttggccagtgcac 27875150  T
Q  233 atgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaagaaagaaa 302  Q
    |||||||||||||| ||||  ||||||||||||||||| || ||||| |||| ||||||||| |||||||    
T  27875149 atgcctctacgcatgagtcgcattagtcgtccacctttagtgggtcgaaaaccggtgcgaaaaaaagaaa 27875080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 146 - 293
Target Start/End: Original strand, 18785627 - 18785777
Alignment:
Q  146 tgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggg--gaaca-ttgaccggtgagcatgcctctac 242  Q
    |||||| |||||||||| ||||| || |||||||||||| ||||||||  ||||||||||||| |||||   |||| ||| || ||| ||||||||||||    
T  18785627 tgggctccagtggcaagaagctccttccaaggacgtacccggggaataccgggttcgattcctagggggaacaacacttggccagtgcgcatgcctctac 18785726  T
Q  243 gcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaa 293  Q
    |||| |     ||||||||| ||||| |||| |||||||||| ||||||||    
T  18785727 gcatgaactggattagtcgttcacctctggtgggtcggaaaccggtgcgaa 18785777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 136 - 295
Target Start/End: Original strand, 22973915 - 22974077
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgag 231  Q
    |||| |||||||||||  | |||| |||||||| || |||||||||||  ||||||||  ||||||||||| |  |||||||||    ||| || ||| |    
T  22973915 ccaagttgtttgggctctaatggcgaggagctccttccaaggacgtactcggggaataccgggttcgattc-tcagggggaacaacgcttggccagtgtg 22974013  T
Q  232 catgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    ||||| ||||||||| || || |||||||||||||||||||| |||| ||||| || |||||||    
T  22974014 catgcgtctacgcatgagccagattagtcgtccacctttggtgggtcagaaaccggcgcgaaag 22974077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 136 - 295
Target Start/End: Original strand, 3353373 - 3353534
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgag 231  Q
    |||||||| |||| ||||||||||||||||||||||  ||||||||| || |||||||| ||| |||||||  |  ||| ||||    ||| || ||| |    
T  3353373 ccaaattgcttggcctgcagtggcaaggagctcattataaggacgtatctagggaatatcgggatcgattc--tcagggaaacaacatttggccagtgcg 3353470  T
Q  232 catgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    ||||||||||||||  || |  |||||||||||||||||| | | || ||||| ||||||||||    
T  3353471 catgcctctacgcacgagccggattagtcgtccacctttgatggatcagaaaccggtgcgaaag 3353534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 136 - 207
Target Start/End: Complemental strand, 19914863 - 19914792
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 207  Q
    |||| ||| ||||||| |||||||||||||||| || |||||||||||||  |||||| |||||||||||||    
T  19914863 ccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacctaaggaatactgggttcgattcc 19914792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 148 - 207
Target Start/End: Original strand, 21530708 - 21530767
Alignment:
Q  148 ggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 207  Q
    |||| |||||||||||||||| || ||||||||||||||||||||| |||||| ||||||    
T  21530708 ggctccagtggcaaggagctccttccaaggacgtacctggggaatactgggtttgattcc 21530767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 136 - 207
Target Start/End: Complemental strand, 22993528 - 22993457
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 207  Q
    |||| ||| |||| || |||||||||||||||| || |||||||||||| ||||||||| ||||||||||||    
T  22993528 ccaagttgcttggactccagtggcaaggagctccttccaaggacgtacccggggaatatcgggttcgattcc 22993457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 136 - 207
Target Start/End: Original strand, 43925460 - 43925531
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 207  Q
    |||| ||| ||||||| |||||||||||||||| || |||||||||||| ||||||||  ||||||||||||    
T  43925460 ccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcc 43925531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 136 - 207
Target Start/End: Original strand, 47341824 - 47341895
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 207  Q
    |||| ||| ||||||| ||||||||||||||||||| |||||||||||| ||||||||  | ||||||||||    
T  47341824 ccaagttgcttgggctccagtggcaaggagctcattccaaggacgtacccggggaataccgagttcgattcc 47341895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 136 - 295
Target Start/End: Original strand, 34659174 - 34659336
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgag 231  Q
    |||| ||||||||||| |||||||||||||||| || || ||| ||||| ||||||||  |||||||||| ||   ||||||||    |||||| ||| |    
T  34659174 ccaagttgtttgggctccagtggcaaggagctccttccagggatgtacccggggaataccgggttcgatt-ctcaaggggaacaacgcttgaccagtgcg 34659272  T
Q  232 catgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    ||||||||||||||  || |  |||||||| ||||| |||||  |||| |||| ||||||||||    
T  34659273 catgcctctacgcacgagccggattagtcgcccaccattggtgtgtcgaaaaccggtgcgaaag 34659336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 136 - 295
Target Start/End: Complemental strand, 43862133 - 43861971
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgag 231  Q
    |||| |||||||||||  || |||||||||||| || ||| |||||| ||||||||||  ||||||||||||   |||||||||    ||| || ||| |    
T  43862133 ccaagttgtttgggctctagcggcaaggagctctttccaaagacgtatctggggaataccgggttcgattcc-cagggggaacaacgtttggccagtgcg 43862035  T
Q  232 catgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    ||||||||||||||| || |  ||||||| | |||||||||| | ||| |||| ||||||||||    
T  43862034 catgcctctacgcatgagccggattagtcattcacctttggtggatcgaaaaccggtgcgaaag 43861971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 141 - 206
Target Start/End: Original strand, 9685692 - 9685757
Alignment:
Q  141 ttgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattc 206  Q
    ||||||||||| |||||||||||||||| || |||| ||||| | ||||||||| |||||||||||    
T  9685692 ttgtttgggctccagtggcaaggagctccttccaagcacgtatccggggaatatcgggttcgattc 9685757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 136 - 297
Target Start/End: Original strand, 27028227 - 27028391
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggg--gaaca-ttgaccggtgagc 232  Q
    |||| |||||||| || | ||||||||||||||||| |||| ||||||||||| ||||   ||||||||| |  |||||   |||| ||| || ||| ||    
T  27028227 ccaagttgtttggactccggtggcaaggagctcattccaagaacgtacctgggaaataccaggttcgatttccagggggaacaacacttggccagtgcgc 27028326  T
Q  233 atgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaagaa 297  Q
    |||||||||| ||| ||    ||||||||  |||||||||| |||||||||| ||||||||||||    
T  27028327 atgcctctacacatgagctggattagtcgctcacctttggtgggtcggaaaccggtgcgaaagaa 27028391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 254 - 295
Target Start/End: Original strand, 28744231 - 28744272
Alignment:
Q  254 attagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  28744231 attagtcgtccacctttggtgggtcggaaactggtgcgaaag 28744272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 136 - 205
Target Start/End: Original strand, 14650265 - 14650334
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgatt 205  Q
    |||| |||||||| ||  ||||||||||||||| || |||||||||||| || |||||| ||||||||||    
T  14650265 ccaagttgtttggactctagtggcaaggagctccttccaaggacgtacccggagaatatcgggttcgatt 14650334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 231 - 284
Target Start/End: Complemental strand, 41267987 - 41267934
Alignment:
Q  231 gcatgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaac 284  Q
    |||||||||||||||| ||| | |||||||||||||||||| | ||||||||||    
T  41267987 gcatgcctctacgcatgagttagattagtcgtccacctttgatgggtcggaaac 41267934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 24969480 - 24969416
Alignment:
Q  141 ttgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgatt 205  Q
    ||||||||||| |||||||||||||||  ||||||||||||| ||||  ||||  ||||||||||    
T  24969480 ttgtttgggctccagtggcaaggagcttttttcaaggacgtatctggaaaataccgggttcgatt 24969416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 207
Target Start/End: Complemental strand, 34127781 - 34127710
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 207  Q
    |||| ||| ||||||| || ||||||||| ||| || |||||||||||| ||||||||  ||||||||||||    
T  34127781 ccaagttgcttgggctccaatggcaaggaactccttccaaggacgtacccggggaataccgggttcgattcc 34127710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 145 - 207
Target Start/End: Original strand, 1797417 - 1797479
Alignment:
Q  145 ttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 207  Q
    ||||||| |||||||||||||||| || |||||||||| | | ||||||  ||||||||||||    
T  1797417 ttgggctccagtggcaaggagctccttccaaggacgtatccgaggaataccgggttcgattcc 1797479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 141 - 207
Target Start/End: Original strand, 42032049 - 42032115
Alignment:
Q  141 ttgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 207  Q
    ||||||||||| |||| ||||| ||||| || |||||||||||| ||||||||   |||||||||||    
T  42032049 ttgtttgggctccagtagcaagaagctccttccaaggacgtacccggggaatacctggttcgattcc 42032115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 136 - 206
Target Start/End: Complemental strand, 43346940 - 43346870
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattc 206  Q
    |||| |||||||| || |||||||||||||||| || ||| |||||| ||||||||||  |||||| ||||    
T  43346940 ccaagttgtttggactccagtggcaaggagctccttccaaagacgtatctggggaataccgggttcaattc 43346870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 23658133 - 23658185
Alignment:
Q  141 ttgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatat 194  Q
    ||||||||||| ||||||||||||||||  ||||||||||||||  ||||||||    
T  23658133 ttgtttgggctccagtggcaaggagctc-cttcaaggacgtacccagggaatat 23658185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 294
Target Start/End: Complemental strand, 26423448 - 26423288
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgag 231  Q
    |||| ||||||||||| |||||||||| | ||| || ||||||||||||   ||||||  ||||||||||||  ||||  ||||    ||| || |||      
T  26423448 ccaagttgtttgggctccagtggcaagaaactccttccaaggacgtacccaaggaataccgggttcgattcccagggga-aacaacgcttggccagtgca 26423350  T
Q  232 catgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaa 294  Q
    | ||||||||||||  || || ||||||||| |||||||||| |||||||||| |||||||||    
T  26423349 cctgcctctacgcacgagccagattagtcgttcacctttggt-ggtcggaaaccggtgcgaaa 26423288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 193
Target Start/End: Original strand, 39420786 - 39420843
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaata 193  Q
    |||| ||| |||||||  ||||||||||||||| ||||||||| ||||| ||||||||    
T  39420786 ccaagttgcttgggctctagtggcaaggagctcctttcaaggaggtacccggggaata 39420843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 284
Target Start/End: Complemental strand, 45697253 - 45697200
Alignment:
Q  231 gcatgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaac 284  Q
    |||||||||||||||| |||    ||||||||||||||||||| ||||||||||    
T  45697253 gcatgcctctacgcatgagttgggttagtcgtccacctttggtgggtcggaaac 45697200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 231 - 295
Target Start/End: Complemental strand, 5069878 - 5069814
Alignment:
Q  231 gcatgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||||||||||  || |  |||||||| ||||||||||| |||||||||| | ||||||||    
T  5069878 gcatgcctctacgcacaagccggattagtcgcccacctttggtgggtcggaaaccgatgcgaaag 5069814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 5069971 - 5069907
Alignment:
Q  141 ttgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgatt 205  Q
    ||||||||||| |||||||||||||||  ||  ||||||||||| ||| ||||  ||||||||||    
T  5069971 ttgtttgggctccagtggcaaggagcttcttctaaggacgtacccgggaaataccgggttcgatt 5069907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 146 - 206
Target Start/End: Original strand, 16802081 - 16802141
Alignment:
Q  146 tgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattc 206  Q
    |||||| ||||||||| |||||| || |||||||||||| ||||||||  || ||||||||    
T  16802081 tgggctccagtggcaatgagctccttccaaggacgtacccggggaataccggattcgattc 16802141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 231 - 295
Target Start/End: Original strand, 41945519 - 41945583
Alignment:
Q  231 gcatgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||||||||||  || |  ||||||||||||||||||||  ||||||||  ||||||||||    
T  41945519 gcatgcctctacgcacgagccggattagtcgtccacctttggtgagtcggaaatcggtgcgaaag 41945583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 141 - 193
Target Start/End: Original strand, 46414628 - 46414680
Alignment:
Q  141 ttgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaata 193  Q
    ||||||||||| | |||||||||||||| ||| ||||||||||| | ||||||    
T  46414628 ttgtttgggctcccgtggcaaggagctccttttaaggacgtacccgtggaata 46414680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 231 - 295
Target Start/End: Original strand, 48551903 - 48551967
Alignment:
Q  231 gcatgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    ||||||||||||| || || |  |||||||||||||||||| | | |||||||| ||||||||||    
T  48551903 gcatgcctctacgtatgagccggattagtcgtccacctttgatggatcggaaaccggtgcgaaag 48551967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 1e-20; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 136 - 295
Target Start/End: Complemental strand, 5253384 - 5253222
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggg--gaaca-ttgaccggtgagc 232  Q
    |||| ||| ||||||| || ||||||||||||| || |||||||||||| ||||||||  ||||||||||||  |||||   |||| ||| || ||| ||    
T  5253384 ccaagttgcttgggctccaatggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgc 5253285  T
Q  233 atgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||||||||| || |  |||| ||| ||||||||||| |||||||||| ||||||||||    
T  5253284 atgcctctacgcatgagccggattaatcgcccacctttggtgggtcggaaaccggtgcgaaag 5253222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 141 - 207
Target Start/End: Original strand, 9147255 - 9147321
Alignment:
Q  141 ttgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 207  Q
    ||||||||||| |||||| |||||||||||| |||||||||||||||||||||| ||||||||||||    
T  9147255 ttgtttgggctccagtgggaaggagctcattccaaggacgtacctggggaatatcgggttcgattcc 9147321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 136 - 298
Target Start/End: Complemental strand, 9179897 - 9179732
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggg--gaaca-ttgaccggtgagc 232  Q
    |||| ||||||||||| ||||||||||||||||||| ||||||||||||  |||||||  ||||||||||||  |||||   |||| |||||| ||  ||    
T  9179897 ccaagttgtttgggctccagtggcaaggagctcattccaaggacgtacccagggaataccgggttcgattcccagggggaacaacacttgaccagtatgc 9179798  T
Q  233 atgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaagaaa 298  Q
    || ||||||||||| ||    |||||||||||||||||||| | |||||||  ||| |||||||||    
T  9179797 atacctctacgcatgagctggattagtcgtccacctttggtggatcggaaatcggtccgaaagaaa 9179732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 136 - 298
Target Start/End: Complemental strand, 29333299 - 29333135
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgag 231  Q
    |||| |||||||||||  |||||||| |||||| || ||||||||||||  |||||||  |||||||||| |  ||||  ||||    ||| || ||| |    
T  29333299 ccaagttgtttgggctctagtggcaatgagctccttccaaggacgtacccagggaataccgggttcgatttccagggg--aacaacgtttggccagtgcg 29333202  T
Q  232 catgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaagaaa 298  Q
    ||||||||||||||| || | ||| |||||||||||||||||||||||| ||| |||||||||||||    
T  29333201 catgcctctacgcatgagccgaatcagtcgtccacctttggtaggtcggtaaccggtgcgaaagaaa 29333135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 145 - 295
Target Start/End: Complemental strand, 13036156 - 13036003
Alignment:
Q  145 ttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgagcatgcctct 240  Q
    ||||||| |||||||||||||||| || ||||||||||   ||||||||| ||||||||||  |  |||||||||    ||| || ||| ||||||||||    
T  13036156 ttgggctccagtggcaaggagctccttccaaggacgtattcggggaatatcgggttcgattt-tcagggggaacaacacttggccagtgcgcatgcctct 13036058  T
Q  241 acgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||| || || |||||||||||||  ||||| |||||||||| ||||||||||    
T  13036057 acgcatgagccagattagtcgtccactattggtgggtcggaaaccggtgcgaaag 13036003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 136 - 295
Target Start/End: Original strand, 19089447 - 19089609
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttgggggga--aca-ttgaccggtgagc 232  Q
    |||| ||| ||||||| |||| ||||||||||||||||||||||||| | | ||||||   |||| ||||||  ||||| |  ||| ||| || ||||||    
T  19089447 ccaagttgcttgggctccagtcgcaaggagctcatttcaaggacgtatccgaggaataccaggtttgattcccagggggaacaacacttggccagtgagc 19089546  T
Q  233 atgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||||||||  || |  |||||||||| ||||||||| |||||||||| ||||||||||    
T  19089547 atgcctctacgcacgagccggattagtcgtctacctttggtgggtcggaaaccggtgcgaaag 19089609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 136 - 295
Target Start/End: Complemental strand, 6606258 - 6606096
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgag 231  Q
    |||| ||| ||||||  |||||||||||||||| || |||||||||| | ||||||||  ||||||||||| |  |||||||||    ||| || |||      
T  6606258 ccaagttgcttgggccacagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattc-tcagggggaacaacacttggccagtgta 6606160  T
Q  232 catgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    ||||||||||||||| || |  |||||||||||||| ||||| |||||||||| ||||||||||    
T  6606159 catgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 6606096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 136 - 295
Target Start/End: Complemental strand, 8612135 - 8611973
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgag 231  Q
    |||| |||||||| || |||||||||||||||| || |||||||||||| ||||||||  ||||||||||||   || ||||||    |||||| ||| |    
T  8612135 ccaagttgtttggactccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcc-gaggaggaacaacgcttgaccagtgtg 8612037  T
Q  232 catgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    ||||| ||||||||| |  |  |||||||| ||||||||||| |||| ||||| ||||||||||    
T  8612036 catgcttctacgcatgaaccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaag 8611973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 136 - 298
Target Start/End: Original strand, 8938660 - 8938825
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttgggggga--aca-ttgaccggtgagc 232  Q
    |||| ||||||||||| ||||| |||||||||| || ||| ||| || | |||||||| | |||||||||||  || || |  ||| |||||| ||| ||    
T  8938660 ccaagttgtttgggctccagtgacaaggagctccttccaaagacatatccggggaatacttggttcgattcccaggaggaacaacacttgaccagtgcgc 8938759  T
Q  233 atgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaagaaa 298  Q
    | || ||||||||| || | ||||||||||||||||||| | |||||||||| |||||||||||||    
T  8938760 aagcatctacgcatgagccgaattagtcgtccacctttgatgggtcggaaaccggtgcgaaagaaa 8938825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 136 - 295
Target Start/End: Original strand, 21898597 - 21898759
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgag 231  Q
    |||| ||| ||||||| |||||||||||||||| || |||||||||| | ||||||||  ||||||||||||   || ||||||    ||| || ||| |    
T  21898597 ccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcc-caggaggaacaacgcttggccagtgcg 21898695  T
Q  232 catgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    ||||||||||||||| || |  ||||||||| ||||||| || |||||||||| ||||||||||    
T  21898696 catgcctctacgcatgagccggattagtcgttcacctttagtgggtcggaaaccggtgcgaaag 21898759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 136 - 207
Target Start/End: Complemental strand, 3030779 - 3030708
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 207  Q
    |||| ||||||||||| ||||||||||||||||||| ||||||||||  | |||||||| ||||||||||||    
T  3030779 ccaagttgtttgggctccagtggcaaggagctcattccaaggacgtatttcgggaatatcgggttcgattcc 3030708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 232 - 294
Target Start/End: Complemental strand, 8149859 - 8149797
Alignment:
Q  232 catgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaa 294  Q
    |||||||||||||||||| | ||||||||||||||||||||| ||| |||||| |||||||||    
T  8149859 catgcctctacgcattagccgaattagtcgtccacctttggtgggttggaaaccggtgcgaaa 8149797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 141 - 284
Target Start/End: Complemental strand, 34954774 - 34954629
Alignment:
Q  141 ttgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgagcatgc 236  Q
    ||||||||||| || ||||||||||||| || |||||||||||||||||||||   ||||||||| ||  |||||||||    ||| || |||  ||| |    
T  34954774 ttgtttgggctcca-tggcaaggagctccttccaaggacgtacctggggaataccaggttcgatt-ctcagggggaacaacgtttggccagtgcacatac 34954677  T
Q  237 ctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaac 284  Q
    |||||||||| || || |||||||||||||||||| | ||||||||||    
T  34954676 ctctacgcatgagccagattagtcgtccacctttgatgggtcggaaac 34954629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 145 - 295
Target Start/End: Complemental strand, 29444917 - 29444764
Alignment:
Q  145 ttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgagcatgcctct 240  Q
    |||||||  ||||||||||||||| || ||| |||||||| |||| |||  |||||||||| || ||||| ||||    ||| || ||| ||||||||||    
T  29444917 ttgggctctagtggcaaggagctccttccaaagacgtacccgggggataccgggttcgatttctaggggg-aacaacgcttggccagtgcgcatgcctct 29444819  T
Q  241 acgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||| || |  |||||| ||||| ||||||| ||||||||||| |||||||||    
T  29444818 acgcatgagccggattagttgtccatctttggtgggtcggaaactagtgcgaaag 29444764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 220 - 294
Target Start/End: Original strand, 11142639 - 11142713
Alignment:
Q  220 ttgaccggtgagcatgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaa 294  Q
    |||||| ||| |||||||||||||||| ||||| |||||| ||||| ||||||| ||||||| || |||||||||    
T  11142639 ttgaccagtgcgcatgcctctacgcatgagtcagattagttgtccaactttggtgggtcggagaccggtgcgaaa 11142713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 231 - 295
Target Start/End: Complemental strand, 14783483 - 14783419
Alignment:
Q  231 gcatgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||||||||||| || |  |||||||||||||| ||||| |||||||||| ||||||||||    
T  14783483 gcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 14783419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 136 - 208
Target Start/End: Complemental strand, 17115058 - 17114986
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcct 208  Q
    |||||||| ||||||| |||||||||| ||||| || ||||||||||| ||| ||||||||  ||||||||||    
T  17115058 ccaaattgcttgggctccagtggcaagaagctccttccaaggacgtacatggagaatattgaattcgattcct 17114986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 136 - 208
Target Start/End: Complemental strand, 21016912 - 21016840
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcct 208  Q
    |||| ||| ||||||| |||||||||||||||| || || ||||||||| ||||||||  |||||||||||||    
T  21016912 ccaagttgcttgggctccagtggcaaggagctccttccagggacgtacccggggaataccgggttcgattcct 21016840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 136 - 207
Target Start/End: Complemental strand, 24672027 - 24671956
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 207  Q
    |||| ||| ||||||| |||||||||||||||| ||||||||||||| |||| |||||  |||||| |||||    
T  24672027 ccaagttgcttgggctccagtggcaaggagctcctttcaaggacgtatctggagaataccgggttctattcc 24671956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 136 - 206
Target Start/End: Complemental strand, 15643989 - 15643920
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattc 206  Q
    |||| ||| ||||||| ||||||||||||||||||| |||||||||| || |||||||  |||||||||||    
T  15643989 ccaagttgcttgggctccagtggcaaggagctcattccaaggacgtatct-gggaataacgggttcgattc 15643920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 254 - 295
Target Start/End: Original strand, 3601154 - 3601195
Alignment:
Q  254 attagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||||||||||||||| |||||||||| ||||||||||    
T  3601154 attagtcgtccacctttggtgggtcggaaaccggtgcgaaag 3601195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 231 - 295
Target Start/End: Original strand, 5029864 - 5029928
Alignment:
Q  231 gcatgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||||||||||| |||   |||||||| ||| ||||| | |||||||||||||||||||||    
T  5029864 gcatgcctctacgcatgagttggattagtcgcccatctttgatgggtcggaaactggtgcgaaag 5029928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 231 - 295
Target Start/End: Complemental strand, 9633688 - 9633624
Alignment:
Q  231 gcatgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||||||||||  || |  |||||||| ||||||||||| |||||||||| ||||||||||    
T  9633688 gcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaag 9633624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 231 - 295
Target Start/End: Original strand, 31129224 - 31129288
Alignment:
Q  231 gcatgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||||||||||| || || |||||| || ||||||||||  ||||||||| ||||||||||    
T  31129224 gcatgcctctacgcatgagccagattagttgtgcacctttggtgagtcggaaaccggtgcgaaag 31129288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 207
Target Start/End: Original strand, 5759577 - 5759648
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 207  Q
    |||| ||| ||||||| |||||||||||| ||| || |||||||||||| | ||||||| ||||| ||||||    
T  5759577 ccaagttgcttgggctccagtggcaaggaactccttccaaggacgtacccgaggaatatcgggtttgattcc 5759648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 207
Target Start/End: Complemental strand, 6600784 - 6600714
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 207  Q
    |||| |||||||| || ||||||||| ||||||||||||| |||||||| || ||||| | |||||||||||    
T  6600784 ccaagttgtttggacttcagtggcaaagagctcatttcaatgacgtacccggagaatact-ggttcgattcc 6600714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 207
Target Start/End: Complemental strand, 14107519 - 14107448
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 207  Q
    |||| ||||||||||| |||||||||||||||| || ||| ||||||   ||||||||  ||||||||||||    
T  14107519 ccaagttgtttgggctccagtggcaaggagctccttccaaagacgtattcggggaataccgggttcgattcc 14107448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 19230718 - 19230671
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtac 183  Q
    |||| ||||||||||| |||||||||||||||| || |||||||||||    
T  19230718 ccaagttgtttgggctccagtggcaaggagctccttccaaggacgtac 19230671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 136 - 206
Target Start/End: Complemental strand, 2271462 - 2271392
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattc 206  Q
    |||| ||| ||||||| |||||||||||||||| || ||||||||||   ||||||||  |||||||||||    
T  2271462 ccaagttgcttgggctccagtggcaaggagctccttccaaggacgtattcggggaataccgggttcgattc 2271392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 295
Target Start/End: Complemental strand, 30788893 - 30788852
Alignment:
Q  254 attagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||| ||||||||||| |||||||||| ||||||||||    
T  30788893 attagtcgcccacctttggtgggtcggaaaccggtgcgaaag 30788852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 145 - 205
Target Start/End: Complemental strand, 26476515 - 26476455
Alignment:
Q  145 ttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgatt 205  Q
    ||||||| |||| || |||||||| || ||||||||||||||| |||||| |||| |||||    
T  26476515 ttgggcttcagttgcgaggagctccttccaaggacgtacctggagaatatcgggtacgatt 26476455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 48; Significance: 3e-18; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 136 - 295
Target Start/End: Original strand, 518 - 680
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggg--gaaca-ttgaccggtgagc 232  Q
    |||| ||| |||||||  ||||||||||||||| || |||||||||||| ||||||||  |||||||||||   |||||   |||| |||| | ||| ||    
T  518 ccaagttgcttgggctctagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcgcagggggaacaacacttgatcagtgtgc 617  T
Q  233 atgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    ||||||||||| || || || ||||||||  |||||||||| |||||||||| ||||||||||    
T  618 atgcctctacgtatgagccagattagtcgctcacctttggtgggtcggaaaccggtgcgaaag 680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 148 - 295
Target Start/End: Original strand, 319382 - 319532
Alignment:
Q  148 ggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgagcatgcctctacg 243  Q
    |||| |||||||||||||||| || |||||||||| | ||||||||  ||||| |||| || ||||| ||||    ||| || ||| |||| |||||| |    
T  319382 ggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggtttgatttctaggggg-aacaacgcttggccagtgcgcatccctctatg 319480  T
Q  244 cattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    ||| ||    |||||||||||||||||||| || ||||||| ||||||||||    
T  319481 catgagctggattagtcgtccacctttggtggggcggaaaccggtgcgaaag 319532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 207
Target Start/End: Original strand, 139397 - 139454
Alignment:
Q  154 agtggcaaggagctcatttcaaggacgtac----ctggggaatattgggttcgattcc 207  Q
    ||||||||||||||| || |||||||||||    ||||||||||| ||||||||||||    
T  139397 agtggcaaggagctccttccaaggacgtacgtatctggggaatatcgggttcgattcc 139454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 154 - 284
Target Start/End: Original strand, 5939 - 6071
Alignment:
Q  154 agtggcaaggagctcatttcaaggacgtacctggggaatattgggttcga-ttccttggggggaac-attgaccggtgagcatgcctctacgcattagtc 251  Q
    ||||||||||||||| |||||||| |||||| |||||||| ||||||||| ||||  ||||  |||  ||| || |||  ||||||||||||||| || |    
T  5939 agtggcaaggagctcctttcaagggcgtacccggggaatactgggttcgatttccagggggacaacgcttggccagtgcacatgcctctacgcatgagac 6038  T
Q  252 aaattagtcgtccacctttggtaggtcggaaac 284  Q
     ||||||||||||||| ||||| ||||||||||    
T  6039 gaattagtcgtccaccattggtgggtcggaaac 6071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 1757 - 1613
Alignment:
Q  154 agtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttgggggga--ac-attgaccggtgagcatgcctctacgcattagt 250  Q
    ||||||||||||||| || ||| ||||| |||||||||||   ||||||||| |  ||||| |  || |||  || ||| |||||||||||||||| ||     
T  1757 agtggcaaggagctccttccaatgacgtgcctggggaataccaggttcgatttccagggggaacaacgattagccagtgcgcatgcctctacgcatgagc 1658  T
Q  251 caaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    ||||||||||| ||||||||||| ||||| |||| ||||||||||    
T  1657 caaattagtcgcccacctttggtgggtcgaaaaccggtgcgaaag 1613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 136 - 292
Target Start/End: Original strand, 68465 - 68621
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaacattg-accggtgagcat 234  Q
    |||| |||||||||||  ||||||||||||||| || |||||||||||| ||| ||||| ||||||||||||   |||||||||  |    |||| ||||    
T  68465 ccaagttgtttgggctctagtggcaaggagctccttccaaggacgtacccgggaaatatcgggttcgattcc-cagggggaacaacgcttgggtgcgcat 68563  T
Q  235 gcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcga 292  Q
    |||||||||||  || |  |||||||| ||||||||||| ||||| |||| |||||||    
T  68564 gcctctacgcacgagccggattagtcgcccacctttggtgggtcgaaaaccggtgcga 68621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 254 - 295
Target Start/End: Original strand, 8232 - 8273
Alignment:
Q  254 attagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  8232 attagtcgtccacctttggtaggtcggaaaccggtgcgaaag 8273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 254 - 295
Target Start/End: Complemental strand, 8741 - 8700
Alignment:
Q  254 attagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  8741 attagtcgtccacctttggtgggtcggaaactggtgcgaaag 8700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 136 - 182
Target Start/End: Complemental strand, 8871 - 8825
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgta 182  Q
    |||| ||||||||||| |||||||||||||||| || ||||||||||    
T  8871 ccaagttgtttgggctccagtggcaaggagctccttccaaggacgta 8825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 38; Significance: 0.000000000003; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 153 - 295
Target Start/End: Complemental strand, 42976 - 42831
Alignment:
Q  153 cagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggggaaca----ttgaccggtgagcatgcctctacgcatta 248  Q
    ||||||||| |||||  || |||| | ||||||||||||||| ||||||||||||| ||| | ||||    |||  | ||| |||||||||||| ||| |    
T  42976 cagtggcaacgagctacttccaagaatgtacctggggaatatcgggttcgattcctagggag-aacaatgcttggtcagtgcgcatgcctctacacatga 42878  T
Q  249 gtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    | |  |||||||| ||||||||||| |||||||||| ||||||||||    
T  42877 gccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaag 42831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 238 - 294
Target Start/End: Original strand, 9495 - 9551
Alignment:
Q  238 tctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaa 294  Q
    ||||||||| || ||||||||||||||||||||||| |||| ||||| |||||||||    
T  9495 tctacgcatgagccaaattagtcgtccacctttggtgggtcagaaaccggtgcgaaa 9551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 9407 - 9455
Alignment:
Q  159 caaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 207  Q
    |||||||||| |||||||||||||| |||||||||  ||||||||||||    
T  9407 caaggagctcctttcaaggacgtacttggggaataccgggttcgattcc 9455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 136 - 192
Target Start/End: Complemental strand, 250174 - 250118
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaat 192  Q
    |||| ||| ||||||| ||||||||||||||||||| |||||||||||| |||||||    
T  250174 ccaagttgcttgggctccagtggcaaggagctcattccaaggacgtacccggggaat 250118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 155 - 207
Target Start/End: Complemental strand, 271216 - 271164
Alignment:
Q  155 gtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 207  Q
    |||||||||||||| || |||||||||||| || |||||| ||||||||||||    
T  271216 gtggcaaggagctccttccaaggacgtacccggagaatatcgggttcgattcc 271164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 136 - 206
Target Start/End: Original strand, 40992 - 41062
Alignment:
Q  136 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattc 206  Q
    |||| ||||||||||| |||||||||||||||| || || ||||||||   |||||||| |||||||||||    
T  40992 ccaagttgtttgggctccagtggcaaggagctccttccatggacgtactcagggaatatcgggttcgattc 41062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 141 - 205
Target Start/End: Original strand, 15284 - 15348
Alignment:
Q  141 ttgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgatt 205  Q
    |||||||||||  ||||||||||||||| || |||||| ||||| ||||||||  ||||||||||    
T  15284 ttgtttgggctctagtggcaaggagctccttacaaggaagtacccggggaataccgggttcgatt 15348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 231 - 295
Target Start/End: Original strand, 6901 - 6965
Alignment:
Q  231 gcatgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||||||||||| || |  ||||||||  |||||||||| |||||||||| ||||||||||    
T  6901 gcatgcctctacgcatgagccggattagtcgctcacctttggtgggtcggaaaccggtgcgaaag 6965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 238 - 298
Target Start/End: Original strand, 25138 - 25198
Alignment:
Q  238 tctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaagaaa 298  Q
    ||||||||| | ||| |||| ||||||||||||||| | |||||||| |||||||||||||    
T  25138 tctacgcatgaatcagattaatcgtccacctttggtggatcggaaaccggtgcgaaagaaa 25198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 295
Target Start/End: Original strand, 224386 - 224427
Alignment:
Q  254 attagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||||||| ||||||| |||||||||| ||||||||||    
T  224386 attagtcgtccatctttggtgggtcggaaaccggtgcgaaag 224427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 231 - 295
Target Start/End: Complemental strand, 2153 - 2089
Alignment:
Q  231 gcatgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||| |||| |||| ||||  |||||||||||||||||  ||||||| || ||||||||||||    
T  2153 gcatgcttctatgcataagtcggattagtcgtccacctttaataggtcgaaagctggtgcgaaag 2089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 231 - 295
Target Start/End: Complemental strand, 155774 - 155710
Alignment:
Q  231 gcatgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||||||||||  || |  |||||||| ||||||||||| |||||||| | ||||||||||    
T  155774 gcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaagccggtgcgaaag 155710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 231 - 295
Target Start/End: Complemental strand, 7898 - 7834
Alignment:
Q  231 gcatgcctctacgcattagtcaaattagtcgtccacctttggtaggtcggaaactggtgcgaaag 295  Q
    |||||||||||||||||||    |||||||| ||||||||||| | |||||||| ||| ||||||    
T  7898 gcatgcctctacgcattagctggattagtcgcccacctttggtggatcggaaaccggtacgaaag 7834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University