View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4094_high_25 (Length: 307)
Name: NF4094_high_25
Description: NF4094
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4094_high_25 |
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Alignment Details
Target: chr7 (Bit Score: 275; Significance: 1e-154; HSPs: 5)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 18 - 296
Target Start/End: Complemental strand, 45283306 - 45283028
Alignment:
| Q |
18 |
gatatgagaaattggttgagtgcggttatctcttacagacaagcttgtatggaaggatttgacgatgcaaatgatggtgagaagaagatcaaggagcaat |
117 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45283306 |
gatatgaggaattggttgagtgcggttatctcttacagacaagcttgtatggaaggatttgacgatgcaaatgatggtgagaagaagatcaaggagcaat |
45283207 |
T |
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| Q |
118 |
tccatgttcagagtttggacagcgtacaaaaggttaccgctgttgcccttgacattgtgactggtttgtccgacatcctccagcaattcaacttgaagtt |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45283206 |
tccatgttcagagtttggacagcgtacaaaaggttaccgctgttgcccttgacattgtgactggtttgtccgacatcctccagcaattcaacttgaagtt |
45283107 |
T |
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| Q |
218 |
tgatgtcaaacctgcttcccgtcgtcttcttaattctgaggtgactgttgacgatcaaggatacccttcatggatctct |
296 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45283106 |
tgatgtcaaacctgcttcccgtcgtcttcttaattctgaggtgactgttgacgatcaaggatacccttcatggatctct |
45283028 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 18 - 299
Target Start/End: Complemental strand, 45294694 - 45294413
Alignment:
| Q |
18 |
gatatgagaaattggttgagtgcggttatctcttacagacaagcttgtatggaaggatttgacgatgcaaatgatggtgagaagaagatcaaggagcaat |
117 |
Q |
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|||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| |
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| T |
45294694 |
gatatgaggaattggttgagtgcagttatctcttacagacaagcttgtatggaaggatttgacgatgaaaatgacggtgagaagaagatcaaggagcaat |
45294595 |
T |
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| Q |
118 |
tccatgttcagagtttggacagcgtacaaaaggttaccgctgttgcccttgacattgtgactggtttgtccgacatcctccagcaattcaacttgaagtt |
217 |
Q |
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| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45294594 |
tagacgttcagagtttggacagcgtacaaaaggttaccgctgttgcccttgacattgtgactggtttgtccgacatcctccagcaattcaacttgaagtt |
45294495 |
T |
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| Q |
218 |
tgatgtcaaacctgcttcccgtcgtcttcttaattctgaggtgactgttgacgatcaaggatacccttcatggatctctgct |
299 |
Q |
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|||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
45294494 |
tgatatcaaacctgcttcccgtcgtcttcttaattctgaggtgactgttgatgatcaaggatacccttcatggatctctgct |
45294413 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 18 - 299
Target Start/End: Complemental strand, 45303654 - 45303373
Alignment:
| Q |
18 |
gatatgagaaattggttgagtgcggttatctcttacagacaagcttgtatggaaggatttgacgatgcaaatgatggtgagaagaagatcaaggagcaat |
117 |
Q |
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|||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| |
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| T |
45303654 |
gatatgaggaattggttgagtgcagttatctcttacagacaagcttgtatggaaggatttgacgatgaaaatgacggtgagaagaagatcaaggagcaat |
45303555 |
T |
|
| Q |
118 |
tccatgttcagagtttggacagcgtacaaaaggttaccgctgttgcccttgacattgtgactggtttgtccgacatcctccagcaattcaacttgaagtt |
217 |
Q |
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| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45303554 |
tagacgttcagagtttggacagcgtacaaaaggttaccgctgttgcccttgacattgtgactggtttgtccgacatcctccagcaattcaacttgaagtt |
45303455 |
T |
|
| Q |
218 |
tgatgtcaaacctgcttcccgtcgtcttcttaattctgaggtgactgttgacgatcaaggatacccttcatggatctctgct |
299 |
Q |
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|||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
45303454 |
tgatatcaaacctgcttcccgtcgtcttcttaattctgaggtgactgttgatgatcaaggatacccttcatggatctctgct |
45303373 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 18 - 296
Target Start/End: Complemental strand, 45271532 - 45271254
Alignment:
| Q |
18 |
gatatgagaaattggttgagtgcggttatctcttacagacaagcttgtatggaaggatttgacgatgcaaatgatggtgagaagaagatcaaggagcaat |
117 |
Q |
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|||||||| |||||||||||||| ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45271532 |
gatatgaggaattggttgagtgcagttatctcttacaaacaaggttgtatggaaggatttgacgatgcaaatgatggtgagaagaagatcaaggagcaat |
45271433 |
T |
|
| Q |
118 |
tccatgttcagagtttggacagcgtacaaaaggttaccgctgttgcccttgacattgtgactggtttgtccgacatcctccagcaattcaacttgaagtt |
217 |
Q |
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||||||||||||||||| |||||||||||||||| || || ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |
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| T |
45271432 |
tccatgttcagagtttgtacagcgtacaaaaggtcacagccgttgcccttgacattgtgactggtttgtctgacatcctccagcaattcaacttgaactt |
45271333 |
T |
|
| Q |
218 |
tgatgtcaaacctgcttcccgtcgtcttcttaattctgaggtgactgttgacgatcaaggatacccttcatggatctct |
296 |
Q |
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|||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45271332 |
tgatatcaaacctccttcccgtcgtcttcttaattctgaggtgactgttgacgatcaaggatacccttcatggatctct |
45271254 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 18 - 299
Target Start/End: Complemental strand, 45275065 - 45274784
Alignment:
| Q |
18 |
gatatgagaaattggttgagtgcggttatctcttacagacaagcttgtatggaaggatttgacgatgcaaatgatggtgagaagaagatcaaggagcaat |
117 |
Q |
| |
|
|||||||| |||||||||||||| || || || ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |
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| T |
45275065 |
gatatgaggaattggttgagtgcagtcatatcctacagacaagcctgtatggaaggatttgacgatgcaaatgatggtgagaagaaaatcaaagagcaat |
45274966 |
T |
|
| Q |
118 |
tccatgttcagagtttggacagcgtacaaaaggttaccgctgttgcccttgacattgtgactggtttgtccgacatcctccagcaattcaacttgaagtt |
217 |
Q |
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|||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45274965 |
tccatgttcagagtttggacagcgtacaaaagatcaccgcggttgcccttgacattgtgactggtttgtccgacatcctccagcaattcaacttgaagtt |
45274866 |
T |
|
| Q |
218 |
tgatgtcaaacctgcttcccgtcgtcttcttaattctgaggtgactgttgacgatcaaggatacccttcatggatctctgct |
299 |
Q |
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|||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45274865 |
tgatatcaaacctctttcccgtcgtcttcttaattctgaggtgactgttgacgatcaaggatacccttcatggatctctgct |
45274784 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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