View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4094_high_26 (Length: 292)
Name: NF4094_high_26
Description: NF4094
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4094_high_26 |
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Alignment Details
Target: chr3 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 1 - 277
Target Start/End: Complemental strand, 33170396 - 33170112
Alignment:
| Q |
1 |
attatatgatttgatgctattaagtttagagtat--------atactatgtattgagttgtgatttgatgctgtttagtttagagtatgcttgtacatac |
92 |
Q |
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| T |
33170396 |
attatatgatttgatgctattaagtttagagtatgcttgtacatactatgtattgagttgtgatttgatgctgtttagtttagagtatgcttgtacatac |
33170297 |
T |
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| Q |
93 |
tatatattgaattaaaaggagttcatcttcgttttagcatcttttgaattgaaaggagtagcaatttaagtgtatttcaaaagttatattctgaatgaag |
192 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33170296 |
tatatattgaattaaaaggagttcatcttcgttttagcatcttttgaattgaaaggagtagcaatttaagtgtatttcaaaagttatattctgaatgaag |
33170197 |
T |
|
| Q |
193 |
agggacataaatcatttcaattcaaatggggcactagggcttgtagacaggatcagaagatgttatacaaattattggttgattt |
277 |
Q |
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|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33170196 |
agggacataaatcatttcaattcaaatggggcactaggacttgtagacaggatcagaagatgttatacaaattattggttgattt |
33170112 |
T |
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