View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4094_high_40 (Length: 242)
Name: NF4094_high_40
Description: NF4094
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4094_high_40 |
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Alignment Details
Target: chr8 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 43015206 - 43014978
Alignment:
| Q |
1 |
cccaattcgtcttctcgggttttcgattctttccaaagttggtgtagagaacaagaattttcttgcaacctttttgtttaccattaaccataacaggtct |
100 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43015206 |
cccaattcgtcttctcgggttttcgattctttccgaagttggtgtagagaacaagaattttcttgcaacctttttgtttaccattaaccataacaggtct |
43015107 |
T |
|
| Q |
101 |
ggtcttaccagttttgtgccatcttgtttctcctcctgtacttccttgtaagtcacactcttcggtttgaatctttctcctctttcgtgttcctgttgta |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43015106 |
ggtcttaccagttttgtgccatcttgtttctcctcctgtacttccttgtaagtcacactcttcggtttgaatctttctcctctttcgtgttcctgttgta |
43015007 |
T |
|
| Q |
201 |
tatgcctttgatggtctatggaaaaagtg |
229 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
43015006 |
tatgcctttgatggtctatggaaaaagtg |
43014978 |
T |
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