View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4094_high_49 (Length: 205)
Name: NF4094_high_49
Description: NF4094
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4094_high_49 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 154; Significance: 7e-82; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 33117577 - 33117379
Alignment:
| Q |
1 |
ctcactttacaagttagttttatagagttgtattaaaccaaaccacatattctaatagttctatttcaatcttcattgattccttttcctcacgaagtct |
100 |
Q |
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| T |
33117577 |
ctcactttacaaattagttttatggagttgtattaaaccaaaccacttattctaatagttctatttcaatcttgattgattccttttcctcacgaagtct |
33117478 |
T |
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| Q |
101 |
ctgtgtttgattttgtatagtgtaattttggagggtaattgcacgggtatcaagtaaagtgtaaaataagagtgactacattaatactcaagtatagtaa |
200 |
Q |
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| T |
33117477 |
ctgtatttaattt------gtataattttggagggtaattgcacgggtatcaagtaaagtgtaaaataagagtgactacattaatactcaagtatagtaa |
33117384 |
T |
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