View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4094_high_6 (Length: 475)
Name: NF4094_high_6
Description: NF4094
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4094_high_6 |
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Alignment Details
Target: chr8 (Bit Score: 392; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 392; E-Value: 0
Query Start/End: Original strand, 1 - 460
Target Start/End: Original strand, 43015317 - 43015776
Alignment:
| Q |
1 |
aatcaaagatgaattagtgtaataacaacaaccggtgaaggaagttgtggagaacataattataatatcaatggaagaagatatagtgtaagtggaagtt |
100 |
Q |
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| T |
43015317 |
aatcaaagaataattagtgcaacaacaacaactggtgaaggaagtggtggagaacctaattataatatcaatggaagaagagatagtggaagtggaagtt |
43015416 |
T |
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| Q |
101 |
cttcttctaaggaaattgttactcagattcatagagatgaaatgtctgctgttgttggtgtccctagtcctttaacaagcttcacaaatgctttggatat |
200 |
Q |
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| T |
43015417 |
cttcttctaaggaaattgttactcagattcatagagatgaaatgtctgctgttgttggtgtccctagtcctttaacaagcttcacaaatgctttggatat |
43015516 |
T |
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| Q |
201 |
tcaacaccttaaatctgatcattttggcttcatcccatttcgaaaaagctatgatgaagtaagttacatatattatacagtaagacacttatgattgaag |
300 |
Q |
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| T |
43015517 |
tcaacaccttaaatctgatcattttggcttcatcccatttcgaaaaagctatgatgaagtaagttacatatattatacagtaagacacttctgattgaag |
43015616 |
T |
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| Q |
301 |
atatgtctagtgtttgacacatgttcatgtctgacaccgacatatatagttacattcaaccactttcattttttcaaattacggcttgcatcaatgtctt |
400 |
Q |
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| T |
43015617 |
atatgtctagtgtttgacacatgttcatgtctgacaccgacatatatagttacaatcaaccatttttattttttcaaattacggcttgcatcaatgtctt |
43015716 |
T |
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| Q |
401 |
acttttatgtccggaatatgtgcaagtttttcatataaatcatggttcattaaaaccact |
460 |
Q |
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| T |
43015717 |
acttttgtgtccggaatatgtgcaagtgtttcatataaatcatcgttcattaaacccact |
43015776 |
T |
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