View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4094_low_1 (Length: 665)

Name: NF4094_low_1
Description: NF4094
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4094_low_1
NF4094_low_1
[»] chr4 (79 HSPs)
chr4 (13-431)||(4608676-4609093)
chr4 (475-648)||(4609137-4609310)
chr4 (539-648)||(24637740-24637850)
chr4 (539-598)||(26510422-26510481)
chr4 (558-648)||(42398570-42398660)
chr4 (556-602)||(54983110-54983156)
chr4 (539-603)||(47044459-47044523)
chr4 (546-589)||(32006976-32007019)
chr4 (13-51)||(33389896-33389934)
chr4 (539-589)||(34409967-34410017)
chr4 (13-55)||(47683476-47683518)
chr4 (539-589)||(53451069-53451119)
chr4 (511-627)||(19545388-19545504)
chr4 (539-598)||(34035706-34035765)
chr4 (21-55)||(4505831-4505865)
chr4 (13-55)||(20004775-20004817)
chr4 (13-55)||(48458464-48458506)
chr4 (547-589)||(50561448-50561490)
chr4 (475-588)||(2011908-2012021)
chr4 (23-55)||(28511722-28511754)
chr4 (23-55)||(28513521-28513553)
chr4 (546-598)||(34659085-34659137)
chr4 (15-55)||(54055336-54055376)
chr4 (546-597)||(10727236-10727287)
chr4 (546-597)||(10941005-10941056)
chr4 (539-598)||(43317444-43317503)
chr4 (20-55)||(52635955-52635990)
chr4 (21-55)||(1237541-1237575)
chr4 (17-47)||(22160396-22160426)
chr4 (539-589)||(23019573-23019623)
chr4 (17-47)||(23315945-23315975)
chr4 (13-55)||(24916049-24916091)
chr4 (13-55)||(28477054-28477096)
chr4 (539-589)||(31135077-31135127)
chr4 (13-47)||(31444957-31444991)
chr4 (13-47)||(33997722-33997756)
chr4 (539-597)||(37143508-37143566)
chr4 (13-47)||(38490897-38490931)
chr4 (539-589)||(40314812-40314862)
chr4 (539-589)||(40324888-40324938)
chr4 (13-47)||(48458079-48458113)
chr4 (22-55)||(20681020-20681053)
chr4 (22-55)||(23628113-23628146)
chr4 (26-55)||(25881839-25881868)
chr4 (22-55)||(27746684-27746717)
chr4 (22-55)||(35519437-35519470)
chr4 (13-46)||(45637842-45637875)
chr4 (23-55)||(742956-742988)
chr4 (21-53)||(4088088-4088120)
chr4 (23-55)||(6028628-6028660)
chr4 (23-55)||(8151027-8151059)
chr4 (23-55)||(9097956-9097988)
chr4 (23-55)||(10262460-10262492)
chr4 (23-55)||(11180730-11180762)
chr4 (23-55)||(13860144-13860176)
chr4 (23-55)||(15518427-15518459)
chr4 (23-55)||(17976270-17976302)
chr4 (22-50)||(19587493-19587521)
chr4 (23-55)||(21561963-21561995)
chr4 (23-55)||(24080531-24080563)
chr4 (23-55)||(26097870-26097902)
chr4 (16-56)||(26877684-26877724)
chr4 (23-55)||(28361712-28361744)
chr4 (13-53)||(31106162-31106202)
chr4 (23-55)||(32137868-32137900)
chr4 (23-55)||(32201173-32201205)
chr4 (546-598)||(34334770-34334822)
chr4 (23-55)||(34664673-34664705)
chr4 (23-55)||(39651558-39651590)
chr4 (23-55)||(39657536-39657568)
chr4 (23-55)||(40664852-40664884)
chr4 (23-55)||(41986740-41986772)
chr4 (23-55)||(43329484-43329516)
chr4 (14-46)||(44670477-44670509)
chr4 (23-55)||(44856004-44856036)
chr4 (23-55)||(46046014-46046046)
chr4 (23-55)||(51153306-51153338)
chr4 (23-55)||(51187486-51187518)
chr4 (23-55)||(51449550-51449582)
[»] chr8 (64 HSPs)
chr8 (94-346)||(43219288-43219540)
chr8 (509-648)||(9187361-9187499)
chr8 (539-648)||(9788558-9788667)
chr8 (556-648)||(24411956-24412048)
chr8 (10-53)||(4438566-4438609)
chr8 (539-598)||(11929810-11929869)
chr8 (539-598)||(11941424-11941483)
chr8 (475-598)||(13369336-13369459)
chr8 (13-50)||(11420416-11420453)
chr8 (539-598)||(15044473-15044532)
chr8 (13-55)||(3501388-3501430)
chr8 (13-55)||(31261300-31261342)
chr8 (13-55)||(34882316-34882358)
chr8 (14-51)||(10794644-10794681)
chr8 (13-55)||(1351706-1351749)
chr8 (547-598)||(4535793-4535844)
chr8 (539-602)||(31268034-31268097)
chr8 (547-598)||(42862472-42862523)
chr8 (13-55)||(1284186-1284228)
chr8 (17-47)||(1657948-1657978)
chr8 (539-597)||(1759738-1759796)
chr8 (13-47)||(2442283-2442317)
chr8 (17-47)||(6335895-6335925)
chr8 (13-55)||(12261693-12261735)
chr8 (13-47)||(15920100-15920134)
chr8 (539-597)||(16822922-16822980)
chr8 (539-597)||(28969827-28969885)
chr8 (21-55)||(34151143-34151177)
chr8 (13-47)||(39131799-39131833)
chr8 (22-55)||(38137937-38137970)
chr8 (13-54)||(41372505-41372546)
chr8 (23-55)||(170413-170445)
chr8 (23-55)||(2185074-2185106)
chr8 (15-55)||(3541211-3541251)
chr8 (13-53)||(4437487-4437527)
chr8 (23-55)||(6303123-6303155)
chr8 (23-55)||(6746981-6747013)
chr8 (23-55)||(6815381-6815413)
chr8 (23-55)||(11579015-11579047)
chr8 (23-55)||(11924119-11924151)
chr8 (546-586)||(13575748-13575788)
chr8 (546-602)||(16243549-16243605)
chr8 (13-53)||(17950023-17950063)
chr8 (23-55)||(20666054-20666086)
chr8 (558-598)||(23085788-23085828)
chr8 (23-55)||(23969039-23969071)
chr8 (23-55)||(27914338-27914370)
chr8 (23-55)||(27960757-27960789)
chr8 (13-53)||(29767350-29767390)
chr8 (23-55)||(30551416-30551448)
chr8 (23-55)||(33848908-33848940)
chr8 (23-55)||(36059496-36059528)
chr8 (23-55)||(37027304-37027336)
chr8 (23-55)||(37034646-37034678)
chr8 (23-55)||(38139135-38139167)
chr8 (23-55)||(38909109-38909141)
chr8 (23-55)||(39486248-39486280)
chr8 (23-55)||(39525275-39525307)
chr8 (23-55)||(40048889-40048921)
chr8 (23-55)||(41526137-41526169)
chr8 (23-55)||(42063313-42063345)
chr8 (23-55)||(44216166-44216198)
chr8 (23-55)||(44937878-44937910)
chr8 (23-55)||(45139269-45139301)
[»] scaffold0112 (1 HSPs)
scaffold0112 (95-349)||(33194-33448)
[»] scaffold0093 (1 HSPs)
scaffold0093 (95-297)||(17597-17799)
[»] chr5 (56 HSPs)
chr5 (85-203)||(16042671-16042789)
chr5 (110-345)||(15616828-15617063)
chr5 (13-55)||(14001117-14001159)
chr5 (13-55)||(29686221-29686263)
chr5 (510-648)||(30841247-30841383)
chr5 (487-602)||(38098999-38099114)
chr5 (13-55)||(833892-833934)
chr5 (539-597)||(19288990-19289048)
chr5 (539-602)||(35583381-35583444)
chr5 (546-588)||(16312817-16312859)
chr5 (13-55)||(37516885-37516927)
chr5 (13-50)||(40715808-40715845)
chr5 (13-53)||(1539329-1539369)
chr5 (546-598)||(28400189-28400241)
chr5 (15-55)||(29632710-29632750)
chr5 (13-53)||(33322250-33322290)
chr5 (539-598)||(1612169-1612228)
chr5 (539-598)||(8839665-8839724)
chr5 (547-598)||(25536460-25536511)
chr5 (546-600)||(1093642-1093696)
chr5 (15-53)||(5730312-5730350)
chr5 (539-597)||(7464281-7464339)
chr5 (21-55)||(14205324-14205358)
chr5 (13-55)||(19565090-19565132)
chr5 (13-47)||(23085337-23085371)
chr5 (539-589)||(27174996-27175046)
chr5 (13-55)||(29663432-29663474)
chr5 (17-47)||(31172286-31172316)
chr5 (13-55)||(31378193-31378235)
chr5 (13-47)||(35373319-35373353)
chr5 (17-51)||(35588615-35588649)
chr5 (13-47)||(37142759-37142793)
chr5 (13-55)||(37516555-37516596)
chr5 (17-47)||(41879793-41879823)
chr5 (20-53)||(4460524-4460557)
chr5 (557-598)||(15341479-15341520)
chr5 (14-55)||(18282264-18282305)
chr5 (23-55)||(790279-790311)
chr5 (23-55)||(2000888-2000920)
chr5 (23-55)||(2463467-2463499)
chr5 (23-55)||(3246651-3246683)
chr5 (23-55)||(10042616-10042648)
chr5 (549-589)||(10542847-10542887)
chr5 (23-55)||(11832455-11832487)
chr5 (13-41)||(17822386-17822414)
chr5 (23-55)||(19393011-19393043)
chr5 (23-51)||(28400379-28400407)
chr5 (23-55)||(28746538-28746570)
chr5 (23-55)||(29874886-29874918)
chr5 (23-55)||(31298193-31298225)
chr5 (23-55)||(35380633-35380665)
chr5 (23-55)||(36515687-36515719)
chr5 (23-55)||(37461449-37461481)
chr5 (23-55)||(40307683-40307715)
chr5 (23-55)||(40507020-40507052)
chr5 (23-55)||(42416527-42416559)
[»] chr7 (72 HSPs)
chr7 (510-648)||(22701595-22701732)
chr7 (475-589)||(39786299-39786413)
chr7 (13-53)||(24650005-24650045)
chr7 (16-55)||(28069670-28069709)
chr7 (539-598)||(36251527-36251586)
chr7 (557-648)||(48103043-48103134)
chr7 (13-55)||(38237480-38237522)
chr7 (489-598)||(17038279-17038388)
chr7 (546-598)||(4785646-4785698)
chr7 (546-598)||(4818646-4818698)
chr7 (475-599)||(9334466-9334590)
chr7 (546-602)||(14553676-14553732)
chr7 (559-603)||(27484422-27484466)
chr7 (496-599)||(39465551-39465655)
chr7 (559-646)||(39522800-39522890)
chr7 (547-602)||(1460418-1460473)
chr7 (13-56)||(32358884-32358927)
chr7 (13-56)||(36925323-36925366)
chr7 (13-55)||(35338384-35338426)
chr7 (13-55)||(39959409-39959451)
chr7 (13-55)||(47439798-47439840)
chr7 (18-55)||(27425680-27425717)
chr7 (539-648)||(7809623-7809735)
chr7 (13-53)||(10039952-10039992)
chr7 (23-55)||(20135582-20135614)
chr7 (539-599)||(29693207-29693266)
chr7 (558-589)||(3531001-3531032)
chr7 (539-598)||(19396869-19396928)
chr7 (537-588)||(26710378-26710429)
chr7 (546-597)||(27724956-27725007)
chr7 (539-598)||(30908435-30908494)
chr7 (539-598)||(48109469-48109528)
chr7 (21-55)||(1292086-1292120)
chr7 (17-47)||(5096508-5096538)
chr7 (539-589)||(7468646-7468696)
chr7 (17-55)||(7606279-7606317)
chr7 (539-589)||(9412446-9412496)
chr7 (13-55)||(22711475-22711517)
chr7 (539-589)||(25834353-25834403)
chr7 (539-589)||(27250552-27250602)
chr7 (539-589)||(27723083-27723133)
chr7 (13-55)||(38651681-38651723)
chr7 (13-47)||(47437799-47437833)
chr7 (13-42)||(3434064-3434093)
chr7 (14-55)||(4094294-4094335)
chr7 (556-589)||(4996126-4996159)
chr7 (556-589)||(15994432-15994465)
chr7 (558-599)||(40417373-40417414)
chr7 (13-46)||(42851125-42851158)
chr7 (23-55)||(4404119-4404151)
chr7 (23-55)||(4406848-4406880)
chr7 (23-55)||(6606427-6606459)
chr7 (23-55)||(6914011-6914043)
chr7 (15-47)||(7192295-7192327)
chr7 (560-588)||(12328376-12328404)
chr7 (23-55)||(16933679-16933711)
chr7 (23-55)||(16939062-16939094)
chr7 (23-55)||(19036793-19036825)
chr7 (23-55)||(20717811-20717843)
chr7 (23-55)||(20762492-20762524)
chr7 (23-55)||(29488058-29488090)
chr7 (15-55)||(32806602-32806642)
chr7 (23-55)||(33233088-33233120)
chr7 (23-55)||(34285230-34285262)
chr7 (23-55)||(35910100-35910132)
chr7 (23-55)||(37310614-37310646)
chr7 (23-55)||(40036238-40036270)
chr7 (23-55)||(42829474-42829506)
chr7 (23-55)||(43110857-43110889)
chr7 (23-55)||(47139581-47139613)
chr7 (23-55)||(47575988-47576020)
chr7 (23-55)||(47840554-47840586)
[»] chr3 (56 HSPs)
chr3 (537-603)||(14770949-14771015)
chr3 (475-598)||(49758590-49758713)
chr3 (13-55)||(2594509-2594551)
chr3 (537-603)||(21967207-21967273)
chr3 (537-603)||(21989643-21989709)
chr3 (539-598)||(23267846-23267905)
chr3 (475-589)||(29626019-29626133)
chr3 (547-599)||(21495407-21495459)
chr3 (539-598)||(19468231-19468290)
chr3 (20-55)||(34230509-34230544)
chr3 (14-53)||(36643583-36643622)
chr3 (13-55)||(21594492-21594534)
chr3 (13-55)||(47409629-47409671)
chr3 (529-583)||(49429976-49430030)
chr3 (13-51)||(50585774-50585812)
chr3 (23-55)||(10617010-10617042)
chr3 (8-55)||(13867251-13867297)
chr3 (16-55)||(21363659-21363698)
chr3 (17-48)||(42618142-42618173)
chr3 (13-55)||(65983-66025)
chr3 (13-47)||(17583248-17583282)
chr3 (539-597)||(17589982-17590040)
chr3 (539-597)||(18875278-18875336)
chr3 (17-47)||(28170641-28170671)
chr3 (13-47)||(36637192-36637226)
chr3 (13-55)||(41988470-41988512)
chr3 (17-47)||(44177008-44177038)
chr3 (539-589)||(45879613-45879663)
chr3 (13-47)||(47968346-47968380)
chr3 (17-50)||(12170948-12170981)
chr3 (558-603)||(20838039-20838084)
chr3 (14-47)||(54114377-54114410)
chr3 (23-56)||(54831503-54831536)
chr3 (23-55)||(915855-915887)
chr3 (23-55)||(5254905-5254937)
chr3 (546-598)||(7791453-7791505)
chr3 (21-53)||(8231690-8231722)
chr3 (510-602)||(13475555-13475646)
chr3 (554-598)||(30806075-30806119)
chr3 (23-55)||(33899744-33899776)
chr3 (15-55)||(34413314-34413354)
chr3 (518-602)||(34667263-34667346)
chr3 (23-55)||(35530037-35530069)
chr3 (23-55)||(35690933-35690965)
chr3 (23-55)||(37413171-37413203)
chr3 (24-56)||(39199172-39199204)
chr3 (23-55)||(39721084-39721116)
chr3 (23-55)||(39798993-39799025)
chr3 (23-55)||(41991886-41991918)
chr3 (23-55)||(42188440-42188472)
chr3 (23-55)||(43317073-43317105)
chr3 (23-55)||(44075847-44075879)
chr3 (23-55)||(44762944-44762976)
chr3 (23-55)||(46851172-46851204)
chr3 (23-55)||(50932549-50932581)
chr3 (23-55)||(52468328-52468360)
[»] chr1 (62 HSPs)
chr1 (556-644)||(32591328-32591416)
chr1 (475-598)||(23773554-23773681)
chr1 (546-599)||(13281209-13281262)
chr1 (557-602)||(48420336-48420381)
chr1 (556-648)||(15474839-15474931)
chr1 (496-603)||(43019720-43019830)
chr1 (10-53)||(31239095-31239138)
chr1 (523-598)||(36605709-36605784)
chr1 (17-55)||(21966268-21966306)
chr1 (489-589)||(6045041-6045141)
chr1 (565-644)||(777288-777367)
chr1 (510-581)||(898712-898783)
chr1 (546-589)||(13315386-13315429)
chr1 (13-55)||(5257088-5257130)
chr1 (13-55)||(10427369-10427411)
chr1 (13-55)||(12294476-12294518)
chr1 (547-641)||(27579553-27579647)
chr1 (556-589)||(15596784-15596817)
chr1 (14-55)||(27348988-27349029)
chr1 (539-588)||(43416086-43416135)
chr1 (23-55)||(11606843-11606875)
chr1 (23-55)||(44821040-44821072)
chr1 (16-55)||(6295046-6295085)
chr1 (539-598)||(13309235-13309294)
chr1 (546-621)||(17504360-17504435)
chr1 (13-55)||(43019496-43019539)
chr1 (539-589)||(8209624-8209674)
chr1 (13-47)||(17124629-17124663)
chr1 (539-589)||(17580038-17580088)
chr1 (25-55)||(33218427-33218457)
chr1 (13-47)||(35112429-35112463)
chr1 (13-55)||(38901165-38901207)
chr1 (556-598)||(42676550-42676592)
chr1 (539-589)||(48455119-48455169)
chr1 (13-55)||(49840478-49840520)
chr1 (13-46)||(2653377-2653410)
chr1 (14-55)||(9848383-9848424)
chr1 (13-46)||(11463911-11463944)
chr1 (553-602)||(25222765-25222814)
chr1 (23-56)||(34652115-34652148)
chr1 (23-56)||(44065574-44065607)
chr1 (23-55)||(1322737-1322769)
chr1 (15-55)||(6013007-6013046)
chr1 (23-55)||(7308671-7308703)
chr1 (14-46)||(7910074-7910106)
chr1 (546-598)||(12266770-12266822)
chr1 (23-55)||(16096696-16096728)
chr1 (23-55)||(17366566-17366598)
chr1 (23-55)||(18090833-18090865)
chr1 (23-55)||(18109286-18109318)
chr1 (23-55)||(24473770-24473802)
chr1 (558-602)||(27928599-27928643)
chr1 (23-55)||(33932743-33932775)
chr1 (558-598)||(34555283-34555323)
chr1 (23-55)||(39729424-39729456)
chr1 (23-55)||(39879356-39879388)
chr1 (23-55)||(43122383-43122415)
chr1 (23-55)||(43257203-43257235)
chr1 (21-53)||(44440433-44440465)
chr1 (23-55)||(46040783-46040815)
chr1 (23-55)||(49571029-49571061)
chr1 (23-55)||(50397617-50397649)
[»] chr2 (60 HSPs)
chr2 (539-648)||(31555640-31555747)
chr2 (476-589)||(16039110-16039223)
chr2 (7-55)||(28416984-28417032)
chr2 (540-602)||(17640957-17641019)
chr2 (13-53)||(11090128-11090168)
chr2 (475-598)||(9243846-9243969)
chr2 (13-55)||(8904952-8904994)
chr2 (13-55)||(11681636-11681678)
chr2 (13-55)||(11694210-11694252)
chr2 (13-55)||(12599551-12599593)
chr2 (13-47)||(23914615-23914649)
chr2 (13-53)||(38502279-38502320)
chr2 (510-598)||(37867430-37867518)
chr2 (539-599)||(42444398-42444458)
chr2 (539-602)||(5879976-5880038)
chr2 (554-589)||(19133173-19133208)
chr2 (559-598)||(27912913-27912952)
chr2 (547-598)||(39809261-39809312)
chr2 (547-598)||(40301797-40301848)
chr2 (539-602)||(42651709-42651772)
chr2 (10-52)||(960300-960342)
chr2 (13-47)||(1071697-1071731)
chr2 (13-55)||(3752474-3752516)
chr2 (539-589)||(15248974-15249024)
chr2 (21-55)||(27649240-27649274)
chr2 (539-589)||(29462611-29462661)
chr2 (17-47)||(31054321-31054351)
chr2 (13-55)||(33201267-33201309)
chr2 (13-51)||(37242075-37242113)
chr2 (13-47)||(40303020-40303054)
chr2 (14-55)||(2001197-2001238)
chr2 (17-50)||(14750408-14750441)
chr2 (17-54)||(25637641-25637678)
chr2 (13-50)||(27158720-27158757)
chr2 (539-596)||(33134906-33134963)
chr2 (14-55)||(44019445-44019486)
chr2 (23-55)||(668514-668546)
chr2 (558-602)||(740906-740950)
chr2 (23-55)||(1117851-1117883)
chr2 (23-55)||(1995588-1995620)
chr2 (23-55)||(3079541-3079573)
chr2 (556-588)||(3171647-3171679)
chr2 (23-55)||(3708031-3708063)
chr2 (23-55)||(6345383-6345415)
chr2 (23-55)||(9799787-9799819)
chr2 (23-55)||(11869353-11869385)
chr2 (23-55)||(13552121-13552153)
chr2 (23-55)||(14325860-14325892)
chr2 (13-53)||(16573872-16573912)
chr2 (546-598)||(21566032-21566084)
chr2 (23-55)||(22077982-22078014)
chr2 (546-598)||(25915377-25915429)
chr2 (23-55)||(28499894-28499926)
chr2 (23-55)||(32292233-32292265)
chr2 (23-55)||(35287869-35287901)
chr2 (23-55)||(35360746-35360778)
chr2 (23-55)||(38709530-38709562)
chr2 (23-55)||(38878963-38878995)
chr2 (23-55)||(40202054-40202086)
chr2 (23-55)||(41452657-41452689)
[»] scaffold1017 (2 HSPs)
scaffold1017 (509-648)||(2375-2515)
scaffold1017 (13-47)||(2039-2073)
[»] scaffold0013 (1 HSPs)
scaffold0013 (540-643)||(101338-101441)
[»] chr6 (30 HSPs)
chr6 (539-598)||(13240894-13240953)
chr6 (475-598)||(23124191-23124314)
chr6 (13-55)||(8866864-8866906)
chr6 (13-55)||(32279611-32279653)
chr6 (546-589)||(26306456-26306499)
chr6 (509-598)||(9894596-9894685)
chr6 (541-597)||(2441258-2441314)
chr6 (556-596)||(14912261-14912301)
chr6 (17-53)||(29729665-29729701)
chr6 (539-598)||(14426430-14426489)
chr6 (539-598)||(17942293-17942352)
chr6 (13-47)||(4578010-4578044)
chr6 (13-47)||(15926177-15926211)
chr6 (13-47)||(32570377-32570411)
chr6 (13-55)||(33007743-33007785)
chr6 (13-47)||(34806414-34806448)
chr6 (17-50)||(1930785-1930818)
chr6 (17-50)||(3054388-3054421)
chr6 (22-55)||(8872564-8872597)
chr6 (19-56)||(28219488-28219525)
chr6 (23-55)||(173281-173313)
chr6 (23-55)||(246997-247029)
chr6 (23-55)||(6018792-6018824)
chr6 (23-55)||(7540930-7540962)
chr6 (23-55)||(12582920-12582952)
chr6 (23-55)||(13459383-13459415)
chr6 (546-598)||(17829620-17829672)
chr6 (23-55)||(28231634-28231666)
chr6 (545-589)||(30591104-30591148)
chr6 (23-55)||(34318766-34318798)
[»] scaffold0047 (1 HSPs)
scaffold0047 (13-53)||(65555-65595)
[»] scaffold0154 (1 HSPs)
scaffold0154 (510-598)||(32809-32897)
[»] scaffold0128 (1 HSPs)
scaffold0128 (475-598)||(43308-43431)
[»] scaffold0092 (1 HSPs)
scaffold0092 (558-648)||(6515-6606)
[»] scaffold0734 (1 HSPs)
scaffold0734 (539-602)||(4200-4263)
[»] scaffold0035 (1 HSPs)
scaffold0035 (17-47)||(81865-81895)
[»] scaffold0018 (1 HSPs)
scaffold0018 (13-47)||(36830-36864)
[»] scaffold0009 (1 HSPs)
scaffold0009 (18-56)||(53727-53765)
[»] scaffold1777 (1 HSPs)
scaffold1777 (14-47)||(615-648)
[»] scaffold0038 (2 HSPs)
scaffold0038 (19-56)||(19986-20023)
scaffold0038 (23-55)||(32131-32163)
[»] scaffold0283 (1 HSPs)
scaffold0283 (23-55)||(9218-9250)
[»] scaffold0078 (1 HSPs)
scaffold0078 (23-51)||(5869-5897)
[»] scaffold0068 (1 HSPs)
scaffold0068 (558-598)||(57295-57335)


Alignment Details
Target: chr4 (Bit Score: 332; Significance: 0; HSPs: 79)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 332; E-Value: 0
Query Start/End: Original strand, 13 - 431
Target Start/End: Original strand, 4608676 - 4609093
Alignment:
Q  13 aatataacaaatataatataaattcttatctttttgaatgacaaggcttgatacgtttcttcatgtaactactttcagattgaacctgattctcttgtct 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||||||||||||||    
T  4608676 aatataacaaatataatataaattcttatctttttgaatgacaaggcttgatacgttccttcatgtaactactttcagaccgaacctgattctcttgtct 4608775  T
Q  113 ctcgtatttacaaggctcggtattttccttcctgtaactacttgacggaaaatttaggtcacaatcctagctatgaatcgagaagtattttaaaggcgt- 211  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| |||| |||||||||||||||||||||||     
T  4608776 ctcgtatttacaaggctcggtattttcctttctgtaactacttgacgaaaaatttaggtcacaatcctagttatgtatcgagaagtattttaaaggcgta 4608875  T
Q  212 -gcttcatagtgcaccatgggtcgcatttgtgtattggtattagtcactctatatctatacttgatgagtcattgttgttgaatggggaccgcatagacg 310  Q
     |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||| |    
T  4608876 cgcttcatagtgcaccatgggtcacatttgtgtattggtatgagtcactctatatctatacttcatgagtcatggtttttgaatggggaccgcatagatg 4608975  T
Q  311 gaaatagtgtggggaaaaactttgtgagggatttttctaagtatagacatcaacagaatagataaatttttacatgatttgtttaaggtgtaattgaaag 410  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | ||   |||||||||||||||||||    
T  4608976 gaaatagtgtggggaaaaactttgtgagggatttttctaagtatagacatcaacagtatagataaatttttacgttat---tttaaggtgtaattgaaag 4609072  T
Q  411 tgaaaaagtcagctgaaatcc 431  Q
    |||||||||||||||||||||    
T  4609073 tgaaaaagtcagctgaaatcc 4609093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 475 - 648
Target Start/End: Original strand, 4609137 - 4609310
Alignment:
Q  475 aagaaaataacatcttttgattcttttgaactgtctttttctccttcgaaaatcatcatcatcattcaattcaaatatcatatataacaaatagataaga 574  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  4609137 aagaaaataacatcttttgattcttttgaactgtctttttctccttcgaaaatcaccatcatcattcaattcaaatatcatatataacaaatagataaga 4609236  T
Q  575 gtaaattcaaatattcaaacaaaatgtatcctattttatatgtctgaatttttcattatcatttaaaaaagata 648  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||||||||    
T  4609237 gtaaattcaaatattcaaacaaaatgtatcaaattttatatgtctgaatttttcgttatcatttaaaaaagata 4609310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 539 - 648
Target Start/End: Original strand, 24637740 - 24637850
Alignment:
Q  539 ttcaattcaaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaaatgtatcctattttatatgtctgaatttt-tcattatcatt 637  Q
    |||||| |||||| || ||| |||||||||||||||||||||||||||||| ||||  |||||| |  ||| ||||| ||||| |||| || ||||||||    
T  24637740 ttcaatacaaataacacatacaacaaatagataagagtaaattcaaatattgaaacccaatgtaacaaattgtatatctctgatttttatccttatcatt 24637839  T
Q  638 taaaaaagata 648  Q
    |||||||||||    
T  24637840 taaaaaagata 24637850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 539 - 598
Target Start/End: Complemental strand, 26510481 - 26510422
Alignment:
Q  539 ttcaattcaaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaaa 598  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||||| ||| ||||    
T  26510481 ttcaatacaaatatcacatataacaaatagataagagtaaattcaaatattaaaataaaa 26510422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 558 - 648
Target Start/End: Complemental strand, 42398660 - 42398570
Alignment:
Q  558 ataacaaatagataagagtaaattcaaatattcaaacaaaatgtatcctattttatatgtctgaatttttcattatcatttaaaaaagata 648  Q
    |||||||||||||||||||  ||| ||||||| |||||||||||| |  ||||| ||||||||| |||||  |||| ||||||||||||||    
T  42398660 ataacaaatagataagagtgtatttaaatattaaaacaaaatgtaacaaattttgtatgtctgatttttttcttataatttaaaaaagata 42398570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 556 - 602
Target Start/End: Original strand, 54983110 - 54983156
Alignment:
Q  556 atataacaaatagataagagtaaattcaaatattcaaacaaaatgta 602  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||    
T  54983110 atataacaaatagataagagtaaattcaaatattaaaacaaaatgta 54983156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 539 - 603
Target Start/End: Complemental strand, 47044523 - 47044459
Alignment:
Q  539 ttcaattcaaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaaatgtat 603  Q
    |||||| |||||| || |||||||||||| ||||||||||||||||||||| ||||||| |||||    
T  47044523 ttcaatacaaatagcacatataacaaatatataagagtaaattcaaatattaaaacaaattgtat 47044459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 546 - 589
Target Start/End: Complemental strand, 32007019 - 32006976
Alignment:
Q  546 caaatatcatatataacaaatagataagagtaaattcaaatatt 589  Q
    |||||| |||||||||||||||||||||||||||||||||||||    
T  32007019 caaataacatatataacaaatagataagagtaaattcaaatatt 32006976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 51
Target Start/End: Original strand, 33389896 - 33389934
Alignment:
Q  13 aatataacaaatataatataaattcttatctttttgaat 51  Q
    |||||||||||||||||||||||||||||||||||||||    
T  33389896 aatataacaaatataatataaattcttatctttttgaat 33389934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 539 - 589
Target Start/End: Complemental strand, 34410017 - 34409967
Alignment:
Q  539 ttcaattcaaatatcatatataacaaatagataagagtaaattcaaatatt 589  Q
    |||||| |||||| || ||||||||||||||||||||||||||||||||||    
T  34410017 ttcaatacaaataacacatataacaaatagataagagtaaattcaaatatt 34409967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 47683518 - 47683476
Alignment:
Q  13 aatataacaaatataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  47683518 aatataacaaatataatataaattcttatatttttgaatgaca 47683476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 539 - 589
Target Start/End: Original strand, 53451069 - 53451119
Alignment:
Q  539 ttcaattcaaatatcatatataacaaatagataagagtaaattcaaatatt 589  Q
    |||||| |||||| || ||||||||||||||||||||||||||||||||||    
T  53451069 ttcaatacaaataacacatataacaaatagataagagtaaattcaaatatt 53451119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 511 - 627
Target Start/End: Original strand, 19545388 - 19545504
Alignment:
Q  511 ttttctccttcgaaaatcatcatcatcattcaattcaaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaaatgtatcctattt 610  Q
    |||||| |||| ||||| | | ||| |||||||| |||||| || |||||| ||||| ||||||||||||| ||||||| ||| |||||||| |  | |     
T  19545388 ttttcttcttccaaaattaccttcaacattcaatgcaaatagcacatataagaaatatataagagtaaatttaaatattaaaataaaatgtaacaaactg 19545487  T
Q  611 tatatgtctgaattttt 627  Q
    ||||||||||| |||||    
T  19545488 tatatgtctgatttttt 19545504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 539 - 598
Target Start/End: Original strand, 34035706 - 34035765
Alignment:
Q  539 ttcaattcaaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaaa 598  Q
    ||||||||||||| || ||||||||||||||||||  |||||||||||||| ||| ||||    
T  34035706 ttcaattcaaataacacatataacaaatagataaggataaattcaaatattaaaataaaa 34035765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 55
Target Start/End: Complemental strand, 4505865 - 4505831
Alignment:
Q  21 aaatataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||||||||||||    
T  4505865 aaatataatataaattcttatctttttgaatgaca 4505831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 20004775 - 20004817
Alignment:
Q  13 aatataacaaatataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||||||| ||||| |||||||    
T  20004775 aatataacaaatataatataaattcttatattttttaatgaca 20004817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 48458506 - 48458464
Alignment:
Q  13 aatataacaaatataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||||||| |||||||| ||||    
T  48458506 aatataacaaatataatataaattcttatttttttgaacgaca 48458464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 547 - 589
Target Start/End: Complemental strand, 50561490 - 50561448
Alignment:
Q  547 aaatatcatatataacaaatagataagagtaaattcaaatatt 589  Q
    ||||||||||||||| ||||||||||||||||||| |||||||    
T  50561490 aaatatcatatataataaatagataagagtaaatttaaatatt 50561448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 475 - 588
Target Start/End: Complemental strand, 2012021 - 2011908
Alignment:
Q  475 aagaaaataacatcttttgattcttttgaactgtctttttctccttcgaaaatcatcatcatcattcaattcaaatatcatatataacaaatagataaga 574  Q
    ||||||||||||| |||||  ||||||| | || ||||||||| ||  ||||| | | ||| | |||||| |||||  || |||||||||||| ||||||    
T  2012021 aagaaaataacatgttttgcctcttttggattgactttttctctttttaaaattaccctcaactttcaatacaaattacacatataacaaataaataaga 2011922  T
Q  575 gtaaattcaaatat 588  Q
     |||||||||||||    
T  2011921 ataaattcaaatat 2011908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 28511722 - 28511754
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||||||||||    
T  28511722 atataatataaattcttatctttttgaatgaca 28511754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 28513553 - 28513521
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||||||||||    
T  28513553 atataatataaattcttatctttttgaatgaca 28513521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 546 - 598
Target Start/End: Original strand, 34659085 - 34659137
Alignment:
Q  546 caaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaaa 598  Q
    |||||| || |||||||||||||||||| ||||||||||||||| ||| ||||    
T  34659085 caaataacacatataacaaatagataagtgtaaattcaaatattgaaataaaa 34659137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 54055376 - 54055336
Alignment:
Q  15 tataacaaatataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||||| |||||||| ||||    
T  54055376 tataacaaatataatataaattcttatatttttgaacgaca 54055336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 546 - 597
Target Start/End: Original strand, 10727236 - 10727287
Alignment:
Q  546 caaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaa 597  Q
    |||||| ||||| ||||||||| ||||||||||||| ||||||| |||||||    
T  10727236 caaataacatatgtaacaaatatataagagtaaatttaaatattaaaacaaa 10727287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 546 - 597
Target Start/End: Original strand, 10941005 - 10941056
Alignment:
Q  546 caaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaa 597  Q
    |||||| ||||| ||||||||| ||||||||||||| ||||||| |||||||    
T  10941005 caaataacatatgtaacaaatatataagagtaaatttaaatattaaaacaaa 10941056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 539 - 598
Target Start/End: Original strand, 43317444 - 43317503
Alignment:
Q  539 ttcaattcaaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaaa 598  Q
    |||||| |||||| || || |||||||||||||||| |||||| ||||||| ||||||||    
T  43317444 ttcaatacaaataacacatgtaacaaatagataagaataaatttaaatattaaaacaaaa 43317503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 55
Target Start/End: Original strand, 52635955 - 52635990
Alignment:
Q  20 caaatataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||| |||||||||||||    
T  52635955 caaatataatataaattcttatatttttgaatgaca 52635990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 21 - 55
Target Start/End: Complemental strand, 1237575 - 1237541
Alignment:
Q  21 aaatataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||||| |||||||    
T  1237575 aaatataatataaattcttatcttttttaatgaca 1237541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 17 - 47
Target Start/End: Complemental strand, 22160426 - 22160396
Alignment:
Q  17 taacaaatataatataaattcttatcttttt 47  Q
    |||||||||||||||||||||||||||||||    
T  22160426 taacaaatataatataaattcttatcttttt 22160396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 539 - 589
Target Start/End: Complemental strand, 23019623 - 23019573
Alignment:
Q  539 ttcaattcaaatatcatatataacaaatagataagagtaaattcaaatatt 589  Q
    |||||| |||||| || ||||||||||||||||||| |||||| |||||||    
T  23019623 ttcaatacaaataacacatataacaaatagataagaataaatttaaatatt 23019573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 17 - 47
Target Start/End: Complemental strand, 23315975 - 23315945
Alignment:
Q  17 taacaaatataatataaattcttatcttttt 47  Q
    |||||||||||||||||||||||||||||||    
T  23315975 taacaaatataatataaattcttatcttttt 23315945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 24916091 - 24916049
Alignment:
Q  13 aatataacaaatataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||| ||||| ||||||| |||||||    
T  24916091 aatataacaaatataatataatttcttttcttttttaatgaca 24916049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 28477054 - 28477096
Alignment:
Q  13 aatataacaaatataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||||||  ||||||| ||||    
T  28477054 aatataacaaatataatataaattcttattattttgaaagaca 28477096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 539 - 589
Target Start/End: Original strand, 31135077 - 31135127
Alignment:
Q  539 ttcaattcaaatatcatatataacaaatagataagagtaaattcaaatatt 589  Q
    |||||| ||||||||| || |||||||||||||||| |||||| |||||||    
T  31135077 ttcaatacaaatatcacatgtaacaaatagataagaataaatttaaatatt 31135127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 13 - 47
Target Start/End: Original strand, 31444957 - 31444991
Alignment:
Q  13 aatataacaaatataatataaattcttatcttttt 47  Q
    ||||||||||||||||||||||||||||| |||||    
T  31444957 aatataacaaatataatataaattcttatattttt 31444991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 13 - 47
Target Start/End: Original strand, 33997722 - 33997756
Alignment:
Q  13 aatataacaaatataatataaattcttatcttttt 47  Q
    ||||||||||||||||||||||||||||| |||||    
T  33997722 aatataacaaatataatataaattcttattttttt 33997756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 539 - 597
Target Start/End: Complemental strand, 37143566 - 37143508
Alignment:
Q  539 ttcaattcaaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaa 597  Q
    |||||| |||||| || || |||||||||||||||| |||||| ||||||| |||||||    
T  37143566 ttcaatacaaataacacatgtaacaaatagataagaataaatttaaatattaaaacaaa 37143508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 13 - 47
Target Start/End: Original strand, 38490897 - 38490931
Alignment:
Q  13 aatataacaaatataatataaattcttatcttttt 47  Q
    |||||||||||||||||| ||||||||||||||||    
T  38490897 aatataacaaatataatacaaattcttatcttttt 38490931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 539 - 589
Target Start/End: Complemental strand, 40314862 - 40314812
Alignment:
Q  539 ttcaattcaaatatcatatataacaaatagataagagtaaattcaaatatt 589  Q
    |||||| |||||| || ||||||||||||||||||| |||||| |||||||    
T  40314862 ttcaatacaaataacacatataacaaatagataagaataaatttaaatatt 40314812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 539 - 589
Target Start/End: Complemental strand, 40324938 - 40324888
Alignment:
Q  539 ttcaattcaaatatcatatataacaaatagataagagtaaattcaaatatt 589  Q
    |||||| |||||| || ||||||||||||||||||| |||||| |||||||    
T  40324938 ttcaatacaaataacacatataacaaatagataagaataaatttaaatatt 40324888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 13 - 47
Target Start/End: Complemental strand, 48458113 - 48458079
Alignment:
Q  13 aatataacaaatataatataaattcttatcttttt 47  Q
    |||||||||||||||||||||| ||||||||||||    
T  48458113 aatataacaaatataatataaagtcttatcttttt 48458079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 55
Target Start/End: Original strand, 20681020 - 20681053
Alignment:
Q  22 aatataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||| |||||||    
T  20681020 aatataatataaattcttatctttttaaatgaca 20681053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 55
Target Start/End: Original strand, 23628113 - 23628146
Alignment:
Q  22 aatataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||| |||||||    
T  23628113 aatataatataaattcttatctttttaaatgaca 23628146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 55
Target Start/End: Original strand, 25881839 - 25881868
Alignment:
Q  26 taatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||||||||    
T  25881839 taatataaattcttatctttttgaatgaca 25881868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 55
Target Start/End: Original strand, 27746684 - 27746717
Alignment:
Q  22 aatataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||| |||||||    
T  27746684 aatataatataaattcttatctttttcaatgaca 27746717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 55
Target Start/End: Complemental strand, 35519470 - 35519437
Alignment:
Q  22 aatataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||| ||||||||||||||||||||    
T  35519470 aatataatataaaatcttatctttttgaatgaca 35519437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 46
Target Start/End: Original strand, 45637842 - 45637875
Alignment:
Q  13 aatataacaaatataatataaattcttatctttt 46  Q
    ||||||||||||||||||||||||||||| ||||    
T  45637842 aatataacaaatataatataaattcttatatttt 45637875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 742988 - 742956
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||||| ||||    
T  742988 atataatataaattcttatctttttgaaagaca 742956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 21 - 53
Target Start/End: Complemental strand, 4088120 - 4088088
Alignment:
Q  21 aaatataatataaattcttatctttttgaatga 53  Q
    ||||||||||||||||||||| |||||||||||    
T  4088120 aaatataatataaattcttatgtttttgaatga 4088088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 6028628 - 6028660
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  6028628 atataatataaattcttatcttttttaatgaca 6028660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 8151027 - 8151059
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  8151027 atataatataaattcttatctttttaaatgaca 8151059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 9097988 - 9097956
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||||| ||||    
T  9097988 atataatataaattcttatctttttgaaagaca 9097956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 10262492 - 10262460
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||||| ||||    
T  10262492 atataatataaattcttatctttttgaaagaca 10262460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 11180730 - 11180762
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  11180730 atataatataaattcttatctttttaaatgaca 11180762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 13860144 - 13860176
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  13860144 atataatataaattcttatcttttttaatgaca 13860176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 15518427 - 15518459
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||||| ||||    
T  15518427 atataatataaattcttatctttttgaaagaca 15518459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 17976270 - 17976302
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  17976270 atataatataaattcttatctttttaaatgaca 17976302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 22 - 50
Target Start/End: Original strand, 19587493 - 19587521
Alignment:
Q  22 aatataatataaattcttatctttttgaa 50  Q
    |||||||||||||||||||||||||||||    
T  19587493 aatataatataaattcttatctttttgaa 19587521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 21561963 - 21561995
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||||| ||||    
T  21561963 atataatataaattcttatctttttgaaagaca 21561995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 24080563 - 24080531
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||||| ||||    
T  24080563 atataatataaattcttatctttttgaaagaca 24080531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 26097902 - 26097870
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  26097902 atataatataaattcttatctttttaaatgaca 26097870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 26877684 - 26877724
Alignment:
Q  16 ataacaaatataatataaattcttatctttttgaatgacaa 56  Q
    |||| ||||||||||||||||||||||||| ||||| ||||    
T  26877684 ataataaatataatataaattcttatctttgtgaataacaa 26877724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 28361744 - 28361712
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  28361744 atataatataaattcttatctttttaaatgaca 28361712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 31106202 - 31106162
Alignment:
Q  13 aatataacaaatataatataaattcttatctttttgaatga 53  Q
    ||||||||||| ||||| | |||||||||||||||||||||    
T  31106202 aatataacaaaaataatttcaattcttatctttttgaatga 31106162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 32137868 - 32137900
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||| |||||||||||||||||||||    
T  32137868 atataatataacttcttatctttttgaatgaca 32137900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 32201205 - 32201173
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||||| |||||    
T  32201205 atataatataaattcttatctttttgactgaca 32201173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 546 - 598
Target Start/End: Original strand, 34334770 - 34334822
Alignment:
Q  546 caaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaaa 598  Q
    |||||| || |||||| |||||||||| |||||||||||||||| ||| ||||    
T  34334770 caaataacaaatataataaatagataaaagtaaattcaaatattaaaataaaa 34334822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 34664673 - 34664705
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  34664673 atataatataaattcttatctttttaaatgaca 34664705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 39651558 - 39651590
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  39651558 atataatataaattcttatctttttaaatgaca 39651590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 39657536 - 39657568
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  39657536 atataatataaattcttatctttttaaatgaca 39657568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 40664852 - 40664884
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||||| |||||    
T  40664852 atataatataaattcttatctttttgactgaca 40664884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 41986772 - 41986740
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||||| ||||    
T  41986772 atataatataaattcttatctttttgaaagaca 41986740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 43329484 - 43329516
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||||| ||||    
T  43329484 atataatataaattcttatctttttgaaagaca 43329516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 44670509 - 44670477
Alignment:
Q  14 atataacaaatataatataaattcttatctttt 46  Q
    |||||||||||||||||||||||||||| ||||    
T  44670509 atataacaaatataatataaattcttatttttt 44670477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 44856036 - 44856004
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||| |||||||||||||||||||||||    
T  44856036 atataatatgaattcttatctttttgaatgaca 44856004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 46046046 - 46046014
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  46046046 atataatataaattcttatctttttaaatgaca 46046014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 51153306 - 51153338
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  51153306 atataatataaattcttatctttttaaatgaca 51153338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 51187486 - 51187518
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  51187486 atataatataaattcttatctttttaaatgaca 51187518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 51449550 - 51449582
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||||| ||||    
T  51449550 atataatataaattcttatctttttgaaagaca 51449582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 101; Significance: 1e-49; HSPs: 64)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 94 - 346
Target Start/End: Complemental strand, 43219540 - 43219288
Alignment:
Q  94 gaacctgattctcttgtctctcgtatttacaaggctcggtattttccttcctgtaactacttgacggaaaatttaggtcacaatcctagctatgaatcga 193  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||   ||  |||||||||   ||||| |||||||||||||||||||  | ||    
T  43219540 gaacctgattctcttgtctctcgcatttacaaggctcgatattttccttctcatagttacttgacgactaatttgggtcacaatcctagctatgcctgga 43219441  T
Q  194 gaagtattttaaaggcgtgcttcatagtgcaccatgggtcgcatttgtgtattggtattagtcactctatatctatacttgatgagtcattgttgttgaa 293  Q
    |||||||||| |||||| | |||||||||| |  |||| ||| || |||||||||||   ||||||||||||| |||||||||||  | | |||||||||    
T  43219440 gaagtattttgaaggcgcgtttcatagtgcgcggtggggcgcgttggtgtattggtacgggtcactctatatcaatacttgatgaaccttggttgttgaa 43219341  T
Q  294 tggggaccgcatagacggaaatagtgtggggaaaaactttgtgagggattttt 346  Q
    |||||||||||| || ||||||| | ||||   ||||||||||||||||||||    
T  43219340 tggggaccgcattgatggaaatattatgggtgcaaactttgtgagggattttt 43219288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 509 - 648
Target Start/End: Original strand, 9187361 - 9187499
Alignment:
Q  509 ctttttctccttcgaaaatcatcatcatcattcaattcaaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaaatgtatcctat 608  Q
    ||||||||| ||| ||||||| ||||| |||||||| |||||| ||||||||||||||||||||  ||||||||||||||| ||| |||||||| |  |     
T  9187361 ctttttctcattccaaaatcaccatcaacattcaatacaaataacatatataacaaatagataaaggtaaattcaaatattaaaataaaatgtaacaaac 9187460  T
Q  609 tttatatgtctgaatttttcattatcatttaaaaaagata 648  Q
    | |||||||| | |||||| ||||||||||||||||||||    
T  9187461 tgtatatgtccg-attttttattatcatttaaaaaagata 9187499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 539 - 648
Target Start/End: Original strand, 9788558 - 9788667
Alignment:
Q  539 ttcaattcaaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaaatgtatcctattttatatgtctgaatttttcattatcattt 638  Q
    |||||| ||||||  | ||||||||||||||||| |||||||||||||| | |||||||||||| |  ||| |||||| |||| |||||| |||||||||    
T  9788558 ttcaatgcaaataggaaatataacaaatagataatagtaaattcaaataataaaacaaaatgtaacaaattgtatatgcctgattttttctttatcattt 9788657  T
Q  639 aaaaaagata 648  Q
    ||||||||||    
T  9788658 aaaaaagata 9788667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 556 - 648
Target Start/End: Complemental strand, 24412048 - 24411956
Alignment:
Q  556 atataacaaatagataagagtaaattcaaatattcaaacaaaatgtatcctattttatatgtctgaatttttcattatcatttaaaaaagata 648  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||    ||| |||| ||  || |||||  |||||||||||||||||||    
T  24412048 atataacaaatagataagggtaaattcaaatattaaaacaaaatgtaataaattgtataagttcgatttttttcttatcatttaaaaaagata 24411956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 4438609 - 4438566
Alignment:
Q  10 aagaatataacaaatataatataaattcttatctttttgaatga 53  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  4438609 aagaatataacaaatataatataaattcttatcttttttaatga 4438566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 539 - 598
Target Start/End: Complemental strand, 11929869 - 11929810
Alignment:
Q  539 ttcaattcaaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaaa 598  Q
    |||||| |||||| || |||||||||||||||||||||||||||||||||| ||| ||||    
T  11929869 ttcaatacaaataacacatataacaaatagataagagtaaattcaaatattaaaataaaa 11929810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 539 - 598
Target Start/End: Original strand, 11941424 - 11941483
Alignment:
Q  539 ttcaattcaaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaaa 598  Q
    |||||| |||||| || |||||||||||||||||||||||||||||||||| ||| ||||    
T  11941424 ttcaatacaaataacacatataacaaatagataagagtaaattcaaatattaaaataaaa 11941483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 475 - 598
Target Start/End: Complemental strand, 13369459 - 13369336
Alignment:
Q  475 aagaaaataacatcttttgattcttttgaactgtctttttctccttcgaaaatcatcatcatcattcaattcaaatatcatatataacaaatagataaga 574  Q
    ||||||||||||| |||||  |||||||| ||  ||||||||| ||  ||||| | | ||| | |||||| |||||| || |||||| ||||||||||||    
T  13369459 aagaaaataacatgttttggctcttttgagcttactttttctcttttcaaaattaccctcaactttcaatacaaataacacatataataaatagataaga 13369360  T
Q  575 gtaaattcaaatattcaaacaaaa 598  Q
    ||| ||||||||||| ||| ||||    
T  13369359 gtacattcaaatattaaaataaaa 13369336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 13 - 50
Target Start/End: Original strand, 11420416 - 11420453
Alignment:
Q  13 aatataacaaatataatataaattcttatctttttgaa 50  Q
    ||||||||||||||||||||||||||||||||||||||    
T  11420416 aatataacaaatataatataaattcttatctttttgaa 11420453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 539 - 598
Target Start/End: Complemental strand, 15044532 - 15044473
Alignment:
Q  539 ttcaattcaaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaaa 598  Q
    |||||| |||||| || ||||||||||||||||||| |||||||||||||| ||| ||||    
T  15044532 ttcaatacaaataacacatataacaaatagataagattaaattcaaatattaaaataaaa 15044473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 3501388 - 3501430
Alignment:
Q  13 aatataacaaatataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||| |||||||| ||||||||||||    
T  3501388 aatataacaaatataatataagttcttatcattttgaatgaca 3501430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 31261300 - 31261342
Alignment:
Q  13 aatataacaaatataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||| ||||||||||||| |||||||    
T  31261300 aatataacaaatataatataatttcttatcttttttaatgaca 31261342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 34882358 - 34882316
Alignment:
Q  13 aatataacaaatataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||| ||||| ||||||||||||    
T  34882358 aatataacaaatataatataaattattatcattttgaatgaca 34882316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 51
Target Start/End: Original strand, 10794644 - 10794681
Alignment:
Q  14 atataacaaatataatataaattcttatctttttgaat 51  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  10794644 atataacaaatataacataaattcttatctttttgaat 10794681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 1351749 - 1351706
Alignment:
Q  13 aatataacaaatataatataaatt-cttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||| ||||| |||||||||||||    
T  1351749 aatataacaaatataatataaattccttatatttttgaatgaca 1351706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 547 - 598
Target Start/End: Original strand, 4535793 - 4535844
Alignment:
Q  547 aaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaaa 598  Q
    ||||| || |||||| ||||||||||||||||||||||||||| ||| ||||    
T  4535793 aaataacacatataataaatagataagagtaaattcaaatattaaaataaaa 4535844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 539 - 602
Target Start/End: Complemental strand, 31268097 - 31268034
Alignment:
Q  539 ttcaattcaaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaaatgta 602  Q
    |||||| ||| || ||||||||| ||||| || | |||||||||||||||| ||||||||||||    
T  31268097 ttcaatacaagtagcatatataagaaataaattaaagtaaattcaaatattaaaacaaaatgta 31268034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 547 - 598
Target Start/End: Original strand, 42862472 - 42862523
Alignment:
Q  547 aaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaaa 598  Q
    ||||| || |||||||||||| ||||||||||||||||||||| ||| ||||    
T  42862472 aaataacacatataacaaataaataagagtaaattcaaatattaaaataaaa 42862523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 1284228 - 1284186
Alignment:
Q  13 aatataacaaatataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||| |||||||  |||||||||||||||||    
T  1284228 aatataacaaatataacataaatttgtatctttttgaatgaca 1284186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 17 - 47
Target Start/End: Complemental strand, 1657978 - 1657948
Alignment:
Q  17 taacaaatataatataaattcttatcttttt 47  Q
    |||||||||||||||||||||||||||||||    
T  1657978 taacaaatataatataaattcttatcttttt 1657948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 539 - 597
Target Start/End: Complemental strand, 1759796 - 1759738
Alignment:
Q  539 ttcaattcaaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaa 597  Q
    |||||| ||||||  | ||||||||||||||||||| |||||| ||||||| |||||||    
T  1759796 ttcaatacaaataataaatataacaaatagataagaataaatttaaatattaaaacaaa 1759738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 13 - 47
Target Start/End: Complemental strand, 2442317 - 2442283
Alignment:
Q  13 aatataacaaatataatataaattcttatcttttt 47  Q
    |||||||||||||||||||||||| ||||||||||    
T  2442317 aatataacaaatataatataaatttttatcttttt 2442283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 17 - 47
Target Start/End: Complemental strand, 6335925 - 6335895
Alignment:
Q  17 taacaaatataatataaattcttatcttttt 47  Q
    |||||||||||||||||||||||||||||||    
T  6335925 taacaaatataatataaattcttatcttttt 6335895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 12261735 - 12261693
Alignment:
Q  13 aatataacaaatataatataaattcttatctttttgaatgaca 55  Q
    ||||||| | ||||||||||||||||||||||||| |||||||    
T  12261735 aatataatatatataatataaattcttatctttttaaatgaca 12261693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 13 - 47
Target Start/End: Complemental strand, 15920134 - 15920100
Alignment:
Q  13 aatataacaaatataatataaattcttatcttttt 47  Q
    |||||||||||||||||| ||||||||||||||||    
T  15920134 aatataacaaatataataaaaattcttatcttttt 15920100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 539 - 597
Target Start/End: Complemental strand, 16822980 - 16822922
Alignment:
Q  539 ttcaattcaaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaa 597  Q
    |||||| |||||| || || |||||||||||||||| |||||| ||||||| |||||||    
T  16822980 ttcaatacaaataacacatgtaacaaatagataagaataaatttaaatattaaaacaaa 16822922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 539 - 597
Target Start/End: Complemental strand, 28969885 - 28969827
Alignment:
Q  539 ttcaattcaaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaa 597  Q
    |||||| |||||| || ||||||||||||||||||| ||| || ||||||| |||||||    
T  28969885 ttcaatacaaataacacatataacaaatagataagaataagtttaaatattaaaacaaa 28969827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 21 - 55
Target Start/End: Complemental strand, 34151177 - 34151143
Alignment:
Q  21 aaatataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||||| |||||||    
T  34151177 aaatataatataaattcttatctttttaaatgaca 34151143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 13 - 47
Target Start/End: Complemental strand, 39131833 - 39131799
Alignment:
Q  13 aatataacaaatataatataaattcttatcttttt 47  Q
    |||||||||||||||||||| ||||||||||||||    
T  39131833 aatataacaaatataatatatattcttatcttttt 39131799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 55
Target Start/End: Complemental strand, 38137970 - 38137937
Alignment:
Q  22 aatataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||| |||||||    
T  38137970 aatataatataaattcttatctttttaaatgaca 38137937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 41372546 - 41372505
Alignment:
Q  13 aatataacaaatataatataaattcttatctttttgaatgac 54  Q
    ||||||||| ||||||||||||||||||| ||||| ||||||    
T  41372546 aatataacagatataatataaattcttattttttttaatgac 41372505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 170445 - 170413
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||||| |||||    
T  170445 atataatataaattcttatctttttgattgaca 170413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 2185106 - 2185074
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||||| |||||    
T  2185106 atataatataaattcttatctttttgactgaca 2185074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 3541251 - 3541211
Alignment:
Q  15 tataacaaatataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||| ||  |||||||||||||||||||||    
T  3541251 tataacaaatataatttattttcttatctttttgaatgaca 3541211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 4437487 - 4437527
Alignment:
Q  13 aatataacaaatataatataaattcttatctttttgaatga 53  Q
    |||||| |||||||||||||||||||||| ||||| |||||    
T  4437487 aatatagcaaatataatataaattcttatattttttaatga 4437527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 6303155 - 6303123
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||||| ||||    
T  6303155 atataatataaattcttatctttttgaaagaca 6303123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 6746981 - 6747013
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  6746981 atataatataaattcttatctttttaaatgaca 6747013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 6815381 - 6815413
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||||| |||||    
T  6815381 atataatataaattcttatctttttgactgaca 6815413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 11579015 - 11579047
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  11579015 atataatataaattcttatctttttaaatgaca 11579047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 11924119 - 11924151
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||||| |||||    
T  11924119 atataatataaattcttatctttttgactgaca 11924151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 546 - 586
Target Start/End: Complemental strand, 13575788 - 13575748
Alignment:
Q  546 caaatatcatatataacaaatagataagagtaaattcaaat 586  Q
    |||||| |||||||||||| || ||||||||||||||||||    
T  13575788 caaataacatatataacaagtatataagagtaaattcaaat 13575748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 546 - 602
Target Start/End: Original strand, 16243549 - 16243605
Alignment:
Q  546 caaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaaatgta 602  Q
    |||||| || || ||| ||||||||||||||||||||||||||| ||| ||| ||||    
T  16243549 caaataacacatgtaaaaaatagataagagtaaattcaaatattaaaataaagtgta 16243605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 17950063 - 17950023
Alignment:
Q  13 aatataacaaatataatataaattcttatctttttgaatga 53  Q
    ||||||||||||||||||||||| ||||| ||||| |||||    
T  17950063 aatataacaaatataatataaatccttattttttttaatga 17950023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 20666086 - 20666054
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||||| ||||    
T  20666086 atataatataaattcttatctttttgaaagaca 20666054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 558 - 598
Target Start/End: Original strand, 23085788 - 23085828
Alignment:
Q  558 ataacaaatagataagagtaaattcaaatattcaaacaaaa 598  Q
    ||||||||||||||||||| |||||||||||| ||| ||||    
T  23085788 ataacaaatagataagagtcaattcaaatattaaaataaaa 23085828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 23969071 - 23969039
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||||| ||||    
T  23969071 atataatataaattcttatctttttgaaagaca 23969039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 27914370 - 27914338
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||| |||||||||||||||||||||||    
T  27914370 atataatatgaattcttatctttttgaatgaca 27914338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 27960789 - 27960757
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||| |||||||||||||||||||||||    
T  27960789 atataatatgaattcttatctttttgaatgaca 27960757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 29767350 - 29767390
Alignment:
Q  13 aatataacaaatataatataaattcttatctttttgaatga 53  Q
    ||||||||||||||| ||||||||  |||||||||||||||    
T  29767350 aatataacaaatatagtataaatttgtatctttttgaatga 29767390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 30551448 - 30551416
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||||| ||||    
T  30551448 atataatataaattcttatctttttgaaagaca 30551416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 33848940 - 33848908
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  33848940 atataatataaattcttatctttttaaatgaca 33848908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 36059528 - 36059496
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  36059528 atataatataaattcttatctttttaaatgaca 36059496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 37027304 - 37027336
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||||| ||||    
T  37027304 atataatataaattcttatctttttgaaagaca 37027336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 37034646 - 37034678
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  37034646 atataatataaattcttatctttttaaatgaca 37034678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 38139135 - 38139167
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  38139135 atataatataaattcttatctttttaaatgaca 38139167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 38909109 - 38909141
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  38909109 atataatataaattcttatctttttaaatgaca 38909141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 39486280 - 39486248
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  39486280 atataatataaattcttatctttttaaatgaca 39486248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 39525275 - 39525307
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  39525275 atataatataaattcttatctttttaaatgaca 39525307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 40048921 - 40048889
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  40048921 atataatataaattcttatctttttaaatgaca 40048889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 41526137 - 41526169
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  41526137 atataatataaattcttatctttttaaatgaca 41526169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 42063345 - 42063313
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||||| ||||    
T  42063345 atataatataaattcttatctttttgaaagaca 42063313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 44216198 - 44216166
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||||| ||||    
T  44216198 atataatataaattcttatctttttgaaagaca 44216166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 44937878 - 44937910
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||||| ||||    
T  44937878 atataatataaattcttatctttttgaaagaca 44937910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 45139301 - 45139269
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  45139301 atataatataaattcttatctttttaaatgaca 45139269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 75; Significance: 3e-34; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 95 - 349
Target Start/End: Original strand, 33194 - 33448
Alignment:
Q  95 aacctgattctcttgtctctcgtatttacaaggctcggtattttccttcctgtaactacttgacggaaaatttaggtcacaatcctagctatgaatcgag 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||   ||  ||||||||   ||||||||||||| ||||||| |||| || ||     
T  33194 aacctgattctcttgtctctcgtatttacaaggctcggtattttccttctcttagttacttgacaacaaatttaggtcacgatcctagttatgtatggat 33293  T
Q  195 aagtattttaaaggcgtgcttcatagtgcaccatgggtcgcatttgtgtattggtattagtcactctatatctatacttgatgagtcattgttgttgaat 294  Q
    ||||||||| ||| || |||||||||| | |  |||| ||| || |||| |||||||  |||||  |||||| ||| |||||||| |||  |||||||||    
T  33294 aagtattttgaagtcgggcttcatagtacgcggtggggcgcgttggtgtgttggtataggtcacagtatatcaatatttgatgagccatgcttgttgaat 33393  T
Q  295 ggggaccgcatagacggaaatagtgtggggaaaaactttgtgagggatttttcta 349  Q
    ||||| || || | | || ||| |||||||  | ||||||||||  |||||||||    
T  33394 ggggatcgtatggtcagacatattgtgggggcacactttgtgagatatttttcta 33448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 95 - 297
Target Start/End: Complemental strand, 17799 - 17597
Alignment:
Q  95 aacctgattctcttgtctctcgtatttacaaggctcggtattttccttcctgtaactacttgacggaaaatttaggtcacaatcctagctatgaatcgag 194  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||  |||  ||||||||   ||||||||||||| ||||||| |||| || ||     
T  17799 aacctgattctcttgtctctcgtatttacaaggcttggtattttccttctcgtagttacttgacaacaaatttaggtcacgatcctagttatgtatggat 17700  T
Q  195 aagtattttaaaggcgtgcttcatagtgcaccatgggtcgcatttgtgtattggtattagtcactctatatctatacttgatgagtcattgttgttgaat 294  Q
    ||||||||| ||| || |||||||||| | |  |||| ||| || |||| ||||||   |||||  |||||| ||| |||||||| ||| ||||| ||||    
T  17699 aagtattttgaagtcgcgcttcatagtacgcggtggggcgcgttggtgtgttggtacaggtcacattatatcaatatttgatgagccatggttgtcgaat 17600  T
Q  295 ggg 297  Q
    |||    
T  17599 ggg 17597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 2e-29; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 85 - 203
Target Start/End: Original strand, 16042671 - 16042789
Alignment:
Q  85 tttcagattgaacctgattctcttgtctctcgtatttacaaggctcggtattttccttcctgtaactacttgacggaaaatttaggtcacaatcctagct 184  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||| || |  |||||||| | ||||| ||||||||||| |||||    
T  16042671 tttcagatagaacctgattctcttatctctcgtatttacaaggctcgatattttccttcatgaaggtacttgacagcaaattgaggtcacaatcttagct 16042770  T
Q  185 atgaatcgagaagtatttt 203  Q
    ||| || ||||||||||||    
T  16042771 atgtatggagaagtatttt 16042789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 110 - 345
Target Start/End: Original strand, 15616828 - 15617063
Alignment:
Q  110 tctctcgtatttacaaggctcggtattttccttcctgtaactacttgacggaaaatttaggtcacaatcctagctatgaatcgagaagtattttaaaggc 209  Q
    |||||||||||||||| ||  |||| ||||||||| |||  |||||||||   ||| ||||||  || |||||||||| |  |||||||||||| ||||     
T  15616828 tctctcgtatttacaatgcgtggtactttccttcccgtagttacttgacgttgaatctaggtcgtaaacctagctatgtaatgagaagtattttgaaggt 15616927  T
Q  210 gtgcttcatagtgcaccatgggtcgcatttgtgtattggtattagtcactctatatctatacttgatgagtcattgttgttgaatggggaccgcatagac 309  Q
     ||||||||||||||| |  || |||||| ||||||  |||   |||||||||||||||||||||||||  ||| |||  |||||| |||   ||||||     
T  15616928 ttgcttcatagtgcacaacagggcgcattggtgtatcagtacgggtcactctatatctatacttgatgaaccatggttagtgaatgaggatgacatagat 15617027  T
Q  310 ggaaatagtgtggggaaaaactttgtgagggatttt 345  Q
    ||||||| |||||||  |||||||||||||||||||    
T  15617028 ggaaatattgtgggggtaaactttgtgagggatttt 15617063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 14001117 - 14001159
Alignment:
Q  13 aatataacaaatataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  14001117 aatataacaaatataatataaattcttatctttttgaatgaca 14001159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 29686221 - 29686263
Alignment:
Q  13 aatataacaaatataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  29686221 aatataacaaatataatataaattcttatctttttgaatgaca 29686263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 510 - 648
Target Start/End: Complemental strand, 30841383 - 30841247
Alignment:
Q  510 tttttctccttcgaaaatcatcatcatcattcaattcaaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaaatgtatcctatt 609  Q
    |||||||||||| ||||| | | ||| | ||||||  |||||  | ||||||||||||| |||||||||||| ||||||| |||||||||||| |  |||    
T  30841383 tttttctccttctaaaattaccctcaactttcaataaaaataaaacatataacaaatag-taagagtaaatttaaatattaaaacaaaatgtaacaaatt 30841285  T
Q  610 ttatatgtctgaatttttcattatcatttaaaaaagata 648  Q
     |||||||||| ||||||  ||| |||||||||||||||    
T  30841284 gtatatgtctg-atttttttttaccatttaaaaaagata 30841247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 487 - 602
Target Start/End: Complemental strand, 38099114 - 38098999
Alignment:
Q  487 tcttttgattcttttgaactgtctttttctccttcgaaaatcatcatcatcattcaattcaaatatcatatataacaaatagataagagtaaattcaaat 586  Q
    |||||||||||||||| | || ||||||||||||  | ||| | | ||| | |||||| |||||  || |||| | ||||||||||||||||||||||||    
T  38099114 tcttttgattcttttggattgactttttctcctttcagaattaccctcaactttcaatgcaaatcacacatatgataaatagataagagtaaattcaaat 38099015  T
Q  587 attcaaacaaaatgta 602  Q
    ||| ||| ||||||||    
T  38099014 attaaaataaaatgta 38098999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 833934 - 833892
Alignment:
Q  13 aatataacaaatataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  833934 aatataacaaatataatctaaattcttatctttttgaatgaca 833892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 539 - 597
Target Start/End: Complemental strand, 19289048 - 19288990
Alignment:
Q  539 ttcaattcaaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaa 597  Q
    |||||| |||||| |||||||||||||||||||||| |||||| ||||||| |||||||    
T  19289048 ttcaatacaaataacatatataacaaatagataagaataaatttaaatattaaaacaaa 19288990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 539 - 602
Target Start/End: Complemental strand, 35583444 - 35583381
Alignment:
Q  539 ttcaattcaaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaaatgta 602  Q
    |||||| |||||| || |||||||||| |||||||| ||||||||||||||  |||||||||||    
T  35583444 ttcaatacaaataacacatataacaaaaagataagattaaattcaaatattataacaaaatgta 35583381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 546 - 588
Target Start/End: Original strand, 16312817 - 16312859
Alignment:
Q  546 caaatatcatatataacaaatagataagagtaaattcaaatat 588  Q
    |||||| |||||||||||||||||||| |||||||||||||||    
T  16312817 caaataacatatataacaaatagataaaagtaaattcaaatat 16312859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 37516885 - 37516927
Alignment:
Q  13 aatataacaaatataatataaattcttatctttttgaatgaca 55  Q
    |||||| |||||||||||||||||||||| |||||||||||||    
T  37516885 aatatatcaaatataatataaattcttatatttttgaatgaca 37516927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 50
Target Start/End: Complemental strand, 40715845 - 40715808
Alignment:
Q  13 aatataacaaatataatataaattcttatctttttgaa 50  Q
    |||||||||||||| |||||||||||||||||||||||    
T  40715845 aatataacaaatatgatataaattcttatctttttgaa 40715808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 1539369 - 1539329
Alignment:
Q  13 aatataacaaatataatataaattcttatctttttgaatga 53  Q
    ||||||| ||||||||||||| |||||||||||||||||||    
T  1539369 aatataaaaaatataatataatttcttatctttttgaatga 1539329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 546 - 598
Target Start/End: Original strand, 28400189 - 28400241
Alignment:
Q  546 caaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaaa 598  Q
    |||||| ||||||||||| |||||||| |||||||||||||||| ||| ||||    
T  28400189 caaataacatatataacatatagataaaagtaaattcaaatattaaaaaaaaa 28400241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 29632750 - 29632710
Alignment:
Q  15 tataacaaatataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||| ||||||||||||||||||||| |||||||    
T  29632750 tataacaaataaaatataaattcttatctttttaaatgaca 29632710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 33322290 - 33322250
Alignment:
Q  13 aatataacaaatataatataaattcttatctttttgaatga 53  Q
    ||||||||||||||||||||||||||||  |||||||||||    
T  33322290 aatataacaaatataatataaattcttaattttttgaatga 33322250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 539 - 598
Target Start/End: Complemental strand, 1612228 - 1612169
Alignment:
Q  539 ttcaattcaaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaaa 598  Q
    |||||| |||||| || |||||||||||||| |||| |||||||||||||| ||| ||||    
T  1612228 ttcaatacaaataacacatataacaaatagacaagattaaattcaaatattaaaataaaa 1612169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 539 - 598
Target Start/End: Original strand, 8839665 - 8839724
Alignment:
Q  539 ttcaattcaaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaaa 598  Q
    |||||| |||||| || || ||||||||||||||||||||||| ||||||| ||| ||||    
T  8839665 ttcaatacaaataacacatgtaacaaatagataagagtaaatttaaatattaaaataaaa 8839724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 547 - 598
Target Start/End: Original strand, 25536460 - 25536511
Alignment:
Q  547 aaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaaa 598  Q
    ||||| || |||||||||||| |||||| |||||||||||||| ||||||||    
T  25536460 aaataacacatataacaaataaataagaataaattcaaatattaaaacaaaa 25536511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 546 - 600
Target Start/End: Original strand, 1093642 - 1093696
Alignment:
Q  546 caaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaaatg 600  Q
    |||||| || |||||||||||||||| ||||||||| ||||||| ||| ||||||    
T  1093642 caaataacacatataacaaatagatatgagtaaatttaaatattaaaataaaatg 1093696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 15 - 53
Target Start/End: Original strand, 5730312 - 5730350
Alignment:
Q  15 tataacaaatataatataaattcttatctttttgaatga 53  Q
    ||||| ||||||||||||||||||||||||||| |||||    
T  5730312 tataataaatataatataaattcttatcttttttaatga 5730350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 539 - 597
Target Start/End: Complemental strand, 7464339 - 7464281
Alignment:
Q  539 ttcaattcaaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaa 597  Q
    |||||| |||||| || || |||||||||||||||| |||||| ||||||| |||||||    
T  7464339 ttcaatacaaataacacatgtaacaaatagataagaataaatttaaatattaaaacaaa 7464281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 21 - 55
Target Start/End: Original strand, 14205324 - 14205358
Alignment:
Q  21 aaatataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||||| |||||||    
T  14205324 aaatataatataaattcttatctttttaaatgaca 14205358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 19565090 - 19565132
Alignment:
Q  13 aatataacaaatataatataaattcttatctttttgaatgaca 55  Q
    ||||||| |||||| ||||||||| ||||||||||||||||||    
T  19565090 aatataataaatatgatataaatttttatctttttgaatgaca 19565132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 13 - 47
Target Start/End: Original strand, 23085337 - 23085371
Alignment:
Q  13 aatataacaaatataatataaattcttatcttttt 47  Q
    ||||||||||||||||||||||||||||| |||||    
T  23085337 aatataacaaatataatataaattcttattttttt 23085371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 539 - 589
Target Start/End: Original strand, 27174996 - 27175046
Alignment:
Q  539 ttcaattcaaatatcatatataacaaatagataagagtaaattcaaatatt 589  Q
    |||||| |||||| || ||||||||||||||||| |||||||| |||||||    
T  27174996 ttcaatacaaatagcacatataacaaatagataaaagtaaatttaaatatt 27175046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 29663474 - 29663432
Alignment:
Q  13 aatataacaaatataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||| | |||||||| |||||||    
T  29663474 aatataacaaatataatataaattataatcttttttaatgaca 29663432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 17 - 47
Target Start/End: Original strand, 31172286 - 31172316
Alignment:
Q  17 taacaaatataatataaattcttatcttttt 47  Q
    |||||||||||||||||||||||||||||||    
T  31172286 taacaaatataatataaattcttatcttttt 31172316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 31378235 - 31378193
Alignment:
Q  13 aatataacaaatataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||| |||| |||| |||||||||||||    
T  31378235 aatataacaaatataatatcaatttttatatttttgaatgaca 31378193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 13 - 47
Target Start/End: Complemental strand, 35373353 - 35373319
Alignment:
Q  13 aatataacaaatataatataaattcttatcttttt 47  Q
    |||||||||||||||||| ||||||||||||||||    
T  35373353 aatataacaaatataataaaaattcttatcttttt 35373319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 17 - 51
Target Start/End: Original strand, 35588615 - 35588649
Alignment:
Q  17 taacaaatataatataaattcttatctttttgaat 51  Q
    ||||||| |||||||||||||||||||||||||||    
T  35588615 taacaaacataatataaattcttatctttttgaat 35588649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 13 - 47
Target Start/End: Complemental strand, 37142793 - 37142759
Alignment:
Q  13 aatataacaaatataatataaattcttatcttttt 47  Q
    ||||||||||||||||||| |||||||||||||||    
T  37142793 aatataacaaatataatattaattcttatcttttt 37142759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 37516555 - 37516596
Alignment:
Q  13 aatataacaaatataatataaattcttatctttttgaatgaca 55  Q
    ||||| ||||||||||||||||||||||| |||||||||||||    
T  37516555 aatatgacaaatataatataaattcttat-tttttgaatgaca 37516596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 17 - 47
Target Start/End: Original strand, 41879793 - 41879823
Alignment:
Q  17 taacaaatataatataaattcttatcttttt 47  Q
    |||||||||||||||||||||||||||||||    
T  41879793 taacaaatataatataaattcttatcttttt 41879823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 53
Target Start/End: Complemental strand, 4460557 - 4460524
Alignment:
Q  20 caaatataatataaattcttatctttttgaatga 53  Q
    |||||||||||||| |||||||||||||||||||    
T  4460557 caaatataatataatttcttatctttttgaatga 4460524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 557 - 598
Target Start/End: Original strand, 15341479 - 15341520
Alignment:
Q  557 tataacaaatagataagagtaaattcaaatattcaaacaaaa 598  Q
    ||||||||||| ||||||||||||||||||||| ||| ||||    
T  15341479 tataacaaataaataagagtaaattcaaatattaaaaaaaaa 15341520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 55
Target Start/End: Original strand, 18282264 - 18282305
Alignment:
Q  14 atataacaaatataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||| |||| ||||| ||||||||||||||||||    
T  18282264 atataacaaatagaatacaaatttttatctttttgaatgaca 18282305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 790311 - 790279
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  790311 atataatataaattcttatctttttaaatgaca 790279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 2000920 - 2000888
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||| |||||||||||||||||||||||    
T  2000920 atataatatgaattcttatctttttgaatgaca 2000888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 2463467 - 2463499
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  2463467 atataatataaattcttatctttttaaatgaca 2463499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 3246651 - 3246683
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  3246651 atataatataaattcttatctttttaaatgaca 3246683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 10042616 - 10042648
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  10042616 atataatataaattcttatctttttaaatgaca 10042648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 549 - 589
Target Start/End: Original strand, 10542847 - 10542887
Alignment:
Q  549 atatcatatataacaaatagataagagtaaattcaaatatt 589  Q
    |||||| || |||||||||||||| ||||||||||||||||    
T  10542847 atatcacatgtaacaaatagataatagtaaattcaaatatt 10542887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 11832487 - 11832455
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  11832487 atataatataaattcttatcttttttaatgaca 11832455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 13 - 41
Target Start/End: Complemental strand, 17822414 - 17822386
Alignment:
Q  13 aatataacaaatataatataaattcttat 41  Q
    |||||||||||||||||||||||||||||    
T  17822414 aatataacaaatataatataaattcttat 17822386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 19393011 - 19393043
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||||| ||||    
T  19393011 atataatataaattcttatctttttgaaagaca 19393043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 51
Target Start/End: Complemental strand, 28400407 - 28400379
Alignment:
Q  23 atataatataaattcttatctttttgaat 51  Q
    |||||||||||||||||||||||||||||    
T  28400407 atataatataaattcttatctttttgaat 28400379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 28746570 - 28746538
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  28746570 atataatataaattcttatctttttaaatgaca 28746538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 29874918 - 29874886
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  29874918 atataatataaattcttatctttttaaatgaca 29874886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 31298225 - 31298193
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||||| ||||    
T  31298225 atataatataaattcttatctttttgaaagaca 31298193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 35380665 - 35380633
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  35380665 atataatataaattcttatctttttaaatgaca 35380633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 36515687 - 36515719
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||| |||||||||||||||||||||||    
T  36515687 atataatatgaattcttatctttttgaatgaca 36515719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 37461449 - 37461481
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||||| ||||    
T  37461449 atataatataaattcttatctttttgaaagaca 37461481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 40307683 - 40307715
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||||| |||||    
T  40307683 atataatataaattcttatctttttgactgaca 40307715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 40507052 - 40507020
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  40507052 atataatataaattcttatctttttaaatgaca 40507020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 42416527 - 42416559
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  42416527 atataatataaattcttatctttttaaatgaca 42416559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 3e-22; HSPs: 72)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 510 - 648
Target Start/End: Original strand, 22701595 - 22701732
Alignment:
Q  510 tttttctccttcgaaaatcatcatcatcattcaattcaaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaaatgtatcctatt 609  Q
    |||||||||||| ||||| | | ||| | |||| | | ||||||| |||||||||||||||||||||||||||||||||| ||| |||||||| |  |||    
T  22701595 tttttctccttccaaaattaccctcaactttcattgcgaatatcacatataacaaatagataagagtaaattcaaatattaaaataaaatgtaacaaatt 22701694  T
Q  610 ttatatgtctgaatttttcattatcatttaaaaaagata 648  Q
     ||||||||||  |||||| ||||| |||||||||||||    
T  22701695 gtatatgtctg-ttttttccttatcgtttaaaaaagata 22701732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 475 - 589
Target Start/End: Original strand, 39786299 - 39786413
Alignment:
Q  475 aagaaaataacatcttttgattcttttgaactgtctttttctccttcgaaaatcatcatcatcattcaattcaaatatcatatataacaaatagataaga 574  Q
    ||||||||| ||| || ||| |||||||  ||| ||||||||| ||| ||||  | | ||| | |||||| |||||| || |||||||||||||||||||    
T  39786299 aagaaaatagcatgttctgactcttttgggctgactttttctctttccaaaactaccctcaactttcaatacaaataacacatataacaaatagataaga 39786398  T
Q  575 gtaaattcaaatatt 589  Q
    |||||||||||||||    
T  39786399 gtaaattcaaatatt 39786413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 24650045 - 24650005
Alignment:
Q  13 aatataacaaatataatataaattcttatctttttgaatga 53  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  24650045 aatataacaaatataatataaattcttatctttttgaatga 24650005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 28069670 - 28069709
Alignment:
Q  16 ataacaaatataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  28069670 ataacaaatataatataaattcttatctttttgaatgaca 28069709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 539 - 598
Target Start/End: Original strand, 36251527 - 36251586
Alignment:
Q  539 ttcaattcaaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaaa 598  Q
    |||||| |||||| || |||||||||||||||||||||||||||||||||| ||| ||||    
T  36251527 ttcaatacaaataacacatataacaaatagataagagtaaattcaaatattaaaataaaa 36251586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 557 - 648
Target Start/End: Original strand, 48103043 - 48103134
Alignment:
Q  557 tataacaaatagataagagtaaattcaaatattcaaacaaaatgtatcctattttatatgtctgaatttttcattatcatttaaaaaagata 648  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||  |  ||| ||||| ||  | |||||| ||||||||| |||||||||    
T  48103043 tataaaaaatagataagagtaaattcaaatattaaaacaaaatgtgacaaattatatatatcctattttttccttatcattttaaaaagata 48103134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 38237480 - 38237522
Alignment:
Q  13 aatataacaaatataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  38237480 aatataacaaatataatataaattcttatctttttcaatgaca 38237522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 489 - 598
Target Start/End: Original strand, 17038279 - 17038388
Alignment:
Q  489 ttttgattcttttgaactgtctttttctccttcgaaaatcatcatcatcattcaattcaaatatcatatataacaaatagataagagtaaattcaaatat 588  Q
    ||||||||||||||  |||  |||||||| ||  ||||| |  |||| | |||||| |||||  || |||||||||||||||||||||||||||||||||    
T  17038279 ttttgattcttttgggctgaatttttctcttttcaaaattacaatcaactttcaatacaaattgcacatataacaaatagataagagtaaattcaaatat 17038378  T
Q  589 tcaaacaaaa 598  Q
    | ||| ||||    
T  17038379 taaaataaaa 17038388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 546 - 598
Target Start/End: Complemental strand, 4785698 - 4785646
Alignment:
Q  546 caaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaaa 598  Q
    |||||| || |||||| ||||||||||||||||||||||||||||||| ||||    
T  4785698 caaatagcacatataataaatagataagagtaaattcaaatattcaaataaaa 4785646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 546 - 598
Target Start/End: Complemental strand, 4818698 - 4818646
Alignment:
Q  546 caaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaaa 598  Q
    |||||| || |||||| ||||||||||||||||||||||||||||||| ||||    
T  4818698 caaatagcacatataataaatagataagagtaaattcaaatattcaaataaaa 4818646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 475 - 599
Target Start/End: Original strand, 9334466 - 9334590
Alignment:
Q  475 aagaaaataacatcttttgattcttttgaactgtctttttctccttcgaaaatcatcatcatcattcaattcaaatatcatatataacaaatagataaga 574  Q
    ||||||||||||| |||||| |||||||  ||| | ||||||| ||  ||||| | | |||   |||||| ||||||  ||||||||||||||||||| |    
T  9334466 aagaaaataacatgttttgactcttttgggctgacattttctcttttcaaaattaccctcaattttcaatacaaataatatatataacaaatagataaaa 9334565  T
Q  575 gtaaattcaaatattcaaacaaaat 599  Q
    ||| ||||||||||| ||| |||||    
T  9334566 gtagattcaaatattaaaagaaaat 9334590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 546 - 602
Target Start/End: Complemental strand, 14553732 - 14553676
Alignment:
Q  546 caaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaaatgta 602  Q
    |||||| || ||||||||||||||||| |||||||||||||||||||| | ||||||    
T  14553732 caaatagcacatataacaaatagataaaagtaaattcaaatattcaaaaataatgta 14553676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 559 - 603
Target Start/End: Complemental strand, 27484466 - 27484422
Alignment:
Q  559 taacaaatagataagagtaaattcaaatattcaaacaaaatgtat 603  Q
    |||||||||||||||| |||||||||||||| |||||||||||||    
T  27484466 taacaaatagataagattaaattcaaatattaaaacaaaatgtat 27484422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 496 - 599
Target Start/End: Complemental strand, 39465655 - 39465551
Alignment:
Q  496 tcttttgaactgtcttttt-ctccttcgaaaatcatcatcatcattcaattcaaatatcatatataacaaatagataagagtaaattcaaatattcaaac 594  Q
    |||||||||||| |||||| ||||||  ||||| | | ||| | |||||| ||||||  | ||||||||||||||||| |||||||||||||||| ||||    
T  39465655 tcttttgaactgccttttttctcctttcaaaattaccctcaactttcaatacaaataatacatataacaaatagataaaagtaaattcaaatattaaaac 39465556  T
Q  595 aaaat 599  Q
     ||||    
T  39465555 gaaat 39465551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 559 - 646
Target Start/End: Original strand, 39522800 - 39522890
Alignment:
Q  559 taacaaatagataagagtaaattcaaatattcaaacaaaatgtatcctattttatatgtctg---aatttttcattatcatttaaaaaaga 646  Q
    |||||||||||||||||||| |||||||||  |||||||||||| | |||| ||||| ||||   | |||||| || ||||||||||||||    
T  39522800 taacaaatagataagagtaatttcaaatatcaaaacaaaatgtaacatattgtatatttctgattattttttccttttcatttaaaaaaga 39522890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 547 - 602
Target Start/End: Original strand, 1460418 - 1460473
Alignment:
Q  547 aaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaaatgta 602  Q
    ||||| || |||||||||||| |||| |||||||||||||||| ||||||||||||    
T  1460418 aaataacacatataacaaatatataatagtaaattcaaatatttaaacaaaatgta 1460473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 32358927 - 32358884
Alignment:
Q  13 aatataacaaatataatataaattcttatctttttgaatgacaa 56  Q
    |||||| |||||||||||||||||||||||||||| ||||||||    
T  32358927 aatataccaaatataatataaattcttatctttttcaatgacaa 32358884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 36925323 - 36925366
Alignment:
Q  13 aatataacaaatataatataaattcttatctttttgaatgacaa 56  Q
    |||||||||||||||| |||||||||||||||||||||| ||||    
T  36925323 aatataacaaatataacataaattcttatctttttgaataacaa 36925366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 35338426 - 35338384
Alignment:
Q  13 aatataacaaatataatataaattcttatctttttgaatgaca 55  Q
    ||||||| ||||||||||||||||||||||||||| |||||||    
T  35338426 aatataataaatataatataaattcttatcttttttaatgaca 35338384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 39959451 - 39959409
Alignment:
Q  13 aatataacaaatataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||| |||| |||||||||||||    
T  39959451 aatataacaaatataatataaattattatttttttgaatgaca 39959409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 47439798 - 47439840
Alignment:
Q  13 aatataacaaatataatataaattcttatctttttgaatgaca 55  Q
    ||||||| |||||||||||||||| ||||||||||||||||||    
T  47439798 aatataataaatataatataaattattatctttttgaatgaca 47439840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 27425680 - 27425717
Alignment:
Q  18 aacaaatataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||| |||||||||||||||||    
T  27425680 aacaaatataatataaattcatatctttttgaatgaca 27425717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 539 - 648
Target Start/End: Original strand, 7809623 - 7809735
Alignment:
Q  539 ttcaattcaaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaaatgt----atcctattttatatgtctgaatttttcattatc 634  Q
    |||||| ||||||  |||||||||||| ||||||||||||||| ||||||| ||| ||||| |    | |  ||| ||||| ||||| |||||| |||||    
T  7809623 ttcaatacaaataatatatataacaaacagataagagtaaatttaaatatt-aaaaaaaatataacaaacaaattctatatatctgattttttccttatc 7809721  T
Q  635 atttaaaaaagata 648  Q
    ||||||||||||||    
T  7809722 atttaaaaaagata 7809735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 10039952 - 10039992
Alignment:
Q  13 aatataacaaatataatataaattcttatctttttgaatga 53  Q
    |||||| ||||||||||||||||| ||||||||||||||||    
T  10039952 aatatagcaaatataatataaattattatctttttgaatga 10039992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 20135614 - 20135582
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||||||||||    
T  20135614 atataatataaattcttatctttttgaatgaca 20135582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 539 - 599
Target Start/End: Original strand, 29693207 - 29693266
Alignment:
Q  539 ttcaattcaaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaaat 599  Q
    |||||| |||||| || ||||||| ||||||| |||||||||||||||||| |||||||||    
T  29693207 ttcaatgcaaataaca-atataacgaatagatgagagtaaattcaaatattaaaacaaaat 29693266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 558 - 589
Target Start/End: Original strand, 3531001 - 3531032
Alignment:
Q  558 ataacaaatagataagagtaaattcaaatatt 589  Q
    ||||||||||||||||||||||||||||||||    
T  3531001 ataacaaatagataagagtaaattcaaatatt 3531032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 539 - 598
Target Start/End: Original strand, 19396869 - 19396928
Alignment:
Q  539 ttcaattcaaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaaa 598  Q
    ||||||||||||| || || |||||||||||||||| |||||| ||||||| ||| ||||    
T  19396869 ttcaattcaaataacacatgtaacaaatagataagaataaatttaaatattaaaataaaa 19396928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 537 - 588
Target Start/End: Complemental strand, 26710429 - 26710378
Alignment:
Q  537 cattcaattcaaatatcatatataacaaatagataagagtaaattcaaatat 588  Q
    ||||||||  ||||| || ||||||||||||||||||| |||||||||||||    
T  26710429 cattcaatataaataacacatataacaaatagataagaataaattcaaatat 26710378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 546 - 597
Target Start/End: Complemental strand, 27725007 - 27724956
Alignment:
Q  546 caaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaa 597  Q
    |||||| ||||| |||||||||||||||| |||||| ||||||| |||||||    
T  27725007 caaataacatatgtaacaaatagataagaataaatttaaatattaaaacaaa 27724956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 539 - 598
Target Start/End: Original strand, 30908435 - 30908494
Alignment:
Q  539 ttcaattcaaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaaa 598  Q
    |||||| |||||| || |||||| |||||||||| |||||||||||||||| ||| ||||    
T  30908435 ttcaatacaaataacacatataataaatagataaaagtaaattcaaatattaaaataaaa 30908494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 539 - 598
Target Start/End: Original strand, 48109469 - 48109528
Alignment:
Q  539 ttcaattcaaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaaa 598  Q
    |||||| |||||| ||||| ||| |||||||||| | |||||||||||||||||| ||||    
T  48109469 ttcaatacaaataacatatttaaaaaatagataaaaataaattcaaatattcaaataaaa 48109528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 21 - 55
Target Start/End: Original strand, 1292086 - 1292120
Alignment:
Q  21 aaatataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||||| |||||||    
T  1292086 aaatataatataaattcttatcttttttaatgaca 1292120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 17 - 47
Target Start/End: Original strand, 5096508 - 5096538
Alignment:
Q  17 taacaaatataatataaattcttatcttttt 47  Q
    |||||||||||||||||||||||||||||||    
T  5096508 taacaaatataatataaattcttatcttttt 5096538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 539 - 589
Target Start/End: Original strand, 7468646 - 7468696
Alignment:
Q  539 ttcaattcaaatatcatatataacaaatagataagagtaaattcaaatatt 589  Q
    |||||| |||||| ||||| |||||||||||||||| |||||| |||||||    
T  7468646 ttcaatacaaataacatatgtaacaaatagataagaataaatttaaatatt 7468696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 17 - 55
Target Start/End: Complemental strand, 7606317 - 7606279
Alignment:
Q  17 taacaaatataatataaattcttatctttttgaatgaca 55  Q
    |||| ||||||||||||||| ||||||||||||||||||    
T  7606317 taactaatataatataaatttttatctttttgaatgaca 7606279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 539 - 589
Target Start/End: Original strand, 9412446 - 9412496
Alignment:
Q  539 ttcaattcaaatatcatatataacaaatagataagagtaaattcaaatatt 589  Q
    |||||| |||||| || ||||||||||||||||||| |||||| |||||||    
T  9412446 ttcaatacaaataacacatataacaaatagataagaataaatttaaatatt 9412496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 22711517 - 22711475
Alignment:
Q  13 aatataacaaatataatataaattcttatctttttgaatgaca 55  Q
    ||||||| ||||||||||||||||| ||| |||||||||||||    
T  22711517 aatataataaatataatataaattcatatttttttgaatgaca 22711475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 539 - 589
Target Start/End: Original strand, 25834353 - 25834403
Alignment:
Q  539 ttcaattcaaatatcatatataacaaatagataagagtaaattcaaatatt 589  Q
    |||||| |||||| ||||| |||||||||||||||| |||||| |||||||    
T  25834353 ttcaatacaaataacatatgtaacaaatagataagaataaatttaaatatt 25834403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 539 - 589
Target Start/End: Original strand, 27250552 - 27250602
Alignment:
Q  539 ttcaattcaaatatcatatataacaaatagataagagtaaattcaaatatt 589  Q
    |||||| |||||| || ||||||||||||||||||| |||||| |||||||    
T  27250552 ttcaatacaaataacacatataacaaatagataagaataaatttaaatatt 27250602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 539 - 589
Target Start/End: Complemental strand, 27723133 - 27723083
Alignment:
Q  539 ttcaattcaaatatcatatataacaaatagataagagtaaattcaaatatt 589  Q
    |||||| |||||| ||||| |||||||||||||||| |||||| |||||||    
T  27723133 ttcaatacaaataacatatgtaacaaatagataagaataaatttaaatatt 27723083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 38651723 - 38651681
Alignment:
Q  13 aatataacaaatataatataaattcttatctttttgaatgaca 55  Q
    |||||||||| ||| |||| |||||||||||||||||||||||    
T  38651723 aatataacaattatgatatgaattcttatctttttgaatgaca 38651681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 13 - 47
Target Start/End: Original strand, 47437799 - 47437833
Alignment:
Q  13 aatataacaaatataatataaattcttatcttttt 47  Q
    ||||||| |||||||||||||||||||||||||||    
T  47437799 aatataaaaaatataatataaattcttatcttttt 47437833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 42
Target Start/End: Complemental strand, 3434093 - 3434064
Alignment:
Q  13 aatataacaaatataatataaattcttatc 42  Q
    ||||||||||||||||||||||||||||||    
T  3434093 aatataacaaatataatataaattcttatc 3434064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 55
Target Start/End: Original strand, 4094294 - 4094335
Alignment:
Q  14 atataacaaatataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||| | || |||||||||||||    
T  4094294 atataacaaatataatataaattatcatatttttgaatgaca 4094335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 556 - 589
Target Start/End: Original strand, 4996126 - 4996159
Alignment:
Q  556 atataacaaatagataagagtaaattcaaatatt 589  Q
    |||||||||||||||||||||||||| |||||||    
T  4996126 atataacaaatagataagagtaaatttaaatatt 4996159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 556 - 589
Target Start/End: Complemental strand, 15994465 - 15994432
Alignment:
Q  556 atataacaaatagataagagtaaattcaaatatt 589  Q
    ||||||||||||||||| ||||||||||||||||    
T  15994465 atataacaaatagataaaagtaaattcaaatatt 15994432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 558 - 599
Target Start/End: Original strand, 40417373 - 40417414
Alignment:
Q  558 ataacaaatagataagagtaaattcaaatattcaaacaaaat 599  Q
    ||||||||||||||||||||||| |||||||| ||| |||||    
T  40417373 ataacaaatagataagagtaaatgcaaatattaaaataaaat 40417414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 46
Target Start/End: Original strand, 42851125 - 42851158
Alignment:
Q  13 aatataacaaatataatataaattcttatctttt 46  Q
    |||||||||||||||||| |||||||||||||||    
T  42851125 aatataacaaatataataaaaattcttatctttt 42851158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 4404119 - 4404151
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  4404119 atataatataaattcttatctttttaaatgaca 4404151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 4406880 - 4406848
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  4406880 atataatataaattcttatctttttaaatgaca 4406848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 6606427 - 6606459
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||||| |||||    
T  6606427 atataatataaattcttatctttttgactgaca 6606459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 6914043 - 6914011
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||||| ||||    
T  6914043 atataatataaattcttatctttttgaaagaca 6914011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 15 - 47
Target Start/End: Original strand, 7192295 - 7192327
Alignment:
Q  15 tataacaaatataatataaattcttatcttttt 47  Q
    ||||| |||||||||||||||||||||||||||    
T  7192295 tataataaatataatataaattcttatcttttt 7192327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 560 - 588
Target Start/End: Complemental strand, 12328404 - 12328376
Alignment:
Q  560 aacaaatagataagagtaaattcaaatat 588  Q
    |||||||||||||||||||||||||||||    
T  12328404 aacaaatagataagagtaaattcaaatat 12328376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 16933711 - 16933679
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  16933711 atataatataaattcttatctttttaaatgaca 16933679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 16939094 - 16939062
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  16939094 atataatataaattcttatctttttaaatgaca 16939062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 19036825 - 19036793
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||||| ||||    
T  19036825 atataatataaattcttatctttttgaaagaca 19036793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 20717811 - 20717843
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||||| ||||    
T  20717811 atataatataaattcttatctttttgaaagaca 20717843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 20762492 - 20762524
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||||| ||||    
T  20762492 atataatataaattcttatctttttgaaagaca 20762524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 29488058 - 29488090
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||||| ||||    
T  29488058 atataatataaattcttatctttttgaaagaca 29488090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 32806642 - 32806602
Alignment:
Q  15 tataacaaatataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||| || |||||| ||||||||    
T  32806642 tataacaaatataatataaattattctcttttggaatgaca 32806602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 33233120 - 33233088
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||||| ||||    
T  33233120 atataatataaattcttatctttttgaaagaca 33233088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 34285262 - 34285230
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||||| ||||    
T  34285262 atataatataaattcttatctttttgaaagaca 34285230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 35910100 - 35910132
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  35910100 atataatataaattcttatctttttaaatgaca 35910132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 37310646 - 37310614
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  37310646 atataatataaattcttatcttttttaatgaca 37310614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 40036270 - 40036238
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  40036270 atataatataaattcttatctttttaaatgaca 40036238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 42829506 - 42829474
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||||| ||||    
T  42829506 atataatataaattcttatctttttgaaagaca 42829474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 43110857 - 43110889
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  43110857 atataatataaattcttatctttttaaatgaca 43110889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 47139581 - 47139613
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  47139581 atataatataaattcttatctttttaaatgaca 47139613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 47576020 - 47575988
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||||| ||||    
T  47576020 atataatataaattcttatctttttgaaagaca 47575988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 47840554 - 47840586
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  47840554 atataatataaattcttatctttttaaatgaca 47840586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 3e-22; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 537 - 603
Target Start/End: Complemental strand, 14771015 - 14770949
Alignment:
Q  537 cattcaattcaaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaaatgtat 603  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  14771015 cattcaatgcaaataacatatataacaaatagataagagtaaattcaaatattaaaacaaaatgtat 14770949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 475 - 598
Target Start/End: Complemental strand, 49758713 - 49758590
Alignment:
Q  475 aagaaaataacatcttttgattcttttgaactgtctttttctccttcgaaaatcatcatcatcattcaattcaaatatcatatataacaaatagataaga 574  Q
    ||||||||| ||| |||||| |||||||   || ||||||||  ||| ||||| ||| ||| | |||||  |||||| || |||||||||||||||||||    
T  49758713 aagaaaatagcatgttttgactcttttgggttgactttttctgtttctaaaattatcctcaactttcaaaacaaataacacatataacaaatagataaga 49758614  T
Q  575 gtaaattcaaatattcaaacaaaa 598  Q
    ||||||||||||||| ||| ||||    
T  49758613 gtaaattcaaatattaaaataaaa 49758590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 2594551 - 2594509
Alignment:
Q  13 aatataacaaatataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  2594551 aatataacaaatataatataaattcttatctttttgaatgaca 2594509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 537 - 603
Target Start/End: Original strand, 21967207 - 21967273
Alignment:
Q  537 cattcaattcaaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaaatgtat 603  Q
    |||||||| |||||| || ||||||||||||||||| |||||||||||||| | |||||||||||||    
T  21967207 cattcaatacaaataacacatataacaaatagataaaagtaaattcaaataataaaacaaaatgtat 21967273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 537 - 603
Target Start/End: Original strand, 21989643 - 21989709
Alignment:
Q  537 cattcaattcaaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaaatgtat 603  Q
    |||||||| |||||| || ||||||||||||||||| |||||||||||||| | |||||||||||||    
T  21989643 cattcaatacaaataacacatataacaaatagataaaagtaaattcaaataataaaacaaaatgtat 21989709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 539 - 598
Target Start/End: Original strand, 23267846 - 23267905
Alignment:
Q  539 ttcaattcaaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaaa 598  Q
    |||||| |||||| || |||||||||||||||||||||||||||||||||| ||| ||||    
T  23267846 ttcaatacaaataacacatataacaaatagataagagtaaattcaaatattaaaataaaa 23267905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 475 - 589
Target Start/End: Complemental strand, 29626133 - 29626019
Alignment:
Q  475 aagaaaataacatcttttgattcttttgaactgtctttttctccttcgaaaatcatcatcatcattcaattcaaatatcatatataacaaatagataaga 574  Q
    |||||||||||||  ||||| |||||||  ||| ||||||||| ||| ||||| ||| ||| | |||||| |||||| || |||||||||||| |||| |    
T  29626133 aagaaaataacatgctttgactcttttgggctgactttttctctttccaaaattatcttcaactttcaatacaaataacacatataacaaatatataata 29626034  T
Q  575 gtaaattcaaatatt 589  Q
     |||| |||||||||    
T  29626033 ataaaatcaaatatt 29626019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 547 - 599
Target Start/End: Original strand, 21495407 - 21495459
Alignment:
Q  547 aaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaaat 599  Q
    ||||| ||||| ||||||||||||||||||||||| ||||||| |||||||||    
T  21495407 aaataacatatgtaacaaatagataagagtaaatttaaatattaaaacaaaat 21495459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 539 - 598
Target Start/End: Complemental strand, 19468290 - 19468231
Alignment:
Q  539 ttcaattcaaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaaa 598  Q
    |||||| |||||| || ||||||||| |||||||||||||||||||||||| ||| ||||    
T  19468290 ttcaatacaaatagcacatataacaattagataagagtaaattcaaatattaaaataaaa 19468231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 20 - 55
Target Start/End: Original strand, 34230509 - 34230544
Alignment:
Q  20 caaatataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||||||||||||||    
T  34230509 caaatataatataaattcttatctttttgaatgaca 34230544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 14 - 53
Target Start/End: Original strand, 36643583 - 36643622
Alignment:
Q  14 atataacaaatataatataaattcttatctttttgaatga 53  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  36643583 atataacaaatataatataaattcttatcgttttgaatga 36643622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 21594492 - 21594534
Alignment:
Q  13 aatataacaaatataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||| |||||||||| |||||    
T  21594492 aatataacaaatataatataaattctcatctttttgagtgaca 21594534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 47409671 - 47409629
Alignment:
Q  13 aatataacaaatataatataaattcttatctttttgaatgaca 55  Q
    |||||||||| ||||||||||||||||||||||||| ||||||    
T  47409671 aatataacaagtataatataaattcttatctttttggatgaca 47409629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 529 - 583
Target Start/End: Original strand, 49429976 - 49430030
Alignment:
Q  529 atcatcatcattcaattcaaatatcatatataacaaatagataagagtaaattca 583  Q
    ||||||| | |||| | |||||||||||||||||||||| |||||||||||||||    
T  49429976 atcatcaactttcactacaaatatcatatataacaaatacataagagtaaattca 49430030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 51
Target Start/End: Complemental strand, 50585812 - 50585774
Alignment:
Q  13 aatataacaaatataatataaattcttatctttttgaat 51  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  50585812 aatataacaaatataatataaatttttatctttttgaat 50585774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 10617010 - 10617042
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||||||||||    
T  10617010 atataatataaattcttatctttttgaatgaca 10617042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 13867297 - 13867251
Alignment:
Q  8 cgaagaatataacaaatataatataaattcttatctttttgaatgaca 55  Q
    |||| |||||||||||||||||||||||||||||  ||||||||||||    
T  13867297 cgaacaatataacaaatataatataaattcttat-attttgaatgaca 13867251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 21363659 - 21363698
Alignment:
Q  16 ataacaaatataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||| ||| ||||||||||||||||||    
T  21363659 ataacaaatataatatacatttttatctttttgaatgaca 21363698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 48
Target Start/End: Complemental strand, 42618173 - 42618142
Alignment:
Q  17 taacaaatataatataaattcttatctttttg 48  Q
    ||||||||||||||||||||||||||||||||    
T  42618173 taacaaatataatataaattcttatctttttg 42618142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 66025 - 65983
Alignment:
Q  13 aatataacaaatataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||| ||||| |||| ||||||||||||||||||    
T  66025 aatataacaaataaaatatgaatttttatctttttgaatgaca 65983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 13 - 47
Target Start/End: Complemental strand, 17583282 - 17583248
Alignment:
Q  13 aatataacaaatataatataaattcttatcttttt 47  Q
    |||||||||||||||||| ||||||||||||||||    
T  17583282 aatataacaaatataataaaaattcttatcttttt 17583248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 539 - 597
Target Start/End: Original strand, 17589982 - 17590040
Alignment:
Q  539 ttcaattcaaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaa 597  Q
    |||||| |||||| ||||| ||| |||||||||||| |||||| ||||||| |||||||    
T  17589982 ttcaatacaaataacatatgtaataaatagataagaataaatttaaatattaaaacaaa 17590040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 539 - 597
Target Start/End: Complemental strand, 18875336 - 18875278
Alignment:
Q  539 ttcaattcaaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaa 597  Q
    |||||| |||||| || || |||||||||||||||| |||||| ||||||| |||||||    
T  18875336 ttcaatacaaataacacatgtaacaaatagataagaataaatttaaatattaaaacaaa 18875278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 17 - 47
Target Start/End: Complemental strand, 28170671 - 28170641
Alignment:
Q  17 taacaaatataatataaattcttatcttttt 47  Q
    |||||||||||||||||||||||||||||||    
T  28170671 taacaaatataatataaattcttatcttttt 28170641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 13 - 47
Target Start/End: Complemental strand, 36637226 - 36637192
Alignment:
Q  13 aatataacaaatataatataaattcttatcttttt 47  Q
    |||||||||||||||||| ||||||||||||||||    
T  36637226 aatataacaaatataataaaaattcttatcttttt 36637192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 41988512 - 41988470
Alignment:
Q  13 aatataacaaatataatataaattcttatctttttgaatgaca 55  Q
    ||||||| || |||||||||||||||||||||| |||||||||    
T  41988512 aatataataagtataatataaattcttatctttatgaatgaca 41988470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 17 - 47
Target Start/End: Original strand, 44177008 - 44177038
Alignment:
Q  17 taacaaatataatataaattcttatcttttt 47  Q
    |||||||||||||||||||||||||||||||    
T  44177008 taacaaatataatataaattcttatcttttt 44177038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 539 - 589
Target Start/End: Original strand, 45879613 - 45879663
Alignment:
Q  539 ttcaattcaaatatcatatataacaaatagataagagtaaattcaaatatt 589  Q
    |||||| ||||||  |||||||||||||| || ||||||||||||||||||    
T  45879613 ttcaatacaaatagtatatataacaaatatattagagtaaattcaaatatt 45879663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 13 - 47
Target Start/End: Complemental strand, 47968380 - 47968346
Alignment:
Q  13 aatataacaaatataatataaattcttatcttttt 47  Q
    |||||||||||| ||||||||||||||||||||||    
T  47968380 aatataacaaatgtaatataaattcttatcttttt 47968346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 50
Target Start/End: Complemental strand, 12170981 - 12170948
Alignment:
Q  17 taacaaatataatataaattcttatctttttgaa 50  Q
    ||||||||||||||||||||||||| ||||||||    
T  12170981 taacaaatataatataaattcttatatttttgaa 12170948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 558 - 603
Target Start/End: Original strand, 20838039 - 20838084
Alignment:
Q  558 ataacaaatagataagagtaaattcaaatattcaaacaaaatgtat 603  Q
    |||||||||||||||||||| ||||||||||| ||| |||| ||||    
T  20838039 ataacaaatagataagagtagattcaaatatttaaaaaaaaagtat 20838084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 47
Target Start/End: Complemental strand, 54114410 - 54114377
Alignment:
Q  14 atataacaaatataatataaattcttatcttttt 47  Q
    |||||||||||||||||||||||||||| |||||    
T  54114410 atataacaaatataatataaattcttattttttt 54114377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 54831503 - 54831536
Alignment:
Q  23 atataatataaattcttatctttttgaatgacaa 56  Q
    ||||||||||||||||||||||||| ||||||||    
T  54831503 atataatataaattcttatcttttttaatgacaa 54831536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 915855 - 915887
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||||| ||||    
T  915855 atataatataaattcttatctttttgaaagaca 915887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 5254937 - 5254905
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||||| ||||    
T  5254937 atataatataaattcttatctttttgaaagaca 5254905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 546 - 598
Target Start/End: Complemental strand, 7791505 - 7791453
Alignment:
Q  546 caaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaaa 598  Q
    ||||||||| |||| ||||||| ||||||||||||| ||||||| ||| ||||    
T  7791505 caaatatcacatatgacaaatatataagagtaaattgaaatattaaaataaaa 7791453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 21 - 53
Target Start/End: Original strand, 8231690 - 8231722
Alignment:
Q  21 aaatataatataaattcttatctttttgaatga 53  Q
    ||||||||||||||||||||||||||| |||||    
T  8231690 aaatataatataaattcttatcttttttaatga 8231722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 510 - 602
Target Start/End: Complemental strand, 13475646 - 13475555
Alignment:
Q  510 tttttctccttcgaaaatcatcatcatcattcaattcaaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaaatgta 602  Q
    |||||||||||| ||||| |  |||| | |||||| ||||||  | |||||||||| | ||||||||||||| ||||||| ||| ||||||||    
T  13475646 tttttctccttcaaaaattacaatcaactttcaatgcaaatagtacatataacaaaaa-ataagagtaaatttaaatattaaaataaaatgta 13475555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 554 - 598
Target Start/End: Complemental strand, 30806119 - 30806075
Alignment:
Q  554 atatataacaaatagataagagtaaattcaaatattcaaacaaaa 598  Q
    |||||||||||||| ||||||||||||| ||||||| ||| ||||    
T  30806119 atatataacaaataaataagagtaaattaaaatattaaaataaaa 30806075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 33899744 - 33899776
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  33899744 atataatataaattcttatctttttaaatgaca 33899776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 34413354 - 34413314
Alignment:
Q  15 tataacaaatataatataaattcttatctttttgaatgaca 55  Q
    ||||||||  |||||||||||| ||||||||||||||||||    
T  34413354 tataacaataataatataaattattatctttttgaatgaca 34413314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 518 - 602
Target Start/End: Original strand, 34667263 - 34667346
Alignment:
Q  518 cttcgaaaatcatcatcatcattcaattcaaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaaatgta 602  Q
    |||| ||||| | ||||| | |||||| |||||| |  ||||||||||||||||| | |||||||||||||| ||| ||||||||    
T  34667263 cttccaaaattaccatcaactttcaatacaaatagcgcatataacaaatagataaaaataaattcaaatatt-aaaaaaaatgta 34667346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 35530069 - 35530037
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  35530069 atataatataaattcttatctttttaaatgaca 35530037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 35690965 - 35690933
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||||| |||||    
T  35690965 atataatataaattcttatctttttgactgaca 35690933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 37413171 - 37413203
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  37413171 atataatataaattcttatctttttaaatgaca 37413203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 24 - 56
Target Start/End: Original strand, 39199172 - 39199204
Alignment:
Q  24 tataatataaattcttatctttttgaatgacaa 56  Q
    |||||||||||||||||| ||||||||||||||    
T  39199172 tataatataaattcttatttttttgaatgacaa 39199204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 39721084 - 39721116
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  39721084 atataatataaattcttatctttttaaatgaca 39721116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 39799025 - 39798993
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||||| ||||    
T  39799025 atataatataaattcttatctttttgaaagaca 39798993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 41991918 - 41991886
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  41991918 atataatataaattcttatctttttaaatgaca 41991886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 42188472 - 42188440
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||||| |||||    
T  42188472 atataatataaattcttatctttttgactgaca 42188440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 43317105 - 43317073
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  43317105 atataatataaattcttatctttttaaatgaca 43317073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 44075879 - 44075847
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||||| ||||    
T  44075879 atataatataaattcttatctttttgaaagaca 44075847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 44762976 - 44762944
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  44762976 atataatataaattcttatctttttaaatgaca 44762944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 46851204 - 46851172
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||| ||||||||||||||||||    
T  46851204 atataatataaattattatctttttgaatgaca 46851172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 50932549 - 50932581
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||||| |||||    
T  50932549 atataatataaattcttatctttttgactgaca 50932581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 52468360 - 52468328
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||||| ||||    
T  52468360 atataatataaattcttatctttttgaaagaca 52468328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 1e-18; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 556 - 644
Target Start/End: Complemental strand, 32591416 - 32591328
Alignment:
Q  556 atataacaaatagataagagtaaattcaaatattcaaacaaaatgtatcctattttatatgtctgaatttttcattatcatttaaaaaa 644  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||    |||||||||||  || |||||| |||||||||||||||    
T  32591416 atataacaaatagataaaagtaaattcaaatattaaaacaaaatgtaataaattttatatgttcgattttttctttatcatttaaaaaa 32591328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 475 - 598
Target Start/End: Complemental strand, 23773681 - 23773554
Alignment:
Q  475 aagaaaataacatcttttgattcttttgaactgtctttttctccttcgaaaatcatcatcatcattcaattcaaatatcata----tataacaaatagat 570  Q
    ||||||||||||| ||| ||||||||||| ||||||||||||| ||| ||||| ||| |||   |||||| ||||||  | |    ||||||||||||||    
T  23773681 aagaaaataacatgtttcgattcttttgagctgtctttttctctttccaaaattatcctcaaatttcaatacaaatagaacaaacatataacaaatagat 23773582  T
Q  571 aagagtaaattcaaatattcaaacaaaa 598  Q
    ||||||||||||||||||| ||| ||||    
T  23773581 aagagtaaattcaaatattaaaataaaa 23773554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 546 - 599
Target Start/End: Complemental strand, 13281262 - 13281209
Alignment:
Q  546 caaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaaat 599  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||| |||||    
T  13281262 caaatatcatatataacaaataaataagagtaaattcaaatattaaaataaaat 13281209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 557 - 602
Target Start/End: Original strand, 48420336 - 48420381
Alignment:
Q  557 tataacaaatagataagagtaaattcaaatattcaaacaaaatgta 602  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  48420336 tataacaaatagataagagtaaattcaaatattaaaacaaaatgta 48420381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 556 - 648
Target Start/End: Original strand, 15474839 - 15474931
Alignment:
Q  556 atataacaaatagataagagtaaattcaaatattcaaacaaaatgtatcctattttatatgtctgaatttttcattatcatttaaaaaagata 648  Q
    |||||| ||||| |||||| |||||| ||||||| |||||||||||| |  ||| |||||||| || |||||| |||||||||||||| ||||    
T  15474839 atataagaaatatataagaataaatttaaatattaaaacaaaatgtaacaaattatatatgtccgattttttccttatcatttaaaaatgata 15474931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 496 - 603
Target Start/End: Original strand, 43019720 - 43019830
Alignment:
Q  496 tcttttgaactgtctttttctccttcgaaaatcatcatcatcattcaattcaaatatcatatataacaaatagataagagtaaattcaaa---tattcaa 592  Q
    ||||||||||||  |||||||||||  ||||| ||| ||| | |||||| | ||||||| |||||| ||||||||||||||||||| |||   |||| ||    
T  43019720 tcttttgaactgattttttctcctttcaaaattatcctcaactttcaatacgaatatcacatataataaatagataagagtaaatttaaatactattaaa 43019819  T
Q  593 acaaaatgtat 603  Q
    |||||||||||    
T  43019820 acaaaatgtat 43019830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 31239138 - 31239095
Alignment:
Q  10 aagaatataacaaatataatataaattcttatctttttgaatga 53  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  31239138 aagaatataacaaatataatataaattcttatctttttaaatga 31239095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 523 - 598
Target Start/End: Complemental strand, 36605784 - 36605709
Alignment:
Q  523 aaaatcatcatcatcattcaattcaaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaaa 598  Q
    ||||| ||||||| |||||||| |||||| || |||||||||||||||||||| |||| |||||||| ||| ||||    
T  36605784 aaaattatcatcaacattcaatacaaataacacatataacaaatagataagaggaaatgcaaatattaaaataaaa 36605709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 55
Target Start/End: Complemental strand, 21966306 - 21966268
Alignment:
Q  17 taacaaatataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||||||||||||||||    
T  21966306 taacaaatataatataaattcttatctttttgaatgaca 21966268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 489 - 589
Target Start/End: Complemental strand, 6045141 - 6045041
Alignment:
Q  489 ttttgattcttttgaactgtctttttctccttcgaaaatcatcatcatcattcaattcaaatatcatatataacaaatagataagagtaaattcaaatat 588  Q
    ||||||||||||||||||  ||||||||| ||  ||||| ||||||| | ||  || |||||| || | |||||||||||| || |||||||||||||||    
T  6045141 ttttgattcttttgaactaactttttctcttttcaaaattatcatcaactttttatacaaatagcacacataacaaatagacaatagtaaattcaaatat 6045042  T
Q  589 t 589  Q
    |    
T  6045041 t 6045041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 565 - 644
Target Start/End: Complemental strand, 777367 - 777288
Alignment:
Q  565 atagataagagtaaattcaaatattcaaacaaaatgtatcctattttatatgtctgaatttttcattatcatttaaaaaa 644  Q
    |||||||| |||||||||||||||| |||||||||||| |  | | ||||| || || |||||| |||||||||||||||    
T  777367 atagataaaagtaaattcaaatattaaaacaaaatgtaacaaactatatatatccgattttttctttatcatttaaaaaa 777288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 510 - 581
Target Start/End: Original strand, 898712 - 898783
Alignment:
Q  510 tttttctccttcgaaaatcatcatcatcattcaattcaaatatcatatataacaaatagataagagtaaatt 581  Q
    |||||||| ||| ||||| | | ||| |||||||| |||||| || ||||||||||||||||||||||||||    
T  898712 tttttctctttccaaaattaccttcaacattcaatacaaatagcacatataacaaatagataagagtaaatt 898783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 546 - 589
Target Start/End: Complemental strand, 13315429 - 13315386
Alignment:
Q  546 caaatatcatatataacaaatagataagagtaaattcaaatatt 589  Q
    |||||| ||||||||||||||||||||||||||||| |||||||    
T  13315429 caaataacatatataacaaatagataagagtaaatttaaatatt 13315386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 5257130 - 5257088
Alignment:
Q  13 aatataacaaatataatataaattcttatctttttgaatgaca 55  Q
    ||||||| ||||||| |||||||||||||||||||||||||||    
T  5257130 aatataataaatatactataaattcttatctttttgaatgaca 5257088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 10427411 - 10427369
Alignment:
Q  13 aatataacaaatataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||| ||||||||||||| |||||||    
T  10427411 aatataacaaatataatataagttcttatctttttaaatgaca 10427369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 12294518 - 12294476
Alignment:
Q  13 aatataacaaatataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||||||||||||  |||||||    
T  12294518 aatataacaaatataatataaattcttatcttttaaaatgaca 12294476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 547 - 641
Target Start/End: Complemental strand, 27579647 - 27579553
Alignment:
Q  547 aaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaaatgtatcctattttatatgtctgaatttttcattatcatttaaa 641  Q
    ||||| || |||||| |||||||||||||| |||| ||||||| || ||||||||| |  | | |||||||| || |||||| ||||||||||||    
T  27579647 aaataacacatataataaatagataagagtgaatttaaatattaaagcaaaatgtaacaaactgtatatgtccgattttttccttatcatttaaa 27579553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 556 - 589
Target Start/End: Original strand, 15596784 - 15596817
Alignment:
Q  556 atataacaaatagataagagtaaattcaaatatt 589  Q
    ||||||||||||||||||||||||||||||||||    
T  15596784 atataacaaatagataagagtaaattcaaatatt 15596817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 27349029 - 27348988
Alignment:
Q  14 atataacaaatataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||| |||| |||||||||||||    
T  27349029 atataacaaatataatataaattattatatttttgaatgaca 27348988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 539 - 588
Target Start/End: Complemental strand, 43416135 - 43416086
Alignment:
Q  539 ttcaattcaaatatcatatataacaaatagataagagtaaattcaaatat 588  Q
    |||||| |||||| || ||||||||||| |||||||||||||||||||||    
T  43416135 ttcaatgcaaataacacatataacaaattgataagagtaaattcaaatat 43416086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 11606875 - 11606843
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||||||||||    
T  11606875 atataatataaattcttatctttttgaatgaca 11606843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 44821040 - 44821072
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||||||||||    
T  44821040 atataatataaattcttatctttttgaatgaca 44821072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 6295046 - 6295085
Alignment:
Q  16 ataacaaatataatataaattcttatctttttgaatgaca 55  Q
    |||| |||||||| ||||||||||||||||||||||||||    
T  6295046 ataataaatataacataaattcttatctttttgaatgaca 6295085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 539 - 598
Target Start/End: Original strand, 13309235 - 13309294
Alignment:
Q  539 ttcaattcaaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaaa 598  Q
    |||||| |||||| || |||||| ||||||||||||| ||||||||||||| ||| ||||    
T  13309235 ttcaatacaaataacacatataataaatagataagagaaaattcaaatattaaaataaaa 13309294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 546 - 621
Target Start/End: Original strand, 17504360 - 17504435
Alignment:
Q  546 caaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaaatgtatcctattttatatgtctga 621  Q
    |||||| || ||||||||||||||||| | |||| ||||||||| ||| |||||||| |  ||| |||||||||||    
T  17504360 caaataacacatataacaaatagataaaaataaactcaaatattaaaataaaatgtaacaaattgtatatgtctga 17504435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 43019496 - 43019539
Alignment:
Q  13 aatataacaaatataatataaattcttatc-tttttgaatgaca 55  Q
    |||| ||||||||||||||||||||||||| |||||||||||||    
T  43019496 aatacaacaaatataatataaattcttatcttttttgaatgaca 43019539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 539 - 589
Target Start/End: Complemental strand, 8209674 - 8209624
Alignment:
Q  539 ttcaattcaaatatcatatataacaaatagataagagtaaattcaaatatt 589  Q
    |||||| |||||| || |||||||||||| |||||| ||||||||||||||    
T  8209674 ttcaatacaaatagcacatataacaaatacataagaataaattcaaatatt 8209624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 13 - 47
Target Start/End: Original strand, 17124629 - 17124663
Alignment:
Q  13 aatataacaaatataatataaattcttatcttttt 47  Q
    |||||||||||| ||||||||||||||||||||||    
T  17124629 aatataacaaatgtaatataaattcttatcttttt 17124663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 539 - 589
Target Start/End: Complemental strand, 17580088 - 17580038
Alignment:
Q  539 ttcaattcaaatatcatatataacaaatagataagagtaaattcaaatatt 589  Q
    |||||| |||||| ||||| |||||||||||||||| |||||| |||||||    
T  17580088 ttcaatacaaataacatatgtaacaaatagataagaataaatttaaatatt 17580038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 25 - 55
Target Start/End: Complemental strand, 33218457 - 33218427
Alignment:
Q  25 ataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||||||||    
T  33218457 ataatataaattcttatctttttgaatgaca 33218427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 13 - 47
Target Start/End: Complemental strand, 35112463 - 35112429
Alignment:
Q  13 aatataacaaatataatataaattcttatcttttt 47  Q
    |||||| ||||||||||||||||||||||||||||    
T  35112463 aatatagcaaatataatataaattcttatcttttt 35112429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 38901165 - 38901207
Alignment:
Q  13 aatataacaaatataatataaattcttatctttttgaatgaca 55  Q
    ||||||| |||||||||||| ||| ||||||||||||||||||    
T  38901165 aatataataaatataatatagatttttatctttttgaatgaca 38901207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 556 - 598
Target Start/End: Original strand, 42676550 - 42676592
Alignment:
Q  556 atataacaaatagataagagtaaattcaaatattcaaacaaaa 598  Q
    |||||||||||||||||| ||||||||||||||| ||| ||||    
T  42676550 atataacaaatagataagggtaaattcaaatattaaaataaaa 42676592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 539 - 589
Target Start/End: Original strand, 48455119 - 48455169
Alignment:
Q  539 ttcaattcaaatatcatatataacaaatagataagagtaaattcaaatatt 589  Q
    ||||||||||||| ||||| | |||||||||||||| |||||| |||||||    
T  48455119 ttcaattcaaataacatatgtgacaaatagataagaataaatttaaatatt 48455169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 49840478 - 49840520
Alignment:
Q  13 aatataacaaatataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||| |||||||| ||||| |||||||    
T  49840478 aatataacaaatataatatacattcttatattttttaatgaca 49840520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 46
Target Start/End: Complemental strand, 2653410 - 2653377
Alignment:
Q  13 aatataacaaatataatataaattcttatctttt 46  Q
    ||||||||||||||||||||||||||||| ||||    
T  2653410 aatataacaaatataatataaattcttatatttt 2653377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 9848424 - 9848383
Alignment:
Q  14 atataacaaatataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||| ||||||||||| |||||||||| ||||    
T  9848424 atataacaaatatattataaattcttttctttttgaacgaca 9848383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 46
Target Start/End: Complemental strand, 11463944 - 11463911
Alignment:
Q  13 aatataacaaatataatataaattcttatctttt 46  Q
    |||||||||||||||||| |||||||||||||||    
T  11463944 aatataacaaatataataaaaattcttatctttt 11463911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 553 - 602
Target Start/End: Complemental strand, 25222814 - 25222765
Alignment:
Q  553 catatataacaaatagataagagtaaattcaaatattcaaacaaaatgta 602  Q
    ||||||||||||| |||||||  |||||||||||||| || |||||||||    
T  25222814 catatataacaaacagataagtataaattcaaatattaaaccaaaatgta 25222765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 34652115 - 34652148
Alignment:
Q  23 atataatataaattcttatctttttgaatgacaa 56  Q
    ||||||||||||||||||||||||| ||||||||    
T  34652115 atataatataaattcttatctttttaaatgacaa 34652148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 44065607 - 44065574
Alignment:
Q  23 atataatataaattcttatctttttgaatgacaa 56  Q
    |||||||||||| |||||||||||||||||||||    
T  44065607 atataatataaactcttatctttttgaatgacaa 44065574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 1322769 - 1322737
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  1322769 atataatataaattcttatctttttaaatgaca 1322737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 6013046 - 6013007
Alignment:
Q  15 tataacaaatataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||| |||||||||| |||||||    
T  6013046 tataacaaatataatataaatt-ttatctttttcaatgaca 6013007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 7308703 - 7308671
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  7308703 atataatataaattcttatctttttaaatgaca 7308671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 7910106 - 7910074
Alignment:
Q  14 atataacaaatataatataaattcttatctttt 46  Q
    |||||| ||||||||||||||||||||||||||    
T  7910106 atataaaaaatataatataaattcttatctttt 7910074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 546 - 598
Target Start/End: Original strand, 12266770 - 12266822
Alignment:
Q  546 caaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaaa 598  Q
    |||||| || |||||||||||||||||||||||| | ||||||| ||| ||||    
T  12266770 caaataacacatataacaaatagataagagtaaacttaaatattaaaataaaa 12266822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 16096696 - 16096728
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||||| |||||    
T  16096696 atataatataaattcttatctttttgactgaca 16096728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 17366598 - 17366566
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  17366598 atataatataaattcttatctttttaaatgaca 17366566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 18090833 - 18090865
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||||| ||||    
T  18090833 atataatataaattcttatctttttgaaagaca 18090865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 18109286 - 18109318
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||||| ||||    
T  18109286 atataatataaattcttatctttttgaaagaca 18109318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 24473802 - 24473770
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  24473802 atataatataaattcttatctttttaaatgaca 24473770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 558 - 602
Target Start/End: Complemental strand, 27928643 - 27928599
Alignment:
Q  558 ataacaaatagataagagtaaattcaaatattcaaacaaaatgta 602  Q
    |||||||||| ||||||||||||| ||||||| ||| ||||||||    
T  27928643 ataacaaataaataagagtaaattaaaatattaaaaaaaaatgta 27928599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 33932743 - 33932775
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  33932743 atataatataaattcttatctttttaaatgaca 33932775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 558 - 598
Target Start/End: Original strand, 34555283 - 34555323
Alignment:
Q  558 ataacaaatagataagagtaaattcaaatattcaaacaaaa 598  Q
    |||||||||| ||||||||||||||||||||| ||| ||||    
T  34555283 ataacaaatacataagagtaaattcaaatattaaaataaaa 34555323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 39729456 - 39729424
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  39729456 atataatataaattcttatctttttaaatgaca 39729424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 39879388 - 39879356
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  39879388 atataatataaattcttatctttttaaatgaca 39879356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 43122383 - 43122415
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||||| |||||    
T  43122383 atataatataaattcttatctttttgactgaca 43122415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 43257235 - 43257203
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||||| ||||    
T  43257235 atataatataaattcttatctttttgaaagaca 43257203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 21 - 53
Target Start/End: Complemental strand, 44440465 - 44440433
Alignment:
Q  21 aaatataatataaattcttatctttttgaatga 53  Q
    |||||||||||||||| ||||||||||||||||    
T  44440465 aaatataatataaatttttatctttttgaatga 44440433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 46040815 - 46040783
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  46040815 atataatataaattcttatctttttaaatgaca 46040783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 49571029 - 49571061
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  49571029 atataatataaattcttatctttttaaatgaca 49571061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 50397649 - 50397617
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||||| ||||    
T  50397649 atataatataaattcttatctttttgaaagaca 50397617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 2e-17; HSPs: 60)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 539 - 648
Target Start/End: Complemental strand, 31555747 - 31555640
Alignment:
Q  539 ttcaattcaaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaaatgtatcctattttatatgtctgaatttttcattatcattt 638  Q
    |||||| |||||| ||||||||||||||| ||||| ||||||||||||||| |||||||||||| |  |  ||  ||||| || |||||| |||||||||    
T  31555747 ttcaatacaaataacatatataacaaataaataagtgtaaattcaaatattaaaacaaaatgtaac--aaattgaatgtccgattttttccttatcattt 31555650  T
Q  639 aaaaaagata 648  Q
    ||||||||||    
T  31555649 aaaaaagata 31555640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 476 - 589
Target Start/End: Original strand, 16039110 - 16039223
Alignment:
Q  476 agaaaataacatcttttgattcttttgaactgtctttttctccttcgaaaatcatcatcatcattcaattcaaatatcatatataacaaatagataagag 575  Q
    |||||||||||| ||||||||||||||  ||| ||||||  | ||| ||||| | | ||| | |||||| |||||| || ||||||||||| ||||||||    
T  16039110 agaaaataacatgttttgattcttttgggctgacttttttcctttctaaaattaccctcaactttcaatacaaataacacatataacaaattgataagag 16039209  T
Q  576 taaattcaaatatt 589  Q
    || |||||||||||    
T  16039210 tagattcaaatatt 16039223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 28417032 - 28416984
Alignment:
Q  7 tcgaagaatataacaaatataatataaattcttatctttttgaatgaca 55  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  28417032 tcgaaaaatataacaactataatataaattcttatctttttgaatgaca 28416984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 540 - 602
Target Start/End: Complemental strand, 17641019 - 17640957
Alignment:
Q  540 tcaattcaaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaaatgta 602  Q
    ||||| |||||| ||| | ||||||||||| ||||||||||||||||||| ||||||||||||    
T  17641019 tcaatacaaataacatttgtaacaaatagacaagagtaaattcaaatattaaaacaaaatgta 17640957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 11090168 - 11090128
Alignment:
Q  13 aatataacaaatataatataaattcttatctttttgaatga 53  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  11090168 aatataataaatataatataaattcttatctttttgaatga 11090128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 475 - 598
Target Start/End: Complemental strand, 9243969 - 9243846
Alignment:
Q  475 aagaaaataacatcttttgattcttttgaactgtctttttctccttcgaaaatcatcatcatcattcaattcaaatatcatatataacaaatagataaga 574  Q
    ||||||||||||| |||   |||||||| | || ||||||||| ||  |||||  |||||| | |||||| ||||||  | ||||||||||||||||| |    
T  9243969 aagaaaataacatgtttccgttcttttggattgactttttctcttttcaaaattgtcatcaactttcaatacaaataatacatataacaaatagataaaa 9243870  T
Q  575 gtaaattcaaatattcaaacaaaa 598  Q
     |||||||||||||| ||| ||||    
T  9243869 ataaattcaaatattaaaataaaa 9243846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 8904952 - 8904994
Alignment:
Q  13 aatataacaaatataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||| ||||||||||||||||| ||||||||||    
T  8904952 aatataacaaatatgatataaattcttatcttgttgaatgaca 8904994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 11681636 - 11681678
Alignment:
Q  13 aatataacaaatataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||| |||| |||||||||||||    
T  11681636 aatataacaaatataatataaatttttatatttttgaatgaca 11681678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 11694210 - 11694252
Alignment:
Q  13 aatataacaaatataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||| |||| |||||||||||||    
T  11694210 aatataacaaatataatataaatttttatatttttgaatgaca 11694252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 12599593 - 12599551
Alignment:
Q  13 aatataacaaatataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||||||||||| | |||||||    
T  12599593 aatataacaaatataatataaattcttatctttcttaatgaca 12599551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 47
Target Start/End: Complemental strand, 23914649 - 23914615
Alignment:
Q  13 aatataacaaatataatataaattcttatcttttt 47  Q
    |||||||||||||||||||||||||||||||||||    
T  23914649 aatataacaaatataatataaattcttatcttttt 23914615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 38502320 - 38502279
Alignment:
Q  13 aatataacaaa-tataatataaattcttatctttttgaatga 53  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  38502320 aatataacaaaatataatataaattcttatctttttgaatga 38502279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 510 - 598
Target Start/End: Original strand, 37867430 - 37867518
Alignment:
Q  510 tttttctccttcgaaaatcatcatcatcattcaattcaaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaaa 598  Q
    |||||||| ||| ||||| | | ||| | ||||||  ||||| || |||||||||||| ||||||||||||||||||||  ||||||||    
T  37867430 tttttctctttccaaaattaccctcaactttcaataaaaataacacatataacaaataaataagagtaaattcaaatatcaaaacaaaa 37867518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 539 - 599
Target Start/End: Original strand, 42444398 - 42444458
Alignment:
Q  539 ttcaattcaaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaaat 599  Q
    |||||| |||||| || |||||||||||| ||||||||||||| ||||||| ||| |||||    
T  42444398 ttcaatacaaatagcacatataacaaataaataagagtaaatttaaatattaaaataaaat 42444458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 539 - 602
Target Start/End: Original strand, 5879976 - 5880038
Alignment:
Q  539 ttcaattcaaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaaatgta 602  Q
    |||||| |||||| ||||| |||||||||||||||| |||||| ||||||| ||| ||||||||    
T  5879976 ttcaatacaaataacatatgtaacaaatagataagaataaatttaaatatt-aaaaaaaatgta 5880038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 554 - 589
Target Start/End: Original strand, 19133173 - 19133208
Alignment:
Q  554 atatataacaaatagataagagtaaattcaaatatt 589  Q
    ||||||||||||||||||||| ||||||||||||||    
T  19133173 atatataacaaatagataagaataaattcaaatatt 19133208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 559 - 598
Target Start/End: Original strand, 27912913 - 27912952
Alignment:
Q  559 taacaaatagataagagtaaattcaaatattcaaacaaaa 598  Q
    ||||||||||||||||||||||||||||||| ||| ||||    
T  27912913 taacaaatagataagagtaaattcaaatattaaaataaaa 27912952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 547 - 598
Target Start/End: Complemental strand, 39809312 - 39809261
Alignment:
Q  547 aaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaaa 598  Q
    ||||| || ||||| |||||||||||||||||||||||||||| ||| ||||    
T  39809312 aaatagcacatatatcaaatagataagagtaaattcaaatattaaaaaaaaa 39809261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 547 - 598
Target Start/End: Complemental strand, 40301848 - 40301797
Alignment:
Q  547 aaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaaa 598  Q
    ||||| || |||| ||||||||||||||||||||||||||||| ||| ||||    
T  40301848 aaatagcacatatgacaaatagataagagtaaattcaaatattaaaataaaa 40301797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 539 - 602
Target Start/End: Original strand, 42651709 - 42651772
Alignment:
Q  539 ttcaattcaaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaaatgta 602  Q
    ||||||||||||| ||||| |||||| || |||||| |||||| ||||||| ||| ||||||||    
T  42651709 ttcaattcaaataacatatgtaacaagtaaataagaataaatttaaatatttaaaaaaaatgta 42651772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 960300 - 960342
Alignment:
Q  10 aagaatataacaaatataatataaattcttatctttttgaatg 52  Q
    |||||||||||||||||  ||||||||||||||||||| ||||    
T  960300 aagaatataacaaatattgtataaattcttatcttttttaatg 960342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 13 - 47
Target Start/End: Complemental strand, 1071731 - 1071697
Alignment:
Q  13 aatataacaaatataatataaattcttatcttttt 47  Q
    ||||||||||||||||||||||||||||| |||||    
T  1071731 aatataacaaatataatataaattcttattttttt 1071697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 3752474 - 3752516
Alignment:
Q  13 aatataacaaatataatataaattcttatctttttgaatgaca 55  Q
    |||||| ||||| |||||||||||||||||||||| |||||||    
T  3752474 aatatagcaaatgtaatataaattcttatctttttaaatgaca 3752516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 539 - 589
Target Start/End: Original strand, 15248974 - 15249024
Alignment:
Q  539 ttcaattcaaatatcatatataacaaatagataagagtaaattcaaatatt 589  Q
    |||||| |||||| || ||||||||||||||||||| |||||| |||||||    
T  15248974 ttcaatacaaataacacatataacaaatagataagaataaatttaaatatt 15249024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 21 - 55
Target Start/End: Complemental strand, 27649274 - 27649240
Alignment:
Q  21 aaatataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||||| |||||||    
T  27649274 aaatataatataaattcttatctttttcaatgaca 27649240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 539 - 589
Target Start/End: Original strand, 29462611 - 29462661
Alignment:
Q  539 ttcaattcaaatatcatatataacaaatagataagagtaaattcaaatatt 589  Q
    ||||||||||||| ||||| ||| |||||||||||| |||||| |||||||    
T  29462611 ttcaattcaaataacatatgtaagaaatagataagaataaatttaaatatt 29462661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 17 - 47
Target Start/End: Complemental strand, 31054351 - 31054321
Alignment:
Q  17 taacaaatataatataaattcttatcttttt 47  Q
    |||||||||||||||||||||||||||||||    
T  31054351 taacaaatataatataaattcttatcttttt 31054321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 33201309 - 33201267
Alignment:
Q  13 aatataacaaatataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||| ||||||||||| || |||||||||    
T  33201309 aatataacaaatataatacaaattcttatcgttctgaatgaca 33201267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 13 - 51
Target Start/End: Original strand, 37242075 - 37242113
Alignment:
Q  13 aatataacaaatataatataaattcttatctttttgaat 51  Q
    ||||||| |||||||| ||||||||||||||||||||||    
T  37242075 aatataaaaaatataacataaattcttatctttttgaat 37242113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 13 - 47
Target Start/End: Original strand, 40303020 - 40303054
Alignment:
Q  13 aatataacaaatataatataaattcttatcttttt 47  Q
    |||||||||||||||||| ||||||||||||||||    
T  40303020 aatataacaaatataataaaaattcttatcttttt 40303054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 2001238 - 2001197
Alignment:
Q  14 atataacaaatataatataaattcttatctttttgaatgaca 55  Q
    |||||| |||||||||||||||||||| |||||| |||||||    
T  2001238 atataaaaaatataatataaattcttaactttttaaatgaca 2001197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 50
Target Start/End: Original strand, 14750408 - 14750441
Alignment:
Q  17 taacaaatataatataaattcttatctttttgaa 50  Q
    ||||||||||||||||||||||||| ||||||||    
T  14750408 taacaaatataatataaattcttatatttttgaa 14750441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 54
Target Start/End: Original strand, 25637641 - 25637678
Alignment:
Q  17 taacaaatataatataaattcttatctttttgaatgac 54  Q
    ||||||||||||||||||||||||||||| | ||||||    
T  25637641 taacaaatataatataaattcttatctttgtaaatgac 25637678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 50
Target Start/End: Complemental strand, 27158757 - 27158720
Alignment:
Q  13 aatataacaaatataatataaattcttatctttttgaa 50  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  27158757 aatataacaactataatataaattcttatcgttttgaa 27158720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 539 - 596
Target Start/End: Complemental strand, 33134963 - 33134906
Alignment:
Q  539 ttcaattcaaatatcatatataacaaatagataagagtaaattcaaatattcaaacaa 596  Q
    |||||| |||||| || ||||||||||| ||||||| |||||| ||||||| ||||||    
T  33134963 ttcaatacaaataacacatataacaaatggataagaataaatttaaatattaaaacaa 33134906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 44019486 - 44019445
Alignment:
Q  14 atataacaaatataatataaattcttatctttttgaatgaca 55  Q
    |||||| ||||||||||||||||||||| ||||| |||||||    
T  44019486 atataataaatataatataaattcttattttttttaatgaca 44019445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 668546 - 668514
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  668546 atataatataaattcttatctttttaaatgaca 668514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 558 - 602
Target Start/End: Complemental strand, 740950 - 740906
Alignment:
Q  558 ataacaaatagataagagtaaattcaaatattcaaacaaaatgta 602  Q
    |||||| ||||||||||||||||||||||||| ||| ||| ||||    
T  740950 ataacacatagataagagtaaattcaaatatttaaaaaaattgta 740906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 1117851 - 1117883
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  1117851 atataatataaattcttatctttttaaatgaca 1117883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 1995620 - 1995588
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||||| ||||    
T  1995620 atataatataaattcttatctttttgaaagaca 1995588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 3079541 - 3079573
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  3079541 atataatataaattcttatctttttaaatgaca 3079573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 556 - 588
Target Start/End: Complemental strand, 3171679 - 3171647
Alignment:
Q  556 atataacaaatagataagagtaaattcaaatat 588  Q
    |||||||||||| ||||||||||||||||||||    
T  3171679 atataacaaataaataagagtaaattcaaatat 3171647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 3708031 - 3708063
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||||| ||||    
T  3708031 atataatataaattcttatctttttgaaagaca 3708063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 6345415 - 6345383
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||||| ||||    
T  6345415 atataatataaattcttatctttttgaaagaca 6345383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 9799819 - 9799787
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    |||||| ||||||||||||||||||||||||||    
T  9799819 atataacataaattcttatctttttgaatgaca 9799787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 11869385 - 11869353
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||||| ||||    
T  11869385 atataatataaattcttatctttttgaaagaca 11869353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 13552153 - 13552121
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  13552153 atataatataaattcttatctttttaaatgaca 13552121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 14325892 - 14325860
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||||| ||||    
T  14325892 atataatataaattcttatctttttgaaagaca 14325860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 16573912 - 16573872
Alignment:
Q  13 aatataacaaatataatataaattcttatctttttgaatga 53  Q
    |||||| ||||||||||||||||| ||||| ||||||||||    
T  16573912 aatatatcaaatataatataaatttttatcattttgaatga 16573872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 546 - 598
Target Start/End: Complemental strand, 21566084 - 21566032
Alignment:
Q  546 caaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaaa 598  Q
    |||||| || |||||||||||| |||| |||||||||||||||| ||| ||||    
T  21566084 caaataacacatataacaaataaataatagtaaattcaaatattaaaataaaa 21566032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 22077982 - 22078014
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  22077982 atataatataaattcttatctttttaaatgaca 22078014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 546 - 598
Target Start/End: Complemental strand, 25915429 - 25915377
Alignment:
Q  546 caaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaaa 598  Q
    |||||| || |||||| |||||||||||| |||||||||||||| ||| ||||    
T  25915429 caaataacacatataataaatagataagaataaattcaaatattaaaataaaa 25915377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 28499894 - 28499926
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||||| ||||    
T  28499894 atataatataaattcttatctttttgaaagaca 28499926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 32292233 - 32292265
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  32292233 atataatataaattcttatctttttaaatgaca 32292265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 35287901 - 35287869
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||||| ||||    
T  35287901 atataatataaattcttatctttttgaaagaca 35287869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 35360778 - 35360746
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||||| ||||    
T  35360778 atataatataaattcttatctttttgaaagaca 35360746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 38709530 - 38709562
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  38709530 atataatataaattcttatctttttaaatgaca 38709562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 38878963 - 38878995
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  38878963 atataatataaattcttatctttttaaatgaca 38878995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 40202054 - 40202086
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  40202054 atataatataaattcttatctttttaaatgaca 40202086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 41452657 - 41452689
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  41452657 atataatataaattcttatctttttaaatgaca 41452689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1017 (Bit Score: 45; Significance: 3e-16; HSPs: 2)
Name: scaffold1017
Description:

Target: scaffold1017; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 509 - 648
Target Start/End: Complemental strand, 2515 - 2375
Alignment:
Q  509 ctttttctccttcgaaaatcatcatcatcattcaattcaaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaaatgtatcctat 608  Q
    ||||||||||||  ||||| | | |||||  ||||| |||||| || ||||||||||||||||| | ||||| |||||||| |||||||||||| |  ||    
T  2515 ctttttctcctttcaaaattaccctcatctctcaatacaaataacacatataacaaatagataaaaataaatacaaatattaaaacaaaatgtaacaaat 2416  T
Q  609 tttatatgtctga-atttttcattatcatttaaaaaagata 648  Q
    |  ||||||| ||  |||||| |||||||||||||||||||    
T  2415 tgcatatgtccgatttttttccttatcatttaaaaaagata 2375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1017; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 13 - 47
Target Start/End: Original strand, 2039 - 2073
Alignment:
Q  13 aatataacaaatataatataaattcttatcttttt 47  Q
    |||||||||||||||||| ||||||||||||||||    
T  2039 aatataacaaatataataaaaattcttatcttttt 2073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 540 - 643
Target Start/End: Original strand, 101338 - 101441
Alignment:
Q  540 tcaattcaaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaaatgtatcctattttatatgtctgaatttttcattatcattta 639  Q
    ||||| |||||| || ||||||||||||||||| |||||||||||||||  ||| |||||||| |  ||| ||||||| ||| |||||| ||||||| ||    
T  101338 tcaatacaaataacacatataacaaatagataatagtaaattcaaatatctaaataaaatgtaacaaattatatatgtttgattttttccttatcatcta 101437  T
Q  640 aaaa 643  Q
    ||||    
T  101438 aaaa 101441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 539 - 598
Target Start/End: Complemental strand, 13240953 - 13240894
Alignment:
Q  539 ttcaattcaaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaaa 598  Q
    |||||| |||||| ||||||||||||||||||||||||||||||||||||| ||| ||||    
T  13240953 ttcaatacaaataacatatataacaaatagataagagtaaattcaaatattaaaataaaa 13240894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 475 - 598
Target Start/End: Original strand, 23124191 - 23124314
Alignment:
Q  475 aagaaaataacatcttttgattcttttgaactgtctttttctccttcgaaaatcatcatcatcattcaattcaaatatcatatataacaaatagataaga 574  Q
    ||||||||||||| ||||| ||||||||   || ||||||||| ||| ||||| | | | |   |||||| |||||| || |||||||||||||||||||    
T  23124191 aagaaaataacatgttttggttcttttgggatgactttttctctttccaaaattacccttaattttcaatacaaatagcacatataacaaatagataaga 23124290  T
Q  575 gtaaattcaaatattcaaacaaaa 598  Q
    ||||||||||||||| ||| ||||    
T  23124291 gtaaattcaaatattgaaataaaa 23124314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 8866864 - 8866906
Alignment:
Q  13 aatataacaaatataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  8866864 aatataacaaatataatataaattcttatcttttttaatgaca 8866906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 32279611 - 32279653
Alignment:
Q  13 aatataacaaatataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  32279611 aatataacaaatataatataaattcttatcttttttaatgaca 32279653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 546 - 589
Target Start/End: Complemental strand, 26306499 - 26306456
Alignment:
Q  546 caaatatcatatataacaaatagataagagtaaattcaaatatt 589  Q
    |||||| || ||||||||||||||||||||||||||||||||||    
T  26306499 caaataacaaatataacaaatagataagagtaaattcaaatatt 26306456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 509 - 598
Target Start/End: Complemental strand, 9894685 - 9894596
Alignment:
Q  509 ctttttctccttcgaaaatcatcatcatcattcaattcaaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaaa 598  Q
    ||||||||| ||| ||||| | | ||| | |||||| ||| ||||| |||||| |||||||||| |||||||||||||||| ||| ||||    
T  9894685 ctttttctctttcaaaaattaccctcaactttcaatacaactatcacatataagaaatagataaaagtaaattcaaatattaaaataaaa 9894596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 541 - 597
Target Start/End: Original strand, 2441258 - 2441314
Alignment:
Q  541 caattcaaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaa 597  Q
    |||| |||||| |||||||||||||||||||| | |||||| ||||||| |||||||    
T  2441258 caatacaaataacatatataacaaatagataataataaatttaaatattaaaacaaa 2441314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 556 - 596
Target Start/End: Complemental strand, 14912301 - 14912261
Alignment:
Q  556 atataacaaatagataagagtaaattcaaatattcaaacaa 596  Q
    |||||| ||||||||||||||||||||||||||| ||||||    
T  14912301 atataataaatagataagagtaaattcaaatattaaaacaa 14912261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 29729665 - 29729701
Alignment:
Q  17 taacaaatataatataaattcttatctttttgaatga 53  Q
    ||||||||||||||||||||||||||||||| |||||    
T  29729665 taacaaatataatataaattcttatcttttttaatga 29729701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 539 - 598
Target Start/End: Original strand, 14426430 - 14426489
Alignment:
Q  539 ttcaattcaaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaaa 598  Q
    |||||| |||||| || || ||||||||||||||||||||||||| ||||| ||| ||||    
T  14426430 ttcaatacaaataacacatgtaacaaatagataagagtaaattcatatattaaaataaaa 14426489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 539 - 598
Target Start/End: Original strand, 17942293 - 17942352
Alignment:
Q  539 ttcaattcaaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaaa 598  Q
    |||||| |||||| || |||||| |||||||||||||| |||||||||||| ||| ||||    
T  17942293 ttcaatacaaataacaaatataataaatagataagagtgaattcaaatattaaaataaaa 17942352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 13 - 47
Target Start/End: Original strand, 4578010 - 4578044
Alignment:
Q  13 aatataacaaatataatataaattcttatcttttt 47  Q
    |||||| ||||||||||||||||||||||||||||    
T  4578010 aatatagcaaatataatataaattcttatcttttt 4578044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 13 - 47
Target Start/End: Original strand, 15926177 - 15926211
Alignment:
Q  13 aatataacaaatataatataaattcttatcttttt 47  Q
    |||||||||||||||||| ||||||||||||||||    
T  15926177 aatataacaaatataataaaaattcttatcttttt 15926211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 13 - 47
Target Start/End: Original strand, 32570377 - 32570411
Alignment:
Q  13 aatataacaaatataatataaattcttatcttttt 47  Q
    |||||| ||||||||||||||||||||||||||||    
T  32570377 aatatagcaaatataatataaattcttatcttttt 32570411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 33007785 - 33007743
Alignment:
Q  13 aatataacaaatataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||  ||||||| ||||||||||    
T  33007785 aatataacaaatataatataaatctttatcttgttgaatgaca 33007743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 13 - 47
Target Start/End: Original strand, 34806414 - 34806448
Alignment:
Q  13 aatataacaaatataatataaattcttatcttttt 47  Q
    |||||||||| ||||||||||||||||||||||||    
T  34806414 aatataacaactataatataaattcttatcttttt 34806448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 50
Target Start/End: Original strand, 1930785 - 1930818
Alignment:
Q  17 taacaaatataatataaattcttatctttttgaa 50  Q
    ||||||||||||||||||||||||| ||||||||    
T  1930785 taacaaatataatataaattcttatatttttgaa 1930818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 50
Target Start/End: Complemental strand, 3054421 - 3054388
Alignment:
Q  17 taacaaatataatataaattcttatctttttgaa 50  Q
    ||||||||||||||||||||||||| ||||||||    
T  3054421 taacaaatataatataaattcttatatttttgaa 3054388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 55
Target Start/End: Original strand, 8872564 - 8872597
Alignment:
Q  22 aatataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||| |||||||    
T  8872564 aatataatataaattcttatcttttttaatgaca 8872597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 28219525 - 28219488
Alignment:
Q  19 acaaatataatataaattcttatctttttgaatgacaa 56  Q
    ||||||||||||||||||||||||||||  ||||||||    
T  28219525 acaaatataatataaattcttatcttttgcaatgacaa 28219488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 173313 - 173281
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  173313 atataatataaattcttatctttttaaatgaca 173281  T

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Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 246997 - 247029
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||||| ||||    
T  246997 atataatataaattcttatctttttgaaagaca 247029  T

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Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 6018824 - 6018792
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  6018824 atataatataaattcttatctttttaaatgaca 6018792  T

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Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 7540930 - 7540962
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    ||||||||||||||||||||||||| |||||||    
T  7540930 atataatataaattcttatctttttaaatgaca 7540962  T

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Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 12582952 - 12582920
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||||| ||||    
T  12582952 atataatataaattcttatctttttgaaagaca 12582920  T

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Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 13459415 - 13459383
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||||| ||||    
T  13459415 atataatataaattcttatctttttgaaagaca 13459383  T

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Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 546 - 598
Target Start/End: Original strand, 17829620 - 17829672
Alignment:
Q  546 caaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaaa 598  Q
    |||||| || ||||||||||||||||| | |||||||||||||| ||| ||||    
T  17829620 caaataacacatataacaaatagataaaaataaattcaaatattaaaataaaa 17829672  T

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Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 28231666 - 28231634
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||||| ||||    
T  28231666 atataatataaattcttatctttttgaaagaca 28231634  T

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Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 545 - 589
Target Start/End: Original strand, 30591104 - 30591148
Alignment:
Q  545 tcaaatatcatatataacaaatagataagagtaaattcaaatatt 589  Q
    ||||||| || |||||||||||| |||| ||||||||||||||||    
T  30591104 tcaaataacacatataacaaataaataaaagtaaattcaaatatt 30591148  T

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Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 34318766 - 34318798
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||||| ||||    
T  34318766 atataatataaattcttatctttttgaaagaca 34318798  T

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Target: scaffold0047 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 65595 - 65555
Alignment:
Q  13 aatataacaaatataatataaattcttatctttttgaatga 53  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  65595 aatataacaaatataatataaattcttatctttttgaatga 65555  T

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Target: scaffold0154 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 510 - 598
Target Start/End: Complemental strand, 32897 - 32809
Alignment:
Q  510 tttttctccttcgaaaatcatcatcatcattcaattcaaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaaa 598  Q
    |||| ||| ||| ||||| | ||||| | |||||| |||||| || |||||| ||||||||||||||||||||||||||| ||| ||||    
T  32897 ttttactctttctaaaattaccatcaactttcaatacaaataacacatataataaatagataagagtaaattcaaatattaaaataaaa 32809  T

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Target: scaffold0128 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 475 - 598
Target Start/End: Complemental strand, 43431 - 43308
Alignment:
Q  475 aagaaaataacatcttttgattcttttgaactgtctttttctccttcgaaaatcatcatcatcattcaattcaaatatcatatataacaaatagataaga 574  Q
    |||||||||  || |||||  ||||||| |||| ||||||| | ||| ||||| | ||| | | |||||| |||||| |  |||||||||||| ||||||    
T  43431 aagaaaatagaatgttttgtctcttttgcactgactttttccctttccaaaattaccataaactttcaatgcaaataacgcatataacaaataaataaga 43332  T
Q  575 gtaaattcaaatattcaaacaaaa 598  Q
    ||||||||||||||| ||| ||||    
T  43331 gtaaattcaaatattaaaataaaa 43308  T

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Target: scaffold0092 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 558 - 648
Target Start/End: Original strand, 6515 - 6606
Alignment:
Q  558 ataacaaatagataagagtaaattcaaatattcaaacaaaatgtatcctattttatatgtctga-atttttcattatcatttaaaaaagata 648  Q
    ||||||||| | |||||||||||||||||||| |||||||||||  |  | | ||||||||  |  ||||||||||||||||||||||||||    
T  6515 ataacaaatgggtaagagtaaattcaaatattaaaacaaaatgttacgaaatgtatatgtcaaatttttttcattatcatttaaaaaagata 6606  T

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Target: scaffold0734 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 539 - 602
Target Start/End: Complemental strand, 4263 - 4200
Alignment:
Q  539 ttcaattcaaatatcatatataacaaatagataagagtaaattcaaatattcaaacaaaatgta 602  Q
    |||||| |||||| || ||||||||||||||||||| |||||| ||||||| ||| ||| ||||    
T  4263 ttcaatacaaataacacatataacaaatagataagaataaatttaaatattaaaataaagtgta 4200  T

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Target: scaffold0035 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 17 - 47
Target Start/End: Complemental strand, 81895 - 81865
Alignment:
Q  17 taacaaatataatataaattcttatcttttt 47  Q
    |||||||||||||||||||||||||||||||    
T  81895 taacaaatataatataaattcttatcttttt 81865  T

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Target: scaffold0018 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 13 - 47
Target Start/End: Complemental strand, 36864 - 36830
Alignment:
Q  13 aatataacaaatataatataaattcttatcttttt 47  Q
    |||||||||||||||||| ||||||||||||||||    
T  36864 aatataacaaatataataaaaattcttatcttttt 36830  T

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Target: scaffold0009 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 53765 - 53727
Alignment:
Q  18 aacaaatataatataaattcttatctttttgaatgacaa 56  Q
    ||||||||||||||||||| |||||||||| ||||||||    
T  53765 aacaaatataatataaatttttatcttttttaatgacaa 53727  T

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Target: scaffold1777 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1777
Description:

Target: scaffold1777; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 47
Target Start/End: Complemental strand, 648 - 615
Alignment:
Q  14 atataacaaatataatataaattcttatcttttt 47  Q
    |||||||||||||||||||||||||||| |||||    
T  648 atataacaaatataatataaattcttatattttt 615  T

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Target: scaffold0038 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 20023 - 19986
Alignment:
Q  19 acaaatataatataaattcttatctttttgaatgacaa 56  Q
    ||||||||||||||||||||||||||||  ||||||||    
T  20023 acaaatataatataaattcttatcttttgcaatgacaa 19986  T

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Target: scaffold0038; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 32163 - 32131
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||||| ||||    
T  32163 atataatataaattcttatctttttgaaagaca 32131  T

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Target: scaffold0283 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 9218 - 9250
Alignment:
Q  23 atataatataaattcttatctttttgaatgaca 55  Q
    |||||||||||||||||||||||||||| ||||    
T  9218 atataatataaattcttatctttttgaaagaca 9250  T

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Target: scaffold0078 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 51
Target Start/End: Complemental strand, 5897 - 5869
Alignment:
Q  23 atataatataaattcttatctttttgaat 51  Q
    |||||||||||||||||||||||||||||    
T  5897 atataatataaattcttatctttttgaat 5869  T

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Target: scaffold0068 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 558 - 598
Target Start/End: Complemental strand, 57335 - 57295
Alignment:
Q  558 ataacaaatagataagagtaaattcaaatattcaaacaaaa 598  Q
    ||||||||||||||| | |||||||||||||| ||||||||    
T  57335 ataacaaatagataataataaattcaaatatttaaacaaaa 57295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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