View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4094_low_42 (Length: 244)
Name: NF4094_low_42
Description: NF4094
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4094_low_42 |
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Alignment Details
Target: chr1 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 6 - 228
Target Start/End: Original strand, 52473057 - 52473279
Alignment:
| Q |
6 |
tctttactttcctagtagttatcccatttttcccccggtttgttcttgaggatactctatttgactgactccatacaaggtttagtcttgacagaaaacc |
105 |
Q |
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| T |
52473057 |
tctttactttcctagtagttatcccatttttcctccggtttgttcttgaggatactctatttgaatgactccatacaaggtttagtcttgacagaaaacc |
52473156 |
T |
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| Q |
106 |
caggtctaatcttggcagaaaccccttttttggaacaacctgttgtatggaaatctacaccgttggaaaaaagtttgtcccagaaacataataaggatta |
205 |
Q |
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| T |
52473157 |
caggtctaatcttggcagaaaccccttttttggaacaacctgttgtatggaaatctacaccgttggaaaaaagtttgtcccagaaacataataaggatta |
52473256 |
T |
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| Q |
206 |
tttcaccaaatcattgctgttaa |
228 |
Q |
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| T |
52473257 |
tttcaccaaatcattgctgttaa |
52473279 |
T |
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