View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4094_low_43 (Length: 243)
Name: NF4094_low_43
Description: NF4094
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4094_low_43 |
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Alignment Details
Target: chr6 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 6161883 - 6161655
Alignment:
| Q |
1 |
cgctcaagttcattaaatcacacctacctaacaaatacaatgattagagagatgcgtctaatcctatacttttcaaaatcttgaaattatctagccaatc |
100 |
Q |
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| T |
6161883 |
cgctcaagttcattaaatcacacctacctaacaaatacaatgattagagagatgcgtctaatcctatacttttcaaaatcttgaaattatctagccattc |
6161784 |
T |
|
| Q |
101 |
aacatatataaaaactcaatctaaccattgcagaccagtgaattatttgcccaatgggctaagataaagataagactactgggatgatgaaaagagaaag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6161783 |
aacatatataaaaactcaatctaaccattgcagaccagtgaattatttgcccaatgggctaagataaagataagactactgggatgatgaaaagagaaag |
6161684 |
T |
|
| Q |
201 |
atg--ataccgattttgaaagctttttaa |
227 |
Q |
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||| ||||||||||||||| |||||||| |
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| T |
6161683 |
atgatataccgattttgaaaactttttaa |
6161655 |
T |
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