View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4095_high_2 (Length: 467)

Name: NF4095_high_2
Description: NF4095
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4095_high_2
NF4095_high_2
[»] chr2 (4 HSPs)
chr2 (11-449)||(13112104-13112546)
chr2 (335-438)||(18038644-18038748)
chr2 (110-205)||(42256342-42256437)
chr2 (356-438)||(27483842-27483924)
[»] chr4 (9 HSPs)
chr4 (14-171)||(23865971-23866132)
chr4 (14-172)||(12236182-12236344)
chr4 (336-399)||(4415369-4415432)
chr4 (16-164)||(12191080-12191231)
chr4 (107-161)||(17651271-17651325)
chr4 (380-438)||(19053571-19053629)
chr4 (347-412)||(13977063-13977128)
chr4 (14-54)||(12606467-12606507)
chr4 (22-54)||(27940853-27940885)
[»] chr1 (9 HSPs)
chr1 (14-183)||(35896036-35896209)
chr1 (307-438)||(19227727-19227859)
chr1 (18-195)||(19960225-19960404)
chr1 (341-449)||(35896408-35896516)
chr1 (14-177)||(29076822-29076989)
chr1 (34-151)||(20619698-20619819)
chr1 (94-189)||(1616312-1616407)
chr1 (102-205)||(17316345-17316448)
chr1 (110-151)||(12893277-12893318)
[»] scaffold0329 (2 HSPs)
scaffold0329 (334-436)||(4612-4714)
scaffold0329 (18-164)||(4286-4434)
[»] chr8 (6 HSPs)
chr8 (22-218)||(33925453-33925653)
chr8 (110-203)||(23584864-23584957)
chr8 (335-438)||(19712014-19712117)
chr8 (110-173)||(26576672-26576735)
chr8 (110-160)||(34062327-34062377)
chr8 (113-161)||(25724657-25724705)
[»] chr7 (7 HSPs)
chr7 (335-438)||(28981498-28981600)
chr7 (72-195)||(28981216-28981335)
chr7 (113-179)||(1767589-1767656)
chr7 (11-65)||(1767483-1767537)
chr7 (116-172)||(7560993-7561049)
chr7 (128-164)||(20095117-20095153)
chr7 (335-379)||(20095352-20095396)
[»] chr5 (5 HSPs)
chr5 (14-179)||(37390211-37390380)
chr5 (89-189)||(36740351-36740452)
chr5 (325-421)||(16791528-16791624)
chr5 (20-54)||(16791189-16791223)
chr5 (333-399)||(37390556-37390622)
[»] chr3 (8 HSPs)
chr3 (334-438)||(5797951-5798055)
chr3 (11-160)||(31779589-31779742)
chr3 (110-161)||(14427215-14427266)
chr3 (14-53)||(5798272-5798311)
chr3 (111-161)||(13291681-13291731)
chr3 (12-54)||(42250833-42250875)
chr3 (14-51)||(17034556-17034593)
chr3 (343-435)||(31375342-31375434)
[»] scaffold0485 (1 HSPs)
scaffold0485 (112-164)||(8901-8953)
[»] scaffold0217 (1 HSPs)
scaffold0217 (15-172)||(6862-7024)
[»] chr6 (3 HSPs)
chr6 (14-54)||(19692026-19692066)
chr6 (333-416)||(24576083-24576166)
chr6 (110-160)||(21747115-21747165)


Alignment Details
Target: chr2 (Bit Score: 358; Significance: 0; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 358; E-Value: 0
Query Start/End: Original strand, 11 - 449
Target Start/End: Complemental strand, 13112546 - 13112104
Alignment:
Q  11 cagagacgttggaatgtttcctgatttggttaatgtcgttgaaatgtcattcaaagttcattt----caaaaggaattacccgttttatttcaagtgtcg 106  Q
    ||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||| |||||    
T  13112546 cagagacgttggaatattttttgatttggttaatgtcgttgaaatgtcattcaaagttcatttgcttcaaaaggaattacccgttttatttcaattgtcg 13112447  T
Q  107 ttaaagttctttgtttgtatatgcacgtggttagaagaagacaaagtgtactatctgaatctgatagtgacttcttcataagacaacaaatctaacgtgt 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  13112446 ttaaagttctttgtttgtatatgcacgtggttagaagaagacaaagtgtactatctgaatttgatagtgacttcttcataagacgacaaatctaacgtgt 13112347  T
Q  207 tctttggagtctgatagccttcagagtcttcagtcttcagatgctcctgaccttcagagtctgacttcttcatatgcttgtatcttttagatcttgctct 306  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||    
T  13112346 tctttgaagtctgatagccttcagagtcttcagtcttcagatgctccagaccttcaaagtctgacttcttcatatgcttgtatcttttagatcttggtct 13112247  T
Q  307 agaaattcagattctctcaaattttgaatgctcttgtatatgttcttctagaactaaaacttgatttaatactttaaattttagtttatggtctcgcaca 406  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  13112246 agaaattcagcttctctcaaattttgaatgctcttgtatatgttcttctagaaccaaaacttgatttaatactttaaattttagtttatggtctcccaca 13112147  T
Q  407 cttgaatatacattaatatatctaattgttctcttgatacttt 449  Q
    |||||| |||||||| |||||||||||||||| || |||||||    
T  13112146 cttgaacatacattagtatatctaattgttcttttaatacttt 13112104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 335 - 438
Target Start/End: Original strand, 18038644 - 18038748
Alignment:
Q  335 tgctcttgtatatgttcttctagaactaaaacttgatttaatac-tttaaattttagtttatggtctcgcacacttgaatatacattaatatatctaatt 433  Q
    |||||||||||||||||||| | ||| ||||||||||||||||| | ||| || ||||  |||||| |||||||||||| ||||||||  ||||| ||||    
T  18038644 tgctcttgtatatgttcttccataaccaaaacttgatttaatacatataatttctagtcaatggtcacgcacacttgaacatacattagcatatccaatt 18038743  T
Q  434 gttct 438  Q
    |||||    
T  18038744 gttct 18038748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 42256342 - 42256437
Alignment:
Q  110 aagttctttgtttgtatatgcacgtggttagaagaagacaaagtgtactatctgaatctgatagtgacttcttcataagacaacaaatctaacgtg 205  Q
    ||||||||||||||||| |||||||||||| ||||||||||| ||||||||| || |||||||  |||  ||||| || |  ||||||||||||||    
T  42256342 aagttctttgtttgtatctgcacgtggttacaagaagacaaaatgtactatcagagtctgataaagacagcttcagaaaaagacaaatctaacgtg 42256437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 356 - 438
Target Start/End: Complemental strand, 27483924 - 27483842
Alignment:
Q  356 agaactaaaacttgatttaatactttaaattttagtttatggtctcgcacacttgaatatacattaatatatctaattgttct 438  Q
    ||||| |||||||||||| | | ||  ||||| | |||||||||  ||||||||||| | ||||||||||||| |||||||||    
T  27483924 agaaccaaaacttgattttagaattagaatttaattttatggtcctgcacacttgaacacacattaatatatcaaattgttct 27483842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 3e-21; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 14 - 171
Target Start/End: Original strand, 23865971 - 23866132
Alignment:
Q  14 agacgttggaatgtttcctgatttggttaatgtcgttgaaatgtcattcaaagttcattt----caaaaggaattacccgttttatttcaagtgtcgtta 109  Q
    ||||| ||||||||||| |||| || |||||||||||  ||||||||| ||| ||| |||    ||||||||||||  ||||| ||| ||| |||| ||     
T  23865971 agacggtggaatgtttcttgatatgattaatgtcgtttgaatgtcatttaaaattcctttgcttcaaaaggaattattcgtttcattccaattgtccttg 23866070  T
Q  110 aagttctttgtttgtatatgcacgtggttagaagaagacaaagtgtactatctgaatctgat 171  Q
    ||||||||||||||| ||||||| || | |||||| |||||| |||||||||||| ||||||    
T  23866071 aagttctttgtttgtttatgcacatgatcagaagaggacaaactgtactatctgagtctgat 23866132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 172
Target Start/End: Original strand, 12236182 - 12236344
Alignment:
Q  14 agacgttggaatgtttcctgatttggttaatgtcgttgaaatgtcattcaaagttcat----ttcaaaaggaattacccgttttatttcaagtgtcgtta 109  Q
    |||||||  |||||||| ||| ||||||||||||||||||| | |||| ||| ||| |    |||||||||||||| |||||| ||||||| |||| ||     
T  12236182 agacgttcaaatgtttcttgagttggttaatgtcgttgaaaagacatttaaaattcttttgcttcaaaaggaattatccgtttcatttcaattgtccttg 12236281  T
Q  110 aagttctttgtttgtatatgcacgtggttagaagaagacaaagtgtactatctgaatctgata 172  Q
    |||||||| || ||| | | ||| || | |||||| |||||| |||| ||||| | |||||||    
T  12236282 aagttcttcgtatgtttcttcacatgatcagaagaggacaaactgtattatctaagtctgata 12236344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 336 - 399
Target Start/End: Original strand, 4415369 - 4415432
Alignment:
Q  336 gctcttgtatatgttcttctagaactaaaacttgatttaatactttaaattttagtttatggtc 399  Q
    |||||||||||| |||||  ||||  ||||||||||||||||| || ||||||||| |||||||    
T  4415369 gctcttgtatattttctttcagaatcaaaacttgatttaatacattgaattttagtctatggtc 4415432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 164
Target Start/End: Original strand, 12191080 - 12191231
Alignment:
Q  16 acgttggaatgtttcctgatttggttaatgtcgttgaaatgtcattcaaagttcattt----caaaaggaattacccgttttatttcaagtgtcgttaaa 111  Q
    |||||||||| |||| ||||||||||||||| |||| || | ||||  || ||| |||    |||||||||||| | |||  ||  ||| |||| || ||    
T  12191080 acgttggaatatttcttgatttggttaatgttgttggaacgacatttgaaattcctttgcttcaaaaggaattatctgttcaatc-caattgtctttgaa 12191178  T
Q  112 gttctttgtttgtatatgcacgtggttagaagaagacaaagtgtactatctga 164  Q
    ||||||| | ||| | ||||| |||||| ||||||||||||||||||||||||    
T  12191179 gttctttttctgtttctgcacatggttacaagaagacaaagtgtactatctga 12191231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 107 - 161
Target Start/End: Complemental strand, 17651325 - 17651271
Alignment:
Q  107 ttaaagttctttgtttgtatatgcacgtggttagaagaagacaaagtgtactatc 161  Q
    ||||| |||| || |||| | |||||||||||||||||||||||| |||||||||    
T  17651325 ttaaatttctctgcttgtttctgcacgtggttagaagaagacaaactgtactatc 17651271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 380 - 438
Target Start/End: Original strand, 19053571 - 19053629
Alignment:
Q  380 ttaaattttagtttatggtctcgcacacttgaatatacattaatatatctaattgttct 438  Q
    |||||||||| |||||||||  ||||||||||| ||| ||||  |||||||||||||||    
T  19053571 ttaaattttaatttatggtccagcacacttgaacatatattagcatatctaattgttct 19053629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 412
Target Start/End: Complemental strand, 13977128 - 13977063
Alignment:
Q  347 tgttcttctagaactaaaacttgatttaatactttaaattttagtttatggtctcgcacacttgaa 412  Q
    |||||||  ||||| |||||||||||||||||||| ||||| | | |||||||| ||| |||||||    
T  13977128 tgttcttacagaaccaaaacttgatttaatactttgaatttaattatatggtcttgcatacttgaa 13977063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 12606467 - 12606507
Alignment:
Q  14 agacgttggaatgtttcctgatttggttaatgtcgttgaaa 54  Q
    ||||||||||||||||| ||||||| ||||||| |||||||    
T  12606467 agacgttggaatgtttcttgatttgattaatgttgttgaaa 12606507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 54
Target Start/End: Original strand, 27940853 - 27940885
Alignment:
Q  22 gaatgtttcctgatttggttaatgtcgttgaaa 54  Q
    ||||||||| |||||||||||||||||||||||    
T  27940853 gaatgtttcttgatttggttaatgtcgttgaaa 27940885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 8e-19; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 14 - 183
Target Start/End: Original strand, 35896036 - 35896209
Alignment:
Q  14 agacgttggaatgtttcctgatttggttaatgtcgttgaaatgtcattcaaagttcattt----caaaaggaattacccgttttatttcaagtgtcgtta 109  Q
    ||||||||||||||||  |||||||||||||||| |||||| |  |||  || |||||||    |||||||||||| || ||| ||| | | | || |||    
T  35896036 agacgttggaatgttttttgatttggttaatgtctttgaaaagaaatttgaaattcatttgcttcaaaaggaattatccatttcattccgattttcctta 35896135  T
Q  110 aagttctttgtttgtatatgcacgtggttagaagaagacaaagtgtactatctgaatctgatagtgacttcttc 183  Q
    ||||||||| ||||| | |||| |||||||||||| || ||| |||||||||||| ||||||| |||| |||||    
T  35896136 aagttctttatttgtttctgcatgtggttagaagaggataaactgtactatctgagtctgataatgacatcttc 35896209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 307 - 438
Target Start/End: Original strand, 19227727 - 19227859
Alignment:
Q  307 agaaattcagattctct-caaattttgaatgctcttgtatatgttcttctagaactaaaacttgatttaatactttaaattttagtttatggtctcgcac 405  Q
    |||| ||||| |||||| |||||||  |||||||||| ||||| ||||  |  || |||  |||||||||||| || |||||||||||||||||  ||||    
T  19227727 agaacttcagcttctcttcaaatttcaaatgctcttgaatatgatctttcaataccaaattttgatttaatacattgaattttagtttatggtcctgcac 19227826  T
Q  406 acttgaatatacattaatatatctaattgttct 438  Q
    ||||||| ||| |||||||||| ||||||||||    
T  19227827 acttgaacatatattaatatatttaattgttct 19227859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 195
Target Start/End: Complemental strand, 19960404 - 19960225
Alignment:
Q  18 gttggaatgtttcctgatttggttaatgtcgttgaaatgtcattcaaagttcattt----caaaaggaattacccgttttatttcaagtgtcgttaaagt 113  Q
    ||||||||||||| ||||||||||||||||||||||| | ||||  || ||| |||    ||||| ||||||   |||  ||| ||| |||| || ||||    
T  19960404 gttggaatgtttcatgatttggttaatgtcgttgaaaagacatttgaaattcctttgcttcaaaaagaattatttgttc-attccaattgtctttgaagt 19960306  T
Q  114 tctttgtttgtatatgcacgtggttagaagaagacaaagtgtactatctgaatctgatagtgacttcttcataagacaacaa 195  Q
    |||| || ||| | |||||||||| ||||||||||||||||||| |||||| |||||| ||||| |||||| ||||| ||||    
T  19960305 tctt-gtatgtttttgcacgtggtcagaagaagacaaagtgtaccatctgagtctgatggtgacatcttcagaagacgacaa 19960225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 341 - 449
Target Start/End: Original strand, 35896408 - 35896516
Alignment:
Q  341 tgtatatgttcttctagaactaaaacttgatttaatactttaaattttagtttatggtctcgcacacttgaatatacattaatatatctaattgttctct 440  Q
    |||||||||||||  || |||||||||| ||||||||| || ||||||||||| |||||   |||||||||| ||||||||| ||||  ||||||||| |    
T  35896408 tgtatatgttctttcagtactaaaactttatttaatacatttaattttagtttgtggtcctacacacttgaacatacattaacatattcaattgttcttt 35896507  T
Q  441 tgatacttt 449  Q
    | |||||||    
T  35896508 taatacttt 35896516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 14 - 177
Target Start/End: Complemental strand, 29076989 - 29076822
Alignment:
Q  14 agacgttggaatgtttcctgatttggttaatgtcgttgaaatgtcattcaaagttcat----ttcaaaaggaattacccgttttatttcaagtgtcgtta 109  Q
    ||||||||||||||||| ||||||||||||||  ||||||||||||||  || |||||    |||||| | |||||  ||||| ||||||  |||| ||     
T  29076989 agacgttggaatgtttcttgatttggttaatgatgttgaaatgtcatttgaaattcatttgcttcaaatgaaattattcgtttcatttcatttgtccttg 29076890  T
Q  110 aagttctttgtttgtatatgcacgtggttagaagaagacaaagtgtactatctgaatctgatagtgac 177  Q
    || |  ||||||||| | |||||||| ||||||||||| ||| | ||||||| || ||||||| ||||    
T  29076889 aattgttttgtttgtttctgcacgtgtttagaagaagataaattatactatcagagtctgataatgac 29076822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 34 - 151
Target Start/End: Original strand, 20619698 - 20619819
Alignment:
Q  34 atttggttaatgtcgttgaaatgtcattcaaagttcattt----caaaaggaattacccgttttatttcaagtgtcgttaaagttctttgtttgtatatg 129  Q
    |||||||||||||| |||||| ||||||  || |||||||    ||||   ||||| | |||||||||||| |||| || ||||||||||||||| | ||    
T  20619698 atttggttaatgtcattgaaaggtcattttaaattcatttttttcaaattaaattatctgttttatttcaattgtctttgaagttctttgtttgtttctg 20619797  T
Q  130 cacgtggttagaagaagacaaa 151  Q
    ||||| || |||||| ||||||    
T  20619798 cacgtagtcagaagaggacaaa 20619819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 189
Target Start/End: Complemental strand, 1616407 - 1616312
Alignment:
Q  94 atttcaagtgtcgttaaagttctttgtttgtatatgcacgtggttagaagaagacaaagtgtactatctgaatctgatagtgacttcttcataaga 189  Q
    ||||||| |||| || || |||||||||||| | ||||| |||| |||||| |  ||| ||| |||||||| |||||||||||| |||||| ||||    
T  1616407 atttcaattgtccttgaaattctttgtttgtttgtgcacatggtcagaagagggtaaactgtgctatctgagtctgatagtgacctcttcagaaga 1616312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 205
Target Start/End: Complemental strand, 17316448 - 17316345
Alignment:
Q  102 tgtcgttaaagttctttgtttgtatatgcacgtggttagaagaagacaaagtgtactatctgaatctgatagtgacttcttcataagacaacaaatctaa 201  Q
    |||| ||||||||| |||||||| | | ||| |||| ||||||||||||| ||||||||| || | |||||| |||  || |||||||  |||||||| |    
T  17316448 tgtccttaaagttccttgtttgtttctacacatggtcagaagaagacaaattgtactatcagactttgatagagacaactacataagaagacaaatctga 17316349  T
Q  202 cgtg 205  Q
    ||||    
T  17316348 cgtg 17316345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 151
Target Start/End: Complemental strand, 12893318 - 12893277
Alignment:
Q  110 aagttctttgtttgtatatgcacgtggttagaagaagacaaa 151  Q
    ||||||||||||||| | | ||||||||||||||||||||||    
T  12893318 aagttctttgtttgtttctacacgtggttagaagaagacaaa 12893277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0329 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0329
Description:

Target: scaffold0329; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 334 - 436
Target Start/End: Original strand, 4612 - 4714
Alignment:
Q  334 atgctcttgtatatgttcttctagaactaaaacttgatttaatactttaaattttagtttatggtctcgcacacttgaatatacattaatatatctaatt 433  Q
    |||||||||||||  || ||||||||| ||||||||| |||||||| | ||||||||| |||||||  ||||||||||| ||| ||||  ||||| ||||    
T  4612 atgctcttgtatacatttttctagaacgaaaacttgacttaatactatgaattttagtatatggtcctgcacacttgaaaatatattagcatatccaatt 4711  T
Q  434 gtt 436  Q
    |||    
T  4712 gtt 4714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0329; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 164
Target Start/End: Original strand, 4286 - 4434
Alignment:
Q  18 gttggaatgtttcctgatttggttaatgtcgttgaaatgtcattcaaagttcattt----caaaaggaattacccgttttatttcaagtgtcgttaaagt 113  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||  || ||| |||     | ||||||||| ||| || ||| ||  |||| || ||||    
T  4286 gttggaatgtttcttgatttggttaatgtcgttgaaaagtcatttgaaattcctttgttgaacaaggaattatccg-ttcattccatttgtccttgaagt 4384  T
Q  114 tctttgtttgtatatgcacgtggttagaagaagacaaagtgtactatctga 164  Q
    || |||||||||| |||||||| | ||||||||||||| | ||||||||||    
T  4385 tc-ttgtttgtatctgcacgtgatcagaagaagacaaaatatactatctga 4434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 22 - 218
Target Start/End: Complemental strand, 33925653 - 33925453
Alignment:
Q  22 gaatgtttcctgatttggttaatgtcgttgaaatgtcattc-aaagttcatt---tcaaaaggaattacccgttttatttcaagtgtcgttaaagttctt 117  Q
    ||||||||| ||||||||||||||||||||||| |  |||  ||| ||| ||   |||||| |||||| || ||| ||||||  |||| || ||||||||    
T  33925653 gaatgtttcttgatttggttaatgtcgttgaaaagatatttgaaatttctttgcttcaaaatgaattatccatttcatttcatttgtctttgaagttctt 33925554  T
Q  118 tgtttgtatatgcacgtggttagaagaagacaaagtgtactatctgaatctgatagtgacttcttcataagacaacaaatctaacgtgttctttggagtc 217  Q
    |||||||   |||||||||| ||||||| | ||| |||||  ||| | |||||||||||| |||||| ||||| | || | | ||||||||||| |||||    
T  33925553 tgtttgttcctgcacgtggtcagaagaaaaaaaaatgtaccgtctcagtctgatagtgacatcttcagaagacgataagtttgacgtgttctttagagtc 33925454  T
Q  218 t 218  Q
    |    
T  33925453 t 33925453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 110 - 203
Target Start/End: Complemental strand, 23584957 - 23584864
Alignment:
Q  110 aagttctttgtttgtatatgcacgtggttagaagaagacaaagtgtactatctgaatctgatagtgacttcttcataagacaacaaatctaacg 203  Q
    ||||||||||||||| ||| |||||||| |||| |||||||||||||||||| || | |||||| |||  || || ||||  ||||||||||||    
T  23584957 aagttctttgtttgtttatacacgtggtcagaataagacaaagtgtactatcagactttgatagagacagctacaaaagaagacaaatctaacg 23584864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 438
Target Start/End: Complemental strand, 19712117 - 19712014
Alignment:
Q  335 tgctcttgtatatgttcttctagaactaaaacttgatttaatactttaaattttagtttatggtctcgcacacttgaatatacattaatatatctaattg 434  Q
    |||| ||||||| ||||||| || |  | ||||||| || |||| || | ||||||| |||||||| ||| ||||||| ||| ||||| |||||||||||    
T  19712117 tgctattgtatacgttcttcaagtatcagaacttgaatttatacattgagttttagtgtatggtcttgcatacttgaacatatattaacatatctaattg 19712018  T
Q  435 ttct 438  Q
    ||||    
T  19712017 ttct 19712014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 26576672 - 26576735
Alignment:
Q  110 aagttctttgtttgtatatgcacgtggttagaagaagacaaagtgtactatctgaatctgatag 173  Q
    ||||||||||||||||| |||||| | ||||||||||| ||| ||||||||  || ||||||||    
T  26576672 aagttctttgtttgtatctgcacgagattagaagaagaaaaattgtactattggagtctgatag 26576735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 34062377 - 34062327
Alignment:
Q  110 aagttctttgtttgtatatgcacgtggttagaagaagacaaagtgtactat 160  Q
    ||||||||||||||| | |||||||||| | ||||||||||| ||||||||    
T  34062377 aagttctttgtttgtttctgcacgtggtcacaagaagacaaattgtactat 34062327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 113 - 161
Target Start/End: Complemental strand, 25724705 - 25724657
Alignment:
Q  113 ttctttgtttgtatatgcacgtggttagaagaagacaaagtgtactatc 161  Q
    |||||||||||||| | |||||||||| ||||||||||  |||||||||    
T  25724705 ttctttgtttgtatctacacgtggttataagaagacaatttgtactatc 25724657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 335 - 438
Target Start/End: Original strand, 28981498 - 28981600
Alignment:
Q  335 tgctcttgtatatgttcttctagaactaaaacttgatttaatactttaaattttagtttatggtctcgca-cacttgaatatacattaatatatctaatt 433  Q
    |||||||||||||||||||| | ||| |||||||||||| |||| |||||||||||||| |||| || || |||||||| ||||||||  ||||| ||||    
T  28981498 tgctcttgtatatgttcttccataaccaaaacttgatttgatacattaaattttagttt-tggt-tctcagcacttgaacatacattagcatatccaatt 28981595  T
Q  434 gttct 438  Q
    |||||    
T  28981596 gttct 28981600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 72 - 195
Target Start/End: Original strand, 28981216 - 28981335
Alignment:
Q  72 ttcaaaaggaattacccgttttatttcaagtgtcgttaaagttctttgtttgtatatgcacgtggttagaagaagacaaagtgtactatctgaatctgat 171  Q
    |||||||| ||||| |||||  ||| ||| |||| || ||||||||||||||| | |||| |||||   ||||||||||||||||||| || | ||||||    
T  28981216 ttcaaaagaaattatccgttc-attacaattgtctttgaagttctttgtttgtttctgcaagtggt---aagaagacaaagtgtactacctaagtctgat 28981311  T
Q  172 agtgacttcttcataagacaacaa 195  Q
    |||||| |||||| ||||| ||||    
T  28981312 agtgacatcttcagaagacgacaa 28981335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 179
Target Start/End: Original strand, 1767589 - 1767656
Alignment:
Q  113 ttctttgtttgtatatgcacgtggttagaagaagacaaagtgtactatct-gaatctgatagtgactt 179  Q
    ||||||||||||||||||| ||||| |||||  |||||| |||| ||||| || ||||||||||||||    
T  1767589 ttctttgtttgtatatgcatgtggtcagaagttgacaaactgtattatctagagtctgatagtgactt 1767656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 1767483 - 1767537
Alignment:
Q  11 cagagacgttggaatgtttcctgatttggttaatgtcgttgaaatgtcattcaaa 65  Q
    ||||||||||||||| || | ||||||||| ||||||||||||  ||||||||||    
T  1767483 cagagacgttggaatattgcttgatttggtcaatgtcgttgaatagtcattcaaa 1767537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 7561049 - 7560993
Alignment:
Q  116 tttgtttgtatatgcacgtggttagaagaagacaaagtgtactatctgaatctgata 172  Q
    ||||||||||| |||||  | | ||||||||||||| |||||||||||| |||||||    
T  7561049 tttgtttgtatctgcacacgataagaagaagacaaattgtactatctgagtctgata 7560993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 20095117 - 20095153
Alignment:
Q  128 tgcacgtggttagaagaagacaaagtgtactatctga 164  Q
    ||||| |||| ||||||||||||||||||||||||||    
T  20095117 tgcacatggtcagaagaagacaaagtgtactatctga 20095153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 379
Target Start/End: Original strand, 20095352 - 20095396
Alignment:
Q  335 tgctcttgtatatgttcttctagaactaaaacttgatttaatact 379  Q
    |||||||||||| ||||||| ||||| |||||||||||| |||||    
T  20095352 tgctcttgtatacgttcttccagaaccaaaacttgattttatact 20095396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 14 - 179
Target Start/End: Original strand, 37390211 - 37390380
Alignment:
Q  14 agacgttggaatgtttcctgatttggttaatgtcgttgaaatgtcattcaaagttcatttc----aaaaggaattacccgttttatttcaagtgtcgtta 109  Q
    |||||||||||||||||  |||| ||||||| ||||||||| | ||||  || ||| |||     ||||||||||| | |||| ||| ||| | || ||     
T  37390211 agacgttggaatgtttctcgattcggttaatatcgttgaaaagacatttgaaattcctttgcttgaaaaggaattatctgtttcattccaattatccttg 37390310  T
Q  110 aagttctttgtttgtatatgcacgtggttagaagaagacaaagtgtactatctgaatctgatagtgactt 179  Q
    ||||||||||||||| | |||| ||||| ||||||||| ||| |||||||||  | ||||||||||||||    
T  37390311 aagttctttgtttgtttctgcatgtggtcagaagaagataaaatgtactatcaaagtctgatagtgactt 37390380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 89 - 189
Target Start/End: Complemental strand, 36740452 - 36740351
Alignment:
Q  89 gttttatttcaagtgtcgttaaagttctttgtttgtatatgcacgtggttagaagaagacaaagt-gtactatctgaatctgatagtgacttcttcataa 187  Q
    |||| ||| ||| |||| |||||||||||| ||||| | | ||  ||| ||||||| |||||| | ||||||||||||||||||||| ||||||||||||    
T  36740452 gtttcattccaattgtccttaaagttctttatttgtttctacatatggctagaagaggacaaaattgtactatctgaatctgatagtaacttcttcataa 36740353  T
Q  188 ga 189  Q
    ||    
T  36740352 ga 36740351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 325 - 421
Target Start/End: Original strand, 16791528 - 16791624
Alignment:
Q  325 aaattttgaatgctcttgtatatgttcttctagaactaaaacttgatttaatactttaaattttagtttatggtctcgcacacttgaatatacatta 421  Q
    |||||||  ||||||||||||||||| || ||| ||  |||||||||||||||| || ||||||||| | | |||  ||||||||||| ||| ||||    
T  16791528 aaattttagatgctcttgtatatgttattttagtaccgaaacttgatttaatacattgaattttagtctgtagtcgtgcacacttgaacatagatta 16791624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 54
Target Start/End: Original strand, 16791189 - 16791223
Alignment:
Q  20 tggaatgtttcctgatttggttaatgtcgttgaaa 54  Q
    ||||||||||| |||||||||||||||||||||||    
T  16791189 tggaatgtttcttgatttggttaatgtcgttgaaa 16791223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 333 - 399
Target Start/End: Original strand, 37390556 - 37390622
Alignment:
Q  333 aatgctcttgtatatgttcttctagaactaaaacttgatttaatactttaaattttagtttatggtc 399  Q
    |||| ||||||||||||||||  || || |||||||||||||| || || ||||||||| |||||||    
T  37390556 aatgttcttgtatatgttctttcagtaccaaaacttgatttaacacattgaattttagtctatggtc 37390622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 334 - 438
Target Start/End: Complemental strand, 5798055 - 5797951
Alignment:
Q  334 atgctcttgtatatgttcttctagaactaaaacttgatttaatactttaaattttagtttatggtctcgcacacttgaatatacattaatatatctaatt 433  Q
    ||||||||||||||| | ||  |||||  ||||||||||| |||| | ||||||||||||||| |   ||||||||||| ||||||||| ||||| ||||    
T  5798055 atgctcttgtatatgatatttcagaaccgaaacttgatttgatacatgaaattttagtttatgattctgcacacttgaacatacattaacatatccaatt 5797956  T
Q  434 gttct 438  Q
    |||||    
T  5797955 gttct 5797951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 11 - 160
Target Start/End: Original strand, 31779589 - 31779742
Alignment:
Q  11 cagagacgttggaatgtttcctgatttggttaatgtcgttgaaatgtcattcaaagttcattt-ca---aaaggaattacccgttttatttcaagtgtcg 106  Q
    ||||||||||| |||||||  ||||||||||||||||||||||| ||| ||  || ||| ||| ||   |||||||||| ||||||||||| |  ||||     
T  31779589 cagagacgttgaaatgttttatgatttggttaatgtcgttgaaaggtcgtttgaaattcctttgcatttaaaggaattatccgttttattttatttgtct 31779688  T
Q  107 ttaaagttctttgtttgtatatgcacgtggttagaagaagacaaagtgtactat 160  Q
    || ||||||||||||||| | |||||||| |  |||||||| ||  ||||||||    
T  31779689 ttgaagttctttgtttgtttctgcacgtgatcggaagaagataagttgtactat 31779742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 110 - 161
Target Start/End: Complemental strand, 14427266 - 14427215
Alignment:
Q  110 aagttctttgtttgtatatgcacgtggttagaagaagacaaagtgtactatc 161  Q
    ||||||||||||||| ||| ||||||||||||| |||||||| |||||||||    
T  14427266 aagttctttgtttgtttatacacgtggttagaaaaagacaaattgtactatc 14427215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 53
Target Start/End: Complemental strand, 5798311 - 5798272
Alignment:
Q  14 agacgttggaatgtttcctgatttggttaatgtcgttgaa 53  Q
    |||| |||||||||||| ||||||||||||||||||||||    
T  5798311 agacattggaatgtttcttgatttggttaatgtcgttgaa 5798272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 111 - 161
Target Start/End: Complemental strand, 13291731 - 13291681
Alignment:
Q  111 agttctttgtttgtatatgcacgtggttagaagaagacaaagtgtactatc 161  Q
    |||||||||||||| | | |||||||| ||||||||||||| |||||||||    
T  13291731 agttctttgtttgtttctacacgtggtcagaagaagacaaattgtactatc 13291681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 42250875 - 42250833
Alignment:
Q  12 agagacgttggaatgtttcctgatttggttaatgtcgttgaaa 54  Q
    |||||||||||||||| |  |||||||||||||||||||||||    
T  42250875 agagacgttggaatgtcttttgatttggttaatgtcgttgaaa 42250833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 51
Target Start/End: Complemental strand, 17034593 - 17034556
Alignment:
Q  14 agacgttggaatgtttcctgatttggttaatgtcgttg 51  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  17034593 agacgttggaatgttgcctgatatggttaatgtcgttg 17034556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 343 - 435
Target Start/End: Complemental strand, 31375434 - 31375342
Alignment:
Q  343 tatatgttcttctagaactaaaacttgatttaatactttaaattttagtttatggtctcgcacacttgaatatacattaatatatctaattgt 435  Q
    |||||||||||  || || ||||||||||||||||| || ||| ||||| ||||| |  ||||||||||| || |||||  ||||| ||||||    
T  31375434 tatatgttctttcagtaccaaaacttgatttaatacattgaatcttagtctatggccctgcacacttgaacatgcattagcatatcaaattgt 31375342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0485 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 112 - 164
Target Start/End: Complemental strand, 8953 - 8901
Alignment:
Q  112 gttctttgtttgtatatgcacgtggttagaagaagacaaagtgtactatctga 164  Q
    |||| ||||||||||||||||||  | ||||||||||||||||||||||||||    
T  8953 gttccttgtttgtatatgcacgtaatcagaagaagacaaagtgtactatctga 8901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 172
Target Start/End: Complemental strand, 7024 - 6862
Alignment:
Q  15 gacgttggaatgtttcctgatttggttaatgtcgttgaaatg-tcattcaaagttcat---ttcaaaaggaattacccgttttatttcaagtgtcgttaa 110  Q
    ||||||| |||||||| ||||||||||||||||||||||| | |  || ||| ||| |   |||||||||||||| | |||| ||| ||| |||| ||||    
T  7024 gacgttgaaatgtttcttgatttggttaatgtcgttgaaaagatatttgaaatttctttgcttcaaaaggaattatctgtttcattccaattgtccttaa 6925  T
Q  111 agttctttgtttgtatatgcacgtggttagaagaag-acaaagtgtactatctgaatctgata 172  Q
     ||||||||||||| ||||   ||||| |||||||| | ||| ||| |||||||| |||||||    
T  6924 tgttctttgtttgtttatgtgtgtggtaagaagaagaaaaaaatgtcctatctgagtctgata 6862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 33; Significance: 0.000000003; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 19692066 - 19692026
Alignment:
Q  14 agacgttggaatgtttcctgatttggttaatgtcgttgaaa 54  Q
    |||| |||||||||||| |||||||||||||||||||||||    
T  19692066 agacattggaatgtttcttgatttggttaatgtcgttgaaa 19692026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 416
Target Start/End: Original strand, 24576083 - 24576166
Alignment:
Q  333 aatgctcttgtatatgttcttctagaactaaaacttgatttaatactttaaattttagtttatggtctcgcacacttgaatata 416  Q
    |||||| |||||||| |||||| || |  |||||||||||| ||||| | ||||||||| |||||||  ||||| |||||||||    
T  24576083 aatgcttttgtatatattcttccaggatcaaaacttgattttatactatgaattttagtctatggtcatgcacatttgaatata 24576166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 21747115 - 21747165
Alignment:
Q  110 aagttctttgtttgtatatgcacgtggttagaagaagacaaagtgtactat 160  Q
    ||||||||||||||||| |||||||||| ||||||||| ||| || |||||    
T  21747115 aagttctttgtttgtatctgcacgtggtcagaagaagataaattgaactat 21747165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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