View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4095_low_16 (Length: 271)

Name: NF4095_low_16
Description: NF4095
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4095_low_16
NF4095_low_16
[»] chr5 (23 HSPs)
chr5 (13-271)||(12595316-12595574)
chr5 (200-271)||(42569032-42569103)
chr5 (210-268)||(28586828-28586886)
chr5 (221-271)||(7674595-7674645)
chr5 (210-270)||(14295454-14295514)
chr5 (200-271)||(4014476-4014547)
chr5 (200-271)||(9202800-9202871)
chr5 (111-154)||(32172716-32172759)
chr5 (200-271)||(39594755-39594825)
chr5 (221-271)||(11615455-11615505)
chr5 (25-71)||(12242561-12242607)
chr5 (210-268)||(12425521-12425579)
chr5 (221-267)||(29117003-29117049)
chr5 (227-268)||(10303751-10303792)
chr5 (222-271)||(10639900-10639949)
chr5 (200-265)||(12595792-12595857)
chr5 (239-271)||(5563651-5563683)
chr5 (235-271)||(7096214-7096250)
chr5 (227-271)||(10363697-10363741)
chr5 (74-154)||(11457161-11457241)
chr5 (200-268)||(14932240-14932307)
chr5 (224-268)||(35095859-35095903)
chr5 (122-154)||(38047854-38047886)
[»] chr7 (24 HSPs)
chr7 (204-271)||(3802195-3802262)
chr7 (211-271)||(35536054-35536114)
chr7 (229-271)||(24973891-24973933)
chr7 (205-267)||(30180002-30180064)
chr7 (213-270)||(30456515-30456572)
chr7 (221-268)||(30496654-30496701)
chr7 (200-267)||(34083577-34083644)
chr7 (210-269)||(40689048-40689107)
chr7 (241-271)||(4970881-4970911)
chr7 (207-269)||(12834996-12835058)
chr7 (235-269)||(19123198-19123232)
chr7 (221-271)||(28440466-28440516)
chr7 (72-154)||(30535626-30535708)
chr7 (221-267)||(39591540-39591586)
chr7 (221-271)||(42656462-42656512)
chr7 (221-271)||(45813253-45813303)
chr7 (234-267)||(3968281-3968314)
chr7 (234-267)||(20476596-20476629)
chr7 (206-271)||(30133996-30134061)
chr7 (200-268)||(12110310-12110378)
chr7 (227-271)||(23214834-23214878)
chr7 (227-271)||(28178916-28178960)
chr7 (235-271)||(30160977-30161013)
chr7 (200-256)||(32730303-32730359)
[»] chr6 (16 HSPs)
chr6 (200-271)||(9093608-9093679)
chr6 (200-271)||(29274281-29274352)
chr6 (213-267)||(24836264-24836318)
chr6 (211-271)||(24782006-24782066)
chr6 (224-267)||(9559617-9559660)
chr6 (200-271)||(31624205-31624276)
chr6 (221-271)||(20671938-20671988)
chr6 (211-271)||(323758-323818)
chr6 (211-271)||(10154168-10154228)
chr6 (200-271)||(22742313-22742384)
chr6 (111-154)||(32917260-32917303)
chr6 (225-271)||(264318-264364)
chr6 (210-271)||(281910-281971)
chr6 (122-154)||(10616516-10616548)
chr6 (200-268)||(33787797-33787865)
chr6 (122-154)||(34404603-34404635)
[»] chr8 (17 HSPs)
chr8 (221-271)||(3537104-3537154)
chr8 (73-165)||(6950374-6950466)
chr8 (200-271)||(10727144-10727214)
chr8 (78-154)||(30191072-30191148)
chr8 (200-268)||(35374425-35374493)
chr8 (224-271)||(27465320-27465367)
chr8 (111-154)||(40071812-40071855)
chr8 (122-168)||(9540971-9541017)
chr8 (221-271)||(11000634-11000684)
chr8 (241-271)||(29168145-29168175)
chr8 (210-271)||(9699948-9700009)
chr8 (242-271)||(10114437-10114466)
chr8 (214-271)||(13561378-13561435)
chr8 (222-271)||(13822120-13822169)
chr8 (228-269)||(32976366-32976407)
chr8 (228-268)||(14482152-14482192)
chr8 (227-271)||(42597348-42597392)
[»] chr3 (18 HSPs)
chr3 (201-271)||(402595-402664)
chr3 (210-271)||(16073105-16073166)
chr3 (200-271)||(36783386-36783457)
chr3 (205-271)||(20192663-20192729)
chr3 (222-271)||(30956700-30956749)
chr3 (222-271)||(30972512-30972561)
chr3 (211-271)||(31053153-31053213)
chr3 (211-271)||(45535345-45535405)
chr3 (220-271)||(15304419-15304470)
chr3 (111-154)||(37273197-37273240)
chr3 (111-154)||(43115119-43115162)
chr3 (221-271)||(1395618-1395668)
chr3 (241-271)||(37689180-37689210)
chr3 (221-271)||(49586989-49587039)
chr3 (222-271)||(38462228-38462277)
chr3 (242-271)||(44061117-44061146)
chr3 (200-268)||(25447296-25447364)
chr3 (200-268)||(33405219-33405287)
[»] chr1 (17 HSPs)
chr1 (203-268)||(17628549-17628614)
chr1 (214-271)||(36151571-36151628)
chr1 (201-271)||(40304107-40304177)
chr1 (235-271)||(23895283-23895319)
chr1 (211-267)||(47877073-47877129)
chr1 (211-271)||(51190808-51190868)
chr1 (111-154)||(23373277-23373320)
chr1 (200-267)||(49517021-49517088)
chr1 (212-270)||(9572172-9572230)
chr1 (221-271)||(15687146-15687196)
chr1 (213-271)||(27145800-27145858)
chr1 (200-266)||(48064261-48064327)
chr1 (227-267)||(14737784-14737824)
chr1 (200-268)||(24915103-24915171)
chr1 (122-154)||(28467496-28467528)
chr1 (239-271)||(29904706-29904738)
chr1 (227-271)||(50319239-50319283)
[»] chr4 (15 HSPs)
chr4 (200-271)||(3175898-3175969)
chr4 (213-271)||(42321944-42322002)
chr4 (200-265)||(53626729-53626794)
chr4 (79-154)||(2841689-2841764)
chr4 (228-271)||(3155550-3155593)
chr4 (235-270)||(4691826-4691861)
chr4 (216-271)||(17884015-17884070)
chr4 (235-269)||(19670882-19670916)
chr4 (200-270)||(25885807-25885877)
chr4 (221-271)||(53422309-53422359)
chr4 (234-271)||(28232492-28232529)
chr4 (221-270)||(41701514-41701563)
chr4 (235-271)||(51044546-51044582)
chr4 (211-271)||(51630058-51630118)
chr4 (235-271)||(52645836-52645872)
[»] chr2 (22 HSPs)
chr2 (200-271)||(656829-656900)
chr2 (201-271)||(4026764-4026834)
chr2 (221-271)||(35459857-35459907)
chr2 (221-271)||(43259781-43259831)
chr2 (211-271)||(19629246-19629306)
chr2 (211-271)||(19826147-19826207)
chr2 (94-153)||(10567121-10567180)
chr2 (221-267)||(10739225-10739271)
chr2 (221-271)||(14209224-14209274)
chr2 (241-271)||(26143734-26143764)
chr2 (234-271)||(11393452-11393489)
chr2 (234-271)||(11410113-11410150)
chr2 (234-271)||(31461385-31461422)
chr2 (222-271)||(40837502-40837551)
chr2 (221-271)||(44600486-44600538)
chr2 (122-154)||(1742007-1742039)
chr2 (122-154)||(4550810-4550842)
chr2 (77-169)||(5759505-5759596)
chr2 (235-271)||(9878769-9878805)
chr2 (122-154)||(15120246-15120278)
chr2 (235-271)||(17952788-17952824)
chr2 (235-271)||(32098395-32098431)
[»] scaffold0024 (2 HSPs)
scaffold0024 (221-271)||(21351-21401)
scaffold0024 (213-267)||(27527-27581)
[»] scaffold0590 (1 HSPs)
scaffold0590 (235-271)||(1161-1197)
[»] scaffold0275 (1 HSPs)
scaffold0275 (235-271)||(2778-2814)


Alignment Details
Target: chr5 (Bit Score: 214; Significance: 1e-117; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 13 - 271
Target Start/End: Original strand, 12595316 - 12595574
Alignment:
Q  13 aatatagaccaatagagctaaagctgtatgaggatccagcaatagggtttatggaagataattgacttatttgagttaatttattgtcataaatacccgt 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||    
T  12595316 aatatagaccaatagagctaaagctgtatgaggatccagcaatagggtttatggaagataattgacttatttgagttaatttattgtcataaatacttgt 12595415  T
Q  113 gagattgtctgggagagattatggaaacaacttatgacatgtagataatttgtgttttcaggtatttccataatctttccnnnnnnncttataaaatcag 212  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||         |||||||||||||    
T  12595416 gagattgtctgggagagattatggaaacaacttacgacatgtggataatttgtgttttcaggtatttccataatcttttaaaaaaaacttataaaatcag 12595515  T
Q  213 cttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagctt 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12595516 cttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagctt 12595574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 271
Target Start/End: Original strand, 42569032 - 42569103
Alignment:
Q  200 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagctt 271  Q
    ||||| ||| ||| |||||  |||||||||||| ||| || |||||||||||||||||||||||||||||||    
T  42569032 cttatcaaaacagattatagcttatacgaaaacaattagactttattttatcttttgctatagaaatagctt 42569103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 210 - 268
Target Start/End: Original strand, 28586828 - 28586886
Alignment:
Q  210 cagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatag 268  Q
    |||||||||||||||| ||||||  ||||| |||||||||||||||| |||||||||||    
T  28586828 cagcttataatttatatgaaaacagtttgactttattttatcttttgttatagaaatag 28586886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 271
Target Start/End: Complemental strand, 7674645 - 7674595
Alignment:
Q  221 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagctt 271  Q
    ||||| |||||| |||| |||||||||||||||||| ||||||||||||||    
T  7674645 ttataagaaaacaatttaaatttattttatcttttggtatagaaatagctt 7674595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 210 - 270
Target Start/End: Complemental strand, 14295514 - 14295454
Alignment:
Q  210 cagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagct 270  Q
    |||||||||  ||||| ||||||  ||||| |||||||||||||||| |||||||||||||    
T  14295514 cagcttatagcttatatgaaaacagtttgactttattttatcttttgttatagaaatagct 14295454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 271
Target Start/End: Original strand, 4014476 - 4014547
Alignment:
Q  200 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagctt 271  Q
    ||||| ||| |||||||| |||| | | ||||| || | | |||||||||||||||||||||||||||||||    
T  4014476 cttatgaaaacagcttatcatttttccaaaaacaatctaactttattttatcttttgctatagaaatagctt 4014547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 271
Target Start/End: Original strand, 9202800 - 9202871
Alignment:
Q  200 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagctt 271  Q
    ||||| ||| ||||||||   ||||| |||||| |||| | ||||||||||||||||||| |||||||||||    
T  9202800 cttatgaaaacagcttattgcttatatgaaaacaatttaactttattttatcttttgctacagaaatagctt 9202871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 111 - 154
Target Start/End: Complemental strand, 32172759 - 32172716
Alignment:
Q  111 gtgagattgtctgggagagattatggaaacaacttatgacatgt 154  Q
    ||||||| || |||||||| ||||||||||||||||||||||||    
T  32172759 gtgagatagtttgggagagcttatggaaacaacttatgacatgt 32172716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 271
Target Start/End: Complemental strand, 39594825 - 39594755
Alignment:
Q  200 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagctt 271  Q
    ||||| ||| ||||||| || |||| ||||||| |||| | ||||||||||||||| |||||||||||||||    
T  39594825 cttatgaaaacagcttacaacttatgcgaaaacaattt-actttattttatctttttctatagaaatagctt 39594755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 271
Target Start/End: Complemental strand, 11615505 - 11615455
Alignment:
Q  221 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagctt 271  Q
    ||||||| |||| |||||| |||||||||||||||| |||| |||||||||    
T  11615505 ttatacgtaaacaatttgactttattttatcttttgttataaaaatagctt 11615455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 12242561 - 12242607
Alignment:
Q  25 tagagctaaagctgtatgaggatccagcaatagggtttatggaagat 71  Q
    ||||||||||||||||||||||||||| || ||| ||| ||||||||    
T  12242561 tagagctaaagctgtatgaggatccaggaacaggatttgtggaagat 12242607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 268
Target Start/End: Complemental strand, 12425579 - 12425521
Alignment:
Q  210 cagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatag 268  Q
    |||||||||  |||||||||||| |||| | ||||||||||||||| ||||| ||||||    
T  12425579 cagcttatagcttatacgaaaacaatttaactttattttatcttttactatataaatag 12425521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 267
Target Start/End: Original strand, 29117003 - 29117049
Alignment:
Q  221 ttatacgaaaactatttgaatttattttatcttttgctatagaaata 267  Q
    ||||||||||||  ||||| |||||||||||||||| ||||||||||    
T  29117003 ttatacgaaaacagtttgactttattttatcttttgttatagaaata 29117049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 227 - 268
Target Start/End: Complemental strand, 10303792 - 10303751
Alignment:
Q  227 gaaaactatttgaatttattttatcttttgctatagaaatag 268  Q
    |||||| |||||| |||||||||||||||| |||||||||||    
T  10303792 gaaaacaatttgactttattttatcttttgttatagaaatag 10303751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 222 - 271
Target Start/End: Complemental strand, 10639949 - 10639900
Alignment:
Q  222 tatacgaaaactatttgaatttattttatcttttgctatagaaatagctt 271  Q
    ||||| ||||| |||| | || ||||||||||||||||||||||||||||    
T  10639949 tatacaaaaacaatttaatttaattttatcttttgctatagaaatagctt 10639900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 265
Target Start/End: Original strand, 12595792 - 12595857
Alignment:
Q  200 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaa 265  Q
    ||||| ||| ||||| ||| |||||| |||||| |||| | |||||||||||||||| ||||||||    
T  12595792 cttatgaaaccagctcatagtttatatgaaaacaatttaactttattttatcttttgttatagaaa 12595857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 271
Target Start/End: Complemental strand, 5563683 - 5563651
Alignment:
Q  239 aatttattttatcttttgctatagaaatagctt 271  Q
    |||||||||||||||||| ||||||||||||||    
T  5563683 aatttattttatcttttgttatagaaatagctt 5563651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 271
Target Start/End: Original strand, 7096214 - 7096250
Alignment:
Q  235 tttgaatttattttatcttttgctatagaaatagctt 271  Q
    ||||| |||||||||||||||| ||||||||||||||    
T  7096214 tttgactttattttatcttttgttatagaaatagctt 7096250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 271
Target Start/End: Complemental strand, 10363741 - 10363697
Alignment:
Q  227 gaaaactatttgaatttattttatcttttgctatagaaatagctt 271  Q
    |||||| |||| | |||||||||||||||| ||||||||||||||    
T  10363741 gaaaacaatttaactttattttatcttttgttatagaaatagctt 10363697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 154
Target Start/End: Complemental strand, 11457241 - 11457161
Alignment:
Q  74 ttgacttatttgagttaatttattgtcataaatacccgtgagattgtctgggagagattatggaaacaacttatgacatgt 154  Q
    |||||||||||||| | || ||||| || ||| ||  |||||| ||| | | |||| ||||||||||||||||||||||||    
T  11457241 ttgacttatttgagcttatctattggcagaaacacttgtgagactgttttgaagagcttatggaaacaacttatgacatgt 11457161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 268
Target Start/End: Complemental strand, 14932307 - 14932240
Alignment:
Q  200 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatag 268  Q
    ||||||| | |||||||||  |||||| ||||| |||| | ||||||||||||||||||||| ||||||    
T  14932307 cttataacaacagcttatagcttatac-aaaacaatttaactttattttatcttttgctataaaaatag 14932240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 268
Target Start/End: Original strand, 35095859 - 35095903
Alignment:
Q  224 tacgaaaactatttgaatttattttatcttttgctatagaaatag 268  Q
    |||| |||| |||||| |||||||||||||||| |||||||||||    
T  35095859 tacggaaacaatttgactttattttatcttttgttatagaaatag 35095903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 154
Target Start/End: Original strand, 38047854 - 38047886
Alignment:
Q  122 tgggagagattatggaaacaacttatgacatgt 154  Q
    |||||||| ||||||||||||||||||||||||    
T  38047854 tgggagagcttatggaaacaacttatgacatgt 38047886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 204 - 271
Target Start/End: Original strand, 3802195 - 3802262
Alignment:
Q  204 taaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagctt 271  Q
    ||||| |||||||||||||||| |||||| |||||| ||||||||| |||||  ||||||||||||||    
T  3802195 taaaaacagcttataatttatatgaaaacgatttgactttattttaccttttattatagaaatagctt 3802262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 211 - 271
Target Start/End: Complemental strand, 35536114 - 35536054
Alignment:
Q  211 agcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagctt 271  Q
    ||||||||| ||||| |||||| |||||| ||||||||||||| || ||||||||||||||    
T  35536114 agcttataacttatatgaaaacaatttgactttattttatcttatgttatagaaatagctt 35536054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 271
Target Start/End: Complemental strand, 24973933 - 24973891
Alignment:
Q  229 aaactatttgaatttattttatcttttgctatagaaatagctt 271  Q
    |||| ||||||||||||||||||||||| ||||||||||||||    
T  24973933 aaacaatttgaatttattttatcttttgttatagaaatagctt 24973891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 205 - 267
Target Start/End: Complemental strand, 30180064 - 30180002
Alignment:
Q  205 aaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaata 267  Q
    |||| |||||||||  |||||||||||| |||| | |||||||||||||||||||| ||||||    
T  30180064 aaaaacagcttatagcttatacgaaaacaatttaactttattttatcttttgctatcgaaata 30180002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 270
Target Start/End: Original strand, 30456515 - 30456572
Alignment:
Q  213 cttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagct 270  Q
    ||||||| ||||| |||||| |||||| |||||||||||||||| | |||||||||||    
T  30456515 cttataacttatatgaaaacaatttgactttattttatcttttgttttagaaatagct 30456572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 221 - 268
Target Start/End: Complemental strand, 30496701 - 30496654
Alignment:
Q  221 ttatacgaaaactatttgaatttattttatcttttgctatagaaatag 268  Q
    |||||||||||| |||||| |||||||||| ||||| |||||||||||    
T  30496701 ttatacgaaaacaatttgactttattttatattttgttatagaaatag 30496654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 267
Target Start/End: Original strand, 34083577 - 34083644
Alignment:
Q  200 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaata 267  Q
    ||||| ||| |||||||||  ||||||  |||| |||| | |||||||||||||||||||||||||||    
T  34083577 cttatgaaaacagcttatagcttatacacaaacaatttaactttattttatcttttgctatagaaata 34083644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 269
Target Start/End: Original strand, 40689048 - 40689107
Alignment:
Q  210 cagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagc 269  Q
    |||||||||  ||||| |||||  |||| | |||||||||||||||||||||||||||||    
T  40689048 cagcttatagcttatatgaaaataatttaactttattttatcttttgctatagaaatagc 40689107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 241 - 271
Target Start/End: Original strand, 4970881 - 4970911
Alignment:
Q  241 tttattttatcttttgctatagaaatagctt 271  Q
    |||||||||||||||||||||||||||||||    
T  4970881 tttattttatcttttgctatagaaatagctt 4970911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 269
Target Start/End: Original strand, 12834996 - 12835058
Alignment:
Q  207 aatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagc 269  Q
    ||||||||||||  | ||| |||||| |||||| |||||||||||||||| | ||||||||||    
T  12834996 aatcagcttatagctaatatgaaaacaatttgactttattttatcttttgttgtagaaatagc 12835058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 235 - 269
Target Start/End: Complemental strand, 19123232 - 19123198
Alignment:
Q  235 tttgaatttattttatcttttgctatagaaatagc 269  Q
    |||||||||||||||||||||| ||||||||||||    
T  19123232 tttgaatttattttatcttttgatatagaaatagc 19123198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 271
Target Start/End: Complemental strand, 28440516 - 28440466
Alignment:
Q  221 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagctt 271  Q
    |||||||||||| |||||| |||||||||||||||| ||  ||||||||||    
T  28440516 ttatacgaaaaccatttgactttattttatcttttgttactgaaatagctt 28440466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 154
Target Start/End: Complemental strand, 30535708 - 30535626
Alignment:
Q  72 aattgacttatttgagttaatttattgtcataaatacccgtgagattgtctgggagagattatggaaacaacttatgacatgt 154  Q
    |||||||||||||||||||||||| || |||||| ||  | |||| ||| | |||||  ||||| ||||||||||||| ||||    
T  30535708 aattgacttatttgagttaatttactgacataaacacttgagagactgttttggagaacttatgaaaacaacttatgatatgt 30535626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 267
Target Start/End: Original strand, 39591540 - 39591586
Alignment:
Q  221 ttatacgaaaactatttgaatttattttatcttttgctatagaaata 267  Q
    ||||| |||||| |||||| |||||||||||||||| ||||||||||    
T  39591540 ttatatgaaaacaatttgactttattttatcttttgttatagaaata 39591586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 271
Target Start/End: Complemental strand, 42656512 - 42656462
Alignment:
Q  221 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagctt 271  Q
    |||||| ||||  |||||| |||||||||||||||| ||||||||||||||    
T  42656512 ttatacaaaaatgatttgactttattttatcttttgttatagaaatagctt 42656462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 271
Target Start/End: Original strand, 45813253 - 45813303
Alignment:
Q  221 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagctt 271  Q
    ||||| |||||| | |||| |||||||||||||||| ||||||||||||||    
T  45813253 ttatatgaaaacaagttgactttattttatcttttggtatagaaatagctt 45813303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 234 - 267
Target Start/End: Original strand, 3968281 - 3968314
Alignment:
Q  234 atttgaatttattttatcttttgctatagaaata 267  Q
    |||| |||||||||||||||||||||||||||||    
T  3968281 atttaaatttattttatcttttgctatagaaata 3968314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 234 - 267
Target Start/End: Original strand, 20476596 - 20476629
Alignment:
Q  234 atttgaatttattttatcttttgctatagaaata 267  Q
    |||||||||||||||||||||||| |||||||||    
T  20476596 atttgaatttattttatcttttgcaatagaaata 20476629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 206 - 271
Target Start/End: Complemental strand, 30134061 - 30133996
Alignment:
Q  206 aaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagctt 271  Q
    ||||||||||| |  |||||||||||| | |||| |||||||||||||||| | || |||||||||    
T  30134061 aaatcagcttaaagcttatacgaaaacaagttgactttattttatcttttgttgtaaaaatagctt 30133996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 268
Target Start/End: Complemental strand, 12110378 - 12110310
Alignment:
Q  200 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatag 268  Q
    ||||| ||| |||||||||  |||||| ||||| |||||| ||||||||||||| ||  ||||||||||    
T  12110378 cttatgaaaacagcttatagcttataccaaaacaatttgactttattttatcttgtgtaatagaaatag 12110310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 271
Target Start/End: Complemental strand, 23214878 - 23214834
Alignment:
Q  227 gaaaactatttgaatttattttatcttttgctatagaaatagctt 271  Q
    ||||||||||||  |||| ||||||||||| ||||||||||||||    
T  23214878 gaaaactatttgcctttagtttatcttttgttatagaaatagctt 23214834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 271
Target Start/End: Complemental strand, 28178960 - 28178916
Alignment:
Q  227 gaaaactatttgaatttattttatcttttgctatagaaatagctt 271  Q
    |||||| || ||| |||||||||||||||| ||||||||||||||    
T  28178960 gaaaacaatatgactttattttatcttttgttatagaaatagctt 28178916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 271
Target Start/End: Original strand, 30160977 - 30161013
Alignment:
Q  235 tttgaatttattttatcttttgctatagaaatagctt 271  Q
    ||||| ||||||||||||||||| |||||||||||||    
T  30160977 tttgactttattttatcttttgccatagaaatagctt 30161013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 32730303 - 32730359
Alignment:
Q  200 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttg 256  Q
    ||||| ||| |||||||| | |||||||||||| |||||| || |||||||||||||    
T  32730303 cttatgaaaacagcttatcagttatacgaaaacaatttgatttgattttatcttttg 32730359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 271
Target Start/End: Original strand, 9093608 - 9093679
Alignment:
Q  200 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagctt 271  Q
    ||||| ||| |||||||||  |||||||||||| |||| | |||||||||||||||| ||||||||||||||    
T  9093608 cttatgaaaacagcttatagcttatacgaaaacaatttaactttattttatcttttgatatagaaatagctt 9093679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 271
Target Start/End: Original strand, 29274281 - 29274352
Alignment:
Q  200 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagctt 271  Q
    ||||| ||| ||| |||||  ||||| |||||| |||||| |||||||||||||||||||||||||||||||    
T  29274281 cttatgaaaacagtttatagcttatatgaaaacaatttgactttattttatcttttgctatagaaatagctt 29274352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 213 - 267
Target Start/End: Original strand, 24836264 - 24836318
Alignment:
Q  213 cttataatttatacgaaaactatttgaatttattttatcttttgctatagaaata 267  Q
    |||||| ||||||||||||| |||||| |||||||||||||||| ||||||||||    
T  24836264 cttatagtttatacgaaaacaatttgactttattttatcttttgttatagaaata 24836318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 211 - 271
Target Start/End: Complemental strand, 24782066 - 24782006
Alignment:
Q  211 agcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagctt 271  Q
    ||||||||| ||||| |||||| |||||| || ||||||||||||| ||||||||||||||    
T  24782066 agcttataacttatatgaaaacaatttgatttgattttatcttttgttatagaaatagctt 24782006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 224 - 267
Target Start/End: Original strand, 9559617 - 9559660
Alignment:
Q  224 tacgaaaactatttgaatttattttatcttttgctatagaaata 267  Q
    ||||||||| |||| |||||||||||||||||||||||||||||    
T  9559617 tacgaaaacaatttaaatttattttatcttttgctatagaaata 9559660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 200 - 271
Target Start/End: Complemental strand, 31624276 - 31624205
Alignment:
Q  200 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagctt 271  Q
    ||||| ||| ||||| |||  |||||||||||| |||| || ||||||||||||||| ||||||||||||||    
T  31624276 cttattaaaacagctaatagattatacgaaaacaatttaaacttattttatcttttgttatagaaatagctt 31624205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 271
Target Start/End: Original strand, 20671938 - 20671988
Alignment:
Q  221 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagctt 271  Q
    |||||||||||| |||||| |||||||||||||||| | ||||||||||||    
T  20671938 ttatacgaaaacaatttgactttattttatcttttgatctagaaatagctt 20671988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 211 - 271
Target Start/End: Complemental strand, 323818 - 323758
Alignment:
Q  211 agcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagctt 271  Q
    |||| |||| ||||| ||||||  |||||||||||||||||||||  ||||||||||||||    
T  323818 agctcataacttatatgaaaacagtttgaatttattttatcttttaatatagaaatagctt 323758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 211 - 271
Target Start/End: Complemental strand, 10154228 - 10154168
Alignment:
Q  211 agcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagctt 271  Q
    ||||||||| ||||| ||||||  ||||| ||||||||||||||| ||||||||| |||||    
T  10154228 agcttataacttatatgaaaacagtttgactttattttatctttttctatagaaacagctt 10154168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 271
Target Start/End: Complemental strand, 22742384 - 22742313
Alignment:
Q  200 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagctt 271  Q
    |||||||||  ||||||||  ||||| |||||| |||||| ||||||||||| |||| |||| |||||||||    
T  22742384 cttataaaaatagcttatagcttatatgaaaacaatttgactttattttatcctttgttatacaaatagctt 22742313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 111 - 154
Target Start/End: Complemental strand, 32917303 - 32917260
Alignment:
Q  111 gtgagattgtctgggagagattatggaaacaacttatgacatgt 154  Q
    |||||| ||| |||||||| ||||||||||||||||||||||||    
T  32917303 gtgagactgtttgggagagcttatggaaacaacttatgacatgt 32917260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 271
Target Start/End: Complemental strand, 264364 - 264318
Alignment:
Q  225 acgaaaactatttgaatttattttatcttttgctatagaaatagctt 271  Q
    |||||||| |||| | |||||||||||||||||| ||||||||||||    
T  264364 acgaaaacgatttaactttattttatcttttgctttagaaatagctt 264318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 210 - 271
Target Start/End: Original strand, 281910 - 281971
Alignment:
Q  210 cagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagctt 271  Q
    |||||||||  ||||| |||||| | |||| |||||||||||||||| ||||| ||||||||    
T  281910 cagcttatagcttatatgaaaacaagttgactttattttatcttttgttataggaatagctt 281971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 154
Target Start/End: Original strand, 10616516 - 10616548
Alignment:
Q  122 tgggagagattatggaaacaacttatgacatgt 154  Q
    |||||||| ||||||||||||||||||||||||    
T  10616516 tgggagagcttatggaaacaacttatgacatgt 10616548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 268
Target Start/End: Original strand, 33787797 - 33787865
Alignment:
Q  200 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatag 268  Q
    ||||| ||| |||||||||| ||||| |||| | |||||| ||| |||||| ||||| |||||||||||    
T  33787797 cttatgaaaacagcttataacttatatgaaatcaatttgactttgttttatattttgttatagaaatag 33787865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 154
Target Start/End: Complemental strand, 34404635 - 34404603
Alignment:
Q  122 tgggagagattatggaaacaacttatgacatgt 154  Q
    |||||||| ||||||||||||||||||||||||    
T  34404635 tgggagagcttatggaaacaacttatgacatgt 34404603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 221 - 271
Target Start/End: Original strand, 3537104 - 3537154
Alignment:
Q  221 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagctt 271  Q
    |||||||||||| |||||| |||||||||||||||||||||||||| ||||    
T  3537104 ttatacgaaaacaatttgactttattttatcttttgctatagaaattgctt 3537154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 73 - 165
Target Start/End: Complemental strand, 6950466 - 6950374
Alignment:
Q  73 attgacttatttgagttaatttattgtcataaatacccgtgagattgtctgggagagattatggaaacaacttatgacatgtagataatttgt 165  Q
    ||||||||||||||||| || || || |||||| |   |||||||||| |||||||| ||||| ||||||| |||||||||| ||||| ||||    
T  6950466 attgacttatttgagtttatctactggcataaacatttgtgagattgtttgggagagcttatgtaaacaacctatgacatgtcgataagttgt 6950374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 200 - 271
Target Start/End: Complemental strand, 10727214 - 10727144
Alignment:
Q  200 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagctt 271  Q
    ||||||||| || ||||||| ||||  ||||||  ||||||||||||| |||||||||||||||||||||||    
T  10727214 cttataaaa-caacttataacttatgtgaaaacactttgaatttatttcatcttttgctatagaaatagctt 10727144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 154
Target Start/End: Original strand, 30191072 - 30191148
Alignment:
Q  78 cttatttgagttaatttattgtcataaatacccgtgagattgtctgggagagattatggaaacaacttatgacatgt 154  Q
    |||||||||||| || ||||| |||||  ||  || ||| ||| |||||||| ||||||||||||||||||||||||    
T  30191072 cttatttgagtttatctattggcataagcacttgttagactgtttgggagagcttatggaaacaacttatgacatgt 30191148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 268
Target Start/End: Original strand, 35374425 - 35374493
Alignment:
Q  200 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatag 268  Q
    ||||| ||||||| |||||  ||||| |||||| |||| | |||||||||||||| |||||||||||||    
T  35374425 cttatgaaatcagattatagcttatatgaaaacaatttaactttattttatctttcgctatagaaatag 35374493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 224 - 271
Target Start/End: Complemental strand, 27465367 - 27465320
Alignment:
Q  224 tacgaaaactatttgaatttattttatcttttgctatagaaatagctt 271  Q
    |||||||||  ||||| || ||||||||||||||||||||||||||||    
T  27465367 tacgaaaacagtttgatttgattttatcttttgctatagaaatagctt 27465320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 111 - 154
Target Start/End: Complemental strand, 40071855 - 40071812
Alignment:
Q  111 gtgagattgtctgggagagattatggaaacaacttatgacatgt 154  Q
    |||||| ||| |||||||| ||||||||||||||||||||||||    
T  40071855 gtgagagtgtttgggagagcttatggaaacaacttatgacatgt 40071812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 168
Target Start/End: Original strand, 9540971 - 9541017
Alignment:
Q  122 tgggagagattatggaaacaacttatgacatgtagataatttgtgtt 168  Q
    |||||||| ||||||||||| ||||||||||||  ||||||||||||    
T  9540971 tgggagagcttatggaaacatcttatgacatgtccataatttgtgtt 9541017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 271
Target Start/End: Original strand, 11000634 - 11000684
Alignment:
Q  221 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagctt 271  Q
    |||| ||||||| |||||| |||||||||||||||| ||| ||||||||||    
T  11000634 ttattcgaaaacaatttgactttattttatcttttgttatggaaatagctt 11000684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 241 - 271
Target Start/End: Original strand, 29168145 - 29168175
Alignment:
Q  241 tttattttatcttttgctatagaaatagctt 271  Q
    |||||||||||||||||||||||||||||||    
T  29168145 tttattttatcttttgctatagaaatagctt 29168175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 210 - 271
Target Start/End: Complemental strand, 9700009 - 9699948
Alignment:
Q  210 cagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagctt 271  Q
    |||||||||||||||  |||||| ||||||  |||||||| |||||| ||| ||||||||||    
T  9700009 cagcttataatttatttgaaaacaatttgaccttattttaacttttgttatcgaaatagctt 9699948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 242 - 271
Target Start/End: Complemental strand, 10114466 - 10114437
Alignment:
Q  242 ttattttatcttttgctatagaaatagctt 271  Q
    ||||||||||||||||||||||||||||||    
T  10114466 ttattttatcttttgctatagaaatagctt 10114437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 271
Target Start/End: Original strand, 13561378 - 13561435
Alignment:
Q  214 ttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagctt 271  Q
    |||||||||||| |||||| |||||| ||||||| || || || ||||||||||||||    
T  13561378 ttataatttatatgaaaacaatttgactttatttaattttctgttatagaaatagctt 13561435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 222 - 271
Target Start/End: Original strand, 13822120 - 13822169
Alignment:
Q  222 tatacgaaaactatttgaatttattttatcttttgctatagaaatagctt 271  Q
    ||||| |||||||||| || ||| ||||||||||||||| ||||||||||    
T  13822120 tatacaaaaactatttaaagttagtttatcttttgctattgaaatagctt 13822169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 228 - 269
Target Start/End: Complemental strand, 32976407 - 32976366
Alignment:
Q  228 aaaactatttgaatttattttatcttttgctatagaaatagc 269  Q
    |||||||||| | |||||||||||||||| ||||||||||||    
T  32976407 aaaactatttaactttattttatcttttgttatagaaatagc 32976366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 268
Target Start/End: Complemental strand, 14482192 - 14482152
Alignment:
Q  228 aaaactatttgaatttattttatcttttgctatagaaatag 268  Q
    ||||| |||||| |||||||||||||||| |||||||||||    
T  14482192 aaaacaatttgactttattttatcttttgttatagaaatag 14482152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 271
Target Start/End: Complemental strand, 42597392 - 42597348
Alignment:
Q  227 gaaaactatttgaatttattttatcttttgctatagaaatagctt 271  Q
    |||||| |||| | |||||||||||||||| ||||||||||||||    
T  42597392 gaaaacaattttactttattttatcttttgttatagaaatagctt 42597348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 271
Target Start/End: Original strand, 402595 - 402664
Alignment:
Q  201 ttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagctt 271  Q
    |||||||| |||||||||| |||||||||||| |||| ||||||  ||||||||| |||||||||||||||    
T  402595 ttataaaaacagcttataacttatacgaaaacaatttaaattta-attatctttttctatagaaatagctt 402664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 210 - 271
Target Start/End: Original strand, 16073105 - 16073166
Alignment:
Q  210 cagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagctt 271  Q
    ||||||||||  ||||| |||||||||| |||| |||||| |||||||||||||||||||||    
T  16073105 cagcttataacatatacaaaaactatttaaattaattttaacttttgctatagaaatagctt 16073166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 200 - 271
Target Start/End: Original strand, 36783386 - 36783457
Alignment:
Q  200 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagctt 271  Q
    ||||| ||| ||||| ||| |||||| |||||| |||| | |||||||||||||||| ||||||||||||||    
T  36783386 cttatgaaaacagctaatagtttatatgaaaacaattttactttattttatcttttggtatagaaatagctt 36783457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 205 - 271
Target Start/End: Original strand, 20192663 - 20192729
Alignment:
Q  205 aaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagctt 271  Q
    |||| |||||||||  ||||| ||||||| ||||| |||||||||||||||| |||| |||||||||    
T  20192663 aaaaacagcttatagattatatgaaaactgtttgactttattttatcttttgttatataaatagctt 20192729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 222 - 271
Target Start/End: Original strand, 30956700 - 30956749
Alignment:
Q  222 tatacgaaaactatttgaatttattttatcttttgctatagaaatagctt 271  Q
    ||||| ||||| |||| | |||||||||||||||||||||||||||||||    
T  30956700 tatacaaaaacaatttaactttattttatcttttgctatagaaatagctt 30956749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 222 - 271
Target Start/End: Original strand, 30972512 - 30972561
Alignment:
Q  222 tatacgaaaactatttgaatttattttatcttttgctatagaaatagctt 271  Q
    ||||| ||||| |||| | |||||||||||||||||||||||||||||||    
T  30972512 tatacaaaaacaatttaactttattttatcttttgctatagaaatagctt 30972561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 211 - 271
Target Start/End: Original strand, 31053153 - 31053213
Alignment:
Q  211 agcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagctt 271  Q
    ||||||||| |||||||||||  | |||| |||||||||||||||| |||||| |||||||    
T  31053153 agcttataacttatacgaaaataaattgattttattttatcttttgttatagatatagctt 31053213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 211 - 271
Target Start/End: Original strand, 45535345 - 45535405
Alignment:
Q  211 agcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagctt 271  Q
    |||||||| ||||||  |||||||||||| |||| ||||| ||||| ||||||||||||||    
T  45535345 agcttatactttatataaaaactatttgactttaatttattttttgttatagaaatagctt 45535405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 271
Target Start/End: Original strand, 15304419 - 15304470
Alignment:
Q  220 tttatacgaaaactatttgaatttattttatcttttgctatagaaatagctt 271  Q
    |||||| |||||| |||| | |||||||||||||||| ||||||||||||||    
T  15304419 tttatatgaaaacaatttaactttattttatcttttgttatagaaatagctt 15304470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 111 - 154
Target Start/End: Complemental strand, 37273240 - 37273197
Alignment:
Q  111 gtgagattgtctgggagagattatggaaacaacttatgacatgt 154  Q
    |||||| ||| |||||||| ||||||||||||||||||||||||    
T  37273240 gtgagactgtttgggagagcttatggaaacaacttatgacatgt 37273197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 111 - 154
Target Start/End: Complemental strand, 43115162 - 43115119
Alignment:
Q  111 gtgagattgtctgggagagattatggaaacaacttatgacatgt 154  Q
    |||||||||| ||| |||| ||||||||||||||||||||||||    
T  43115162 gtgagattgtttggaagagtttatggaaacaacttatgacatgt 43115119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 271
Target Start/End: Complemental strand, 1395668 - 1395618
Alignment:
Q  221 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagctt 271  Q
    ||||| |||||  |||||| |||||||||||||||| ||||||||||||||    
T  1395668 ttatatgaaaataatttgactttattttatcttttgttatagaaatagctt 1395618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 241 - 271
Target Start/End: Complemental strand, 37689210 - 37689180
Alignment:
Q  241 tttattttatcttttgctatagaaatagctt 271  Q
    |||||||||||||||||||||||||||||||    
T  37689210 tttattttatcttttgctatagaaatagctt 37689180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 271
Target Start/End: Original strand, 49586989 - 49587039
Alignment:
Q  221 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagctt 271  Q
    ||||| ||||||  ||||| |||||||||||||||| ||||||||||||||    
T  49586989 ttatatgaaaacagtttgactttattttatcttttgttatagaaatagctt 49587039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 222 - 271
Target Start/End: Complemental strand, 38462277 - 38462228
Alignment:
Q  222 tatacgaaaactatttgaatttattttatcttttgctatagaaatagctt 271  Q
    |||| ||||||  ||||| |||||||||||||||| ||||||||||||||    
T  38462277 tatatgaaaacagtttgactttattttatcttttggtatagaaatagctt 38462228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 242 - 271
Target Start/End: Original strand, 44061117 - 44061146
Alignment:
Q  242 ttattttatcttttgctatagaaatagctt 271  Q
    ||||||||||||||||||||||||||||||    
T  44061117 ttattttatcttttgctatagaaatagctt 44061146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 268
Target Start/End: Original strand, 25447296 - 25447364
Alignment:
Q  200 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatag 268  Q
    ||||| ||| ||| |||||  |||||| ||||| |||| | ||||||||||||||| ||||||||||||    
T  25447296 cttatgaaaacagtttatagcttatacaaaaacaatttaagtttattttatcttttactatagaaatag 25447364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 268
Target Start/End: Original strand, 33405219 - 33405287
Alignment:
Q  200 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatag 268  Q
    ||||| ||| |||||||||  ||||| |||||| | || | ||||||||| ||||||||||||||||||    
T  33405219 cttatgaaaacagcttatagcttatatgaaaacaaattaactttattttaccttttgctatagaaatag 33405287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000002; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 268
Target Start/End: Complemental strand, 17628614 - 17628549
Alignment:
Q  203 ataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatag 268  Q
    |||||| |||||||||||||||| |||||| |||||| |||| ||||||||||  |||||||||||    
T  17628614 ataaaaacagcttataatttatatgaaaacaatttgactttactttatcttttaatatagaaatag 17628549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 271
Target Start/End: Original strand, 36151571 - 36151628
Alignment:
Q  214 ttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagctt 271  Q
    |||||| |||||||||||| |||||| |||||||||||||||| ||| ||||||||||    
T  36151571 ttataacttatacgaaaacaatttgactttattttatcttttgttattgaaatagctt 36151628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 271
Target Start/End: Original strand, 40304107 - 40304177
Alignment:
Q  201 ttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagctt 271  Q
    |||| ||| |||||||||| ||||| |||||| || ||| |||||||||||||||| |||| |||||||||    
T  40304107 ttatgaaaacagcttataacttatatgaaaacaatgtgattttattttatcttttgttatataaatagctt 40304177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 235 - 271
Target Start/End: Complemental strand, 23895319 - 23895283
Alignment:
Q  235 tttgaatttattttatcttttgctatagaaatagctt 271  Q
    |||||||||||||||||||||| ||||||||||||||    
T  23895319 tttgaatttattttatcttttgttatagaaatagctt 23895283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 211 - 267
Target Start/End: Complemental strand, 47877129 - 47877073
Alignment:
Q  211 agcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaata 267  Q
    |||||||| |||||| |||||| |||||| |||||||||||||||| ||| ||||||    
T  47877129 agcttatagtttatatgaaaacaatttgattttattttatcttttgttattgaaata 47877073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 211 - 271
Target Start/End: Complemental strand, 51190868 - 51190808
Alignment:
Q  211 agcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagctt 271  Q
    ||||||||| |||||| ||||| |||| | |||||||||||||||||| || |||||||||    
T  51190868 agcttataacttatacaaaaacaatttaactttattttatcttttgctttacaaatagctt 51190808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 111 - 154
Target Start/End: Original strand, 23373277 - 23373320
Alignment:
Q  111 gtgagattgtctgggagagattatggaaacaacttatgacatgt 154  Q
    |||||||||| |||||||| |||| |||||||||||||||||||    
T  23373277 gtgagattgtttgggagagcttatagaaacaacttatgacatgt 23373320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 267
Target Start/End: Complemental strand, 49517088 - 49517021
Alignment:
Q  200 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaata 267  Q
    ||||| ||| |||||||||  ||| | |||||| |||||| |||||||||||||||| ||||||||||    
T  49517088 cttatgaaaacagcttatagcttaaatgaaaacaatttgactttattttatcttttgttatagaaata 49517021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 270
Target Start/End: Original strand, 9572172 - 9572230
Alignment:
Q  212 gcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagct 270  Q
    |||||||  |||||| ||| | |||| | ||||||||||||||||||||||||||||||    
T  9572172 gcttatagcttatacaaaagcaatttaactttattttatcttttgctatagaaatagct 9572230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 271
Target Start/End: Original strand, 15687146 - 15687196
Alignment:
Q  221 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagctt 271  Q
    |||||||||||| |||| | |||||||||| ||||| ||||||||||||||    
T  15687146 ttatacgaaaacaatttaactttattttatattttgttatagaaatagctt 15687196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 271
Target Start/End: Original strand, 27145800 - 27145858
Alignment:
Q  213 cttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagctt 271  Q
    ||||||| |||||||||||  |||| |||||||||||||| ||| | ||||||||||||    
T  27145800 cttataaattatacgaaaataatttaaatttattttatctgttgttgtagaaatagctt 27145858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 266
Target Start/End: Complemental strand, 48064327 - 48064261
Alignment:
Q  200 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaat 266  Q
    ||||| |||||| ||||||| |||||| ||||   ||| | ||||||||||||||||||||||||||    
T  48064327 cttatgaaatcaacttataacttatacaaaaatagttttactttattttatcttttgctatagaaat 48064261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 267
Target Start/End: Original strand, 14737784 - 14737824
Alignment:
Q  227 gaaaactatttgaatttattttatcttttgctatagaaata 267  Q
    |||||| |||||| |||||||||||||||| ||||||||||    
T  14737784 gaaaacaatttgactttattttatcttttgttatagaaata 14737824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 268
Target Start/End: Original strand, 24915103 - 24915171
Alignment:
Q  200 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatag 268  Q
    ||||| ||| |||||||||   ||||| ||||| |||| | ||||||||||||| ||||||||||||||    
T  24915103 cttatgaaaacagcttatagcatatacaaaaacaatttaactttattttatcttctgctatagaaatag 24915171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 154
Target Start/End: Complemental strand, 28467528 - 28467496
Alignment:
Q  122 tgggagagattatggaaacaacttatgacatgt 154  Q
    |||||||||||||||||| ||||||||||||||    
T  28467528 tgggagagattatggaaataacttatgacatgt 28467496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 271
Target Start/End: Complemental strand, 29904738 - 29904706
Alignment:
Q  239 aatttattttatcttttgctatagaaatagctt 271  Q
    ||||||||||||||||||||||| |||||||||    
T  29904738 aatttattttatcttttgctataaaaatagctt 29904706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 271
Target Start/End: Complemental strand, 50319283 - 50319239
Alignment:
Q  227 gaaaactatttgaatttattttatcttttgctatagaaatagctt 271  Q
    |||||| | |||| |||||||||||||||| ||||||||||||||    
T  50319283 gaaaacaacttgactttattttatcttttgttatagaaatagctt 50319239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000002; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 200 - 271
Target Start/End: Complemental strand, 3175969 - 3175898
Alignment:
Q  200 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagctt 271  Q
    ||||| ||| |||||||||| |||   |||||| |||||| |||||||||||||||||||||||| ||||||    
T  3175969 cttatgaaaacagcttataacttacttgaaaacaatttgactttattttatcttttgctatagaagtagctt 3175898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 271
Target Start/End: Original strand, 42321944 - 42322002
Alignment:
Q  213 cttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagctt 271  Q
    ||||||||||||| |||||| |||||| ||||||||||| |||| |||| |||||||||    
T  42321944 cttataatttatatgaaaacaatttgactttattttatcatttgttataaaaatagctt 42322002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 265
Target Start/End: Complemental strand, 53626794 - 53626729
Alignment:
Q  200 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaa 265  Q
    ||||| ||| |||||||||  ||||| ||||||  |||||||||||||||||||||| ||||||||    
T  53626794 cttatgaaaacagcttatagcttatatgaaaacattttgaatttattttatcttttgttatagaaa 53626729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 79 - 154
Target Start/End: Complemental strand, 2841764 - 2841689
Alignment:
Q  79 ttatttgagttaatttattgtcataaatacccgtgagattgtctgggagagattatggaaacaacttatgacatgt 154  Q
    ||||||||||| ||  |||| |||||| || ||||||||||| || ||||| ||||| || |||||||||||||||    
T  2841764 ttatttgagtttatccattgacataaaaactcgtgagattgtttgcgagagtttatgaaagcaacttatgacatgt 2841689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 228 - 271
Target Start/End: Complemental strand, 3155593 - 3155550
Alignment:
Q  228 aaaactatttgaatttattttatcttttgctatagaaatagctt 271  Q
    ||||| |||| | |||||||||||||||||||||||||||||||    
T  3155593 aaaacaatttaactttattttatcttttgctatagaaatagctt 3155550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 235 - 270
Target Start/End: Complemental strand, 4691861 - 4691826
Alignment:
Q  235 tttgaatttattttatcttttgctatagaaatagct 270  Q
    |||||||||||||||||||||| |||||||||||||    
T  4691861 tttgaatttattttatcttttgatatagaaatagct 4691826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 216 - 271
Target Start/End: Complemental strand, 17884070 - 17884015
Alignment:
Q  216 ataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagctt 271  Q
    |||| |||||| ||||| |||| | |||||||||||||||| ||||||||||||||    
T  17884070 ataacttatacaaaaacaatttaactttattttatcttttgttatagaaatagctt 17884015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 235 - 269
Target Start/End: Original strand, 19670882 - 19670916
Alignment:
Q  235 tttgaatttattttatcttttgctatagaaatagc 269  Q
    |||||||||||||||||||||| ||||||||||||    
T  19670882 tttgaatttattttatcttttgatatagaaatagc 19670916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 270
Target Start/End: Complemental strand, 25885877 - 25885807
Alignment:
Q  200 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagct 270  Q
    ||||| ||| || ||||||  ||| |||||||| |||| | ||||||||||||||||||||||||| ||||    
T  25885877 cttatgaaaacaacttatagcttacacgaaaacaatttaactttattttatcttttgctatagaaagagct 25885807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 271
Target Start/End: Complemental strand, 53422359 - 53422309
Alignment:
Q  221 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagctt 271  Q
    |||||| |||||| ||||||||||||||||||| || | ||||||||||||    
T  53422359 ttatacaaaaactgtttgaatttattttatcttgtgttgtagaaatagctt 53422309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 234 - 271
Target Start/End: Complemental strand, 28232529 - 28232492
Alignment:
Q  234 atttgaatttattttatcttttgctatagaaatagctt 271  Q
    |||||| || ||||||||||||||||||||||||||||    
T  28232529 atttgatttgattttatcttttgctatagaaatagctt 28232492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 270
Target Start/End: Original strand, 41701514 - 41701563
Alignment:
Q  221 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagct 270  Q
    ||||| |||||| |||||| |||||||||||||||| |||| ||||||||    
T  41701514 ttatatgaaaacgatttgactttattttatcttttgttatataaatagct 41701563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 271
Target Start/End: Original strand, 51044546 - 51044582
Alignment:
Q  235 tttgaatttattttatcttttgctatagaaatagctt 271  Q
    ||||| |||||||||||||||| ||||||||||||||    
T  51044546 tttgactttattttatcttttgttatagaaatagctt 51044582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 271
Target Start/End: Complemental strand, 51630118 - 51630058
Alignment:
Q  211 agcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagctt 271  Q
    ||||||||  |||||  ||||| |||| | ||||||||||||||||||||| |||||||||    
T  51630118 agcttatagcttatatcaaaacaatttaactttattttatcttttgctatataaatagctt 51630058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 271
Target Start/End: Original strand, 52645836 - 52645872
Alignment:
Q  235 tttgaatttattttatcttttgctatagaaatagctt 271  Q
    |||||||| ||||||||||||| ||||||||||||||    
T  52645836 tttgaattgattttatcttttgttatagaaatagctt 52645872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000002; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 200 - 271
Target Start/End: Original strand, 656829 - 656900
Alignment:
Q  200 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagctt 271  Q
    ||||| |||||| |||| |  |||||||||||| |||||| | |||||||||||||| ||||||||||||||    
T  656829 cttatgaaatcaacttacagcttatacgaaaacaatttgattatattttatcttttgttatagaaatagctt 656900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 271
Target Start/End: Complemental strand, 4026834 - 4026764
Alignment:
Q  201 ttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagctt 271  Q
    |||| ||| ||||||||||||||| | ||||  |||| | ||||||||||||||||||||| |||||||||    
T  4026834 ttatgaaaacagcttataatttatgcaaaaataatttaactttattttatcttttgctataaaaatagctt 4026764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 271
Target Start/End: Complemental strand, 35459907 - 35459857
Alignment:
Q  221 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagctt 271  Q
    |||||||||||| |||||| |||||||||||||||| |||| |||||||||    
T  35459907 ttatacgaaaacaatttgactttattttatcttttggtatacaaatagctt 35459857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 271
Target Start/End: Complemental strand, 43259831 - 43259781
Alignment:
Q  221 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagctt 271  Q
    |||||| |||||||||||| ||||||||||||| || ||||||||||||||    
T  43259831 ttatacaaaaactatttgactttattttatcttgtgttatagaaatagctt 43259781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 211 - 271
Target Start/End: Complemental strand, 19629306 - 19629246
Alignment:
Q  211 agcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagctt 271  Q
    |||||||| ||||||  |||||||||||| |||| ||||| ||||| ||||||||||||||    
T  19629306 agcttatactttatataaaaactatttgactttaatttattttttgttatagaaatagctt 19629246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 211 - 271
Target Start/End: Complemental strand, 19826207 - 19826147
Alignment:
Q  211 agcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagctt 271  Q
    |||||||| ||||||  |||||||||||| |||| ||||| ||||| ||||||||||||||    
T  19826207 agcttatactttatataaaaactatttgactttaatttattttttgttatagaaatagctt 19826147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 94 - 153
Target Start/End: Complemental strand, 10567180 - 10567121
Alignment:
Q  94 tattgtcataaatacccgtgagattgtctgggagagattatggaaacaacttatgacatg 153  Q
    ||||| ||||| ||| ||||||| ||| ||||||||||| |||||||| |||||||||||    
T  10567180 tattgacataagtactcgtgagactgtttgggagagattgtggaaacagcttatgacatg 10567121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 267
Target Start/End: Original strand, 10739225 - 10739271
Alignment:
Q  221 ttatacgaaaactatttgaatttattttatcttttgctatagaaata 267  Q
    ||||||||||||||||||| |||||||||||  ||||| ||||||||    
T  10739225 ttatacgaaaactatttgactttattttatcagttgctctagaaata 10739271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 271
Target Start/End: Complemental strand, 14209274 - 14209224
Alignment:
Q  221 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagctt 271  Q
    ||||| ||||||  |||||||||||||||||||||| ||| ||||||||||    
T  14209274 ttatatgaaaacagtttgaatttattttatcttttgttattgaaatagctt 14209224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 241 - 271
Target Start/End: Original strand, 26143734 - 26143764
Alignment:
Q  241 tttattttatcttttgctatagaaatagctt 271  Q
    |||||||||||||||||||||||||||||||    
T  26143734 tttattttatcttttgctatagaaatagctt 26143764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 234 - 271
Target Start/End: Original strand, 11393452 - 11393489
Alignment:
Q  234 atttgaatttattttatcttttgctatagaaatagctt 271  Q
    ||||||||||||| ||||||||| ||||||||||||||    
T  11393452 atttgaatttattatatcttttgatatagaaatagctt 11393489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 234 - 271
Target Start/End: Original strand, 11410113 - 11410150
Alignment:
Q  234 atttgaatttattttatcttttgctatagaaatagctt 271  Q
    ||||||||||||| ||||||||| ||||||||||||||    
T  11410113 atttgaatttattatatcttttgatatagaaatagctt 11410150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 234 - 271
Target Start/End: Complemental strand, 31461422 - 31461385
Alignment:
Q  234 atttgaatttattttatcttttgctatagaaatagctt 271  Q
    |||||| |||||||||||||||| ||||||||||||||    
T  31461422 atttgactttattttatcttttgttatagaaatagctt 31461385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 222 - 271
Target Start/End: Original strand, 40837502 - 40837551
Alignment:
Q  222 tatacgaaaactatttgaatttattttatcttttgctatagaaatagctt 271  Q
    |||| |||||| |||||| |||| ||||||||||| ||||||||||||||    
T  40837502 tatatgaaaacaatttgactttaatttatcttttgttatagaaatagctt 40837551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 271
Target Start/End: Complemental strand, 44600538 - 44600486
Alignment:
Q  221 ttatacgaaaactatttgaatttattttatctttt--gctatagaaatagctt 271  Q
    ||||| ||||||||||| | |||||||||||||||  ||||||||||||||||    
T  44600538 ttatatgaaaactatttaactttattttatctttttggctatagaaatagctt 44600486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 154
Target Start/End: Original strand, 1742007 - 1742039
Alignment:
Q  122 tgggagagattatggaaacaacttatgacatgt 154  Q
    |||||||| ||||||||||||||||||||||||    
T  1742007 tgggagagcttatggaaacaacttatgacatgt 1742039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 154
Target Start/End: Complemental strand, 4550842 - 4550810
Alignment:
Q  122 tgggagagattatggaaacaacttatgacatgt 154  Q
    |||||||| ||||||||||||||||||||||||    
T  4550842 tgggagagcttatggaaacaacttatgacatgt 4550810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 169
Target Start/End: Original strand, 5759505 - 5759596
Alignment:
Q  77 acttatttgagttaatttattgtcataaatacccgtgagattgtctgggagagattatggaaacaacttatgacatgtagataatttgtgttt 169  Q
    ||||||||||||| || |||||  |||| |||  |||||| ||| |||||||| ||||||||||| |||| |||||||  |||| ||||||||    
T  5759505 acttatttgagtttatctattggtataagtacttgtgagactgtttgggagagcttatggaaacagctta-gacatgtccataagttgtgttt 5759596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 271
Target Start/End: Original strand, 9878769 - 9878805
Alignment:
Q  235 tttgaatttattttatcttttgctatagaaatagctt 271  Q
    ||||| |||||||||||||||| ||||||||||||||    
T  9878769 tttgagtttattttatcttttgttatagaaatagctt 9878805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 154
Target Start/End: Complemental strand, 15120278 - 15120246
Alignment:
Q  122 tgggagagattatggaaacaacttatgacatgt 154  Q
    |||||||| ||||||||||||||||||||||||    
T  15120278 tgggagagcttatggaaacaacttatgacatgt 15120246  T

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Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 271
Target Start/End: Original strand, 17952788 - 17952824
Alignment:
Q  235 tttgaatttattttatcttttgctatagaaatagctt 271  Q
    ||||| |||||||||||||||| ||||||||||||||    
T  17952788 tttgactttattttatcttttgttatagaaatagctt 17952824  T

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Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 271
Target Start/End: Original strand, 32098395 - 32098431
Alignment:
Q  235 tttgaatttattttatcttttgctatagaaatagctt 271  Q
    ||||| |||||||||||||||| ||||||||||||||    
T  32098395 tttgactttattttatcttttgttatagaaatagctt 32098431  T

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Target: scaffold0024 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 271
Target Start/End: Original strand, 21351 - 21401
Alignment:
Q  221 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagctt 271  Q
    |||||||||||| |||| | ||||||||||||||| ||||| |||||||||    
T  21351 ttatacgaaaacaatttaactttattttatcttttcctataaaaatagctt 21401  T

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Target: scaffold0024; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 267
Target Start/End: Complemental strand, 27581 - 27527
Alignment:
Q  213 cttataatttatacgaaaactatttgaatttattttatcttttgctatagaaata 267  Q
    |||||| |||||| |||||| |||||| ||||||||||||| || ||||||||||    
T  27581 cttatagtttatatgaaaacaatttgactttattttatcttctgttatagaaata 27527  T

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Target: scaffold0590 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 271
Target Start/End: Original strand, 1161 - 1197
Alignment:
Q  235 tttgaatttattttatcttttgctatagaaatagctt 271  Q
    ||||| |||||||||||||||| ||||||||||||||    
T  1161 tttgactttattttatcttttgttatagaaatagctt 1197  T

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Target: scaffold0275 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 271
Target Start/End: Complemental strand, 2814 - 2778
Alignment:
Q  235 tttgaatttattttatcttttgctatagaaatagctt 271  Q
    ||||| |||||||||||||||| ||||||||||||||    
T  2814 tttgactttattttatcttttgttatagaaatagctt 2778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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