View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4095_low_6 (Length: 437)
Name: NF4095_low_6
Description: NF4095
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4095_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 411; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 411; E-Value: 0
Query Start/End: Original strand, 9 - 423
Target Start/End: Complemental strand, 102612 - 102198
Alignment:
| Q |
9 |
gcaaaggtgaggcataattgaccggttactgtcaattgcttaatgtattatttcaacaatagaacttatgggcatttattatttgaataaaaacaagatc |
108 |
Q |
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| T |
102612 |
gcaaaggtgaggcataattgaccggttactgtcaattgcttaatgtattatttcaacaatagaacttatgggcatttattatttgaataaaaacaagatc |
102513 |
T |
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| Q |
109 |
aaaactcattacaaggttgaattaacaatgataatgaccggataaaagaatacggagtaaaaggaatatttacataattgaaactaagcaaaacttgaac |
208 |
Q |
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| T |
102512 |
aaaactcattacaaggttgaattaacaatgataatgaccggataaaagaatacggagtaaaaggaatatttacataattgaaactaagcaaaacttgaac |
102413 |
T |
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| Q |
209 |
ctaagcttgattcgccaggccggaaatagcattagctttagaagagaaaggaattaatctgcacaaccaccaaacctcgattcattgcatggtataaaac |
308 |
Q |
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| T |
102412 |
ctaagcttgattcgccaggccggaaatagcattagctttagaagagaaaggaattaatctgcacaaccaccaaacctcgattcattgcatggtataaaac |
102313 |
T |
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| Q |
309 |
atgtatatccctgagaaaaaagtgaagacaaatctttgaagttaaatttctaagaattggtattagggacagagaacacaataaggtcttcaacctacaa |
408 |
Q |
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| T |
102312 |
atgtatatccctgagaaaaaagtgaagacaaatctttgaagttaaatttctaagaattggtattagggacagagaacacaataaggtctttaacctacaa |
102213 |
T |
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| Q |
409 |
taataatgatggtaa |
423 |
Q |
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| T |
102212 |
taataatgatggtaa |
102198 |
T |
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