View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4097_low_16 (Length: 325)

Name: NF4097_low_16
Description: NF4097
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4097_low_16
NF4097_low_16
[»] chr5 (46 HSPs)
chr5 (25-325)||(30072093-30072393)
chr5 (25-195)||(26329907-26330074)
chr5 (25-195)||(11274167-11274337)
chr5 (25-185)||(16622514-16622673)
chr5 (28-195)||(25594533-25594699)
chr5 (53-165)||(18452677-18452789)
chr5 (25-175)||(17027655-17027804)
chr5 (25-195)||(24841861-24842030)
chr5 (25-202)||(22229905-22230081)
chr5 (53-195)||(16634154-16634296)
chr5 (52-200)||(26070577-26070724)
chr5 (53-175)||(7742735-7742857)
chr5 (200-299)||(24517295-24517394)
chr5 (200-285)||(12340089-12340173)
chr5 (52-125)||(19763750-19763823)
chr5 (200-284)||(17382110-17382194)
chr5 (39-175)||(24517473-24517609)
chr5 (200-284)||(25594767-25594851)
chr5 (52-192)||(17381905-17382048)
chr5 (52-186)||(18178217-18178352)
chr5 (200-284)||(17027483-17027567)
chr5 (231-317)||(22229731-22229818)
chr5 (76-285)||(25075201-25075397)
chr5 (76-285)||(25133170-25133366)
chr5 (52-141)||(23157668-23157757)
chr5 (32-185)||(25680705-25680857)
chr5 (72-198)||(12339899-12340024)
chr5 (79-175)||(20694767-20694863)
chr5 (200-284)||(24841709-24841793)
chr5 (88-181)||(24410830-24410923)
chr5 (200-284)||(18222449-18222533)
chr5 (200-307)||(22967917-22968025)
chr5 (59-195)||(25367702-25367836)
chr5 (200-309)||(15205575-15205683)
chr5 (56-123)||(22643773-22643840)
chr5 (76-163)||(24130765-24130854)
chr5 (200-285)||(16622742-16622826)
chr5 (83-195)||(22755002-22755114)
chr5 (77-195)||(11997782-11997901)
chr5 (230-285)||(22754903-22754958)
chr5 (202-305)||(26070409-26070512)
chr5 (77-127)||(17695352-17695402)
chr5 (201-263)||(23157864-23157926)
chr5 (200-250)||(25680586-25680636)
chr5 (205-273)||(11274411-11274479)
chr5 (69-141)||(19331671-19331743)
[»] chr1 (54 HSPs)
chr1 (25-193)||(11769831-11769999)
chr1 (56-185)||(25494357-25494485)
chr1 (64-195)||(25727785-25727916)
chr1 (64-195)||(25736193-25736324)
chr1 (25-190)||(23519606-23519770)
chr1 (29-195)||(26657584-26657749)
chr1 (42-195)||(30675592-30675744)
chr1 (67-195)||(25730450-25730578)
chr1 (52-195)||(30781868-30782010)
chr1 (42-173)||(18300857-18300988)
chr1 (25-152)||(50047325-50047452)
chr1 (52-175)||(26854184-26854307)
chr1 (41-185)||(23223530-23223675)
chr1 (25-120)||(12423752-12423847)
chr1 (77-160)||(27461070-27461153)
chr1 (56-195)||(52271113-52271251)
chr1 (200-284)||(23223367-23223451)
chr1 (53-164)||(26102195-26102306)
chr1 (56-153)||(19257674-19257769)
chr1 (25-129)||(9328341-9328444)
chr1 (200-307)||(12423989-12424097)
chr1 (200-310)||(50047110-50047221)
chr1 (52-174)||(15298735-15298856)
chr1 (77-175)||(31313679-31313777)
chr1 (52-141)||(25373907-25373996)
chr1 (200-307)||(8247732-8247840)
chr1 (25-129)||(9353186-9353289)
chr1 (200-278)||(12810284-12810362)
chr1 (81-174)||(15416866-15416960)
chr1 (202-284)||(26657432-26657514)
chr1 (200-284)||(30675439-30675524)
chr1 (210-285)||(21451900-21451976)
chr1 (200-263)||(24903370-24903433)
chr1 (25-110)||(9252447-9252532)
chr1 (202-284)||(18301080-18301164)
chr1 (203-284)||(25730649-25730729)
chr1 (93-174)||(34381839-34381920)
chr1 (200-284)||(11770069-11770153)
chr1 (93-185)||(23521635-23521726)
chr1 (217-296)||(30781703-30781783)
chr1 (81-158)||(31319504-31319581)
chr1 (52-121)||(23505938-23506006)
chr1 (52-152)||(25126630-25126730)
chr1 (71-152)||(18391232-18391314)
chr1 (52-186)||(21548764-21548898)
chr1 (100-195)||(8247570-8247664)
chr1 (77-153)||(18795330-18795407)
chr1 (200-298)||(18795122-18795221)
chr1 (52-119)||(25665634-25665701)
chr1 (210-284)||(25266430-25266503)
chr1 (200-273)||(23519830-23519903)
chr1 (200-277)||(34381671-34381748)
chr1 (200-276)||(18391046-18391122)
chr1 (200-244)||(25494554-25494598)
[»] chr7 (58 HSPs)
chr7 (25-200)||(29544622-29544797)
chr7 (25-185)||(7494814-7494973)
chr7 (25-195)||(20470647-20470817)
chr7 (25-174)||(9801712-9801860)
chr7 (56-195)||(23125008-23125147)
chr7 (29-150)||(21545668-21545789)
chr7 (52-195)||(7142206-7142348)
chr7 (28-175)||(20017080-20017227)
chr7 (25-195)||(21471904-21472072)
chr7 (25-195)||(7815431-7815600)
chr7 (52-181)||(1074574-1074703)
chr7 (85-174)||(9761313-9761401)
chr7 (25-157)||(315319-315450)
chr7 (200-284)||(29544475-29544559)
chr7 (29-157)||(20446348-20446475)
chr7 (200-285)||(22067881-22067967)
chr7 (200-284)||(20470885-20470969)
chr7 (30-129)||(10670417-10670515)
chr7 (44-185)||(9070506-9070646)
chr7 (52-141)||(18496726-18496815)
chr7 (80-136)||(12358655-12358711)
chr7 (208-307)||(20446171-20446271)
chr7 (54-181)||(4977687-4977813)
chr7 (42-195)||(22067657-22067811)
chr7 (52-186)||(24596868-24597002)
chr7 (71-181)||(30405715-30405825)
chr7 (81-181)||(22532538-22532637)
chr7 (25-120)||(7493495-7493590)
chr7 (42-173)||(7777895-7778024)
chr7 (42-194)||(2630331-2630482)
chr7 (67-141)||(5312665-5312739)
chr7 (77-186)||(3268855-3268964)
chr7 (200-284)||(7142054-7142138)
chr7 (208-295)||(7815267-7815355)
chr7 (53-186)||(20461511-20461646)
chr7 (206-295)||(315129-315219)
chr7 (202-252)||(1255290-1255340)
chr7 (77-135)||(14649663-14649721)
chr7 (200-278)||(23124863-23124940)
chr7 (76-153)||(46054845-46054921)
chr7 (52-175)||(3487232-3487353)
chr7 (212-307)||(21471729-21471825)
chr7 (110-195)||(1255135-1255220)
chr7 (52-113)||(8308900-8308961)
chr7 (78-173)||(2353131-2353227)
chr7 (52-92)||(4828998-4829038)
chr7 (113-181)||(9755915-9755983)
chr7 (113-181)||(9800711-9800779)
chr7 (77-125)||(10253629-10253677)
chr7 (67-185)||(10292872-10292989)
chr7 (236-284)||(19140085-19140133)
chr7 (236-284)||(20739484-20739532)
chr7 (200-284)||(21545874-21545957)
chr7 (53-195)||(7372434-7372572)
chr7 (200-284)||(7494667-7494751)
chr7 (201-265)||(9385463-9385527)
chr7 (77-109)||(28951863-28951895)
chr7 (199-263)||(46054675-46054739)
[»] chr2 (45 HSPs)
chr2 (25-195)||(27417100-27417270)
chr2 (25-195)||(30998879-30999048)
chr2 (52-200)||(18236167-18236314)
chr2 (56-195)||(21505007-21505146)
chr2 (54-195)||(24188077-24188217)
chr2 (41-192)||(16593604-16593754)
chr2 (203-307)||(21505217-21505322)
chr2 (67-195)||(22511053-22511181)
chr2 (52-175)||(1732678-1732801)
chr2 (52-195)||(17415028-17415169)
chr2 (52-195)||(19541145-19541286)
chr2 (200-308)||(25473968-25474077)
chr2 (67-175)||(14921918-14922026)
chr2 (200-307)||(35707735-35707843)
chr2 (25-195)||(35707911-35708080)
chr2 (77-195)||(21848963-21849080)
chr2 (25-195)||(25474145-25474314)
chr2 (52-129)||(18818875-18818952)
chr2 (77-153)||(24047531-24047608)
chr2 (77-200)||(17152256-17152379)
chr2 (199-284)||(32619598-32619683)
chr2 (82-153)||(15454433-15454504)
chr2 (200-263)||(16593827-16593890)
chr2 (58-153)||(31262147-31262241)
chr2 (200-261)||(30998750-30998811)
chr2 (71-185)||(32619747-32619856)
chr2 (200-284)||(28278498-28278581)
chr2 (90-185)||(15829239-15829333)
chr2 (53-112)||(22525685-22525744)
chr2 (199-277)||(1733063-1733141)
chr2 (53-127)||(31274131-31274205)
chr2 (52-180)||(34063705-34063833)
chr2 (28-185)||(1733209-1733365)
chr2 (77-152)||(17862560-17862635)
chr2 (199-308)||(18236376-18236486)
chr2 (200-262)||(21844704-21844766)
chr2 (121-175)||(27917916-27917970)
chr2 (200-295)||(19949629-19949725)
chr2 (200-307)||(32276588-32276696)
chr2 (237-284)||(31914045-31914092)
chr2 (200-262)||(21843077-21843139)
chr2 (201-238)||(15829136-15829173)
chr2 (76-129)||(17884531-17884584)
chr2 (67-100)||(19949436-19949469)
chr2 (77-129)||(30705374-30705427)
[»] chr8 (46 HSPs)
chr8 (28-195)||(16052117-16052284)
chr8 (53-195)||(32239395-32239537)
chr8 (28-185)||(28901190-28901346)
chr8 (25-200)||(28902192-28902366)
chr8 (25-157)||(11310094-11310224)
chr8 (52-198)||(22894396-22894540)
chr8 (53-175)||(24696709-24696832)
chr8 (68-195)||(28859119-28859246)
chr8 (52-173)||(28291965-28292086)
chr8 (25-195)||(16054402-16054571)
chr8 (56-200)||(29291873-29292016)
chr8 (52-175)||(30543888-30544012)
chr8 (202-296)||(12956432-12956527)
chr8 (71-186)||(13583403-13583518)
chr8 (52-198)||(11437524-11437670)
chr8 (52-173)||(12956610-12956732)
chr8 (28-185)||(14976952-14977108)
chr8 (200-278)||(14977182-14977260)
chr8 (206-307)||(16052358-16052460)
chr8 (202-284)||(24120187-24120269)
chr8 (52-141)||(30850964-30851053)
chr8 (41-141)||(13081788-13081887)
chr8 (25-173)||(24120353-24120501)
chr8 (54-181)||(6888059-6888186)
chr8 (59-181)||(14424684-14424806)
chr8 (200-307)||(13082012-13082120)
chr8 (200-307)||(16054226-16054334)
chr8 (200-284)||(28901415-28901499)
chr8 (52-175)||(5153885-5154008)
chr8 (29-129)||(5569981-5570081)
chr8 (200-284)||(32239243-32239327)
chr8 (52-181)||(27097666-27097793)
chr8 (210-307)||(29047401-29047499)
chr8 (52-129)||(31436646-31436719)
chr8 (207-280)||(6358658-6358731)
chr8 (77-186)||(28074629-28074738)
chr8 (77-195)||(28260178-28260296)
chr8 (113-198)||(24584650-24584734)
chr8 (203-282)||(26882365-26882445)
chr8 (200-263)||(5570216-5570279)
chr8 (77-175)||(35135310-35135408)
chr8 (80-175)||(12774737-12774830)
chr8 (25-114)||(29047178-29047267)
chr8 (200-280)||(13530180-13530260)
chr8 (200-280)||(13619719-13619799)
chr8 (131-195)||(29047262-29047326)
[»] chr4 (48 HSPs)
chr4 (52-195)||(34864160-34864302)
chr4 (25-195)||(15192311-15192480)
chr4 (25-185)||(47024603-47024762)
chr4 (25-185)||(18898100-18898259)
chr4 (28-195)||(17026537-17026703)
chr4 (25-195)||(25315069-25315238)
chr4 (29-195)||(12111169-12111332)
chr4 (25-149)||(51884756-51884879)
chr4 (52-198)||(19601903-19602048)
chr4 (52-195)||(31859765-31859907)
chr4 (28-173)||(5676329-5676474)
chr4 (25-173)||(27302907-27303054)
chr4 (52-175)||(13064553-13064676)
chr4 (25-159)||(1695684-1695817)
chr4 (25-174)||(5906600-5906749)
chr4 (52-195)||(23353730-23353868)
chr4 (52-153)||(7024083-7024184)
chr4 (25-185)||(10320058-10320216)
chr4 (56-195)||(33519138-33519276)
chr4 (200-286)||(5906795-5906881)
chr4 (201-277)||(34864367-34864443)
chr4 (77-153)||(46647344-46647420)
chr4 (52-191)||(9782849-9782986)
chr4 (53-174)||(17187301-17187422)
chr4 (100-186)||(9288326-9288412)
chr4 (200-277)||(12111407-12111482)
chr4 (81-165)||(17339707-17339792)
chr4 (200-284)||(1676370-1676454)
chr4 (200-284)||(1682898-1682982)
chr4 (200-311)||(25315306-25315418)
chr4 (52-175)||(29437598-29437711)
chr4 (200-306)||(9783058-9783165)
chr4 (52-138)||(21077397-21077483)
chr4 (208-284)||(1696652-1696726)
chr4 (199-299)||(22119586-22119687)
chr4 (52-141)||(22119782-22119870)
chr4 (52-153)||(26159905-26160005)
chr4 (200-284)||(18897947-18898031)
chr4 (201-284)||(25050141-25050224)
chr4 (77-142)||(32021954-32022018)
chr4 (200-268)||(4953654-4953722)
chr4 (231-277)||(15192166-15192212)
chr4 (101-179)||(18444373-18444451)
chr4 (77-186)||(10576569-10576678)
chr4 (215-263)||(5125581-5125629)
chr4 (200-263)||(27302755-27302818)
chr4 (77-118)||(13275631-13275672)
chr4 (200-284)||(31859955-31860039)
[»] chr3 (46 HSPs)
chr3 (56-195)||(19219079-19219218)
chr3 (53-190)||(19263769-19263909)
chr3 (25-195)||(33914405-33914574)
chr3 (25-185)||(10341904-10342064)
chr3 (71-195)||(11474954-11475078)
chr3 (67-191)||(16970573-16970697)
chr3 (52-180)||(18474292-18474420)
chr3 (27-185)||(18065914-18066072)
chr3 (52-175)||(19542988-19543111)
chr3 (25-195)||(21017985-21018154)
chr3 (200-278)||(33914637-33914715)
chr3 (28-195)||(25883211-25883377)
chr3 (61-185)||(25919345-25919468)
chr3 (25-157)||(1475117-1475248)
chr3 (76-186)||(26418836-26418946)
chr3 (25-195)||(27415276-27415444)
chr3 (69-195)||(28422560-28422685)
chr3 (52-185)||(5632407-5632539)
chr3 (27-175)||(23908110-23908258)
chr3 (200-307)||(25919539-25919647)
chr3 (52-173)||(8402415-8402537)
chr3 (80-153)||(21829025-21829098)
chr3 (202-285)||(1475357-1475441)
chr3 (25-117)||(11521350-11521442)
chr3 (49-195)||(2729484-2729625)
chr3 (203-308)||(19219289-19219395)
chr3 (77-153)||(25188906-25188983)
chr3 (202-285)||(12573244-12573328)
chr3 (202-285)||(13549708-13549792)
chr3 (52-195)||(12573398-12573540)
chr3 (52-195)||(13549862-13550004)
chr3 (200-277)||(21017840-21017917)
chr3 (199-273)||(10341763-10341836)
chr3 (200-278)||(13911227-13911305)
chr3 (55-141)||(30493132-30493218)
chr3 (196-273)||(10303427-10303504)
chr3 (28-157)||(13911403-13911530)
chr3 (199-259)||(8402624-8402684)
chr3 (101-153)||(26387758-26387810)
chr3 (200-263)||(11521117-11521180)
chr3 (200-309)||(25883033-25883143)
chr3 (212-308)||(17637034-17637131)
chr3 (200-240)||(2729693-2729733)
chr3 (200-285)||(12409413-12409498)
chr3 (202-306)||(25188691-25188796)
chr3 (78-130)||(19285270-19285322)
[»] scaffold0171 (3 HSPs)
scaffold0171 (53-195)||(21505-21647)
scaffold0171 (41-174)||(6324-6456)
scaffold0171 (200-284)||(6152-6236)
[»] scaffold0188 (2 HSPs)
scaffold0188 (42-195)||(26809-26962)
scaffold0188 (203-280)||(27032-27109)
[»] chr6 (28 HSPs)
chr6 (28-164)||(30355455-30355591)
chr6 (25-194)||(17860286-17860454)
chr6 (53-181)||(26499712-26499840)
chr6 (52-195)||(24507307-24507449)
chr6 (52-195)||(15575032-15575174)
chr6 (71-181)||(33638388-33638498)
chr6 (77-195)||(16439566-16439683)
chr6 (200-307)||(15574857-15574964)
chr6 (217-284)||(15576254-15576321)
chr6 (71-129)||(33638259-33638317)
chr6 (43-195)||(15998619-15998769)
chr6 (206-305)||(30355260-30355360)
chr6 (200-263)||(13759526-13759589)
chr6 (199-280)||(14924491-14924572)
chr6 (77-153)||(14924307-14924383)
chr6 (77-195)||(9396496-9396612)
chr6 (101-175)||(12972298-12972372)
chr6 (53-175)||(16387120-16387242)
chr6 (205-284)||(16527852-16527925)
chr6 (77-141)||(26512668-26512732)
chr6 (77-141)||(26517784-26517848)
chr6 (202-277)||(16387325-16387400)
chr6 (68-129)||(24618056-24618117)
chr6 (77-142)||(32930334-32930399)
chr6 (200-263)||(32930547-32930610)
chr6 (202-306)||(15998444-15998549)
chr6 (212-284)||(12972471-12972543)
chr6 (200-280)||(20495868-20495948)
[»] scaffold0650 (1 HSPs)
scaffold0650 (25-184)||(5607-5765)
[»] scaffold0011 (1 HSPs)
scaffold0011 (52-181)||(228051-228179)
[»] scaffold0065 (1 HSPs)
scaffold0065 (52-195)||(12352-12494)
[»] scaffold0282 (1 HSPs)
scaffold0282 (25-157)||(22451-22582)
[»] scaffold0337 (1 HSPs)
scaffold0337 (52-195)||(1916-2058)
[»] scaffold0386 (5 HSPs)
scaffold0386 (25-195)||(8546-8716)
scaffold0386 (131-195)||(13014-13078)
scaffold0386 (25-135)||(11636-11746)
scaffold0386 (203-307)||(8787-8892)
scaffold0386 (207-277)||(13153-13223)
[»] scaffold0190 (1 HSPs)
scaffold0190 (54-175)||(11564-11685)
[»] scaffold0362 (1 HSPs)
scaffold0362 (29-122)||(7799-7892)
[»] scaffold0002 (2 HSPs)
scaffold0002 (67-195)||(447084-447211)
scaffold0002 (231-308)||(446936-447014)
[»] scaffold1149 (1 HSPs)
scaffold1149 (52-111)||(1978-2037)
[»] scaffold0185 (1 HSPs)
scaffold0185 (52-118)||(2684-2750)
[»] scaffold0043 (1 HSPs)
scaffold0043 (52-150)||(58898-58999)


Alignment Details
Target: chr5 (Bit Score: 269; Significance: 1e-150; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 25 - 325
Target Start/End: Complemental strand, 30072393 - 30072093
Alignment:
Q  25 atcgttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttc 124  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  30072393 atcgttcttccgtttggaaacgcatacgaacttgaaatgaaatttcttcactttgtattgtctttaaaaaccttttaagaaccattaatcttcaatcttc 30072294  T
Q  125 atatctttgatccttcatgtgatgtcttgatttttcgattaacatgatttcccactacaaagcactcaaaatacttgttcctcaaaccattgacaactcc 224  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  30072293 atatctttgatccttcatgtgatgtcttgatttgtcgattaatatgatttcccactacaaagcactcaaaacacctgttcctcaaaccattgacaactcc 30072194  T
Q  225 tataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacatagccaaaataacacatgatgttccgtcatcaatatgcaaggtggaggt 324  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30072193 tctaattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacatagccaaaataacacatgatgttccgtcatcaatatgcaaggtggaggt 30072094  T
Q  325 t 325  Q
    |    
T  30072093 t 30072093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 25 - 195
Target Start/End: Original strand, 26329907 - 26330074
Alignment:
Q  25 atcgttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttc 124  Q
    ||||||||||||| || |||||| || |||||||||||||| |||||||||||||||||||||| ||||||||| |||| |||||||| |||||||||||    
T  26329907 atcgttcttccgtctgaaaactcctaggaacttgaaatgaattttcttcactttgtattgtcttaaaaaaccttctaaggaccattga-cttcaatcttc 26330005  T
Q  125 atatctttgatccttcatgtgatgtcttgatttttcgattaacatgatttcccactacaaagcactcaaaa 195  Q
    ||||| |||||||||||||||||||||||||||||| ||| |||||||||  ||||||||| |||||||||    
T  26330006 atatccttgatccttcatgtgatgtcttgatttttcaatttacatgattt--cactacaaaacactcaaaa 26330074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 25 - 195
Target Start/End: Original strand, 11274167 - 11274337
Alignment:
Q  25 atcgttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttc 124  Q
    ||||||||||||  || |||||| || ||||||||||||||||||| |||  |||||||||||||||| ||||| |||||||||||| ||||||||||||    
T  11274167 atcgttcttccgcatgaaaactcctaggaacttgaaatgaaatttcatcatcttgtattgtcttcaaagaccttctaagaaccattggtcttcaatcttc 11274266  T
Q  125 atatctttgatccttcatgtgatgtcttgatttttcgattaacatgatttcccactacaaagcactcaaaa 195  Q
    ||||| ||||||||||||||||||||||||||| |||||  ||||||||||  |||||||| |||||||||    
T  11274267 atatccttgatccttcatgtgatgtcttgatttgtcgatatacatgatttcttactacaaaacactcaaaa 11274337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 25 - 185
Target Start/End: Original strand, 16622514 - 16622673
Alignment:
Q  25 atcgttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttc 124  Q
    ||||||||||| | ||||||||| ||||||||||||||||| |||||||| |||||||||||||||||| |||| ||||||||| || ||||||||||||    
T  16622514 atcgttcttccatctggaaactcctacgaacttgaaatgaattttcttcaatttgtattgtcttcaaaa-ccttctaagaaccactggtcttcaatcttc 16622612  T
Q  125 atatctttgatccttcatgtgatgtcttgatttttcgattaacatgatttcccactacaaa 185  Q
    ||||| || |||||||||||||||||||||||| || ||| |||||||||| |||| ||||    
T  16622613 atatccttaatccttcatgtgatgtcttgatttgtcaatttacatgatttctcactgcaaa 16622673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 28 - 195
Target Start/End: Original strand, 25594533 - 25594699
Alignment:
Q  28 gttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcata 127  Q
    |||||||||| ||||||||| || ||||||||| |||| ||||||||||||| ||| ||| |||||||||| ||| | |||||||| |||||||||||||    
T  25594533 gttcttccgtctggaaactcctaggaacttgaa-tgaattttcttcactttgcattatctacaaaaaccttctaatatccattgatattcaatcttcata 25594631  T
Q  128 tctttgatccttcatgtgatgtcttgatttttcgattaacatgatttcccactacaaagcactcaaaa 195  Q
    || |||||| ||||||||||||||| ||||||||||| |||||||||| ||||| ||| |||||||||    
T  25594632 tccttgatcgttcatgtgatgtcttaatttttcgatttacatgatttctcactataaaacactcaaaa 25594699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 53 - 165
Target Start/End: Original strand, 18452677 - 18452789
Alignment:
Q  53 aacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtctt 152  Q
    ||||||||||||| ||||||||||||||||||| || ||||||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  18452677 aacttgaaatgaattttcttcactttgtattgttttaaaaaaccttataagaaccattgatcttcaattttcatatctttgatccctcatgtgatgtctt 18452776  T
Q  153 gatttttcgatta 165  Q
    ||||| |||||||    
T  18452777 gatttgtcgatta 18452789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 25 - 175
Target Start/End: Complemental strand, 17027804 - 17027655
Alignment:
Q  25 atcgttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttc 124  Q
    ||||||||| ||| ||||||||| || ||| ||||||| || ||||||||||||||||||||||||| |||||| |||||| |||| | |||||||||||    
T  17027804 atcgttctttcgtatggaaactcctaggaaattgaaattaattttcttcactttgtattgtcttcaagaaccttctaagaagcattaa-cttcaatcttc 17027706  T
Q  125 atatctttgatccttcatgtgatgtcttgatttttcgattaacatgatttc 175  Q
    |||||||||||| | || |||||||||||||||||||||| ||||||||||    
T  17027705 atatctttgatcttgcacgtgatgtcttgatttttcgatttacatgatttc 17027655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 25 - 195
Target Start/End: Complemental strand, 24842030 - 24841861
Alignment:
Q  25 atcgttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttc 124  Q
    ||||||||  ||| ||||||||| || |||| ||||||||| |||||||| ||||| |||||||||||| |||| ||||||||||||| ||||||||  |    
T  24842030 atcgttctgtcgtctggaaactcctaggaacatgaaatgaattttcttcattttgtgttgtcttcaaaatccttctaagaaccattga-cttcaatccac 24841932  T
Q  125 atatctttgatccttcatgtgatgtcttgatttttcgattaacatgatttcccactacaaagcactcaaaa 195  Q
    ||||| ||||||||||| ||| |||||||||||||| ||| |||||||||| ||||||||| |||| ||||    
T  24841931 atatccttgatccttcacgtgttgtcttgatttttcaatttacatgatttctcactacaaaacactaaaaa 24841861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 25 - 202
Target Start/End: Complemental strand, 22230081 - 22229905
Alignment:
Q  25 atcgttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttc 124  Q
    ||||||||||||| || |||||| || |||||||| |||   ||||||||||| ||||| ||||||| |||||| |||||||| |||||||||||| | |    
T  22230081 atcgttcttccgtctgaaaactcctaggaacttgagatgtgttttcttcacttggtattatcttcaacaaccttctaagaacccttgatcttcaat-tcc 22229983  T
Q  125 atatctttgatccttcatgtgatgtcttgatttttcgattaacatgatttcccactacaaagcactcaaaatacttgt 202  Q
    ||||||||||||||||| ||||||||||||||| | |||| |||||||| | |||||||||  || ||||| ||||||    
T  22229982 atatctttgatccttcacgtgatgtcttgatttgttgatttacatgattcctcactacaaaatacccaaaacacttgt 22229905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 53 - 195
Target Start/End: Complemental strand, 16634296 - 16634154
Alignment:
Q  53 aacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtctt 152  Q
    ||||||||||||| ||| ||||  ||||||| |||||||||||||| |||||||||||| ||||||| ||||||||  ||| ||||||| ||||||||||    
T  16634296 aacttgaaatgaatttttttcatcttgtattttcttcaaaaaccttctaagaaccattggtcttcaaacttcatattattgttccttcacgtgatgtctt 16634197  T
Q  153 gatttttcgattaacatgatttcccactacaaagcactcaaaa 195  Q
    ||||| |||||| | |||||||| |||| |||| || ||||||    
T  16634196 gatttgtcgatttatatgatttctcactgcaaaacattcaaaa 16634154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 52 - 200
Target Start/End: Complemental strand, 26070724 - 26070577
Alignment:
Q  52 gaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtct 151  Q
    ||||||||| |||| |||||  |  ||| |||||||||||||||||| || ||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  26070724 gaacttgaactgaattttctctaacttgcattgtcttcaaaaaccttatacgaaccatagatcttcaatcttcatatccttgatccttcatgtgatgtct 26070625  T
Q  152 tgatttttcgattaacatgatttcccactacaaagcactcaaaatactt 200  Q
    || |||  | ||| |||||||||| ||||| |||| |||||||| ||||    
T  26070624 tgttttgccaatttacatgatttctcactaaaaag-actcaaaacactt 26070577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 53 - 175
Target Start/End: Original strand, 7742735 - 7742857
Alignment:
Q  53 aacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtctt 152  Q
    ||||||||| ||  |||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||||||| ||| ||||| ||||||| ||    
T  7742735 aacttgaaacgatttttcttcactttgtattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgtttt 7742834  T
Q  153 gatttttcgattaacatgatttc 175  Q
    | |||   |||| ||||||||||    
T  7742835 gttttactgatttacatgatttc 7742857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 200 - 299
Target Start/End: Complemental strand, 24517394 - 24517295
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacatagccaaaataacacatgatgttc 299  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||| ||| |||||||| | |||||| ||| | ||||||    
T  24517394 tgttcctcaaaccattgacaactcctctaattctcatcttatttgtcttcaaatgcaaagcaaagaactaaaaacataactaaaatatcacttaatgttc 24517295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 200 - 285
Target Start/End: Original strand, 12340089 - 12340173
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacatagccaaaat 285  Q
    |||||||||||||||||||||||||| ||| ||||| ||||||||||||||||| ||||||||| |||| ||||||||||||||||    
T  12340089 tgttcctcaaaccattgacaactcctctaactctcaccttatttgtcttcaaatgcaaagaaaa-tactaaaaacatagccaaaat 12340173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 52 - 125
Target Start/End: Original strand, 19763750 - 19763823
Alignment:
Q  52 gaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttca 125  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||    
T  19763750 gaacttgaaatgaattttcttcactttgtattatcttcaaaaaccttctaagaacccttgatcttcaatcttca 19763823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 200 - 284
Target Start/End: Original strand, 17382110 - 17382194
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacatagccaaaa 284  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||| ||||||||| || ||||||| ||||    
T  17382110 tgttcctcaaaccattgacaactcctctaactctcatcttatttgtcttcaaatgcaaaaaaaagtactaaacacatagcaaaaa 17382194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 39 - 175
Target Start/End: Complemental strand, 24517609 - 24517473
Alignment:
Q  39 tggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatcct 138  Q
    ||||||||| || |||||||||||||| ||||||| |||| |||| |||| ||||||||| | | |||||||| ||| |||||||  |||| ||||||||    
T  24517609 tggaaactcctaggaacttgaaatgaattttcttcgctttctattatcttaaaaaaccttatgataaccattggtctgcaatctttgtatccttgatcct 24517510  T
Q  139 tcatgtgatgtcttgatttttcgattaacatgatttc 175  Q
    ||| ||||||| |||||||  ||||| ||||||||||    
T  24517509 tcacgtgatgtattgatttaccgatttacatgatttc 24517473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 200 - 284
Target Start/End: Original strand, 25594767 - 25594851
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacatagccaaaa 284  Q
    |||||||||||||||||| || |||| ||| ||||||||||||||||||||||| |||| ||||||||| |||||||||||||||    
T  25594767 tgttcctcaaaccattgagaaatcctctaactctcatcttatttgtcttcaaatgcaaataaaagtactaaaaacatagccaaaa 25594851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 52 - 192
Target Start/End: Original strand, 17381905 - 17382048
Alignment:
Q  52 gaacttgaaatgaaatttcttcactttgtatt---gtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatg 148  Q
    |||||||||||||| ||||||||  |||||||   ||||  ||||||  | |||||||||||| ||||||| ||||||||| |||||||||||  | |||    
T  17381905 gaacttgaaatgaactttcttcatcttgtattaatgtctcgaaaaacaatctaagaaccattggtcttcaaacttcatatccttgatccttcacattatg 17382004  T
Q  149 tcttgatttttcgattaacatgatttcccactacaaagcactca 192  Q
    |||||||||  ||||| |||||||||| ||||||||| ||||||    
T  17382005 tcttgatttgacgatttacatgatttctcactacaaaacactca 17382048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 52 - 186
Target Start/End: Complemental strand, 18178352 - 18178217
Alignment:
Q  52 gaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtct 151  Q
    |||||||| ||||| ||| |||| |||||||| |||||||| |||||  |||||| |||| ||||||||||||||||| | ||||||||||| | |||||    
T  18178352 gaacttgagatgaattttattcaatttgtattatcttcaaagaccttccaagaacaattggtcttcaatcttcatatcctcgatccttcatgcggtgtct 18178253  T
Q  152 tgattttt-cgattaacatgatttcccactacaaag 186  Q
    || ||||| | ||| |||||||||| ||||| ||||    
T  18178252 tgttttttccaatttacatgatttctcactaaaaag 18178217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 200 - 284
Target Start/End: Complemental strand, 17027567 - 17027483
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacatagccaaaa 284  Q
    ||||||||||||| ||||| || ||| ||| |||||||||| ||||||| |||| |||||||||||||| |||||||||||||||    
T  17027567 tgttcctcaaacccttgaccacgcctctaactctcatcttaattgtctttaaatgcaaagaaaagtactaaaaacatagccaaaa 17027483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 231 - 317
Target Start/End: Complemental strand, 22229818 - 22229731
Alignment:
Q  231 tctcatcttatttgtcttcaaatccaaagaaaagtact-taaaacatagccaaaataacacatgatgttccgtcatcaatatgcaagg 317  Q
    ||||||||||||||||||||||| ||||||||||||||  |||||||||||||||| ||| |||||| || |||||||| || |||||    
T  22229818 tctcatcttatttgtcttcaaatgcaaagaaaagtactaaaaaacatagccaaaatgacatatgatgctctgtcatcaacatccaagg 22229731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 76 - 285
Target Start/End: Original strand, 25075201 - 25075397
Alignment:
Q  76 tttgtattgtcttcaaaaaccttttaagaaccattgatcttcaat-cttcatatctttgatccttcatgtgatgtcttgatttttcgattaacatgattt 174  Q
    ||||| ||||||| || ||| ||||||||||| |||||||||||| ||||||  | |||||||||||  ||||||||||||||   |||| |||||||||    
T  25075201 tttgtgttgtctttaacaacattttaagaacccttgatcttcaattcttcat--ccttgatccttcacatgatgtcttgatttgatgatttacatgattt 25075298  T
Q  175 cccactacaaagcactcaaaatacttgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaac 274  Q
    |  |||||||| ||||||||| ||            | || |||||||||| ||| ||| || |||||||||||||| | ||||||||| |||| |||||    
T  25075299 cttactacaaaacactcaaaacac------------ctatggacaactcctctaactctaatattatttgtcttcaagtgcaaagaaaattactaaaaac 25075386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 76 - 285
Target Start/End: Original strand, 25133170 - 25133366
Alignment:
Q  76 tttgtattgtcttcaaaaaccttttaagaaccattgatcttcaat-cttcatatctttgatccttcatgtgatgtcttgatttttcgattaacatgattt 174  Q
    ||||| ||||||| || ||| ||||||||||| |||||||||||| ||||||  | |||||||||||  ||||||||||||||   |||| |||||||||    
T  25133170 tttgtgttgtctttaacaacattttaagaacccttgatcttcaattcttcat--ccttgatccttcacatgatgtcttgatttgatgatttacatgattt 25133267  T
Q  175 cccactacaaagcactcaaaatacttgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaac 274  Q
    |  |||||||| ||||||||| ||            | || |||||||||| ||| ||| || |||||||||||||| | ||||||||| |||| |||||    
T  25133268 cttactacaaaacactcaaaacac------------ctatggacaactcctctaactctaatattatttgtcttcaagtgcaaagaaaattactaaaaac 25133355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 52 - 141
Target Start/End: Original strand, 23157668 - 23157757
Alignment:
Q  52 gaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttca 141  Q
    |||||| ||||||| |||||||||||| | ||||||| ||| ||||| ||||||||||||| |||||||||| ||||| || ||||||||    
T  23157668 gaactttaaatgaactttcttcactttctgttgtctttaaataccttataagaaccattgaacttcaatcttaatatcctttatccttca 23157757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 32 - 185
Target Start/End: Complemental strand, 25680857 - 25680705
Alignment:
Q  32 ttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctt 131  Q
    |||||| ||||||||| ||  ||| ||||||||| |||||| |||||||||||| ||| |||||||| ||||||| ||||  ||| ||| ||| |||| |    
T  25680857 ttccgtctggaaactcctagaaacctgaaatgaattttctttactttgtattgttttctaaaaccttctaagaactattggccttaaat-ttcttatcct 25680759  T
Q  132 tgatccttcatgtgatgtcttgatttttcgattaacatgatttcccactacaaa 185  Q
    ||||||||||  |||| ||||| ||| |||||| |||||| |||  ||||||||    
T  25680758 tgatccttcacatgatttcttggtttgtcgatttacatgaattcttactacaaa 25680705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 72 - 198
Target Start/End: Original strand, 12339899 - 12340024
Alignment:
Q  72 tcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaa-tcttcatatctttgatccttcatgtgatgtcttgatttttcgattaacatg 170  Q
    ||||||||||||||||||||  ||||| |||||||| ||||| ||||| |||||  ||| ||||||||||| ||||||||||||||| | |||| | |||    
T  12339899 tcactttgtattgtcttcaacgaccttctaagaacccttgattttcaattcttc--atccttgatccttcacgtgatgtcttgatttgttgatttatatg 12339996  T
Q  171 atttcccactacaaagcactcaaaatac 198  Q
    ||| |  |||||||| ||| ||||||||    
T  12339997 attccttactacaaaacacgcaaaatac 12340024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 79 - 175
Target Start/End: Complemental strand, 20694863 - 20694767
Alignment:
Q  79 gtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtcttgatttttcgattaacatgatttc 175  Q
    |||||||||||||| ||||| ||||||||||| |||||||||||| || ||  | ||||||||| |||||||||| |||  ||||| ||||||||||    
T  20694863 gtattgtcttcaaataccttctaagaaccatttatcttcaatcttaatgtccgttatccttcatatgatgtcttgttttgccgatttacatgatttc 20694767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 284
Target Start/End: Complemental strand, 24841793 - 24841709
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacatagccaaaa 284  Q
    |||||||||||||||||| ||||||| ||  ||| | ||||||||||||||||| ||||||| |||||| |||||||||| ||||    
T  24841793 tgttcctcaaaccattgaaaactcctctatctctaaacttatttgtcttcaaatgcaaagaatagtactaaaaacatagcaaaaa 24841709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 88 - 181
Target Start/End: Original strand, 24410830 - 24410923
Alignment:
Q  88 tcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtcttgatttttcgattaacatgatttcccacta 181  Q
    ||||| ||||| ||||||||||||||||| |||||||| ||| | ||||||||||||||||||||  |||  | ||| |||||||||| |||||    
T  24410830 tcaaataccttataagaaccattgatcttgaatcttcagatcctcgatccttcatgtgatgtcttattttgccaattgacatgatttctcacta 24410923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 284
Target Start/End: Complemental strand, 18222533 - 18222449
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacatagccaaaa 284  Q
    |||| ||||||||||||||||||| | ||| |||||||||||||||||||||||  ||| |||| |||| |||| ||||| ||||    
T  18222533 tgtttctcaaaccattgacaactcatctaactctcatcttatttgtcttcaaatagaaataaaaatactaaaaatatagctaaaa 18222449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 307
Target Start/End: Original strand, 22967917 - 22968025
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacatagcc-aaaataacacatgatgtt 298  Q
    |||||||||||||||| ||||||||| |||    ||||||||||||||| | || ||||||||| |||| ||||||||||| |||||| || |||||  |    
T  22967917 tgttcctcaaaccattcacaactcctctaaaatccatcttatttgtcttaacatgcaaagaaaactactaaaaacatagcctaaaatatcatatgatact 22968016  T
Q  299 ccgtcatca 307  Q
    |||||||||    
T  22968017 ccgtcatca 22968025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 59 - 195
Target Start/End: Complemental strand, 25367836 - 25367702
Alignment:
Q  59 aaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtcttgatttt 158  Q
    ||||||| |||||||||||| |||| ||||||||   ||| ||||||||||||| ||| ||||||| |||| | |||  ||||||||||| |||  ||||    
T  25367836 aaatgaattttcttcactttctatt-tcttcaaatgtcttctaagaaccattgaactttaatcttcgtatcatcgatatttcatgtgatgcctttctttt 25367738  T
Q  159 tcgattaacatgatttcccactacaaagcactcaaaa 195  Q
     ||||| |||||||||| ||||| |||| ||||||||    
T  25367737 ccgatttacatgatttctcactaaaaag-actcaaaa 25367702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 309
Target Start/End: Complemental strand, 15205683 - 15205575
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaa-gaaaagtacttaaaacatagccaaaataacacatgatgtt 298  Q
    |||||||||||||| ||||||||||| |||  |||||||||||||| || |||| ||||  |||| |||| ||||||||| ||||||| || |||||| |    
T  15205683 tgttcctcaaaccactgacaactcctttaa--ctcatcttatttgtatttaaatgcaaataaaaaatactaaaaacatagtcaaaatatcatatgatgct 15205586  T
Q  299 ccgtcatcaat 309  Q
    | |||||||||    
T  15205585 ctgtcatcaat 15205575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 56 - 123
Target Start/End: Original strand, 22643773 - 22643840
Alignment:
Q  56 ttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatctt 123  Q
    |||||||||| |||||||| |||||||||| |||||| ||||||||||||||| |||| || ||||||    
T  22643773 ttgaaatgaattttcttcagtttgtattgtattcaaataccttttaagaaccactgatatttaatctt 22643840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 76 - 163
Target Start/End: Complemental strand, 24130854 - 24130765
Alignment:
Q  76 tttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatc--tttgatccttcatgtgatgtcttgatttttcgat 163  Q
    |||||||||| |||||||||||| ||||| |||||||| || | ||||||||||  | | |||||||||||||||||||| |||| ||||    
T  24130854 tttgtattgtattcaaaaaccttctaagatccattgatatttattcttcatatccttataatccttcatgtgatgtcttgtttttccgat 24130765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 285
Target Start/End: Original strand, 16622742 - 16622826
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacatagccaaaat 285  Q
    |||||||||||||||||||||||||| ||| |||  || |||||||||||||||  ||| |||| |||| |||||||||| |||||    
T  16622742 tgttcctcaaaccattgacaactcctttaactcttttcgtatttgtcttcaaatgtaaa-aaaaatactaaaaacatagctaaaat 16622826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 83 - 195
Target Start/End: Complemental strand, 22755114 - 22755002
Alignment:
Q  83 tgtcttcaaaaaccttttaagaaccattgatcttcaatcttcat--atctttgatccttcatgtgatgtcttgatttttcgattaacatgatttcccact 180  Q
    ||||||||| |||||| |||||||| |||||||||||  |||||  ||||||||||||  | || ||||||||||||   |||| |||||||||| ||||    
T  22755114 tgtcttcaacaaccttataagaacccttgatcttcaa--ttcattaatctttgatcctgtacgttatgtcttgatttgatgatttacatgatttctcact 22755017  T
Q  181 acaaagcactcaaaa 195  Q
     |||| |||||||||    
T  22755016 tcaaaacactcaaaa 22755002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 77 - 195
Target Start/End: Original strand, 11997782 - 11997901
Alignment:
Q  77 ttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatct-ttgatccttcatgtgatgtcttgatttttcgattaacatgatttc 175  Q
    ||||||| |||| ||||||||| ||| || |||||||||||| ||||||||||| ||||||||| ||  ||||||||| | |  ||||| ||||| ||||    
T  11997782 ttgtattatctttaaaaaccttctaaaaatcattgatcttcattcttcatatctcttgatccttaataagatgtcttgctctgccgatttacatgttttc 11997881  T
Q  176 ccactacaaagcactcaaaa 195  Q
     ||||| |||  ||||||||    
T  11997882 tcactaaaaaaaactcaaaa 11997901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 230 - 285
Target Start/End: Complemental strand, 22754958 - 22754903
Alignment:
Q  230 ttctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacatagccaaaat 285  Q
    ||||||||||||||||||| |||| |||||||| ||||| |||||||| |||||||    
T  22754958 ttctcatcttatttgtctttaaatgcaaagaaacgtactaaaaacatatccaaaat 22754903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 305
Target Start/End: Complemental strand, 26070512 - 26070409
Alignment:
Q  202 ttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacatagccaaaataacacatgatgttccg 301  Q
    |||||||||  ||||||||||||| ||| |  | ||||||||| ||| |||| |||||||||  ||| ||||||||||||||| | || ||||||||||     
T  26070512 ttcctcaaatgattgacaactcctctaaatgacctcttatttgccttaaaatgcaaagaaaataactaaaaacatagccaaaaaatcatatgatgttcca 26070413  T
Q  302 tcat 305  Q
    ||||    
T  26070412 tcat 26070409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 77 - 127
Target Start/End: Original strand, 17695352 - 17695402
Alignment:
Q  77 ttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcata 127  Q
    |||||||||||||||||||||| ||| ||||||||||||||| | ||||||    
T  17695352 ttgtattgtcttcaaaaaccttctaataaccattgatcttcattattcata 17695402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 263
Target Start/End: Original strand, 23157864 - 23157926
Alignment:
Q  201 gttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaa 263  Q
    ||||||||||||||||||||||||| |||||  | ||| ||||  |||||||| |||||||||    
T  23157864 gttcctcaaaccattgacaactcctctaattgacttctaattttccttcaaatgcaaagaaaa 23157926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 250
Target Start/End: Complemental strand, 25680636 - 25680586
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttgtcttca 250  Q
    |||||||||||||||||| || ||| |||| ||||||||| ||||||||||    
T  25680636 tgttcctcaaaccattgaaaaatccaataactctcatcttttttgtcttca 25680586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 273
Target Start/End: Original strand, 11274411 - 11274479
Alignment:
Q  205 ctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaa 273  Q
    ||||||||||||||||||  | ||  ||| |||||||| ||||| |||| |||||||||||||| ||||    
T  11274411 ctcaaaccattgacaactgatctatctcttatcttattggtctttaaatgcaaagaaaagtactaaaaa 11274479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 19331743 - 19331671
Alignment:
Q  69 tcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttca 141  Q
    ||||||| ||||||||||||||||   ||| ||| || ||||||  ||||||||||||||| | |||||||||    
T  19331743 tcttcacattgtattgtcttcaaatgtcttctaaaaatcattgaatttcaatcttcatatcctcgatccttca 19331671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 129; Significance: 9e-67; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 25 - 193
Target Start/End: Original strand, 11769831 - 11769999
Alignment:
Q  25 atcgttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttc 124  Q
    ||||||||||||| |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  11769831 atcgttcttccgtctggaaactcataggaacttgaaatgaattttcttcactttgtattgtcttcaaaaaccttctaagaaccattggtcttcaatcttc 11769930  T
Q  125 atatctttgatccttcatgtgatgtcttgatttttcgattaacatgatttcccactacaaagcactcaa 193  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||| |||| |||| |||||||    
T  11769931 atatctttgatcattcatgtgatgtcttgatttttcgatttacatgatttctcactgcaaaacactcaa 11769999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 56 - 185
Target Start/End: Original strand, 25494357 - 25494485
Alignment:
Q  56 ttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtcttgat 155  Q
    |||||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||| ||||| |||||||||||||||    
T  25494357 ttgaaatgaattttcttcactttgtattgtcttcaaaaaccttctaagaaccattggtcttcaatcttcatatc-ttgctccttaatgtgatgtcttgat 25494455  T
Q  156 ttttcgattaacatgatttcccactacaaa 185  Q
    || |||||| |||||||||| |||||||||    
T  25494456 ttgtcgatttacatgatttctcactacaaa 25494485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 64 - 195
Target Start/End: Original strand, 25727785 - 25727916
Alignment:
Q  64 aaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtcttgatttttcgat 163  Q
    |||||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||| || |||||||||||||| | ||||||| |||||    
T  25727785 aaatttcttcactttggattgtcttcaaaaaccttccaagaaccattgatcttcaatcttcatatccttaatccttcatgtgatatattgatttgtcgat 25727884  T
Q  164 taacatgatttcccactacaaagcactcaaaa 195  Q
    | |||||||||| ||||||||| |||||||||    
T  25727885 ttacatgatttctcactacaaaacactcaaaa 25727916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 64 - 195
Target Start/End: Original strand, 25736193 - 25736324
Alignment:
Q  64 aaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtcttgatttttcgat 163  Q
    |||||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||| || |||||||||||||| | ||||||| |||||    
T  25736193 aaatttcttcactttggattgtcttcaaaaaccttccaagaaccattgatcttcaatcttcatatccttaatccttcatgtgatatattgatttgtcgat 25736292  T
Q  164 taacatgatttcccactacaaagcactcaaaa 195  Q
    | |||||||||| ||||||||| |||||||||    
T  25736293 ttacatgatttctcactacaaaacactcaaaa 25736324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 25 - 190
Target Start/End: Original strand, 23519606 - 23519770
Alignment:
Q  25 atcgttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttc 124  Q
    ||||||||||||| || |||||| || ||||||||||| || |||||||||||| |||||||||||| |||||| |||||||||||| |||||||| |||    
T  23519606 atcgttcttccgtctgaaaactcctaggaacttgaaataaattttcttcactttctattgtcttcaacaaccttctaagaaccattggtcttcaat-ttc 23519704  T
Q  125 atatctttgatccttcatgtgatgtcttgatttttcgattaacatgatttcccactacaaagcact 190  Q
    ||||  ||||||||||| || |||||||||| | |||||| |||||||||| ||||||||| ||||    
T  23519705 atattcttgatccttcacgtaatgtcttgatgtgtcgatttacatgatttctcactacaaaacact 23519770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 29 - 195
Target Start/End: Complemental strand, 26657749 - 26657584
Alignment:
Q  29 ttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatat 128  Q
    ||||| ||| || |||||| || |||||||||||||| |||||||||||||| ||||||||||||||||| ||||||| ||||| |||| || ||||||     
T  26657749 ttctttcgtctgaaaactcctaggaacttgaaatgaattttcttcactttgttttgtcttcaaaaaccttataagaactattga-cttcgattttcatag 26657651  T
Q  129 ctttgatccttcatgtgatgtcttgatttttcgattaacatgatttcccactacaaagcactcaaaa 195  Q
    | |||||||||||  | |||||||||||| |||||| |||||||||  ||||||||| |||||||||    
T  26657650 ccttgatccttcacctaatgtcttgatttgtcgatttacatgatttttcactacaaaacactcaaaa 26657584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 42 - 195
Target Start/End: Complemental strand, 30675744 - 30675592
Alignment:
Q  42 aaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttca 141  Q
    |||||| || |||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| ||  |||||||||||    
T  30675744 aaactcctaggaacttgaaatgaattttcttcactttgtattatcttcaaaaaccttctaagaaccattgat-ttcaatcttcacattcttgatccttca 30675646  T
Q  142 tgtgatgtcttgatttttcgattaacatgatttcccactacaaagcactcaaaa 195  Q
      ||||||||| | ||  ||||| |||||||||| ||||| ||| |||||||||    
T  30675645 catgatgtcttaaattgccgatttacatgatttctcactataaaacactcaaaa 30675592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 67 - 195
Target Start/End: Original strand, 25730450 - 25730578
Alignment:
Q  67 tttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtcttgatttttcgattaa 166  Q
    ||||||||||||  |||||| |||||||||||  |||||||||||||||| ||||||||| || ||||||||||||||||| ||||||||| |||||| |    
T  25730450 tttcttcactttcgattgtcgtcaaaaaccttccaagaaccattgatcttaaatcttcatctccttgatccttcatgtgatatcttgatttgtcgattta 25730549  T
Q  167 catgatttcccactacaaagcactcaaaa 195  Q
    ||||||||| | ||||||| |||||||||    
T  25730550 catgatttctcgctacaaaacactcaaaa 25730578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 52 - 195
Target Start/End: Complemental strand, 30782010 - 30781868
Alignment:
Q  52 gaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaa-tcttcatatctttgatccttcatgtgatgtc 150  Q
    ||||||||||| || ||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||  ||| |||||||||||  |||||||    
T  30782010 gaacttgaaatcaattttcttcactttgtattgtcttcaacaaccttttaagaacccttgatcttcaattcttc--atccttgatccttcacatgatgtc 30781913  T
Q  151 ttgatttttcgattaacatgatttcccactacaaagcactcaaaa 195  Q
    |||||||   |||| |||||||| | ||||||||| |||||||||    
T  30781912 ttgatttgatgatttacatgattcctcactacaaaacactcaaaa 30781868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 42 - 173
Target Start/End: Original strand, 18300857 - 18300988
Alignment:
Q  42 aaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttca 141  Q
    |||||| || ||| ||||||| |  |||||||||| ||||||||||||||||||||| |||||||||||| | || |||||||||||| |||||||||||    
T  18300857 aaactcctaggaatttgaaataatttttcttcactctgtattgtcttcaaaaaccttctaagaaccattggtatttaatcttcatatccttgatccttca 18300956  T
Q  142 tgtgatgtcttgatttttcgattaacatgatt 173  Q
     ||||||||||||||| || ||| ||||||||    
T  18300957 cgtgatgtcttgatttgtctatttacatgatt 18300988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 25 - 152
Target Start/End: Complemental strand, 50047452 - 50047325
Alignment:
Q  25 atcgttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttc 124  Q
    |||||||||| ||| | |||||| || |||||| ||||||| |||||||| |||||||||||||||| ||||||||||| |||||||||||||||| |||    
T  50047452 atcgttcttctgttcgaaaactcctaggaacttaaaatgaattttcttcattttgtattgtcttcaataaccttttaagtaccattgatcttcaatattc 50047353  T
Q  125 atatctttgatccttcatgtgatgtctt 152  Q
    ||| | ||||||||||| ||||| ||||    
T  50047352 atacccttgatccttcacgtgatttctt 50047325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 52 - 175
Target Start/End: Original strand, 26854184 - 26854307
Alignment:
Q  52 gaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtct 151  Q
    |||||| ||||||| |||||||||||||||||||||||||| | ||| ||||||||||||| |||||||||||||||| |||||||||||  | ||||||    
T  26854184 gaacttcaaatgaattttcttcactttgtattgtcttcaaatatcttctaagaaccattgaacttcaatcttcatatcattgatccttcacttaatgtct 26854283  T
Q  152 tgatttttcgattaacatgatttc 175  Q
    || |||  || || ||||||||||    
T  26854284 tgttttgccggtttacatgatttc 26854307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 41 - 185
Target Start/End: Complemental strand, 23223675 - 23223530
Alignment:
Q  41 gaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttca-aaaaccttttaagaaccattgatcttcaatcttcatatctttgatcctt 139  Q
    ||||||| || |||||||||||||| ||| |||||||||||||||||||| |||||||| || |||  |||| | ||||||||||||||| ||||  |||    
T  23223675 gaaactcctaggaacttgaaatgaatttttttcactttgtattgtcttcaaaaaaccttctatgaattattggttttcaatcttcatatccttgaatctt 23223576  T
Q  140 catgtgatgtcttgatttttcgattaacatgatttcccactacaaa 185  Q
    |||| |||||||||| || | |||| |||||||||| |||||||||    
T  23223575 catgcgatgtcttgacttgttgatttacatgatttctcactacaaa 23223530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 25 - 120
Target Start/End: Original strand, 12423752 - 12423847
Alignment:
Q  25 atcgttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaat 120  Q
    ||||||||| |||||| |||||| || |||||||||||||| || |||||||||||||||||||||| |||||| |||||||| ||||||||||||    
T  12423752 atcgttctttcgtttgaaaactcctaggaacttgaaatgaatttccttcactttgtattgtcttcaacaaccttctaagaacctttgatcttcaat 12423847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 77 - 160
Target Start/End: Original strand, 27461070 - 27461153
Alignment:
Q  77 ttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtcttgatttttc 160  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||||||||| | |||| |||||||||||||||| ||||||    
T  27461070 ttgtattgtcttcaaaaaccttttaagaaccattgatcttcatacttcatatcctcgatctttcatgtgatgtcttgttttttc 27461153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 56 - 195
Target Start/End: Original strand, 52271113 - 52271251
Alignment:
Q  56 ttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtcttgat 155  Q
    |||||||||| |||||||||||||||||||||||||| ||||| |||| |||||||| |||||||||||||||| | ||||||||| |||  || ||| |    
T  52271113 ttgaaatgaattttcttcactttgtattgtcttcaaataccttctaagtaccattgaacttcaatcttcatatcctcgatccttcacgtggcgttttgtt 52271212  T
Q  156 ttttcgattaacatgatttcccactacaaagcactcaaaa 195  Q
    ||  ||||| |||| ||||| ||||| |||| ||||||||    
T  52271213 ttgccgatttacataatttctcactaaaaag-actcaaaa 52271251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 200 - 284
Target Start/End: Complemental strand, 23223451 - 23223367
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacatagccaaaa 284  Q
    |||||||||||||||||||||||||| ||| || ||||||| ||||||  |||| ||||||||||||||||||||||||||||||    
T  23223451 tgttcctcaaaccattgacaactcctctaactcccatcttaattgtctcaaaatgcaaagaaaagtacttaaaacatagccaaaa 23223367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 53 - 164
Target Start/End: Complemental strand, 26102306 - 26102195
Alignment:
Q  53 aacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtctt 152  Q
    ||||||| ||||| |||| |||  |||||||||||||||||||||| ||| || |||||||||||| |||||||||| |||||| |||| ||||||||||    
T  26102306 aacttgagatgaattttcctcaacttgtattgtcttcaaaaaccttctaaaaatcattgatcttcattcttcatatccttgatcattcacgtgatgtctt 26102207  T
Q  153 gatttttcgatt 164  Q
    | ||| ||||||    
T  26102206 gttttgtcgatt 26102195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 56 - 153
Target Start/End: Original strand, 19257674 - 19257769
Alignment:
Q  56 ttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtcttg 153  Q
    ||||||| || |||||||||||||||||||||||||| ||||| |||||||  ||||| ||||||||||||||| | |||| ||||||||||||||||    
T  19257674 ttgaaataaattttcttcactttgtattgtcttcaaagaccttctaagaac--ttgatgttcaatcttcatatcctcgatctttcatgtgatgtcttg 19257769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 129
Target Start/End: Complemental strand, 9328444 - 9328341
Alignment:
Q  25 atcgttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttc 124  Q
    ||||||||||| | ||||||||| || ||||||| | |||| ||||||||||| |||||||||||||||||||| ||||||| |||||  ||||||||||    
T  9328444 atcgttcttccatatggaaactcctaggaacttggactgaattttcttcacttagtattgtcttcaaaaaccttctaagaacgattga-attcaatcttc 9328346  T
Q  125 atatc 129  Q
    |||||    
T  9328345 atatc 9328341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 200 - 307
Target Start/End: Original strand, 12423989 - 12424097
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaag-aaaagtacttaaaacatagccaaaataacacatgatgtt 298  Q
    |||||||||||||||| ||||| ||| |   ||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||| || |||||| |    
T  12423989 tgttcctcaaaccattaacaacgcctctgtctctcatcttatttgtcttcaaatgcaaagaaaaagtactaaaaacatagccaaaatatcatatgatgct 12424088  T
Q  299 ccgtcatca 307  Q
    | |||||||    
T  12424089 ctgtcatca 12424097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 200 - 310
Target Start/End: Complemental strand, 50047221 - 50047110
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacatagcc-aaaataacacatgatgtt 298  Q
    |||| |||||| |||||||||||||| || || ||||||||||||||||||||| ||||||||||||   ||||||||||| |||||| || ||| | ||    
T  50047221 tgtttctcaaatcattgacaactcctctacttttcatcttatttgtcttcaaatgcaaagaaaagtatcaaaaacatagccaaaaatatcatatggtatt 50047122  T
Q  299 ccgtcatcaata 310  Q
    ||||||||||||    
T  50047121 ccgtcatcaata 50047110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 52 - 174
Target Start/End: Original strand, 15298735 - 15298856
Alignment:
Q  52 gaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtct 151  Q
    |||||||||||||| ||| ||||| |||||||| ||||||| | ||||||||||||||||||||| |||||||||||| | ||||||| |  |||| |||    
T  15298735 gaacttgaaatgaattttattcacattgtattg-cttcaaataacttttaagaaccattgatcttgaatcttcatatcctcgatcctttacatgatttct 15298833  T
Q  152 tgatttttcgattaacatgattt 174  Q
    || |||  ||||| |||||||||    
T  15298834 tgttttgccgatttacatgattt 15298856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 77 - 175
Target Start/End: Complemental strand, 31313777 - 31313679
Alignment:
Q  77 ttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtcttgatttttcgattaacatgatttc 175  Q
    |||||||||||||||||||||| |||||| |||||||||||| |||||||||  || |||||||| ||||||| ||| |||| | ||| ||||||||||    
T  31313777 ttgtattgtcttcaaaaaccttataagaatcattgatcttcattcttcatattcttaatccttcacgtgatgtattgtttttccaatttacatgatttc 31313679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 52 - 141
Target Start/End: Complemental strand, 25373996 - 25373907
Alignment:
Q  52 gaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttca 141  Q
    |||||||||||||| ||||||||  |||||||||||| || |||||| |||||||||||| |||| |||||||||||| | |||||||||    
T  25373996 gaacttgaaatgaattttcttcatcttgtattgtcttaaacaaccttctaagaaccattggtctttaatcttcatatcctggatccttca 25373907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 200 - 307
Target Start/End: Original strand, 8247732 - 8247840
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaa-gtacttaaaacatagccaaaataacacatgatgtt 298  Q
    |||||||||||||||||| | ||||| ||| ||||||||||||||||||||||| ||||||||| ||| | ||||||||| ||||||  || |||||| |    
T  8247732 tgttcctcaaaccattgatatctcctctaactctcatcttatttgtcttcaaatgcaaagaaaaggtattaaaaacatagtcaaaatgtcatatgatgct 8247831  T
Q  299 ccgtcatca 307  Q
    | |||||||    
T  8247832 ctgtcatca 8247840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 25 - 129
Target Start/End: Complemental strand, 9353289 - 9353186
Alignment:
Q  25 atcgttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttc 124  Q
    ||||||||||| | |||||||||||| ||||||| | |||| ||||||||||| ||||| |||||||||||||| ||||||  |||||  ||||||||||    
T  9353289 atcgttcttccatatggaaactcataggaacttggactgaattttcttcacttagtattttcttcaaaaaccttctaagaatgattga-attcaatcttc 9353191  T
Q  125 atatc 129  Q
    |||||    
T  9353190 atatc 9353186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 200 - 278
Target Start/End: Complemental strand, 12810362 - 12810284
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacatag 278  Q
    |||||||||||||||||||||||||| ||  ||||| |||||||||||| ||||  ||||||||||||| |||||||||    
T  12810362 tgttcctcaaaccattgacaactcctctatctctcaacttatttgtctttaaatataaagaaaagtactaaaaacatag 12810284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 81 - 174
Target Start/End: Original strand, 15416866 - 15416960
Alignment:
Q  81 attgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatat-ctttgatccttcatgtgatgtcttgatttttcgattaacatgattt 174  Q
    |||||||| ||||||||| ||||||||||||||||||| ||||||||| | ||||||||||||||| ||||||| |||  ||| | |||||||||    
T  15416866 attgtctttaaaaaccttataagaaccattgatcttcattcttcatatcccttgatccttcatgtggtgtcttgctttgccgaattacatgattt 15416960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 202 - 284
Target Start/End: Complemental strand, 26657514 - 26657432
Alignment:
Q  202 ttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacatagccaaaa 284  Q
    |||||||||||||||||||||||| ||  ||||| | ||||||||||||||| |||||||||||| | ||||||||| |||||    
T  26657514 ttcctcaaaccattgacaactcctctatctctcaacatatttgtcttcaaatgcaaagaaaagtaataaaaacatagtcaaaa 26657432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 200 - 284
Target Start/End: Complemental strand, 30675524 - 30675439
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaat-ccaaagaaaagtacttaaaacatagccaaaa 284  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||| |||||   |||||||||| || |||||||||| ||||    
T  30675524 tgttcctcaaaccattgacaactcctctaattttcatcttatttgtctacaaatgaaaaagaaaagttctaaaaacatagcaaaaa 30675439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 210 - 285
Target Start/End: Original strand, 21451900 - 21451976
Alignment:
Q  210 accattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaa-gtacttaaaacatagccaaaat 285  Q
    |||||||||||||| | ||  ||||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||    
T  21451900 accattgacaactcttctatctctcatcttatttgtcttcaaatgcaaagaaaacgtactaaaaacatagccaaaat 21451976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 200 - 263
Target Start/End: Original strand, 24903370 - 24903433
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaa 263  Q
    ||||||||||| |||||||||||||  ||||||||||| ||||||||||||||| |||||||||    
T  24903370 tgttcctcaaatcattgacaactccactaattctcatcatatttgtcttcaaatgcaaagaaaa 24903433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 9252447 - 9252532
Alignment:
Q  25 atcgttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccatt 110  Q
    ||||||||||  | || ||||||||| ||||||| | |||| ||||||||||| |||||||||||||||||||| ||| |||||||    
T  9252447 atcgttcttcaatctgaaaactcataggaacttggactgaattttcttcacttagtattgtcttcaaaaaccttctaataaccatt 9252532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 202 - 284
Target Start/End: Original strand, 18301080 - 18301164
Alignment:
Q  202 ttcctcaaaccattgacaactcctataattctcatcttat--ttgtcttcaaatccaaagaaaagtacttaaaacatagccaaaa 284  Q
    |||||||||||||||||||| ||||||| |||||| || |  |||||||||||| |||||||||||||  |||||||||| ||||    
T  18301080 ttcctcaaaccattgacaacccctataactctcattttttgtttgtcttcaaatgcaaagaaaagtaccaaaaacatagctaaaa 18301164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 203 - 284
Target Start/End: Original strand, 25730649 - 25730729
Alignment:
Q  203 tcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacatagccaaaa 284  Q
    ||||||| ||||||||| | ||| ||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||| ||||    
T  25730649 tcctcaagccattgacaccccctctaactctcatcttatttgttttcaaatgcaaagaaaagtac-taaaacatagcaaaaa 25730729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 93 - 174
Target Start/End: Complemental strand, 34381920 - 34381839
Alignment:
Q  93 aaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtcttgatttttcgattaacatgattt 174  Q
    |||||| ||| |||||||||||||||| ||||||||| |||||| |||| ||||||| ||||||| |||||| |||| ||||    
T  34381920 aaccttataacaaccattgatcttcaaacttcatatccttgatctttcacgtgatgttttgatttgtcgatttacattattt 34381839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 284
Target Start/End: Original strand, 11770069 - 11770153
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacatagccaaaa 284  Q
    ||||||| ||||||||||||| | || ||| ||||||||||||| ||||||||| ||||||| |||| | ||||||||| |||||    
T  11770069 tgttccttaaaccattgacaaattctctaactctcatcttatttatcttcaaatgcaaagaatagtattaaaaacatagacaaaa 11770153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 93 - 185
Target Start/End: Original strand, 23521635 - 23521726
Alignment:
Q  93 aaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtcttgatttttcgattaacatgatttcccactacaaa 185  Q
    |||||| |||||||||||| |||||||| |||||||   | |||||||| ||||||||||||| | |||||| |||||||||| |||||||||    
T  23521635 aaccttctaagaaccattggtcttcaat-ttcatattccttatccttcacgtgatgtcttgatgtgtcgatttacatgatttctcactacaaa 23521726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 217 - 296
Target Start/End: Complemental strand, 30781783 - 30781703
Alignment:
Q  217 acaactcctataattctcatcttatttgtcttcaaatccaaag-aaaagtacttaaaacatagccaaaataacacatgatg 296  Q
    ||||||||| ||| ||||||||||||||||||||||| ||||| |||| |||| |||||||||| |||||| | |||||||    
T  30781783 acaactcctctaactctcatcttatttgtcttcaaatgcaaagaaaaattactaaaaacatagcaaaaatatcgcatgatg 30781703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 81 - 158
Target Start/End: Original strand, 31319504 - 31319581
Alignment:
Q  81 attgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatct-ttgatccttcatgtgatgtcttgatttt 158  Q
    |||||||||||||| ||| ||||||||||||||||||| | ||||||||| ||||||||| ||||| ||||||| ||||    
T  31319504 attgtcttcaaaaaacttctaagaaccattgatcttcattattcatatctcttgatcctt-atgtggtgtcttgctttt 31319581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 121
Target Start/End: Complemental strand, 23506006 - 23505938
Alignment:
Q  52 gaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatc 121  Q
    |||||||||||||| ||||||||||||||||||||||||||   |||  ||| |||||||||||||||||    
T  23506006 gaacttgaaatgaattttcttcactttgtattgtcttcaaatgtcttccaag-accattgatcttcaatc 23505938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 52 - 152
Target Start/End: Complemental strand, 25126730 - 25126630
Alignment:
Q  52 gaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtct 151  Q
    |||||||||||||| |||||||| |||||||||| |||||| |  || ||||||| ||||||||  | || ||||||| |  |||||||| |||||||||    
T  25126730 gaacttgaaatgaattttcttcattttgtattgtattcaaagattttctaagaactattgatctgtagtcgtcatatcctcaatccttcacgtgatgtct 25126631  T
Q  152 t 152  Q
    |    
T  25126630 t 25126630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 152
Target Start/End: Complemental strand, 18391314 - 18391232
Alignment:
Q  71 ttcactttgtattgtcttcaaaaa-ccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtctt 152  Q
    |||| ||||||||||||| ||||| |||||||||||||||||||||||  | || | ||| || || ||||||||||||||||    
T  18391314 ttcattttgtattgtcttaaaaaaaccttttaagaaccattgatcttcgttttttaaatccttcattcttcatgtgatgtctt 18391232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 186
Target Start/End: Complemental strand, 21548898 - 21548764
Alignment:
Q  52 gaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtct 151  Q
    |||||| ||||||| ||| ||||  ||||||| ||||||||   ||| ||||||||||| | ||||||||||||||||    || ||| | |||||||||    
T  21548898 gaacttcaaatgaatttttttcaacttgtattatcttcaaatgtcttctaagaaccatttagcttcaatcttcatatccacaattctttacgtgatgtct 21548799  T
Q  152 tgatttttcgattaacatgatttcccactacaaag 186  Q
    || |||| ||||| || ||||||| ||||| ||||    
T  21548798 tgtttttccgatttacttgatttcacactagaaag 21548764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 100 - 195
Target Start/End: Original strand, 8247570 - 8247664
Alignment:
Q  100 taagaaccattgatcttcaat-cttcatatctttgatccttcatgtgatgtcttgatttttcgattaacatgatttcccactacaaagcactcaaaa 195  Q
    |||||||| |||||| ||||| ||||||  | |||||| |||| ||||||||||||||| | |||| |||||||| | ||||||||| |||||||||    
T  8247570 taagaacccttgatcctcaattcttcat--ccttgatctttcacgtgatgtcttgatttgttgatttacatgattcctcactacaaaacactcaaaa 8247664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 77 - 153
Target Start/End: Complemental strand, 18795407 - 18795330
Alignment:
Q  77 ttgtattgtcttcaaaaacctttta-agaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtcttg 153  Q
    |||||||||||| ||||| | || | |||| |||| ||||||| | |||||||||||||||| |||||||||||||||    
T  18795407 ttgtattgtcttaaaaaaaccttcatagaatcattcatcttcacttttcatatctttgatccatcatgtgatgtcttg 18795330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 298
Target Start/End: Complemental strand, 18795221 - 18795122
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacatagcc-aaaataacacatgatgtt 298  Q
    |||||||||||||||||| || |||| ||| |  | ||||||||  |||||||| |||||||||  |||  |||||||||| |||||| |||||||||||    
T  18795221 tgttcctcaaaccattgataaatcctctaaatgacctcttattttccttcaaatgcaaagaaaatcactagaaacatagcctaaaatatcacatgatgtt 18795122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 52 - 119
Target Start/End: Original strand, 25665634 - 25665701
Alignment:
Q  52 gaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaa 119  Q
    |||||| ||||||  |||||||||||||||||||||| ||| |  || ||||||||||||| ||||||    
T  25665634 gaacttcaaatgatttttcttcactttgtattgtctttaaatattttataagaaccattgaacttcaa 25665701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 284
Target Start/End: Original strand, 25266430 - 25266503
Alignment:
Q  210 accattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacatagccaaaa 284  Q
    ||||||||||||| || ||  ||| ||||| | ||||||||||| |||||||||||||| |||||||| ||||||    
T  25266430 accattgacaacttctctatctcttatctt-tctgtcttcaaatgcaaagaaaagtactaaaaacataaccaaaa 25266503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 273
Target Start/End: Original strand, 23519830 - 23519903
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaa 273  Q
    |||||||||||| ||| ||||||  | ||  ||||||| ||||||||||||||  |||||||||||||| ||||    
T  23519830 tgttcctcaaactattaacaacttttctatctctcatcatatttgtcttcaaaagcaaagaaaagtactaaaaa 23519903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 277
Target Start/End: Complemental strand, 34381748 - 34381671
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacata 277  Q
    ||||| |||||||||| ||||||||| ||| |  ||||||||||| |||||||| |||| |||| || | ||||||||    
T  34381748 tgttcttcaaaccattaacaactcctctaaattacatcttatttgccttcaaatgcaaataaaactaataaaaacata 34381671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 276
Target Start/End: Complemental strand, 18391122 - 18391046
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacat 276  Q
    |||| |||||||||||||||||| || ||| |  ||||||||||||||| |||| || ||||||  ||| |||||||    
T  18391122 tgttactcaaaccattgacaacttctttaaatgacatcttatttgtctttaaatacacagaaaataactaaaaacat 18391046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 244
Target Start/End: Original strand, 25494554 - 25494598
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttg 244  Q
    |||||||||||||||||||||||||| ||| | ||||| ||||||    
T  25494554 tgttcctcaaaccattgacaactcctctaactttcatcctatttg 25494598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 112; Significance: 1e-56; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 25 - 200
Target Start/End: Complemental strand, 29544797 - 29544622
Alignment:
Q  25 atcgttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttc 124  Q
    ||||||||||||| || |||||| || |||||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  29544797 atcgttcttccgtctgaaaactcctaggaacttgaaatgaattttcttcactttgtattgtcttcaaaaaccttctaagaatcattgatcttcaatcttc 29544698  T
Q  125 atatctttgatccttcatgtgatgtcttgatttttcgattaacatgatttcccactacaaagcactcaaaatactt 200  Q
    ||||||||||||||||||||||||||||| ||| |||||| |||||||| |  |||| ||| ||||||||| ||||    
T  29544697 atatctttgatccttcatgtgatgtcttggtttgtcgatttacatgattccttactaaaaaacactcaaaacactt 29544622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 25 - 185
Target Start/End: Complemental strand, 7494973 - 7494814
Alignment:
Q  25 atcgttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttc 124  Q
    ||||||||||||| ||||||||| ||  | |||||||| || ||||||||||||||||||||||||   ||||| ||||||||||| | |||||||||||    
T  7494973 atcgttcttccgtctggaaactcctagaatcttgaaataaattttcttcactttgtattgtcttcatggaccttctaagaaccattaa-cttcaatcttc 7494875  T
Q  125 atatctttgatccttcatgtgatgtcttgatttttcgattaacatgatttcccactacaaa 185  Q
    ||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  7494874 atatccttgatccttcatgtgatgtcttgatttttcaatttacatgatttcccactacaaa 7494814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 25 - 195
Target Start/End: Original strand, 20470647 - 20470817
Alignment:
Q  25 atcgttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttc 124  Q
    |||||||||| || |||||||||||||||||||||||| || |||||||| |||||||||||||||| |||||| ||||||||||||| ||||||| |||    
T  20470647 atcgttcttctgtctggaaactcatacgaacttgaaatcaattttcttcattttgtattgtcttcaagaaccttctaagaaccattgaacttcaatattc 20470746  T
Q  125 atatctttgatccttcatgtgatgtcttgatttttcgattaacatgatttcccactacaaagcactcaaaa 195  Q
    | ||| |||||| |||||| ||||||||||||| |||||| ||||| |||  ||||| ||| |||||||||    
T  20470747 acatccttgatcgttcatgcgatgtcttgatttgtcgatttacatgctttatcactataaaacactcaaaa 20470817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 25 - 174
Target Start/End: Original strand, 9801712 - 9801860
Alignment:
Q  25 atcgttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttc 124  Q
    ||||||||||| |||| |||||| || ||||||||||| || |||| |||||||||||| |||| ||||||||||||||||||||||| |||||||||||    
T  9801712 atcgttcttccatttgaaaactcctaggaacttgaaataaattttcctcactttgtattttctttaaaaaccttttaagaaccattga-cttcaatcttc 9801810  T
Q  125 atatctttgatccttcatgtgatgtcttgatttttcgattaacatgattt 174  Q
    ||||| |||||||||||  |||||| ||||||| |||||| |||||||||    
T  9801811 atatccttgatccttcacatgatgttttgatttgtcgatttacatgattt 9801860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 56 - 195
Target Start/End: Complemental strand, 23125147 - 23125008
Alignment:
Q  56 ttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtcttgat 155  Q
    |||||||||| |||||||||||||||||||||| || || ||| ||||||||||||| |||||||||||||||| | |||||||||  ||||||||||||    
T  23125147 ttgaaatgaattttcttcactttgtattgtctttaagaatcttataagaaccattgaacttcaatcttcatatcctcgatccttcacatgatgtcttgat 23125048  T
Q  156 ttttcgattaacatgatttcccactacaaagcactcaaaa 195  Q
    |  |||||| |||||||||| ||||| ||| |||||||||    
T  23125047 tggtcgatttacatgatttctcactagaaaacactcaaaa 23125008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 29 - 150
Target Start/End: Original strand, 21545668 - 21545789
Alignment:
Q  29 ttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatat 128  Q
    ||||| ||| ||||||||| ||  ||||||||||||| |||||||||||| ||||||||||||| || || |||||||||||||||||||||||||||||    
T  21545668 ttctttcgtctggaaactcctagaaacttgaaatgaattttcttcactttttattgtcttcaaatactttctaagaaccattgatcttcaatcttcatat 21545767  T
Q  129 ctttgatccttcatgtgatgtc 150  Q
    | ||||||||||| ||||||||    
T  21545768 ccttgatccttcacgtgatgtc 21545789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 52 - 195
Target Start/End: Complemental strand, 7142348 - 7142206
Alignment:
Q  52 gaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtct 151  Q
    ||||||| |||| | |||||| | |||||||| ||||||||||||| |||| |||||| ||  ||||||||||||||||||||||||||| |||||||||    
T  7142348 gaacttgcaatggattttctttaatttgtattctcttcaaaaacctattaaaaaccatcgaa-ttcaatcttcatatctttgatccttcacgtgatgtct 7142250  T
Q  152 tgatttttcgattaacatgatttcccactacaaagcactcaaaa 195  Q
    |||||| |||||| |||||||||| ||||||||| |||| ||||    
T  7142249 tgatttgtcgatttacatgatttctcactacaaaacacttaaaa 7142206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 28 - 175
Target Start/End: Complemental strand, 20017227 - 20017080
Alignment:
Q  28 gttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcata 127  Q
    |||||| |||||| |||||| || |||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||||||  |||||||||||||    
T  20017227 gttctttcgtttgtaaactcctaggaacttgaaatgaattttcttcactttgtattgtcttcaagaaccttctaagaaccattga-gttcaatcttcata 20017129  T
Q  128 tctttgatccttcatgtgatgtctt-gatttttcgattaacatgatttc 175  Q
    |  || ||||||||  ||||||||| ||||| ||||  |||||||||||    
T  20017128 tgcttaatccttcacatgatgtcttggatttgtcgagaaacatgatttc 20017080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 25 - 195
Target Start/End: Complemental strand, 21472072 - 21471904
Alignment:
Q  25 atcgttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaa-tctt 123  Q
    ||||||||||||| || |||||| || |||||||||||||| |||| |||||||||||| ||||||| |||||| |||||||| || |||||||| ||||    
T  21472072 atcgttcttccgtatgaaaactcctaggaacttgaaatgaa-tttcgtcactttgtattttcttcaataaccttctaagaaccctttatcttcaattctt 21471974  T
Q  124 catatctttgatccttcatgtgatgtcttgatttttcgattaacatgatttcccactacaaagcactcaaaa 195  Q
    |  ||| ||||||| ||| |||||||| |||||| | |||| |||||||| | ||||||||| |||||||||    
T  21471973 c--atccttgatccctcacgtgatgtcatgatttattgatttacatgattcctcactacaaaacactcaaaa 21471904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 25 - 195
Target Start/End: Complemental strand, 7815600 - 7815431
Alignment:
Q  25 atcgttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttc 124  Q
    ||||||||||||| || |||||| || |||||||||||||| ||||||||||||||||||||||||| |||||| |   |||  |||||||||||| |      
T  7815600 atcgttcttccgtctgaaaactcctatgaacttgaaatgaattttcttcactttgtattgtcttcaacaaccttctgtcaacttttgatcttcaat-tct 7815502  T
Q  125 atatctttgatccttcatgtgatgtcttgatttttcgattaacatgatttcccactacaaagcactcaaaa 195  Q
    ||||| |||||||||||  ||||||||| |||| | |||| ||||||||   ||||||||| |||||||||    
T  7815501 atatccttgatccttcacatgatgtctttatttgttgatttacatgattcatcactacaaaacactcaaaa 7815431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 52 - 181
Target Start/End: Complemental strand, 1074703 - 1074574
Alignment:
Q  52 gaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtct 151  Q
    ||||||||||| |  ||||||||  ||||||||||||||| ||||||||||||||||||| |||||||| |||||||| ||||||||| |  ||||||||    
T  1074703 gaacttgaaattacttttcttcatcttgtattgtcttcaacaaccttttaagaaccattggtcttcaattttcatatccttgatcctttacttgatgtct 1074604  T
Q  152 tgatttttcgattaacatgatttcccacta 181  Q
    || |||| | ||| |||||||||| |||||    
T  1074603 tgcttttccaatttacatgatttctcacta 1074574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 85 - 174
Target Start/End: Original strand, 9761313 - 9761401
Alignment:
Q  85 tcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtcttgatttttcgattaacatgattt 174  Q
    |||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||| |||||| |||||||||    
T  9761313 tctttaaaaaccttttaagaaccattga-cttcaatcttcatatccttgatccttcacgtgatgtcttgatttgtcgatttacatgattt 9761401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 25 - 157
Target Start/End: Complemental strand, 315450 - 315319
Alignment:
Q  25 atcgttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaa-tctt 123  Q
    ||||||||| ||| ||||||||| || |||||||||||||| ||| ||||||||||||||||||||| ||||||  ||||||  ||| ||||||| ||||    
T  315450 atcgttctttcgtctggaaactcctaggaacttgaaatgaattttattcactttgtattgtcttcaacaaccttcaaagaactgttgttcttcaactctt 315351  T
Q  124 catatctttgatccttcatgtgatgtcttgattt 157  Q
    |  |||||||||||||||  ||||||||||||||    
T  315350 c--atctttgatccttcacatgatgtcttgattt 315319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 200 - 284
Target Start/End: Complemental strand, 29544559 - 29544475
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacatagccaaaa 284  Q
    |||||||||||| ||||||||||||| ||| ||||||||||||||||||||||| ||||||||| || | |||||||||||||||    
T  29544559 tgttcctcaaactattgacaactcctctaactctcatcttatttgtcttcaaatgcaaagaaaattaataaaaacatagccaaaa 29544475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 29 - 157
Target Start/End: Complemental strand, 20446475 - 20446348
Alignment:
Q  29 ttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaa-tcttcata 127  Q
    ||||||| |||| | |||| || |||||| ||||||  ||| ||||||||||||||||||||| |||||| |||||||| ||||||||||| |||||  |    
T  20446475 ttcttccatttgaatactcttatgaacttaaaatgattttttttcactttgtattgtcttcaacaaccttctaagaacccttgatcttcaattcttc--a 20446378  T
Q  128 tctttgatccttcatgtgatgtcttgattt 157  Q
    ||||||||||||||  ||||||||||||||    
T  20446377 tctttgatccttcacttgatgtcttgattt 20446348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 200 - 285
Target Start/End: Original strand, 22067881 - 22067967
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaa-gaaaagtacttaaaacatagccaaaat 285  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||  |||| |||| ||||||||||||||||    
T  22067881 tgttcctcaaaccattgacaactcctttaactctcatcttatttgtcttcaaatgcaaataaaaattactaaaaacatagccaaaat 22067967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 200 - 284
Target Start/End: Original strand, 20470885 - 20470969
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacatagccaaaa 284  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||| ||  ||| ||||||||| |||||| ||||||||    
T  20470885 tgttcctcaaaccattgacaactcctctaattatcatcttatttgtcttcacatataaataaaagtactaaaaacaaagccaaaa 20470969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 30 - 129
Target Start/End: Original strand, 10670417 - 10670515
Alignment:
Q  30 tcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatc 129  Q
    |||||||| || |||||| ||||||||||||||||  ||| ||||||||||||||||||  |||||||| ||||||||||||| |||| |||||||||||    
T  10670417 tcttccgtctgaaaactcctacgaacttgaaatgatttttattcactttgtattgtcttagaaaaccttctaagaaccattga-cttcgatcttcatatc 10670515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 44 - 185
Target Start/End: Complemental strand, 9070646 - 9070506
Alignment:
Q  44 actcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatg 143  Q
    |||| |||||||||||| ||||  ||||||||||| ||||||||| ||||||||| |||||||  ||||| ||| || |||||||| ||||||||||| |    
T  9070646 actcctacgaacttgaactgaatattcttcactttatattgtcttaaaaaaccttctaagaacacttgat-ttcgatattcatatccttgatccttcacg 9070548  T
Q  144 tgatgtcttgatttttcgattaacatgatttcccactacaaa 185  Q
     |||||||| |||  || ||| |||||||||| |||| ||||    
T  9070547 cgatgtctttattcgtcaatttacatgatttctcacttcaaa 9070506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 52 - 141
Target Start/End: Complemental strand, 18496815 - 18496726
Alignment:
Q  52 gaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttca 141  Q
    |||||||||||||| ||||||||  ||||||| ||||||| ||| || |||||||||||  ||||||||||||||||| |||||||||||    
T  18496815 gaacttgaaatgaattttcttcatcttgtattttcttcaacaacattctaagaaccattattcttcaatcttcatatccttgatccttca 18496726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 80 - 136
Target Start/End: Original strand, 12358655 - 12358711
Alignment:
Q  80 tattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatc 136  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  12358655 tattgtcttcaaaaaccttctaagaaccattgatcttcaatcttcatatccttgatc 12358711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 208 - 307
Target Start/End: Complemental strand, 20446271 - 20446171
Alignment:
Q  208 aaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaag-aaaagtacttaaaacatagccaaaataacacatgatgttccgtcatc 306  Q
    |||||||||||||||||| |||||||||||||| |||||||||||| ||||| ||||||| | |||||||||| |||||| || ||| || || ||||||    
T  20446271 aaaccattgacaactcctctaattctcatcttaattgtcttcaaatgcaaagaaaaagtattaaaaacatagctaaaatatcatatgttgctctgtcatc 20446172  T
Q  307 a 307  Q
    |    
T  20446171 a 20446171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 181
Target Start/End: Original strand, 4977687 - 4977813
Alignment:
Q  54 acttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtcttg 153  Q
    |||| ||||||| ||| |||| |||||||| |||||||||  ||| ||| |||||| |  |||||||||||||||| | |||||||||||||||||||||    
T  4977687 acttcaaatgaattttgttcattttgtattttcttcaaaagtcttctaaaaaccatagc-cttcaatcttcatatcctcgatccttcatgtgatgtcttg 4977785  T
Q  154 atttttcgattaacatgatttcccacta 181  Q
    |||| |  ||| |||||||||| |||||    
T  4977786 atttgtatatttacatgatttctcacta 4977813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 42 - 195
Target Start/End: Original strand, 22067657 - 22067811
Alignment:
Q  42 aaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatc-ttcatatctttgatccttc 140  Q
    |||||| || |||||||||||||| | | ||||||||||||||||||||| |||||| |||||||| ||||| ||||||  |||||  | ||||||||||    
T  22067657 aaactcctaggaacttgaaatgaattcttttcactttgtattgtcttcaacaaccttctaagaacccttgattttcaattgttcat--ccttgatccttc 22067754  T
Q  141 atgtgatgtcttgatttttcgattaac--atgatttcccactacaaagcactcaaaa 195  Q
    |  ||||||||||||||   |||| ||  |||||| | ||||||||| |||||||||    
T  22067755 acatgatgtcttgatttgatgatttacatatgattcctcactacaaaacactcaaaa 22067811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 52 - 186
Target Start/End: Original strand, 24596868 - 24597002
Alignment:
Q  52 gaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtct 151  Q
    |||||| ||||||| ||||||||||||||||||||||||||   ||| || |||||| ||| |||||||||| ||||| | |||| | || |||||||||    
T  24596868 gaacttcaaatgaattttcttcactttgtattgtcttcaaatttcttctatgaaccactgaacttcaatctttatatcctcgatcttccacgtgatgtct 24596967  T
Q  152 tgatttttcgattaacatgatttcccactacaaag 186  Q
    || |||  ||||| ||| |||||| ||||| ||||    
T  24596968 tgttttgccgatttacacgatttctcactaaaaag 24597002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 71 - 181
Target Start/End: Complemental strand, 30405825 - 30405715
Alignment:
Q  71 ttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtcttgatttttcgattaacatg 170  Q
    ||||||||||||||| |||||| ||||| |||||| |||||| |||||||||||||||| | |||||||||  |||| ||||  |||  ||||| |||||    
T  30405825 ttcactttgtattgtattcaaataccttctaagaatcattgaacttcaatcttcatatcctcgatccttcacatgatttcttattttgccgatttacatg 30405726  T
Q  171 atttcccacta 181  Q
    ||||| |||||    
T  30405725 atttctcacta 30405715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 81 - 181
Target Start/End: Original strand, 22532538 - 22532637
Alignment:
Q  81 attgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtcttgatttttcgattaacatgatttcccact 180  Q
    ||||||||||||||| || |||||||||||||| |||| ||||| |||| | ||||| ||||||||||||||| |||  ||||| |||||||||| ||||    
T  22532538 attgtcttcaaaaactttctaagaaccattgatattcattcttcgtatcctcgatccatcatgtgatgtcttg-tttgccgatttacatgatttctcact 22532636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 25 - 120
Target Start/End: Complemental strand, 7493590 - 7493495
Alignment:
Q  25 atcgttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaat 120  Q
    ||||||||||| |||| |||||| ||  || ||| |||||| ||| |||| |||||||| ||||||| ||||||||||||||| ||||||||||||    
T  7493590 atcgttcttccctttgaaaactcctagaaatttggaatgaatttttttcattttgtattatcttcaataaccttttaagaacccttgatcttcaat 7493495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 42 - 173
Target Start/End: Original strand, 7777895 - 7778024
Alignment:
Q  42 aaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttca 141  Q
    |||||| || |||||||  ||||  |||||||||||| ||||||| |||| ||||||||||||| ||||  | |||||| |||||||| |||||||||||    
T  7777895 aaactcttaggaacttggtatgatttttcttcactttatattgtcctcaacaaccttttaagaa-cattagttttcaat-ttcatatcgttgatccttca 7777992  T
Q  142 tgtgatgtcttgatttttcgattaacatgatt 173  Q
     ||||||||||| ||| | |||| ||||||||    
T  7777993 cgtgatgtcttgctttgttgatttacatgatt 7778024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 194
Target Start/End: Original strand, 2630331 - 2630482
Alignment:
Q  42 aaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaa-tcttcatatctttgatccttc 140  Q
    |||||| || ||||||||||| || | |||||| ||| ||||||||| || ||||  ||||||||| ||||||||||| |||||  ||| ||||| ||||    
T  2630331 aaactcctaggaacttgaaattaattgtcttcaatttttattgtctttaacaaccaattaagaacccttgatcttcaattcttc--atccttgattcttc 2630428  T
Q  141 atgtgatgtcttgatttttcgattaacatgatttcccactacaaagcactcaaa 194  Q
    |  ||||||||||||||   |||| |||||||| | ||||||||| ||||||||    
T  2630429 acatgatgtcttgatttgatgatttacatgattcctcactacaaaacactcaaa 2630482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 141
Target Start/End: Original strand, 5312665 - 5312739
Alignment:
Q  67 tttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttca 141  Q
    ||||||||  |||||||||||||||||| ||| ||||||||||| || ||||||| ||||||| |||||||||||    
T  5312665 tttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttca 5312739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 77 - 186
Target Start/End: Original strand, 3268855 - 3268964
Alignment:
Q  77 ttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtcttgatttttcgattaacatgatttcc 176  Q
    ||||||||| |  ||||| |||||||||| |||| || |||| |||||||||  ||||||||||||||||| ||||| |||  ||||| ||||||||||     
T  3268855 ttgtattgtttataaaaagcttttaagaatcattaattttcattcttcatatacttgatccttcatgtgatatcttgttttgccgatttacatgatttct 3268954  T
Q  177 cactacaaag 186  Q
    ||||| ||||    
T  3268955 cactaaaaag 3268964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 284
Target Start/End: Complemental strand, 7142138 - 7142054
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacatagccaaaa 284  Q
    ||||||| |||||||||||||||| |||   ||||| |||||||||||| |||| ||||||||| || | |||||||||||||||    
T  7142138 tgttccttaaaccattgacaactcatatctctctcaacttatttgtctttaaatgcaaagaaaactattaaaaacatagccaaaa 7142054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 208 - 295
Target Start/End: Complemental strand, 7815355 - 7815267
Alignment:
Q  208 aaaccattgacaactcctataattctcatcttatttgtcttcaaatccaa-agaaaagtacttaaaacatagccaaaataacacatgat 295  Q
    ||||||||||||| |||| ||| ||||||||||||| ||||||||| ||| | ||||||||| |||||||| |||||||| || |||||    
T  7815355 aaaccattgacaagtcctttaactctcatcttatttatcttcaaatgcaacaaaaaagtactaaaaacataaccaaaatatcatatgat 7815267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 53 - 186
Target Start/End: Original strand, 20461511 - 20461646
Alignment:
Q  53 aacttgaaatgaaatttcttcactttgtattgtct--tcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtc 150  Q
    ||||||||| ||| || ||||||||||||||||||  | ||| |||||  ||||| |  || ||||||||||||||||| |||||||||||  |||||||    
T  20461511 aacttgaaaggaatttacttcactttgtattgtctcttaaaataccttgcaagaatcggtggtcttcaatcttcatatccttgatccttcacttgatgtc 20461610  T
Q  151 ttgatttttcgattaacatgatttcccactacaaag 186  Q
    ||  |||  ||||| |||||||||| ||||| ||||    
T  20461611 ttattttgccgatttacatgatttctcactaaaaag 20461646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 206 - 295
Target Start/End: Complemental strand, 315219 - 315129
Alignment:
Q  206 tcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaag-aaaagtacttaaaacatagccaaaataacacatgat 295  Q
    |||||||||||||||||||| ||| ||||||||||||| |||||||||   ||| ||||||||  ||||||||| ||||||| || |||||    
T  315219 tcaaaccattgacaactcctctaactctcatcttatttttcttcaaatattaagaaaaagtaccgaaaacatagtcaaaatatcatatgat 315129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 202 - 252
Target Start/End: Original strand, 1255290 - 1255340
Alignment:
Q  202 ttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaa 252  Q
    |||||||||||||||||||||||| ||| ||||| ||||||||||||||||    
T  1255290 ttcctcaaaccattgacaactcctctaactctcaacttatttgtcttcaaa 1255340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 77 - 135
Target Start/End: Complemental strand, 14649721 - 14649663
Alignment:
Q  77 ttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgat 135  Q
    |||||||||||||||||||||| ||| ||||||||||||||| | |||||||| |||||    
T  14649721 ttgtattgtcttcaaaaaccttctaataaccattgatcttcattattcatatccttgat 14649663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 200 - 278
Target Start/End: Complemental strand, 23124940 - 23124863
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacatag 278  Q
    ||||||||| |||| | ||||||||| ||| |||||||||||||||||||||||  |||| |||||||| |||||||||    
T  23124940 tgttcctcagaccactaacaactcctctaaatctcatcttatttgtcttcaaatgtaaag-aaagtactaaaaacatag 23124863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 153
Target Start/End: Complemental strand, 46054921 - 46054845
Alignment:
Q  76 tttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtcttg 153  Q
    |||||||||||||||| ||| || ||||| | ||| ||||||||||||||||||||| |||||| |||||| ||||||    
T  46054921 tttgtattgtcttcaacaactttgtaagatc-attaatcttcaatcttcatatctttaatcctttatgtgacgtcttg 46054845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 52 - 175
Target Start/End: Original strand, 3487232 - 3487353
Alignment:
Q  52 gaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtct 151  Q
    |||||| |||||||  ||||||||||||||||||||| |||   ||| | |||  | ||||| ||| ||||| ||||| |||||||||||| ||||||||    
T  3487232 gaacttcaaatgaa--ttcttcactttgtattgtcttaaaatgtcttctgagagtcgttgatgttcgatctttatatcattgatccttcatttgatgtct 3487329  T
Q  152 tgatttttcgattaacatgatttc 175  Q
    || |||  ||||| ||||||||||    
T  3487330 tgttttgccgattcacatgatttc 3487353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 212 - 307
Target Start/End: Complemental strand, 21471825 - 21471729
Alignment:
Q  212 cattgacaactcctataattctcatcttatttgtcttcaaatccaaag-aaaagtacttaaaacatagccaaaataacacatgatgttccgtcatca 307  Q
    ||||||||| |||| ||| | ||||||||||||||||||||| ||| | ||||||||| |||||||| |||||||  || |||||| || |||||||    
T  21471825 cattgacaaatcctctaaatatcatcttatttgtcttcaaatgcaaggaaaaagtactaaaaacataaccaaaatggcatatgatgctctgtcatca 21471729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 110 - 195
Target Start/End: Original strand, 1255135 - 1255220
Alignment:
Q  110 tgatcttcaatcttcatatctttgatccttcatgtgatgtcttgatttttcgattaacatgatttcccactacaaagcactcaaaa 195  Q
    ||||||||| ||||| |||| ||||||||||||||||||| ||||||| | |||| | || ||||  || |||||| |||||||||    
T  1255135 tgatcttcattcttcgtatccttgatccttcatgtgatgttttgatttgttgatttaaataatttttcattacaaaacactcaaaa 1255220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 52 - 113
Target Start/End: Original strand, 8308900 - 8308961
Alignment:
Q  52 gaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgat 113  Q
    |||||||| |||||  ||||| | ||||||||||||||||| ||||| ||||||||||||||    
T  8308900 gaacttgatatgaatcttctttattttgtattgtcttcaaagaccttctaagaaccattgat 8308961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 173
Target Start/End: Original strand, 2353131 - 2353227
Alignment:
Q  78 tgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatat-ctttgatccttcatgtgatgtcttgatttttcgattaacatgatt 173  Q
    ||||||||||  ||| ||||| ||| ||||||||||||||| | |||| || | ||||||| ||||| ||||||||| ||| |||||| ||||||||    
T  2353131 tgtattgtctataaacaccttctaataaccattgatcttcatttttcacatccattgatccatcatgagatgtcttgctttgtcgatttacatgatt 2353227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 92
Target Start/End: Complemental strand, 4829038 - 4828998
Alignment:
Q  52 gaacttgaaatgaaatttcttcactttgtattgtcttcaaa 92  Q
    |||||||||||||| | ||||||||||||||||||||||||    
T  4829038 gaacttgaaatgaattatcttcactttgtattgtcttcaaa 4828998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 181
Target Start/End: Complemental strand, 9755983 - 9755915
Alignment:
Q  113 tcttcaatcttcatatctttgatccttcatgtgatgtcttgatttttcgattaacatgatttcccacta 181  Q
    |||| |||||||||||| |||||||||||  |||||||| ||||| ||||||  ||||||||| |||||    
T  9755983 tctttaatcttcatatcgttgatccttcacatgatgtctagatttgtcgatttgcatgatttctcacta 9755915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 181
Target Start/End: Complemental strand, 9800779 - 9800711
Alignment:
Q  113 tcttcaatcttcatatctttgatccttcatgtgatgtcttgatttttcgattaacatgatttcccacta 181  Q
    |||| |||||||||||| |||||||||||  |||||||| ||||| ||||||  ||||||||| |||||    
T  9800779 tctttaatcttcatatcattgatccttcacatgatgtctagatttctcgatttgcatgatttctcacta 9800711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 125
Target Start/End: Original strand, 10253629 - 10253677
Alignment:
Q  77 ttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttca 125  Q
    |||||||||||||||||||| | |||| | |||||||||||||||||||    
T  10253629 ttgtattgtcttcaaaaaccctataagtatcattgatcttcaatcttca 10253677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 185
Target Start/End: Complemental strand, 10292989 - 10292872
Alignment:
Q  67 tttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaat-cttcatatctttgatccttcatgtgatgtcttgatttttcgatta 165  Q
    ||||||| |||| |||||| |||||| ||||| |||||||| |||||||||| | ||||||  | || ||||||||  ||||||||||||||   ||||     
T  10292989 tttcttccctttttattgtattcaaacaccttctaagaacccttgatcttcagttcttcat--cctttatccttcacatgatgtcttgatttgatgattt 10292892  T
Q  166 acatgatttcccactacaaa 185  Q
    |||||||| | |||||||||    
T  10292891 acatgattcctcactacaaa 10292872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 284
Target Start/End: Original strand, 19140085 - 19140133
Alignment:
Q  236 tcttatttgtcttcaaatccaaagaaaagtacttaaaacatagccaaaa 284  Q
    |||| ||||||||||||| |||||||||  |||||||||||||||||||    
T  19140085 tcttttttgtcttcaaatgcaaagaaaataacttaaaacatagccaaaa 19140133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 284
Target Start/End: Original strand, 20739484 - 20739532
Alignment:
Q  236 tcttatttgtcttcaaatccaaagaaaagtacttaaaacatagccaaaa 284  Q
    |||| ||||||||||||| |||||||||  |||||||||||||||||||    
T  20739484 tcttttttgtcttcaaatgcaaagaaaataacttaaaacatagccaaaa 20739532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 284
Target Start/End: Original strand, 21545874 - 21545957
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacatagccaaaa 284  Q
    |||||||||||||||||||||||  | ||||| |||||||  ||||||||||    ||||||||||||| ||||||||| |||||    
T  21545874 tgttcctcaaaccattgacaacttatttaattatcatctt-gttgtcttcaatggaaaagaaaagtactaaaaacatagtcaaaa 21545957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 53 - 195
Target Start/End: Original strand, 7372434 - 7372572
Alignment:
Q  53 aacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtctt 152  Q
    |||||||||| || ||||||||| |||||||||||| ||||| ||| |||| | |||||| |||| | ||| ||||| |||||||||||  |||| ||||    
T  7372434 aacttgaaataaattttcttcac-ttgtattgtctttaaaaatcttctaag-atcattgaacttccagctttatatccttgatccttca--tgatatctt 7372529  T
Q  153 gatttttcgattaacatgatttcccactacaaagcactcaaaa 195  Q
    |||||   |||| ||| |||||| ||||| ||| |||| ||||    
T  7372530 gatttgctgatttacaagatttctcactaaaaaacactgaaaa 7372572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 284
Target Start/End: Complemental strand, 7494751 - 7494667
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacatagccaaaa 284  Q
    |||||||||||||||| ||||||  | ||  ||||| | | ||||||||||| | |||||||||||||| |||  ||||||||||    
T  7494751 tgttcctcaaaccattaacaactattttatctctcaacctgtttgtcttcaagtgcaaagaaaagtactaaaagaatagccaaaa 7494667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 265
Target Start/End: Complemental strand, 9385527 - 9385463
Alignment:
Q  201 gttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagt 265  Q
    |||| |||||||||| ||||||||  ||  |||||||||| |||||||||||| ||| |||||||    
T  9385527 gttcatcaaaccattaacaactccactatctctcatcttaattgtcttcaaatgcaaggaaaagt 9385463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 28951863 - 28951895
Alignment:
Q  77 ttgtattgtcttcaaaaaccttttaagaaccat 109  Q
    ||||||||||||||||||||||||||| |||||    
T  28951863 ttgtattgtcttcaaaaaccttttaagtaccat 28951895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 263
Target Start/End: Complemental strand, 46054739 - 46054675
Alignment:
Q  199 ttgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaa 263  Q
    |||||||||||| || ||||||||||| ||| |  ||||||||||| |||||||| |||| ||||    
T  46054739 ttgttcctcaaatcaatgacaactcctttaaatgacatcttatttgccttcaaatacaaaaaaaa 46054675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 103; Significance: 3e-51; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 25 - 195
Target Start/End: Original strand, 27417100 - 27417270
Alignment:
Q  25 atcgttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttc 124  Q
    ||||||||||||| ||||||||| |  |||||||||||||| ||||||||||||||||||| |||||||||||| | |||||||||| |||||||  |||    
T  27417100 atcgttcttccgtctggaaactccttggaacttgaaatgaattttcttcactttgtattgttttcaaaaaccttcttagaaccattggtcttcaacattc 27417199  T
Q  125 atatctttgatccttcatgtgatgtcttgatttttcgattaacatgatttcccactacaaagcactcaaaa 195  Q
    ||||| ||||||||||||||||||||||||||| |||||| |||||||||| ||||||||| |||| ||||    
T  27417200 atatcattgatccttcatgtgatgtcttgatttgtcgatttacatgatttctcactacaaaacacttaaaa 27417270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 25 - 195
Target Start/End: Complemental strand, 30999048 - 30998879
Alignment:
Q  25 atcgttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttc 124  Q
    |||||||||||||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||||| |||||| |||||||| |||||||||||| | |    
T  30999048 atcgttcttccgtttgaaaactcatatgaacttgaaatgaattttctccactttgtattgtcttcaacaaccttctaagaacccttgatcttcaat-tac 30998950  T
Q  125 atatctttgatccttcatgtgatgtcttgatttttcgattaacatgatttcccactacaaagcactcaaaa 195  Q
    ||||| |||||||||||  |||| ||||||||| |||||| |||| | |   ||||||||| |||||||||    
T  30998949 atatccttgatccttcacttgatatcttgatttgtcgatttacatcactcttcactacaaaacactcaaaa 30998879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 52 - 200
Target Start/End: Original strand, 18236167 - 18236314
Alignment:
Q  52 gaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtct 151  Q
    |||||||||||||| ||||||||  ||||||||||||||| |||||| ||||||||||||  ||||||||||||||| | ||||||||||||||||||||    
T  18236167 gaacttgaaatgaattttcttcatcttgtattgtcttcaacaaccttctaagaaccattggccttcaatcttcatatttgtgatccttcatgtgatgtct 18236266  T
Q  152 tgatttttcgattaacatgatttcccactacaaagcactcaaaatactt 200  Q
    || |||  ||| | |||||||||| ||||| |||| |||||||||||||    
T  18236267 tgttttgccgagttacatgatttctcactaaaaag-actcaaaatactt 18236314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 56 - 195
Target Start/End: Original strand, 21505007 - 21505146
Alignment:
Q  56 ttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtcttgat 155  Q
    |||||||||| ||||||||  |||||||||||||||||||||| | |||||||||| ||||||| ||||| ||| |||||| ||||||||||||||| ||    
T  21505007 ttgaaatgaattttcttcaacttgtattgtcttcaaaaaccttctcagaaccattggtcttcaaacttcacatccttgatctttcatgtgatgtcttaat 21505106  T
Q  156 ttttcgattaacatgatttcccactacaaagcactcaaaa 195  Q
    || |||||| |||||||| | ||||||||| |||||||||    
T  21505107 ttatcgatttacatgattcctcactacaaaacactcaaaa 21505146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 54 - 195
Target Start/End: Complemental strand, 24188217 - 24188077
Alignment:
Q  54 acttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtcttg 153  Q
    ||||| ||||||  |||||||||||||||||||||||||||| || ||||| | |||| ||||||||||||||||  |||||||||||||||||| ||||    
T  24188217 acttggaatgaatcttcttcactttgtattgtcttcaaaaactttctaagatctattg-tcttcaatcttcatattcttgatccttcatgtgatgccttg 24188119  T
Q  154 atttttcgattaacatgatttcccactacaaagcactcaaaa 195  Q
    |||  |||||| |||||||||| |||||||||  ||||||||    
T  24188118 attggtcgatttacatgatttctcactacaaaatactcaaaa 24188077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 41 - 192
Target Start/End: Original strand, 16593604 - 16593754
Alignment:
Q  41 gaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttca-atcttcatatctttgatcctt 139  Q
    ||||||| || |||||||||||||| ||||||||||||||||||||||||| |||||| |||||||| ||||||||||  |||||  ||| |||||||||    
T  16593604 gaaactcctaggaacttgaaatgaattttcttcactttgtattgtcttcaacaaccttctaagaacccttgatcttcatttcttc--atcgttgatcctt 16593701  T
Q  140 catgtgatgtcttgatttttcgattaacatgatttcccactacaaagcactca 192  Q
    ||  ||||||||||||||   |||| ||||||||   ||||||||| ||||||    
T  16593702 caaatgatgtcttgatttgatgatttacatgattcttcactacaaaacactca 16593754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 203 - 307
Target Start/End: Original strand, 21505217 - 21505322
Alignment:
Q  203 tcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacatagcc-aaaataacacatgatgttccg 301  Q
    |||||||||||||||||||| || ||| ||||||||||||||||||||||| ||||||||| |||| ||||||||||| |||||| || |||||| ||||    
T  21505217 tcctcaaaccattgacaactactctaactctcatcttatttgtcttcaaatgcaaagaaaaatactaaaaacatagccaaaaatatcatatgatgctccg 21505316  T
Q  302 tcatca 307  Q
    ||||||    
T  21505317 tcatca 21505322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 67 - 195
Target Start/End: Complemental strand, 22511181 - 22511053
Alignment:
Q  67 tttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtcttgatttttcgattaa 166  Q
    |||||||| || |||||||||||||||||| | || ||| |||||| | |||||||||||||| |  ||| ||||  ||||||||||||||||||||| |    
T  22511181 tttcttcatttcgtattgtcttcaaaaaccatctatgaatcattgaacatcaatcttcatatcctcaatctttcacttgatgtcttgatttttcgattta 22511082  T
Q  167 catgatttcccactacaaagcactcaaaa 195  Q
    ||||||||| ||||||||| || ||||||    
T  22511081 catgatttctcactacaaaacaatcaaaa 22511053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 52 - 175
Target Start/End: Complemental strand, 1732801 - 1732678
Alignment:
Q  52 gaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtct 151  Q
    ||||||||||| || ||| |||| ||||||||| ||||||| |  || |||||| ||||||||||||||||||||||  || ||||||||||||||||||    
T  1732801 gaacttgaaataaattttattcattttgtattgccttcaaatatattctaagaatcattgatcttcaatcttcatattcttaatccttcatgtgatgtct 1732702  T
Q  152 tgatttttcgattaacatgatttc 175  Q
    || ||| || ||| ||||||||||    
T  1732701 tgttttgtcaatttacatgatttc 1732678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 52 - 195
Target Start/End: Original strand, 17415028 - 17415169
Alignment:
Q  52 gaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtct 151  Q
    |||||||||||||| |||||||||||| | ||||||||||| | ||  |||||||||||||| |||||||||||| || | ||||||||| |||||||||    
T  17415028 gaacttgaaatgaattttcttcactttttgttgtcttcaaataactcctaagaaccattgat-ttcaatcttcatgtcctcgatccttcacgtgatgtct 17415126  T
Q  152 tgatttttcgattaacatgatttcccactacaaagcactcaaaa 195  Q
    || |||  ||||| ||| |||||| ||||| |||| ||||||||    
T  17415127 tgttttgccgatttacacgatttctcactaaaaag-actcaaaa 17415169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 52 - 195
Target Start/End: Complemental strand, 19541286 - 19541145
Alignment:
Q  52 gaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtct 151  Q
    ||||||||||||||  ||||| ||||||||||||||| || | |||| |||||||||||| ||||||||||||||||| | |||||||||  ||||||||    
T  19541286 gaacttgaaatgaagattcttaactttgtattgtctttaata-ccttataagaaccattggtcttcaatcttcatatcctcgatccttcacttgatgtct 19541188  T
Q  152 tgatttttcgattaacatgatttcccactacaaagcactcaaaa 195  Q
    |  |||  ||||| |||||||||| ||||| |||| ||||||||    
T  19541187 tattttgccgatttacatgatttctcactagaaag-actcaaaa 19541145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 200 - 308
Target Start/End: Complemental strand, 25474077 - 25473968
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaa-gtacttaaaacatagccaaaataacacatgatgtt 298  Q
    |||||||||||| ||||||||||||| ||| |||||||||||||||||||||||  ||| |||| ||||| ||||||||||||||||  || |||||| |    
T  25474077 tgttcctcaaacaattgacaactcctctaactctcatcttatttgtcttcaaatgaaaataaaatgtactaaaaacatagccaaaatgtcatatgatgct 25473978  T
Q  299 ccgtcatcaa 308  Q
    | ||||||||    
T  25473977 ctgtcatcaa 25473968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 67 - 175
Target Start/End: Original strand, 14921918 - 14922026
Alignment:
Q  67 tttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtcttgatttttcgattaa 166  Q
    ||||||||||||||||||||| || | ||||| ||||||||||||| |||||||||||||||| | ||| |||||  |||||| ||| |||| ||||| |    
T  14921918 tttcttcactttgtattgtctacatataccttctaagaaccattgaacttcaatcttcatatcctcgattcttcacatgatgtattgtttttccgattta 14922017  T
Q  167 catgatttc 175  Q
    |||||||||    
T  14922018 catgatttc 14922026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 200 - 307
Target Start/End: Complemental strand, 35707843 - 35707735
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaag-aaaagtacttaaaacatagccaaaataacacatgatgtt 298  Q
    |||| |||||||||||||||||| || ||| ||||||||||||||||||||||| ||||| ||||||||| ||||||||| ||||||  || |||||| |    
T  35707843 tgtttctcaaaccattgacaacttctctaactctcatcttatttgtcttcaaatacaaagaaaaagtactaaaaacatagtcaaaatgtcatatgatgct 35707744  T
Q  299 ccgtcatca 307  Q
    | |||||||    
T  35707743 ctgtcatca 35707735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 195
Target Start/End: Complemental strand, 35708080 - 35707911
Alignment:
Q  25 atcgttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaa-tctt 123  Q
    ||||||||| ||| || |||||| |  ||||||||||| || ||| |||| |||||||||||||||| |||||| |||||| | ||||| ||||| ||||    
T  35708080 atcgttctttcgtctgaaaactcctgagaacttgaaataaattttgttcattttgtattgtcttcaacaaccttctaagaaaccttgatattcaattctt 35707981  T
Q  124 catatctttgatccttcatgtgatgtcttgatttttcgattaacatgatttcccactacaaagcactcaaaa 195  Q
    |  ||| ||||| |||||  |||||||||||||||  |||| |||||||| | ||||||||| |||||||||    
T  35707980 c--atccttgatacttcacatgatgtcttgattttatgatttacatgattcctcactacaaaacactcaaaa 35707911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 77 - 195
Target Start/End: Original strand, 21848963 - 21849080
Alignment:
Q  77 ttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtcttgatttttcgattaacatgatttcc 176  Q
    ||||||||| ||| ||||||||||||||||||||||| |||| | ||  |||| ||||||||||||||||||||||| | || ||||| |||| |||||     
T  21848963 ttgtattgtgttccaaaaccttttaagaaccattgattttcattattattatccttgatccttcatgtgatgtcttgttcttccgatttacattatttct 21849062  T
Q  177 cactacaaagcactcaaaa 195  Q
    ||||| |||| ||||||||    
T  21849063 cactaaaaag-actcaaaa 21849080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 25 - 195
Target Start/End: Complemental strand, 25474314 - 25474145
Alignment:
Q  25 atcgttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttc 124  Q
    ||||||||| | | ||||||||  || |||| ||||||||| |||||||||||| |||||||||||| |||||| |||||||| |||| ||||||| |      
T  25474314 atcgttctttcatctggaaactactaggaacctgaaatgaattttcttcactttatattgtcttcaacaaccttctaagaacccttgaccttcaat-tct 25474216  T
Q  125 atatctttgatccttcatgtgatgtcttgatttttcgattaacatgatttcccactacaaagcactcaaaa 195  Q
    | ||| ||||| |||||  ||||||||||||||   |||| |||||||| | ||||||||| || ||||||    
T  25474215 acatccttgattcttcacatgatgtcttgatttgatgatttacatgattcctcactacaaaacagtcaaaa 25474145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 52 - 129
Target Start/End: Complemental strand, 18818952 - 18818875
Alignment:
Q  52 gaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatc 129  Q
    ||||||||| |||| |||||||||||||||||||||||||| ||||| ||||||||||| ||||||| | ||||||||    
T  18818952 gaacttgaattgaattttcttcactttgtattgtcttcaaagaccttctaagaaccattaatcttcagttttcatatc 18818875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 77 - 153
Target Start/End: Complemental strand, 24047608 - 24047531
Alignment:
Q  77 ttgtattgtcttcaaaaacctttta-agaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtcttg 153  Q
    |||||||||||||| |||||||||  ||||||||||||||||| |||||||||| ||||||||||||| |||||||||    
T  24047608 ttgtattgtcttcacaaacctttttgagaaccattgatcttcattcttcatatccttgatccttcatgggatgtcttg 24047531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 77 - 200
Target Start/End: Complemental strand, 17152379 - 17152256
Alignment:
Q  77 ttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtcttgatttttcgattaacatgatttcc 176  Q
    ||||||| |||||||||||||| ||||||||||| || |||| |||||||||| |||||||||||   ||||||||| |||  ||||| ||||||||||     
T  17152379 ttgtattatcttcaaaaaccttctaagaaccattcatattcattcttcatatccttgatccttcacacgatgtcttgttttgccgatttacatgatttct 17152280  T
Q  177 cactacaaagcactcaaaatactt 200  Q
     |||| |||  |||||||| ||||    
T  17152279 tactaaaaaaaactcaaaacactt 17152256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 199 - 284
Target Start/End: Complemental strand, 32619683 - 32619598
Alignment:
Q  199 ttgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacatagccaaaa 284  Q
    ||||||||| ||||||| ||||||||| ||  |||||  |||||||||||||||| |||||||||||||| |||| ||||||||||    
T  32619683 ttgttcctctaaccattaacaactcctctatctctcaagttatttgtcttcaaatgcaaagaaaagtactaaaaatatagccaaaa 32619598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 82 - 153
Target Start/End: Original strand, 15454433 - 15454504
Alignment:
Q  82 ttgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtcttg 153  Q
    ||||||| | ||| ||||||||||||||| ||||| | |||||||||| |||||||||||||||||||||||    
T  15454433 ttgtctttagaaaacttttaagaaccatttatctttattcttcatatccttgatccttcatgtgatgtcttg 15454504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 200 - 263
Target Start/End: Original strand, 16593827 - 16593890
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaa 263  Q
    ||||| |||||||||||||||||||||||| ||| ||||||||||||||||||| |||| ||||    
T  16593827 tgttcatcaaaccattgacaactcctataactctaatcttatttgtcttcaaatgcaaaaaaaa 16593890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 58 - 153
Target Start/End: Complemental strand, 31262241 - 31262147
Alignment:
Q  58 gaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtcttg 153  Q
    |||||||| ||||||||  || ||||||||||||| ||||  ||||||||||| |||||||||||||||||| | ||| ||||||||| |||||||    
T  31262241 gaaatgaattttcttcaacttatattgtcttcaaagacctactaagaaccattaatcttcaatcttcatatcctcgat-cttcatgtggtgtcttg 31262147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 200 - 261
Target Start/End: Complemental strand, 30998811 - 30998750
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaa 261  Q
    |||||||||||||||||||||||| | ||| ||||||||||||||||||||||  |||||||    
T  30998811 tgttcctcaaaccattgacaactcatctaactctcatcttatttgtcttcaaaggcaaagaa 30998750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 71 - 185
Target Start/End: Complemental strand, 32619856 - 32619747
Alignment:
Q  71 ttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtcttgatttttcgattaacatg 170  Q
    |||||||||||||||||||||||||||| | |||||  ||||| |||| |||||||||| ||||    ||| ||||||||||||||| |||| | |||||    
T  32619856 ttcactttgtattgtcttcaaaaaccttcttagaacttttgat-ttcattcttcatatccttga----tcacgtgatgtcttgatttgtcgaattacatg 32619762  T
Q  171 atttcccactacaaa 185  Q
    ||||| | |||||||    
T  32619761 atttctcgctacaaa 32619747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 284
Target Start/End: Original strand, 28278498 - 28278581
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacatagccaaaa 284  Q
    ||||| |||||||||||| || |||| ||| |||| ||||||||| |||||||| ||||||||||||| ||||||||||| ||||    
T  28278498 tgttcttcaaaccattgagaaatcctctaactctcttcttatttgccttcaaatgcaaagaaaagtac-taaaacatagcaaaaa 28278581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 90 - 185
Target Start/End: Complemental strand, 15829333 - 15829239
Alignment:
Q  90 aaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtcttgatttttcgattaacatgatttcccactacaaa 185  Q
    ||||| ||| || ||||| ||| |||||||| ||||||||  |||||||||| ||||||||||||||| |||||| |||||||||| |||| ||||    
T  15829333 aaaaaacttataggaaccgttggtcttcaat-ttcatatcaatgatccttcacgtgatgtcttgatttgtcgatttacatgatttctcactgcaaa 15829239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 112
Target Start/End: Original strand, 22525685 - 22525744
Alignment:
Q  53 aacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattga 112  Q
    |||||||||| || |||||||||||||| ||||||||||| ||||| |||||||||||||    
T  22525685 aacttgaaataaattttcttcactttgtgttgtcttcaaataccttctaagaaccattga 22525744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 199 - 277
Target Start/End: Complemental strand, 1733141 - 1733063
Alignment:
Q  199 ttgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacata 277  Q
    ||||| |||||  |||||||||||||| ||| |||||||| ||||||||||||||  ||| ||||||||| ||||||||    
T  1733141 ttgtttctcaactcattgacaactcctctaactctcatctcatttgtcttcaaatgaaaaaaaaagtactaaaaacata 1733063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 53 - 127
Target Start/End: Complemental strand, 31274205 - 31274131
Alignment:
Q  53 aacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcata 127  Q
    |||||| |||||| ||||||||  || ||||||||||||| ||||| ||||||||||| ||||||||| ||||||    
T  31274205 aacttggaatgaattttcttcaacttatattgtcttcaaagaccttctaagaaccattaatcttcaattttcata 31274131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 52 - 180
Target Start/End: Original strand, 34063705 - 34063833
Alignment:
Q  52 gaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtct 151  Q
    |||||| ||||||| ||||||||||||||||||||||||||   ||| ||| ||||||  |  || |||||||||||| | |||||||||   |||||||    
T  34063705 gaacttcaaatgaattttcttcactttgtattgtcttcaaatgtcttctaataaccatcaaaattaaatcttcatatcgtcgatccttcacacgatgtct 34063804  T
Q  152 tgatttttcgattaacatgatttcccact 180  Q
    || |||  ||||| |||||| ||| ||||    
T  34063805 tgttttgccgatttacatgaattctcact 34063833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 185
Target Start/End: Complemental strand, 1733365 - 1733209
Alignment:
Q  28 gttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttca-atcttcat 126  Q
    |||||||||| || |||||| || |||  | ||||||| ||| ||||||||||||| ||||||| ||| || |||||||  ||||||||||  |||||      
T  1733365 gttcttccgtctgaaaactcctaggaatctaaaatgaattttattcactttgtattatcttcaacaacattctaagaactcttgatcttcatttcttc-- 1733268  T
Q  127 atctttgatccttcatgtgatgtcttgatttttcgattaacatgatttcccactacaaa 185  Q
    ||| || |||||||| ||||||||||| |||   |||| |||||||| | |||||||||    
T  1733267 atccttaatccttcacgtgatgtcttgctttgatgatttacatgattcctcactacaaa 1733209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 77 - 152
Target Start/End: Complemental strand, 17862635 - 17862560
Alignment:
Q  77 ttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtctt 152  Q
    ||||| ||||||||||||  || |||||||||  ||| |||| |||||||||| |||||| |||||||||||||||    
T  17862635 ttgtactgtcttcaaaaaaattctaagaaccaccgattttcattcttcatatccttgatctttcatgtgatgtctt 17862560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 308
Target Start/End: Original strand, 18236376 - 18236486
Alignment:
Q  199 ttgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacatagc-caaaataacacatgatgt 297  Q
    ||||| |||||||||||||||||| |||||| |  ||  || |||| |||||||| |||||||||  ||| ||||||||||  |||||| || ||||||     
T  18236376 ttgtttctcaaaccattgacaacttctataaattacaatttctttgccttcaaatgcaaagaaaataactaaaaacatagcataaaatatcatatgatgc 18236475  T
Q  298 tccgtcatcaa 308  Q
    |||||||||||    
T  18236476 tccgtcatcaa 18236486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 262
Target Start/End: Original strand, 21844704 - 21844766
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaa 262  Q
    ||||||| |||||||||||||||||| ||| |  || ||||||||||||||||| ||||||||    
T  21844704 tgttcctaaaaccattgacaactcctctaaattacaacttatttgtcttcaaatgcaaagaaa 21844766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 175
Target Start/End: Original strand, 27917916 - 27917970
Alignment:
Q  121 cttcatatctttgatccttcatgtgatgtcttgatttttcgattaacatgatttc 175  Q
    |||||| || |||||||||||| |||||||||||||| |||||| ||||||||||    
T  27917916 cttcatctccttgatccttcatctgatgtcttgatttgtcgattgacatgatttc 27917970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 295
Target Start/End: Original strand, 19949629 - 19949725
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaag-aaaagtacttaaaacatagccaaaataacacatgat 295  Q
    |||||||||||| ||| |||||||||  |  |||||| |||||| ||||||||| ||||| ||||||||| |||||||||  |||||| || |||||    
T  19949629 tgttcctcaaactattaacaactcctcaatctctcatgttatttatcttcaaatacaaagaaaaagtactaaaaacatagaaaaaatatcatatgat 19949725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 307
Target Start/End: Original strand, 32276588 - 32276696
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacatagccaaaa-taacacatgatgtt 298  Q
    ||||| |||||||||||||| ||||| ||| |  | ||||||||  |||||||| |||||||||  ||| |||||||| |||||| || || ||||||||    
T  32276588 tgttcttcaaaccattgacatctcctttaaatgacctcttattttccttcaaatgcaaagaaaataactaaaaacatatccaaaagtaccatatgatgtt 32276687  T
Q  299 ccgtcatca 307  Q
    || ||||||    
T  32276688 ccttcatca 32276696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 237 - 284
Target Start/End: Original strand, 31914045 - 31914092
Alignment:
Q  237 cttatttgtcttcaaatccaaagaaaagtacttaaaacatagccaaaa 284  Q
    ||||||||||||||||| ||||||||| |||| |||||||||| ||||    
T  31914045 cttatttgtcttcaaatgcaaagaaaaatactaaaaacatagcaaaaa 31914092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 262
Target Start/End: Original strand, 21843077 - 21843139
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaa 262  Q
    ||||||| ||||||||| |||||||| ||| |  || ||||||||||||||||| ||||||||    
T  21843077 tgttcctaaaaccattggcaactcctctaaattacaacttatttgtcttcaaatgcaaagaaa 21843139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 238
Target Start/End: Complemental strand, 15829173 - 15829136
Alignment:
Q  201 gttcctcaaaccattgacaactcctataattctcatct 238  Q
    ||||||||||||||||||||||||| ||| ||||||||    
T  15829173 gttcctcaaaccattgacaactcctctaactctcatct 15829136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 129
Target Start/End: Original strand, 17884531 - 17884584
Alignment:
Q  76 tttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatc 129  Q
    ||||||| || |||||||||||| |||||| || ||||||||| ||||||||||    
T  17884531 tttgtatagttttcaaaaaccttctaagaatcaatgatcttcattcttcatatc 17884584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 100
Target Start/End: Original strand, 19949436 - 19949469
Alignment:
Q  67 tttcttcactttgtattgtcttcaaaaacctttt 100  Q
    ||||||||||||||||||||||||| ||||||||    
T  19949436 tttcttcactttgtattgtcttcaataacctttt 19949469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 129
Target Start/End: Complemental strand, 30705427 - 30705374
Alignment:
Q  77 ttgtattgtcttcaaaaacctttt-aagaaccattgatcttcaatcttcatatc 129  Q
    |||||||||||| ||||| ||||| ||||||||| |||||||| ||||||||||    
T  30705427 ttgtattgtcttaaaaaaacttttcaagaaccatcgatcttcattcttcatatc 30705374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 92; Significance: 1e-44; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 28 - 195
Target Start/End: Original strand, 16052117 - 16052284
Alignment:
Q  28 gttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcata 127  Q
    |||||||||| | |||||||  | |||||||||||||| |||||||| ||||||||||||||||||||||| |||||| ||||| |||| ||||||||||    
T  16052117 gttcttccgtctagaaactccaaggaacttgaaatgaattttcttcattttgtattgtcttcaaaaaccttctaagaatcattggtctttaatcttcata 16052216  T
Q  128 tctttgatccttcatgtgatgtcttgatttttcgattaacatgatttcccactacaaagcactcaaaa 195  Q
    || || |||||||||||||||||||||||| | |||| | |||||||| ||||||||| |||||||||    
T  16052217 tcctttatccttcatgtgatgtcttgatttgttgatttagatgatttctcactacaaaacactcaaaa 16052284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 53 - 195
Target Start/End: Complemental strand, 32239537 - 32239395
Alignment:
Q  53 aacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtctt 152  Q
    ||||||||||||| |||||||||||| ||||||||| || |||||| ||| ||||||||| |||||||||||||||| || ||||||||||||||||||     
T  32239537 aacttgaaatgaattttcttcactttttattgtctttaagaaccttataaaaaccattgaacttcaatcttcatatcctttatccttcatgtgatgtctc 32239438  T
Q  153 gatttttcgattaacatgatttcccactacaaagcactcaaaa 195  Q
    ||||| || ||| ||| |||||| ||||||||| |||||||||    
T  32239437 gatttgtcaatttacacgatttctcactacaaaacactcaaaa 32239395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 28 - 185
Target Start/End: Original strand, 28901190 - 28901346
Alignment:
Q  28 gttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcata 127  Q
    |||||||||| | ||||||| || || ||||||||||| |||||||||||||||||||||||| ||||||| |||||||||||||  |||||||||||||    
T  28901190 gttcttccgtctagaaactcctaggagcttgaaatgaattttcttcactttgtattgtcttcagaaaccttataagaaccattga-attcaatcttcata 28901288  T
Q  128 tctttgatccttcatgtgatgtcttgatttttcgattaacatgatttcccactacaaa 185  Q
    || ||||| |||||| |||||||||||||| |||||  |||| ||||  |||||||||    
T  28901289 tcattgattcttcatatgatgtcttgatttgtcgatgtacattatttatcactacaaa 28901346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 25 - 200
Target Start/End: Complemental strand, 28902366 - 28902192
Alignment:
Q  25 atcgttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttc 124  Q
    ||||||||| ||| || |||||| || |||||| ||||||| ||| ||||||||||||||||||||| |||||| |||||||||||| |||| ||| ||     
T  28902366 atcgttctttcgtctgaaaactcctaggaacttaaaatgaattttattcactttgtattgtcttcaataaccttctaagaaccattggtctttaat-tta 28902268  T
Q  125 atatctttgatccttcatgtgatgtcttgatttttcgattaacatgatttcccactacaaagcactcaaaatactt 200  Q
    ||||| ||||||||||| ||||||||| ||||| | |||| |||||||||| |||||| || |||| |||| ||||    
T  28902267 atatcattgatccttcacgtgatgtctcgatttgttgatttacatgatttctcactactaaacactaaaaacactt 28902192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 25 - 157
Target Start/End: Original strand, 11310094 - 11310224
Alignment:
Q  25 atcgttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttc 124  Q
    ||||||||||||| | ||||||| || ||||||||||| || ||||||||||||||||||| |||||||||||| |||||| |||||| ||| |||||||    
T  11310094 atcgttcttccgtctagaaactcctaggaacttgaaat-aattttcttcactttgtattgttttcaaaaaccttctaagaatcattga-cttaaatcttc 11310191  T
Q  125 atatctttgatccttcatgtgatgtcttgattt 157  Q
    ||||| |||||||||||  ||||||||||||||    
T  11310192 atatccttgatccttcacatgatgtcttgattt 11310224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 52 - 198
Target Start/End: Original strand, 22894396 - 22894540
Alignment:
Q  52 gaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtct 151  Q
    |||||| ||| ||| |||||||||||||||||||||||||||||| | ||||||| |||||  ||||||||| ||||| ||||||||||||||||| |||    
T  22894396 gaacttcaaaagaattttcttcactttgtattgtcttcaaaaaccatctaagaacaattga-attcaatctttatatcattgatccttcatgtgatatct 22894494  T
Q  152 tgatttttcgattaacatgatttcccactacaaagcactcaaaatac 198  Q
    ||| ||||||||| |||||||||| ||||| | | |||| |||||||    
T  22894495 tga-ttttcgatttacatgatttctcactatagaacactaaaaatac 22894540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 53 - 175
Target Start/End: Complemental strand, 24696832 - 24696709
Alignment:
Q  53 aacttgaaatgaaatttcttc-actttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtct 151  Q
    ||||||||||||| ||| ||  |||||||||| |||||||||||||| ||||||| | || ||||||||||||||||| ||||||||| |||||||||||    
T  24696832 aacttgaaatgaatttttttttactttgtattttcttcaaaaaccttctaagaacaagtggtcttcaatcttcatatccttgatcctttatgtgatgtct 24696733  T
Q  152 tgatttttcgattaacatgatttc 175  Q
    |||||| | |||| ||||||||||    
T  24696732 tgatttgttgatttacatgatttc 24696709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 68 - 195
Target Start/End: Original strand, 28859119 - 28859246
Alignment:
Q  68 ttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtcttgatttttcgattaac 167  Q
    ||||||||||| ||||||||||||||||| | ||||||||||||||||| |||||| ||||| ||||||||||||||||||| | | ||| || ||| ||    
T  28859119 ttcttcactttttattgtcttcaaaaaccatctaagaaccattgatctttaatcttgatatccttgatccttcatgtgatgtttaggtttgtccatttac 28859218  T
Q  168 atgatttcccactacaaagcactcaaaa 195  Q
    ||||||||  |||||||| | |||||||    
T  28859219 atgatttcttactacaaaaccctcaaaa 28859246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 52 - 173
Target Start/End: Original strand, 28291965 - 28292086
Alignment:
Q  52 gaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtct 151  Q
    |||||||||||  | |||||||| ||||||||||||||||| ||||| ||||||||||| |||||||||||||||||| |  ||||||||||||||||||    
T  28291965 gaacttgaaatttattttcttcattttgtattgtcttcaaagaccttctaagaaccattaatcttcaatcttcatatcctcaatccttcatgtgatgtct 28292064  T
Q  152 tgatttttcgattaacatgatt 173  Q
    |  |||  ||||| ||||||||    
T  28292065 tattttggcgatttacatgatt 28292086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 25 - 195
Target Start/End: Complemental strand, 16054571 - 16054402
Alignment:
Q  25 atcgttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttc 124  Q
    |||||||||  || ||||||||| || |||||||||||||| ||||||||||||||||| ||||||| |||||| |||||||| ||||||||||||  ||    
T  16054571 atcgttcttttgtctggaaactcctaggaacttgaaatgaattttcttcactttgtattttcttcaacaaccttctaagaacccttgatcttcaat--tc 16054474  T
Q  125 at-atctttgatccttcatgtgatgtcttgatttttcgattaacatgatttcccactacaaagcactcaaaa 195  Q
    || | | |||||||||||  ||||||||||| ||   |||| |||||||| | ||||||||| || ||||||    
T  16054473 atcaaccttgatccttcacatgatgtcttgaattaatgatttacatgattcctcactacaaaacaatcaaaa 16054402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 56 - 200
Target Start/End: Complemental strand, 29292016 - 29291873
Alignment:
Q  56 ttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtcttgat 155  Q
    |||||||||| ||| |||||||| | ||||||||||| ||||| ||||||||||||||||||||| |||||||| | ||| ||||| ||||| ||||| |    
T  29292016 ttgaaatgaatttttttcactttctgttgtcttcaaagaccttctaagaaccattgatcttcaatattcatatcctcgattcttcacgtgatatcttgtt 29291917  T
Q  156 ttttcgattaacatgatttcccactacaaagcactcaaaatactt 200  Q
    ||  ||||| ||||||||||  |||| |||| |||||||||||||    
T  29291916 ttgccgatttacatgatttcttactaaaaag-actcaaaatactt 29291873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 52 - 175
Target Start/End: Complemental strand, 30544012 - 30543888
Alignment:
Q  52 gaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaa-gaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtc 150  Q
    |||||||||||||| |||||||||||| ||||||||| ||| | ||||||| |||||||||| |||||||||||||||| |  |||||||||||||| ||    
T  30544012 gaacttgaaatgaattttcttcactttatattgtctttaaatatcttttaaagaaccattgaacttcaatcttcatatcctcaatccttcatgtgatatc 30543913  T
Q  151 ttgatttttcgattaacatgatttc 175  Q
    ||| |||  ||||| ||||||||||    
T  30543912 ttgttttaccgatttacatgatttc 30543888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 202 - 296
Target Start/End: Complemental strand, 12956527 - 12956432
Alignment:
Q  202 ttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacatag-ccaaaataacacatgatg 296  Q
    |||||||||||||||||||||||| ||| ||||||||||||| ||||||||| |||||||||||||| ||||||||| | |||||| |||||||||    
T  12956527 ttcctcaaaccattgacaactcctctaactctcatcttatttatcttcaaatgcaaagaaaagtactaaaaacatagacaaaaatatcacatgatg 12956432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 71 - 186
Target Start/End: Original strand, 13583403 - 13583518
Alignment:
Q  71 ttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtcttgatttttcgattaacatg 170  Q
    |||||||||||||||||||||| | ||| ||||||||||||| |||||||| ||||||| | |||||||||  |||||||||| ||| |||||| |||||    
T  13583403 ttcactttgtattgtcttcaaatatcttctaagaaccattgaacttcaatcatcatatcctcgatccttcacttgatgtcttgttttgtcgatttacatg 13583502  T
Q  171 atttcccactacaaag 186  Q
    ||||| ||||| ||||    
T  13583503 atttctcactaaaaag 13583518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 52 - 198
Target Start/End: Complemental strand, 11437670 - 11437524
Alignment:
Q  52 gaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatcc-ttcatgtgatgtc 150  Q
    |||||| ||||||| | |||||||| |||||||||||||||   ||| ||||||||||||| ||||||| |||||||| ||||||| ||||  |||||||    
T  11437670 gaacttcaaatgaattatcttcactctgtattgtcttcaaatgtcttctaagaaccattgaacttcaattttcatatccttgatcctttcacttgatgtc 11437571  T
Q  151 ttgatttttcgattaacatgatttcccactacaaagcactcaaaatac 198  Q
    ||| |||  ||||| |||||||||| ||||| |||| |||||||||||    
T  11437570 ttgttttgccgatttacatgatttctcactaaaaag-actcaaaatac 11437524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 52 - 173
Target Start/End: Complemental strand, 12956732 - 12956610
Alignment:
Q  52 gaacttgaaatgaaatt-tcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtc 150  Q
    |||||||||||||| || ||||||||||||||| |||| |||||||||  || ||| ||||||||||| |||||||||| ||||| ||||||||||| ||    
T  12956732 gaacttgaaatgaatttctcttcactttgtattatcttaaaaaaccttccaaaaacaattgatcttcagtcttcatatccttgattcttcatgtgatatc 12956633  T
Q  151 ttgatttttcgattaacatgatt 173  Q
    ||| ||| |||||| | ||||||    
T  12956632 ttggtttatcgatttatatgatt 12956610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 185
Target Start/End: Original strand, 14976952 - 14977108
Alignment:
Q  28 gttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcata 127  Q
    |||||||||| ||||||||  ||  | |||||||| || |||| |||||||||||| |||||||||||||   || || ||||||| ||||||||||||     
T  14976952 gttcttccgtctggaaacttctagaagcttgaaattaattttcatcactttgtattatcttcaaaaacct---aaaaatcattgattttcaatcttcatg 14977048  T
Q  128 tctttgatccttcatgtgatgtcttgatttttcgattaacatga--tttcccactacaaa 185  Q
    || |||||| |||||||||||||||||||| || ||| ||||||  | ||||||||||||    
T  14977049 tccttgatctttcatgtgatgtcttgatttgtcaatttacatgacttctcccactacaaa 14977108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 200 - 278
Target Start/End: Original strand, 14977182 - 14977260
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacatag 278  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||| |||| ||||||||||| || |||||||||    
T  14977182 tgttcctcaaaccattgacaactcctctaactctcatcttatttgtcttaaaatgcaaagaaaagtgctaaaaacatag 14977260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 206 - 307
Target Start/End: Original strand, 16052358 - 16052460
Alignment:
Q  206 tcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacatagcc-aaaataacacatgatgttccgtca 304  Q
    |||||||||||||||||||| ||| |||||| ||||||||| |||||| |||| ||||||||| ||||||||||| |||||| || |||||| |||||||    
T  16052358 tcaaaccattgacaactcctctaactctcattttatttgtcctcaaatgcaaataaaagtactaaaaacatagccaaaaatatcatatgatgctccgtca 16052457  T
Q  305 tca 307  Q
    |||    
T  16052458 tca 16052460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 202 - 284
Target Start/End: Complemental strand, 24120269 - 24120187
Alignment:
Q  202 ttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacatagccaaaa 284  Q
    ||||||||||| |||||||||||| ||| ||||||||||||| ||||||||| |||||||||||||| |||||||||| ||||    
T  24120269 ttcctcaaaccgttgacaactcctctaactctcatcttatttctcttcaaatgcaaagaaaagtactaaaaacatagcaaaaa 24120187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 52 - 141
Target Start/End: Original strand, 30850964 - 30851053
Alignment:
Q  52 gaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttca 141  Q
    ||||||||||| || ||||||||||||||||| | |||||| || || |||||||| ||||||||||||||||||||| |||||||||||    
T  30850964 gaacttgaaattaattttcttcactttgtattatattcaaagacattctaagaaccgttgatcttcaatcttcatatccttgatccttca 30851053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 41 - 141
Target Start/End: Original strand, 13081788 - 13081887
Alignment:
Q  41 gaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttc 140  Q
    ||||||||||  ||||||||||||| |||||||| |||||||||||||||| |||||| |||||||| |||||||||||| |   |||||||||||||||    
T  13081788 gaaactcatagaaacttgaaatgaattttcttcattttgtattgtcttcaacaaccttctaagaacccttgatcttcaat-tatttatctttgatccttc 13081886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 173
Target Start/End: Complemental strand, 24120501 - 24120353
Alignment:
Q  25 atcgttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttc 124  Q
    ||||||||||||| |||||| || || |||||||||||||| ||||||||  || |||| ||||| |||||||| |||||| ||||| | |||||  ||     
T  24120501 atcgttcttccgtctggaaattcctaggaacttgaaatgaattttcttcatcttttattatcttcgaaaaccttctaagaaacattggtattcaaaatta 24120402  T
Q  125 atatctttgatccttcatgtgatgtcttgatttttcgattaacatgatt 173  Q
    ||||| |||||||||||  |||||||||||||  ||||||  |||||||    
T  24120401 atatccttgatccttcacatgatgtcttgattggtcgatttgcatgatt 24120353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 54 - 181
Target Start/End: Original strand, 6888059 - 6888186
Alignment:
Q  54 acttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtcttg 153  Q
    |||||||| | | ||||||||  |||||||||||||||| || ||||||||||||||||||||||||||||||||| | ||| || || ||||||  |||    
T  6888059 acttgaaacggattttcttcaacttgtattgtcttcaaagacattttaagaaccattgatcttcaatcttcatatcctcgatactgcacgtgatggtttg 6888158  T
Q  154 atttttcgattaacatgatttcccacta 181  Q
     ||| | |||| |||||||||| |||||    
T  6888159 ttttgttgatttacatgatttctcacta 6888186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 59 - 181
Target Start/End: Original strand, 14424684 - 14424806
Alignment:
Q  59 aaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtcttgatttt 158  Q
    ||||||| ||||||||| ||| ||||| |||||||||||| ||||||||||||||||||||||||| |||| |  |||||||   || ||||||| |||     
T  14424684 aaatgaattttcttcacattgaattgtgttcaaaaaccttctaagaaccattgatcttcaatcttcttatcatatatccttcccttgttgtcttgttttg 14424783  T
Q  159 tcgattaacatgatttcccacta 181  Q
     ||||| |||||||||| |||||    
T  14424784 ccgatttacatgatttctcacta 14424806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 200 - 307
Target Start/End: Original strand, 13082012 - 13082120
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaag-aaaagtacttaaaacatagccaaaataacacatgatgtt 298  Q
    |||| |||||| |||||||||||||| ||| ||||||||||||||||||||||| ||||| ||||||||| ||||||||  ||||||  || ||||||||    
T  13082012 tgtttctcaaatcattgacaactcctctaactctcatcttatttgtcttcaaatgcaaagaaaaagtactaaaaacataatcaaaatgtcatatgatgtt 13082111  T
Q  299 ccgtcatca 307  Q
      |||||||    
T  13082112 ttgtcatca 13082120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 200 - 307
Target Start/End: Complemental strand, 16054334 - 16054226
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaag-aaaagtacttaaaacatagccaaaataacacatgatgtt 298  Q
    ||||||| ||| |||||||||||||| ||| ||| ||||||||||||||||||| ||||| ||||||||| || |||||||||||||  || |||||| |    
T  16054334 tgttccttaaatcattgacaactcctctaactcttatcttatttgtcttcaaatgcaaagaaaaagtactaaagacatagccaaaatgtcatatgatgct 16054235  T
Q  299 ccgtcatca 307  Q
    | |||||||    
T  16054234 ctgtcatca 16054226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 200 - 284
Target Start/End: Original strand, 28901415 - 28901499
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacatagccaaaa 284  Q
    |||||||||||||||||||||||||| ||  ||||| ||||||||| ||||||| |||||||||||| | ||| |||||||||||    
T  28901415 tgttcctcaaaccattgacaactcctctatctctcaacttatttgtattcaaatgcaaagaaaagtattaaaagcatagccaaaa 28901499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 52 - 175
Target Start/End: Complemental strand, 5154008 - 5153885
Alignment:
Q  52 gaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtct 151  Q
    |||||||||||||| ||| ||||  || |||||||||||||||||||  || || ||||||||||||||||||||||| | |||||||||  | ||||||    
T  5154008 gaacttgaaatgaattttattcatgttatattgtcttcaaaaaccttccaataatcattgatcttcaatcttcatatcctcgatccttcactttatgtct 5153909  T
Q  152 tgatttttcgattaacatgatttc 175  Q
    || |||  | ||| ||||||||||    
T  5153908 tgttttgcctatttacatgatttc 5153885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 129
Target Start/End: Original strand, 5569981 - 5570081
Alignment:
Q  29 ttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatat 128  Q
    ||||||||| || |||||| || ||| |||||||||| ||||||||  |||||||||||| ||||| ||| |||||||||||| |||| || ||||||||    
T  5569981 ttcttccgtctgaaaactcctatgaagttgaaatgaattttcttcatcttgtattgtctttaaaaagcttctaagaaccattggtctttaaacttcatat 5570080  T
Q  129 c 129  Q
    |    
T  5570081 c 5570081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 284
Target Start/End: Complemental strand, 32239327 - 32239243
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacatagccaaaa 284  Q
    |||| ||||||||||||||||||||| ||||| | ||||||| | |||||||||  |||||||||| || |||||||||||||||    
T  32239327 tgttactcaaaccattgacaactcctctaattattatcttatctatcttcaaatgtaaagaaaagtgctaaaaacatagccaaaa 32239243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 52 - 181
Target Start/End: Original strand, 27097666 - 27097793
Alignment:
Q  52 gaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtct 151  Q
    ||||||||| |||| ||||||||  |||||||||||||||| ||||| ||||||| ||| |  ||||||||||||||  |  |||| ||| |||||||||    
T  27097666 gaacttgaattgaattttcttcaacttgtattgtcttcaaagaccttctaagaactattca--ttcaatcttcatatgatcaatccatcacgtgatgtct 27097763  T
Q  152 tgatttttcgattaacatgatttcccacta 181  Q
    || |||  ||||| |||||||||| |||||    
T  27097764 tgttttgccgatttacatgatttctcacta 27097793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 210 - 307
Target Start/End: Original strand, 29047401 - 29047499
Alignment:
Q  210 accattgacaactcctataattctcatcttatttgtcttcaaatccaaag-aaaagtacttaaaacatagccaaaataacacatgatgttccgtcatca 307  Q
    |||||||||||||||| ||| ||||||||||||||| ||||||| ||||| ||||||||| | || ||||||||| || || |||||| || |||||||    
T  29047401 accattgacaactcctctaactctcatcttatttgttttcaaatgcaaagaaaaagtactaataatatagccaaattatcatatgatgctctgtcatca 29047499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 52 - 129
Target Start/End: Complemental strand, 31436719 - 31436646
Alignment:
Q  52 gaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatc 129  Q
    ||||||||||| || ||| |||||||||||||||||||||| ||||   |||||||||||||| ||||||||||||||    
T  31436719 gaacttgaaat-aatttttttcactttgtattgtcttcaaatacct---aagaaccattgatcgtcaatcttcatatc 31436646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 280
Target Start/End: Complemental strand, 6358731 - 6358658
Alignment:
Q  207 caaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacatagcc 280  Q
    ||||||||| ||||||||| ||  ||||| ||||| ||||||||||| |||| ||||||||| |||||||||||    
T  6358731 caaaccattaacaactcctctatctctcaacttatatgtcttcaaatgcaaataaaagtactaaaaacatagcc 6358658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 77 - 186
Target Start/End: Complemental strand, 28074738 - 28074629
Alignment:
Q  77 ttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtcttgatttttcgattaacatgatttcc 176  Q
    ||||||| ||||  |||||||  |||| |||| ||||||||| |||||||||| |||||||||||| |||||||||| |||    ||| ||||||||||     
T  28074738 ttgtattatctttcaaaacctcgtaaggaccactgatcttcattcttcatatccttgatccttcatttgatgtcttgttttgcatatttacatgatttct 28074639  T
Q  177 cactacaaag 186  Q
    ||||| ||||    
T  28074638 cactaaaaag 28074629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 77 - 195
Target Start/End: Original strand, 28260178 - 28260296
Alignment:
Q  77 ttgtattgtcttcaaaaaccttttaagaaccattgatcttcaat-cttcatatctttgatccttcatgtgatgtcttgatttttcgattaacatgatttc 175  Q
    ||||||| ||||||||||| || ||||||| |||||||||||||  || ||||  |||||||| || ||||||||||| |||   |||| ||||||||||    
T  28260178 ttgtattatcttcaaaaactttataagaactattgatcttcaatatttgatatacttgatcctccacgtgatgtcttgttttgctgatttacatgatttc 28260277  T
Q  176 ccactacaaagcactcaaaa 195  Q
     ||||| |||| ||||||||    
T  28260278 tcactaaaaag-actcaaaa 28260296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 113 - 198
Target Start/End: Original strand, 24584650 - 24584734
Alignment:
Q  113 tcttcaatcttcatatctttgatccttcatgtgatgtcttgatttttcgattaacatgatttcccactacaaagcactcaaaatac 198  Q
    |||||||| ||||||||  ||||| ||||||||||||||||| || || ||| ||| |||||| |||||||||  |||||||||||    
T  24584650 tcttcaattttcatatccatgatctttcatgtgatgtcttga-ttgtcaatttacaagatttctcactacaaaaaactcaaaatac 24584734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 282
Target Start/End: Complemental strand, 26882445 - 26882365
Alignment:
Q  203 tcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaag-aaaagtacttaaaacatagccaa 282  Q
    |||| ||||||||| |||||||| ||| |||||| |||||||||||| | | | ||| ||||||||| |||||||||||||    
T  26882445 tccttaaaccattggcaactcctttaaatctcattttatttgtcttcgattgcgaagaaaaagtactaaaaacatagccaa 26882365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 263
Target Start/End: Original strand, 5570216 - 5570279
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaa 263  Q
    |||||||||||  |||||||||||||  || ||||||||||||| ||||||||| |||| ||||    
T  5570216 tgttcctcaaagtattgacaactccttcaaatctcatcttatttttcttcaaatgcaaaaaaaa 5570279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 77 - 175
Target Start/End: Original strand, 35135310 - 35135408
Alignment:
Q  77 ttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtcttgatttttcgattaacatgatttc 175  Q
    ||||| |||||||||||||||  ||| |||||||||| |||| ||| |||| | |  ||||| || ||||||||||| ||| |||||| || |||||||    
T  35135310 ttgtactgtcttcaaaaacctcctaataaccattgattttcattctccataccctcaatcctccacgtgatgtcttgttttgtcgatttacctgatttc 35135408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 175
Target Start/End: Original strand, 12774737 - 12774830
Alignment:
Q  80 tattgtcttcaaaaaccttttaagaaccattgatcttcaatcttca-tatctttgatccttcatgtgatgtcttgatttttcgattaacatgatttc 175  Q
    ||||||||||||| |  |||||||| |||||||||||||||||| | ||||||||||| | || |||||| |||| |||| ||||| |||| |||||    
T  12774737 tattgtcttcaaata--ttttaaga-ccattgatcttcaatcttgattatctttgatcttccacgtgatgacttgtttttccgatttacattatttc 12774830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 114
Target Start/End: Original strand, 29047178 - 29047267
Alignment:
Q  25 atcgttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatc 114  Q
    |||||||||  | ||||||||||||| ||||||  | ||   |||||||| |||| |||||||||||||||||| |||||| | ||||||    
T  29047178 atcgttcttttgcttggaaactcataggaacttagattggtttttcttcattttgcattgtcttcaaaaaccttataagaatccttgatc 29047267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 280
Target Start/End: Original strand, 13530180 - 13530260
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacatagcc 280  Q
    ||||||||||||||| |||| ||||| ||| |  | |||||||||||||||| | ||||||| |  ||| |||||||||||    
T  13530180 tgttcctcaaaccatcgacatctcctctaaatgacctcttatttgtcttcaattgcaaagaatataactaaaaacatagcc 13530260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 280
Target Start/End: Original strand, 13619719 - 13619799
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacatagcc 280  Q
    ||||||||||||||| |||| ||||| ||| |  | |||||||||||||||| | ||||||| |  ||| |||||||||||    
T  13619719 tgttcctcaaaccatcgacatctcctctaaatgacctcttatttgtcttcaattgcaaagaatataactaaaaacatagcc 13619799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 195
Target Start/End: Original strand, 29047262 - 29047326
Alignment:
Q  131 ttgatccttcatgtgatgtcttgatttttcgattaacatgatttcccactacaaagcactcaaaa 195  Q
    |||||||||||  ||||||||||| |||  |||| |||||||| | ||||||||| |||||||||    
T  29047262 ttgatccttcacatgatgtcttgaatttatgatttacatgattcctcactacaaaacactcaaaa 29047326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 92; Significance: 1e-44; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 52 - 195
Target Start/End: Original strand, 34864160 - 34864302
Alignment:
Q  52 gaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtct 151  Q
    |||||| ||||||| |||||||| |||||||||||| |||||||||| ||||||||||||| ||||||||| |||||||||||||||||| |||||||||    
T  34864160 gaactttaaatgaattttcttcattttgtattgtctacaaaaaccttctaagaaccattga-cttcaatctccatatctttgatccttcacgtgatgtct 34864258  T
Q  152 tgatttttcgattaacatgatttcccactacaaagcactcaaaa 195  Q
    |||||| |||||| |||||||||| ||||||||| |||||||||    
T  34864259 tgatttgtcgatttacatgatttctcactacaaaacactcaaaa 34864302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 25 - 195
Target Start/End: Complemental strand, 15192480 - 15192311
Alignment:
Q  25 atcgttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttc 124  Q
    ||||||||||||| |  |||||| || |||||||||||||| | ||||||||||| ||||||||||| |||||| |||||||||||| |||||||| |||    
T  15192480 atcgttcttccgtctaaaaactcctaggaacttgaaatgaattgtcttcactttgaattgtcttcaacaaccttctaagaaccattggtcttcaat-ttc 15192382  T
Q  125 atatctttgatccttcatgtgatgtcttgatttttcgattaacatgatttcccactacaaagcactcaaaa 195  Q
    ||||| ||||||||||| ||||||||||| ||| |||||| |||||||||| ||||||||| |||||||||    
T  15192381 atatccttgatccttcacgtgatgtcttggtttgtcgatttacatgatttctcactacaaaacactcaaaa 15192311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 25 - 185
Target Start/End: Original strand, 47024603 - 47024762
Alignment:
Q  25 atcgttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttc 124  Q
    ||||||||||| | || |||||| || ||||||||||| || | ||||||||||||| ||| |||||||||||| ||||||||||||| |||||||||||    
T  47024603 atcgttcttccatctgaaaactcctaggaacttgaaataaattctcttcactttgtactgttttcaaaaaccttctaagaaccattga-cttcaatcttc 47024701  T
Q  125 atatctttgatccttcatgtgatgtcttgatttttcgattaacatgatttcccactacaaa 185  Q
    || || ||||||||||||| |||||||||||||||||||| |||||||||| |||||||||    
T  47024702 atgtccttgatccttcatgcgatgtcttgatttttcgatttacatgatttctcactacaaa 47024762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 25 - 185
Target Start/End: Complemental strand, 18898259 - 18898100
Alignment:
Q  25 atcgttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttc 124  Q
    ||||||||| ||| || ||| || || |||||||||||||| |||||| |||||||||||| |||||||||||||||||||||| ||| ||||||||| |    
T  18898259 atcgttcttacgtctgaaaaatcctaggaacttgaaatgaattttctttactttgtattgtattcaaaaaccttttaagaaccactga-cttcaatctgc 18898161  T
Q  125 atatctttgatccttcatgtgatgtcttgatttttcgattaacatgatttcccactacaaa 185  Q
    ||| | | ||||||||||||||||||||||||| |||||| |||||||||| |||||||||    
T  18898160 ataccctggatccttcatgtgatgtcttgatttgtcgatttacatgatttctcactacaaa 18898100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 28 - 195
Target Start/End: Original strand, 17026537 - 17026703
Alignment:
Q  28 gttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcata 127  Q
    |||||||||| ||||||||| || ||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||| | ||| |||  |||||    
T  17026537 gttcttccgtctggaaactcctaggaacttgaaattaattttcttcactttgtattgtcttcaaaaactttttaagaaccatt-aacttaaattctcata 17026635  T
Q  128 tctttgatccttcatgtgatgtcttgatttttcgattaacatgatttcccactacaaagcactcaaaa 195  Q
    |  |||||||||||||||||||||| |||| |||||| |||||||||   |||||||| |||||||||    
T  17026636 tacttgatccttcatgtgatgtcttaatttgtcgatttacatgatttatgactacaaaacactcaaaa 17026703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 25 - 195
Target Start/End: Original strand, 25315069 - 25315238
Alignment:
Q  25 atcgttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttc 124  Q
    ||||||||||||| ||||||||| || |||||||||||||| || ||| |  ||||||||||||||| ||| |||||||||||||| ||||| ||| |||    
T  25315069 atcgttcttccgtatggaaactcttaggaacttgaaatgaatttactttatcttgtattgtcttcaacaacattttaagaaccatttatctttaat-ttc 25315167  T
Q  125 atatctttgatccttcatgtgatgtcttgatttttcgattaacatgatttcccactacaaagcactcaaaa 195  Q
    ||||| ||||||||||||| ||||||||||||| |||||| |||||||| | |||||||||  ||||||||    
T  25315168 atatccttgatccttcatgcgatgtcttgatttgtcgatttacatgattcctcactacaaattactcaaaa 25315238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 29 - 195
Target Start/End: Original strand, 12111169 - 12111332
Alignment:
Q  29 ttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatat 128  Q
    |||||| ||||| |||||| ||  ||||||||||||| ||||||||||||||||| |||| ||||||||| ||||||||||||| ||||||| |||||||    
T  12111169 ttcttctgtttgaaaactcctagaaacttgaaatgaattttcttcactttgtattatcttaaaaaaccttataagaaccattga-cttcaatattcatat 12111267  T
Q  129 ctttgatccttcatgtgatgtcttgatttttcgattaacatgatttcccactacaaagcactcaaaa 195  Q
    | ||||||||||| |||||| |||||||| |||||| ||| || ||| ||||||||| |||||||||    
T  12111268 c-ttgatccttcacgtgatgacttgatttgtcgatttacaaga-ttctcactacaaaacactcaaaa 12111332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 25 - 149
Target Start/End: Complemental strand, 51884879 - 51884756
Alignment:
Q  25 atcgttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttc 124  Q
    ||||||||||||| || ||||||||| ||||||||||| || ||||||||||||||||||| ||||| || ||| ||||| || |||||||||||| |||    
T  51884879 atcgttcttccgtctgaaaactcataggaacttgaaattaattttcttcactttgtattgtattcaacaatcttctaagagcccttgatcttcaat-ttc 51884781  T
Q  125 atatctttgatccttcatgtgatgt 149  Q
    |||||||||||||||||||||||||    
T  51884780 atatctttgatccttcatgtgatgt 51884756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 52 - 198
Target Start/End: Complemental strand, 19602048 - 19601903
Alignment:
Q  52 gaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtct 151  Q
    |||| ||||||||| ||||| |||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||| | |||| |||| |||||||||    
T  19602048 gaacatgaaatgaattttctccactttttattgtcttcaaaaaccttttaagaaccattg-tcttcaatcatcatatcctcgatctttcacgtgatgtct 19601950  T
Q  152 tgatttttcgattaacatgatttcccactacaaagcactcaaaatac 198  Q
    |||||| | |||| |||||||||| ||||| ||| | || |||||||    
T  19601949 tgatttgttgatttacatgatttctcactagaaaacgctaaaaatac 19601903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 52 - 195
Target Start/End: Original strand, 31859765 - 31859907
Alignment:
Q  52 gaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtct 151  Q
    ||||||||||| || |||||||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||| | |||||||||  || |||||    
T  31859765 gaacttgaaataaattttcttcactttgtattgtcttcaaataccttctaagaaccattgatcttcaatattcatatcctcgatccttcacctggtgtct 31859864  T
Q  152 tgatttttcgattaacatgatttcccactacaaagcactcaaaa 195  Q
    || |||   |||| |||||||||| ||||| |||| ||||||||    
T  31859865 tgttttgctgatttacatgatttctcactaaaaag-actcaaaa 31859907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 28 - 173
Target Start/End: Complemental strand, 5676474 - 5676329
Alignment:
Q  28 gttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcata 127  Q
    |||||||||| | ||||||| ||  |||| |||||||| ||||||||  |||||||||||||||||||||| |||||| ||||  | ||||| ||| |||    
T  5676474 gttcttccgtctagaaactcctagtaactcgaaatgaattttcttcatcttgtattgtcttcaaaaaccttctaagaatcatttgtattcaaacttaata 5676375  T
Q  128 tctttgatccttcatgtgatgtcttgatttttcgattaacatgatt 173  Q
    || ||||||||||||||||||||||||||| || ||| ||||||||    
T  5676374 tccttgatccttcatgtgatgtcttgatttatcaatttacatgatt 5676329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 25 - 173
Target Start/End: Complemental strand, 27303054 - 27302907
Alignment:
Q  25 atcgttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttc 124  Q
    ||||||||||||| || |||||| || |||||| ||||||| |||||||||||| || |||||||||||||||| |||||||| || || |||||| |||    
T  27303054 atcgttcttccgtctgaaaactcctaggaacttaaaatgaattttcttcactttataatgtcttcaaaaaccttctaagaacccttaatgttcaat-ttc 27302956  T
Q  125 atatctttgatccttcatgtgatgtcttgatttttcgattaacatgatt 173  Q
    ||||| |||||| | || |||||||||| |||| |||||| ||||||||    
T  27302955 atatccttgatcttgcacgtgatgtcttaatttgtcgatttacatgatt 27302907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 52 - 175
Target Start/End: Complemental strand, 13064676 - 13064553
Alignment:
Q  52 gaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtct 151  Q
    ||||||||||| |||||| ||||||||| |||||||||||| ||| | ||||||||||||| |||||||| || |||| ||||||||||| |||||||||    
T  13064676 gaacttgaaatcaaatttgttcactttgaattgtcttcaaataccctctaagaaccattgaacttcaatcgtcttatccttgatccttcacgtgatgtct 13064577  T
Q  152 tgatttttcgattaacatgatttc 175  Q
    ||||||  | ||| ||||||||||    
T  13064576 tgatttgccaatttacatgatttc 13064553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 25 - 159
Target Start/End: Original strand, 1695684 - 1695817
Alignment:
Q  25 atcgttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttc 124  Q
    ||||||||| |||||| |||||| || |||||||||||||| ||| ||||||||||||||||||||| |||||| ||||||   || || ||||||||||    
T  1695684 atcgttctttcgtttgtaaactcctaggaacttgaaatgaattttattcactttgtattgtcttcaacaaccttctaagaatgttttat-ttcaatcttc 1695782  T
Q  125 atatctttgatccttcatgtgatgtcttgattttt 159  Q
    ||||| |||||| ||||  ||||||||||||||||    
T  1695783 atatcgttgatcattcacatgatgtcttgattttt 1695817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 25 - 174
Target Start/End: Original strand, 5906600 - 5906749
Alignment:
Q  25 atcgttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttc 124  Q
    |||||||||| || |||||| |  || ||| |||||||||| |||||| |||||||||| |||||||||||||| ||||||||||| ||||| ||||||     
T  5906600 atcgttcttctgtctggaaatttttatgaatttgaaatgaattttcttaactttgtattatcttcaaaaaccttctaagaaccattaatcttaaatctta 5906699  T
Q  125 atatctttgatccttcatgtgatgtcttgatttttcgattaacatgattt 174  Q
    ||||  | ||||||||||||||| ||||| ||| ||| || |||||||||    
T  5906700 atattctagatccttcatgtgatatcttggtttgtcggtttacatgattt 5906749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 52 - 195
Target Start/End: Complemental strand, 23353868 - 23353730
Alignment:
Q  52 gaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtct 151  Q
    |||||||||||||| |||||||||||||||||||||| ||| ||||| |   ||| ||||||||| |||||||||||| ||| |||||||||||||||||    
T  23353868 gaacttgaaatgaattttcttcactttgtattgtcttaaaagaccttct---aactattgatctttaatcttcatatccttg-tccttcatgtgatgtct 23353773  T
Q  152 tgatttttcgattaacatgatttcccactacaaagcactcaaaa 195  Q
    || |||  ||||| |||||||||| ||||| |||| ||||||||    
T  23353772 tgttttgccgatttacatgatttctcactaaaaag-actcaaaa 23353730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 52 - 153
Target Start/End: Original strand, 7024083 - 7024184
Alignment:
Q  52 gaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtct 151  Q
    |||||| | ||||| ||||||||  ||||||| ||||||| || ||| |||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  7024083 gaactttatatgaattttcttcatcttgtattatcttcaagaatcttctaagaaccattggtcttcaatcttcatatctttgatccttcacgtgatgtct 7024182  T
Q  152 tg 153  Q
    ||    
T  7024183 tg 7024184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 25 - 185
Target Start/End: Original strand, 10320058 - 10320216
Alignment:
Q  25 atcgttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttc 124  Q
    |||||||| || | ||||||||| || ||||||||||| || ||||||||||||||||||| ||| || ||||| ||| ||||||| | ||||||| |||    
T  10320058 atcgttctaccttctggaaactcctaggaacttgaaataaattttcttcactttgtattgttttcgaagaccttctaacaaccatt-aacttcaattttc 10320156  T
Q  125 atatctttgatccttcatgtgatgtcttgatttttcgattaacatgatttcccactacaaa 185  Q
    | ||| |||||||||||||| ||||| |||||| || ||| || ||||||| |||||||||    
T  10320157 acatccttgatccttcatgttatgtc-tgatttgtcaatttacctgatttctcactacaaa 10320216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 56 - 195
Target Start/End: Complemental strand, 33519276 - 33519138
Alignment:
Q  56 ttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtcttgat 155  Q
    |||||||||| ||||||||  |||||||||||||||| ||||| ||||||| |||||||||||||| ||||||| |  || ||||| | ||||| |||||    
T  33519276 ttgaaatgaattttcttcaacttgtattgtcttcaaagaccttctaagaacgattgatcttcaatcgtcatatcctcaattcttcaagagatgttttgat 33519177  T
Q  156 ttttcgattaacatgatttcccactacaaagcactcaaaa 195  Q
    ||  ||||| |||||||||| ||||| |||| ||||||||    
T  33519176 ttgccgattcacatgatttctcactaaaaag-actcaaaa 33519138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 200 - 286
Target Start/End: Original strand, 5906795 - 5906881
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacatagccaaaata 286  Q
    ||||||||||||||||||||| |||| ||| ||||||||| ||||||||||||| |||| ||||||||| |||||||||| ||||||    
T  5906795 tgttcctcaaaccattgacaattcctctaactctcatcttgtttgtcttcaaatgcaaataaaagtactaaaaacatagcaaaaata 5906881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 201 - 277
Target Start/End: Original strand, 34864367 - 34864443
Alignment:
Q  201 gttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacata 277  Q
    ||||||||||||||||||||||||| ||| | | ||||||||||||||||||| |||||||||||||| ||||||||    
T  34864367 gttcctcaaaccattgacaactcctctaacttttatcttatttgtcttcaaatacaaagaaaagtactaaaaacata 34864443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 77 - 153
Target Start/End: Complemental strand, 46647420 - 46647344
Alignment:
Q  77 ttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtcttg 153  Q
    ||||||| |||| ||||||||||||||||||||||||||||| | |||||||||||||||| ||| |||||||||||    
T  46647420 ttgtattatctttaaaaaccttttaagaaccattgatcttcatttttcatatctttgatccctcacgtgatgtcttg 46647344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 52 - 191
Target Start/End: Original strand, 9782849 - 9782986
Alignment:
Q  52 gaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaat-cttcatatctttgatccttcatgtgatgtc 150  Q
    |||||||||||||| ||||||||||||| ||| | || || |||||| |||||||| |||||||||||| ||||||  |||||||||| ||  |||||||    
T  9782849 gaacttgaaatgaattttcttcactttgcattttttt-aacaaccttctaagaacccttgatcttcaattcttcat--ctttgatcctccacatgatgtc 9782945  T
Q  151 ttgatttttcgattaacatgatttcccactacaaagcactc 191  Q
    ||||||| | |||| |||||||| | ||||||||| |||||    
T  9782946 ttgatttgttgatttacatgattcctcactacaaaacactc 9782986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 174
Target Start/End: Complemental strand, 17187422 - 17187301
Alignment:
Q  53 aacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtctt 152  Q
    ||||||||||||| |||||| ||||||||||||||||||| | ||| ||||||||| ||| |||||||||||||||| |  ||| ||||  |||||| ||    
T  17187422 aacttgaaatgaattttctttactttgtattgtcttcaaataacttctaagaaccactgaacttcaatcttcatatcctcaatcattcacttgatgtgtt 17187323  T
Q  153 gatttttcgattaacatgattt 174  Q
      ||| |||||| |||||||||    
T  17187322 attttgtcgatttacatgattt 17187301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 100 - 186
Target Start/End: Complemental strand, 9288412 - 9288326
Alignment:
Q  100 taagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtcttgatttttcgattaacatgatttcccactacaaag 186  Q
    |||||||||||| ||||||||||||||||| |||||||||||  |||||||||| |||  ||||| |||||||||| ||||| ||||    
T  9288412 taagaaccattggtcttcaatcttcatatccttgatccttcacttgatgtcttgttttgccgatttacatgatttctcactaaaaag 9288326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 200 - 277
Target Start/End: Original strand, 12111407 - 12111482
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacata 277  Q
    |||||||||||||||||||||||||| | ||||||||||| ||||||||||||| |||| ||||||||| ||||||||    
T  12111407 tgttcctcaaaccattgacaactcctct-attctcatctt-tttgtcttcaaatgcaaataaaagtactaaaaacata 12111482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 81 - 165
Target Start/End: Original strand, 17339707 - 17339792
Alignment:
Q  81 attgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatct-ttgatccttcatgtgatgtcttgatttttcgatta 165  Q
    |||||||||||||| |||||||||| || ||||||||| ||| ||||||| ||||||||||||||||| ||||| ||| |||||||    
T  17339707 attgtcttcaaaaatcttttaagaatcactgatcttcattctccatatctcttgatccttcatgtgatatcttgctttgtcgatta 17339792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 284
Target Start/End: Original strand, 1676370 - 1676454
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacatagccaaaa 284  Q
    |||||||||||||||||||||||||| ||  | |||||||||||||||||||||  ||||||||||||  |||| ||| ||||||    
T  1676370 tgttcctcaaaccattgacaactcctctatctttcatcttatttgtcttcaaatgtaaagaaaagtacaaaaaatataaccaaaa 1676454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 284
Target Start/End: Original strand, 1682898 - 1682982
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacatagccaaaa 284  Q
    |||||||||||||||||||||||||| ||  | |||||||||||||||||||||  ||||||||||||  |||| ||| ||||||    
T  1682898 tgttcctcaaaccattgacaactcctctatctttcatcttatttgtcttcaaatgtaaagaaaagtacaaaaaatataaccaaaa 1682982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 311
Target Start/End: Original strand, 25315306 - 25315418
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtact-taaaacatagccaaaataacacatgatgtt 298  Q
    ||||||||||| |||||||||||||| ||  ||||||||||||| |||||||||  |||||||||||||  |||||||| | |||||  || |||||| |    
T  25315306 tgttcctcaaagcattgacaactcctctatctctcatcttatttatcttcaaatgtaaagaaaagtactaaaaaacataactaaaatgtcatatgatgct 25315405  T
Q  299 ccgtcatcaatat 311  Q
    | |||||||||||    
T  25315406 cggtcatcaatat 25315418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 52 - 175
Target Start/End: Complemental strand, 29437711 - 29437598
Alignment:
Q  52 gaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtct 151  Q
    |||||| ||||||| |||||||||||||||||||||||          ||||||||||||| |||||||||||||||| | ||||||||| |||||||||    
T  29437711 gaacttcaaatgaagtttcttcactttgtattgtcttc----------taagaaccattgaacttcaatcttcatatcctcgatccttcacgtgatgtct 29437622  T
Q  152 tgatttttcgattaacatgatttc 175  Q
    ||  ||  ||||| ||||||||||    
T  29437621 tgtcttgccgatttacatgatttc 29437598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 200 - 306
Target Start/End: Original strand, 9783058 - 9783165
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaag-aaaagtacttaaaacatagccaaaataacacatgatgtt 298  Q
    |||||||||||| ||||||||||||| ||| |||||||| ||||| ||||||||  |||| ||||||||| ||||||||| ||||||  || |||||| |    
T  9783058 tgttcctcaaactattgacaactcctctaactctcatctcatttgccttcaaatgtaaagaaaaagtactaaaaacataggcaaaatgtcatatgatgct 9783157  T
Q  299 ccgtcatc 306  Q
    | ||||||    
T  9783158 ctgtcatc 9783165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 52 - 138
Target Start/End: Complemental strand, 21077483 - 21077397
Alignment:
Q  52 gaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatcct 138  Q
    |||||||||||||| ||| |||| |||||||||||||| |  ||||| |||||||||||||| ||||||| ||||| ||| ||||||    
T  21077483 gaacttgaaatgaattttattcaatttgtattgtcttcgattaccttctaagaaccattgatattcaatcctcataacttcgatcct 21077397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 208 - 284
Target Start/End: Original strand, 1696652 - 1696726
Alignment:
Q  208 aaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacatagccaaaa 284  Q
    |||||||||||||||||||||  |||||||||||||||||||||||  ||| |||||||||  ||| ||||||||||    
T  1696652 aaaccattgacaactcctatatctctcatcttatttgtcttcaaatgtaaataaaagtact--aaatatagccaaaa 1696726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 199 - 299
Target Start/End: Complemental strand, 22119687 - 22119586
Alignment:
Q  199 ttgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacatagc-caaaataacacatgatgt 297  Q
    ||||||||||||||||||||||||||||||| |  | ||| ||||| |||||||| |||||||||  ||| ||||||||||  |||||| || |||||||    
T  22119687 ttgttcctcaaaccattgacaactcctataaataacttctaatttgccttcaaatgcaaagaaaataactaaaaacatagcataaaatatcatatgatgt 22119588  T
Q  298 tc 299  Q
    ||    
T  22119587 tc 22119586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 52 - 141
Target Start/End: Complemental strand, 22119870 - 22119782
Alignment:
Q  52 gaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttca 141  Q
    ||||||||||| || ||| | |||||| ||||||| ||||||||| | ||||||||||||||||||||| |||||||| || ||||||||    
T  22119870 gaacttgaaattaattttgtacacttt-tattgtcctcaaaaaccctctaagaaccattgatcttcaatattcatatccttaatccttca 22119782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 52 - 153
Target Start/End: Complemental strand, 26160005 - 26159905
Alignment:
Q  52 gaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtct 151  Q
    |||||||||||||| ||||||||  || | |||  |||||| ||||| |||||||||||||||||||||||||||||| |  ||||||||  ||||||||    
T  26160005 gaacttgaaatgaattttcttcaacttat-ttgatttcaaagaccttataagaaccattgatcttcaatcttcatatcctgaatccttcacatgatgtct 26159907  T
Q  152 tg 153  Q
    ||    
T  26159906 tg 26159905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 284
Target Start/End: Complemental strand, 18898031 - 18897947
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacatagccaaaa 284  Q
    ||||||| ||||||||||||| || | ||  ||||| ||||||||||||||||| |||||||||||| | |||||| ||||||||    
T  18898031 tgttccttaaaccattgacaaatcatctatctctcaacttatttgtcttcaaatgcaaagaaaagtagtaaaaacacagccaaaa 18897947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 284
Target Start/End: Original strand, 25050141 - 25050224
Alignment:
Q  201 gttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacatagccaaaa 284  Q
    |||||||||||| |||| || | || ||| | ||||||||||||||||||||| |||| |||| |||| |||||||||||||||    
T  25050141 gttcctcaaaccgttgataatttctctaactttcatcttatttgtcttcaaatacaaataaaaatactaaaaacatagccaaaa 25050224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 77 - 142
Target Start/End: Complemental strand, 32022018 - 32021954
Alignment:
Q  77 ttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcat 142  Q
    ||||||||||||||||| ||||||  |||||||||||||||| |||||||||  ||||||||||||    
T  32022018 ttgtattgtcttcaaaa-cctttttggaaccattgatcttcattcttcatatacttgatccttcat 32021954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 200 - 268
Target Start/End: Complemental strand, 4953722 - 4953654
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtact 268  Q
    |||||||||||||||| ||||||||| ||  || |||||||||| ||||||||| ||||||||| ||||    
T  4953722 tgttcctcaaaccattaacaactcctttatctcacatcttatttctcttcaaatacaaagaaaaatact 4953654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 277
Target Start/End: Complemental strand, 15192212 - 15192166
Alignment:
Q  231 tctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacata 277  Q
    ||||||||||||||||||||||| |||||||||||||  ||||||||    
T  15192212 tctcatcttatttgtcttcaaatgcaaagaaaagtacgaaaaacata 15192166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 179
Target Start/End: Complemental strand, 18444451 - 18444373
Alignment:
Q  101 aagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtcttgatttttcgattaacatgatttcccac 179  Q
    |||||||||||||||||||||||  |||| | ||||||||| ||||||||||| |||   |||| |||||| |||||||    
T  18444451 aagaaccattgatcttcaatctttgtatcatcgatccttcacgtgatgtcttgttttgcagatttacatgacttcccac 18444373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 77 - 186
Target Start/End: Complemental strand, 10576678 - 10576569
Alignment:
Q  77 ttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtcttgatttttcgattaacatgatttcc 176  Q
    |||| ||| ||||||||||||| ||| || ||| | |||| | |||||||||| | |||||||||  |||||||||| |||| ||||| |||| |||||     
T  10576678 ttgtgttgccttcaaaaaccttctaaaaatcatagttctttattcttcatatcctcgatccttcacatgatgtcttgtttttccgatttacataatttct 10576579  T
Q  177 cactacaaag 186  Q
    ||||| ||||    
T  10576578 cactagaaag 10576569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 263
Target Start/End: Complemental strand, 5125629 - 5125581
Alignment:
Q  215 tgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaa 263  Q
    |||||| |||| ||||||||||||||||||||||||||| |||| ||||    
T  5125629 tgacaattcctctaattctcatcttatttgtcttcaaatgcaaaaaaaa 5125581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 263
Target Start/End: Complemental strand, 27302818 - 27302755
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaa 263  Q
    ||||||||||||||||||||||| || ||  | ||||| ||||||||||||||| ||| |||||    
T  27302818 tgttcctcaaaccattgacaacttctctatctatcatcatatttgtcttcaaatgcaacgaaaa 27302755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 118
Target Start/End: Original strand, 13275631 - 13275672
Alignment:
Q  77 ttgtattgtcttcaaaaaccttttaagaaccattgatcttca 118  Q
    |||||||||||||||||| |||  ||||||||||||||||||    
T  13275631 ttgtattgtcttcaaaaaacttcaaagaaccattgatcttca 13275672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 284
Target Start/End: Original strand, 31859955 - 31860039
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacatagccaaaa 284  Q
    |||||||||||| |||||||||| || ||| |  | | |||||| ||||||||| |||| ||||  ||| |||||||||||||||    
T  31859955 tgttcctcaaacaattgacaacttctctaaataaccttttatttttcttcaaatgcaaaaaaaataactaaaaacatagccaaaa 31860039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 92; Significance: 1e-44; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 56 - 195
Target Start/End: Original strand, 19219079 - 19219218
Alignment:
Q  56 ttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtcttgat 155  Q
    |||||||||| ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| |    
T  19219079 ttgaaatgaattttattcactttgtattgtcttcaaaaaccttctaagaaccattgatcttcaatcttcatatccttgatccttcatgtgatgtcttggt 19219178  T
Q  156 ttttcgattaacatgatttcccactacaaagcactcaaaa 195  Q
    ||   |||| |||||||| | ||||||||| |||||||||    
T  19219179 ttgaagatttacatgattcctcactacaaaacactcaaaa 19219218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 53 - 190
Target Start/End: Original strand, 19263769 - 19263909
Alignment:
Q  53 aacttgaaatgaaatttcttcactttgtattgtcttcaaaaa---ccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgt 149  Q
    ||||||||||||| |||||||||||||||||||||| |||||   |||| || ||||||||||||||||||||||||||| ||||||||||||||||||     
T  19263769 aacttgaaatgaattttcttcactttgtattgtcttaaaaaaaaaccttctatgaaccattgatcttcaatcttcatatccttgatccttcatgtgatga 19263868  T
Q  150 cttgatttttcgattaacatgatttcccactacaaagcact 190  Q
    ||||||||  |||||  ||||||| |  |||||||| ||||    
T  19263869 cttgatttgacgatttccatgattccttactacaaaacact 19263909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 25 - 195
Target Start/End: Original strand, 33914405 - 33914574
Alignment:
Q  25 atcgttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttc 124  Q
    ||||||||||||| |||||||||||| || | ||||||||| |||| | |||||| ||| |||||||||  ||| | | |||||||||  ||||| ||||    
T  33914405 atcgttcttccgtatggaaactcataagagcctgaaatgaattttccttactttgaattatcttcaaaattcttcttaaaaccattgaa-ttcaaccttc 33914503  T
Q  125 atatctttgatccttcatgtgatgtcttgatttttcgattaacatgatttcccactacaaagcactcaaaa 195  Q
    ||||| ||||||||||| ||||||||||||||  |||||| |||||||||| ||||||||| |||||||||    
T  33914504 atatccttgatccttcacgtgatgtcttgattcgtcgatttacatgatttctcactacaaaacactcaaaa 33914574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 25 - 185
Target Start/End: Complemental strand, 10342064 - 10341904
Alignment:
Q  25 atcgttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttc 124  Q
    ||||||||||||| | ||||||| || |||||||||||||  |||  ||||||||||||||||||||||||||| ||||||||| ||||||||||||||     
T  10342064 atcgttcttccgtctagaaactcctaggaacttgaaatgagtttttctcactttgtattgtcttcaaaaaccttctaagaaccactgatcttcaatcttt 10341965  T
Q  125 atatctttgatccttcatgtgatgtcttgatttttcgattaacatgatttcccactacaaa 185  Q
     |||| || ||||||||  |||||| | ||||| | |||| |||||||||| ||| |||||    
T  10341964 ctatccttaatccttcacttgatgtttggatttgttgatttacatgatttctcacaacaaa 10341904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 71 - 195
Target Start/End: Complemental strand, 11475078 - 11474954
Alignment:
Q  71 ttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtcttgatttttcgattaacatg 170  Q
    |||||||||||||||||||||| | ||| ||||||||||| ||||| |||| ||||||||| ||||||||||||||||||||| |||  ||||| |||||    
T  11475078 ttcactttgtattgtcttcaaatatcttctaagaaccatttatcttgaatcctcatatcttcgatccttcatgtgatgtcttgttttgccgatttacatg 11474979  T
Q  171 atttcccactacaaagcactcaaaa 195  Q
    ||||| ||||| |||  ||||||||    
T  11474978 atttctcactaaaaaagactcaaaa 11474954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 67 - 191
Target Start/End: Complemental strand, 16970697 - 16970573
Alignment:
Q  67 tttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtcttgatttttcgattaa 166  Q
    ||||||||  ||||||| |||||||||||||| |||||||| ||| ||||||| ||||||||| |||||||||||  |||||||||||||| |||||| |    
T  16970697 tttcttcatcttgtattttcttcaaaaaccttctaagaaccgttggtcttcaaacttcatatccttgatccttcacatgatgtcttgatttgtcgattta 16970598  T
Q  167 catgatttcccactacaaagcactc 191  Q
    ||||||| || |||||||| |||||    
T  16970597 catgattccctactacaaaacactc 16970573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 52 - 180
Target Start/End: Complemental strand, 18474420 - 18474292
Alignment:
Q  52 gaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtct 151  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||| |||| ||||||||  ||||||||| | ||||| |||||||||||| ||||||    
T  18474420 gaacttgaaatgaattttcttcactttgtattgtcttcaaataccttctaagtaccattgaaattcaatctttacatcttcgatccttcatgtaatgtct 18474321  T
Q  152 tgatttttcgattaacatgatttcccact 180  Q
    ||  ||  ||||| |||||||||| ||||    
T  18474320 tgtgttcccgatttacatgatttctcact 18474292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 27 - 185
Target Start/End: Complemental strand, 18066072 - 18065914
Alignment:
Q  27 cgttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttt-taagaaccattgatcttcaatcttca 125  Q
    |||||||  |||||||||||| || ||| |||||||||| ||||||||||||||||| |||||||||| |||| |||||||||||| |||| ||| | |     
T  18066072 cgttctttggtttggaaactcctaggaagttgaaatgaattttcttcactttgtattttcttcaaaaaactttctaagaaccattggtctttaat-tcct 18065974  T
Q  126 tatctttgatccttcatgtgatgtcttgatttttcgattaacatgatttcccactacaaa 185  Q
    | || ||||||||| ||||||||||||||||| || ||| ||||||||||  ||||||||    
T  18065973 tgtcattgatcctttatgtgatgtcttgatttgtctatttacatgatttcttactacaaa 18065914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 52 - 175
Target Start/End: Original strand, 19542988 - 19543111
Alignment:
Q  52 gaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtct 151  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||| ||||||| |||||  ||||||||| | ||  | |||||||||||||||||||    
T  19542988 gaacttgaaatgaattttcttcactttgtattgtcttcaaataccttctaagaactattgaaattcaatctttacattctcgatccttcatgtgatgtct 19543087  T
Q  152 tgatttttcgattaacatgatttc 175  Q
    ||  ||  ||||||||||||||||    
T  19543088 tgtgttcccgattaacatgatttc 19543111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 25 - 195
Target Start/End: Complemental strand, 21018154 - 21017985
Alignment:
Q  25 atcgttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttc 124  Q
    ||||||||||| |||| ||| || || |||||||||||||| || ||||| |||||||| ||||||||||  || ||  |||||||| |||||||| |||    
T  21018154 atcgttcttccatttgtaaattcctaggaacttgaaatgaatttccttcattttgtattatcttcaaaaaagttatagaaaccattggtcttcaat-ttc 21018056  T
Q  125 atatctttgatccttcatgtgatgtcttgatttttcgattaacatgatttcccactacaaagcactcaaaa 195  Q
    ||||| ||||||||||| || |||||||||||| | || | |||||||||| || |||||| |||||||||    
T  21018055 atatcattgatccttcacgtaatgtcttgatttgttgaattacatgatttctcaatacaaaacactcaaaa 21017985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 200 - 278
Target Start/End: Original strand, 33914637 - 33914715
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacatag 278  Q
    ||||||||||||| |||||||||||||||| |||||||||||||||||| |||| |||||||||||||| |||||||||    
T  33914637 tgttcctcaaaccgttgacaactcctataactctcatcttatttgtcttgaaatgcaaagaaaagtactaaaaacatag 33914715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 28 - 195
Target Start/End: Complemental strand, 25883377 - 25883211
Alignment:
Q  28 gttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaa-tcttcat 126  Q
    |||||| ||| || |||||| || |||||||||||||| ||||||||||||||||||||||||| |||||| |||||||| ||||||||||| |||||      
T  25883377 gttctttcgtctgaaaactcctaggaacttgaaatgaattttcttcactttgtattgtcttcaacaaccttctaagaacccttgatcttcaattcttc-- 25883280  T
Q  127 atctttgatccttcatgtgatgtcttgatttttcgattaacatgatttcccactacaaagcactcaaaa 195  Q
    ||| ||||||||| |   |||||||||||||   |||  |||||||| | ||||| ||| |||||||||    
T  25883279 atccttgatccttaacaagatgtcttgatttgatgatgtacatgattcctcactataaaacactcaaaa 25883211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 61 - 185
Target Start/End: Original strand, 25919345 - 25919468
Alignment:
Q  61 atgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtcttgatttttc 160  Q
    ||||| |||| |||||||| ||| ||||||||||| || ||| || | ||||||||||||||||||||| ||||||||||||||||| ||||| ||| ||    
T  25919345 atgaattttcgtcactttgcattatcttcaaaaac-ttctaaaaatcgttgatcttcaatcttcatatccttgatccttcatgtgatatcttggtttgtc 25919443  T
Q  161 gattaacatgatttcccactacaaa 185  Q
    |||| |||||||| | |||||||||    
T  25919444 gatttacatgattcctcactacaaa 25919468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 157
Target Start/End: Original strand, 1475117 - 1475248
Alignment:
Q  25 atcgttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaa-tctt 123  Q
    ||||||||| ||| || |||||| || ||||||||||| || ||||||||||||||||| ||||||| |||||| |||||||  ||||||||||| ||||    
T  1475117 atcgttctttcgtctgaaaactcctaggaacttgaaataaattttcttcactttgtattatcttcaataaccttctaagaactcttgatcttcaactctt 1475216  T
Q  124 catatctttgatccttcatgtgatgtcttgattt 157  Q
    |  ||| |||||||||||  ||||||||||||||    
T  1475217 c--atccttgatccttcacatgatgtcttgattt 1475248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 76 - 186
Target Start/End: Complemental strand, 26418946 - 26418836
Alignment:
Q  76 tttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtcttgatttttcgattaacatgatttc 175  Q
    |||||||| |||| ||||||||| ||||||||||  ||||| |||||||||||| ||||||||||||| ||||||||  |||| ||||| ||||||||||    
T  26418946 tttgtattttctttaaaaaccttctaagaaccatcaatctttaatcttcatatccttgatccttcatgcgatgtcttatttttccgatttacatgatttc 26418847  T
Q  176 ccactacaaag 186  Q
     ||||| ||||    
T  26418846 tcactaaaaag 26418836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 195
Target Start/End: Complemental strand, 27415444 - 27415276
Alignment:
Q  25 atcgttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttc 124  Q
    ||||||||| ||| | ||||||| || ||| |||||||||| |||||||||||| ||| |||| ||||||| || ||||||| | || |||||||| | |    
T  27415444 atcgttctttcgtcttgaaactcctaggaagttgaaatgaattttcttcactttttat-gtctccaaaaacattctaagaactaatggtcttcaat-tcc 27415347  T
Q  125 atatctttgatccttcatgtgatgtcttgatttttcgattaacatgatttcccactacaaagcactcaaaa 195  Q
     |||| ||||||||| ||||||||||||||||  || ||| ||||||||||  |||||||| |||||||||    
T  27415346 ttatccttgatcctttatgtgatgtcttgattggtctatttacatgatttcttactacaaaacactcaaaa 27415276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 69 - 195
Target Start/End: Complemental strand, 28422685 - 28422560
Alignment:
Q  69 tcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtcttgatttttcgattaaca 168  Q
    |||||||||||||||||||||||| ||||| ||| | | ||||| |||||||||||||||| |  |||||||| ||||||| ||||||| |||||  |||    
T  28422685 tcttcactttgtattgtcttcaaataccttctaacatc-attgaacttcaatcttcatatcctcaatccttcacgtgatgtattgatttgtcgatctaca 28422587  T
Q  169 tgatttcccactacaaagcactcaaaa 195  Q
    ||||||| ||||||||| || ||||||    
T  28422586 tgatttctcactacaaaacattcaaaa 28422560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 52 - 185
Target Start/End: Original strand, 5632407 - 5632539
Alignment:
Q  52 gaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtct 151  Q
    |||||||||||||| |||||||| ||| |||| |||||||| ||||| |||||||| ||| ||||||||||| ||||  |  || || ||||||||||||    
T  5632407 gaacttgaaatgaattttcttcaatttttattatcttcaaataccttataagaaccgttg-tcttcaatctttatattatcaattctccatgtgatgtct 5632505  T
Q  152 tgatttttcgattaacatgatttcccactacaaa 185  Q
    || ||| |||||| |||||||||| |||||||||    
T  5632506 tggtttgtcgatttacatgatttctcactacaaa 5632539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 27 - 175
Target Start/End: Original strand, 23908110 - 23908258
Alignment:
Q  27 cgttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcat 126  Q
    ||||||||| ||| |||| || |  ||| ||| |||||| ||||  || |||||||||||||||||||| || ||| ||||||||||||| |||||||||    
T  23908110 cgttcttcctttttgaaattccttggaatttggaatgaattttccccaatttgtattgtcttcaaaaactttctaaaaaccattgatcttaaatcttcat 23908209  T
Q  127 atctttgatccttcatgtgatgtcttgatttttcgattaacatgatttc 175  Q
    ||  ||||||||||||| ||||||||| |||  || || ||||||||||    
T  23908210 attcttgatccttcatgagatgtcttgctttgccgctttacatgatttc 23908258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 200 - 307
Target Start/End: Original strand, 25919539 - 25919647
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacatagcca-aaataacacatgatgtt 298  Q
    ||||||||||||||||||||| || | ||| ||||||||||||||||||||||| |||||||| ||||| |||||||| ||| ||||| || |||||| |    
T  25919539 tgttcctcaaaccattgacaaatcatctaactctcatcttatttgtcttcaaattcaaagaaatgtactaaaaacataaccagaaatatcatatgatgct 25919638  T
Q  299 ccgtcatca 307  Q
    || ||||||    
T  25919639 ccatcatca 25919647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 52 - 173
Target Start/End: Original strand, 8402415 - 8402537
Alignment:
Q  52 gaacttgaaatgaaatttcttcactttgtattgtcttcaaaaacctttt-aagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtc 150  Q
    ||||||||||||||  ||||||||||| |||| |||||||| ||||||  ||||||||| | ||||||||||||||||| | |||||||||  |||||||    
T  8402415 gaacttgaaatgaatgttcttcactttatattttcttcaaatacctttcgaagaaccatagttcttcaatcttcatatcctcgatccttcacttgatgtc 8402514  T
Q  151 ttgatttttcgattaacatgatt 173  Q
    ||||| | |||||| ||| ||||    
T  8402515 ttgatctatcgatttacacgatt 8402537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 80 - 153
Target Start/End: Original strand, 21829025 - 21829098
Alignment:
Q  80 tattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtcttg 153  Q
    ||||||||||||| |||||  | ||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  21829025 tattgtcttcaaagaccttcgatgaaccattgatcttcaatcttcatatccttgatacttcatgtgatgtcttg 21829098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 202 - 285
Target Start/End: Original strand, 1475357 - 1475441
Alignment:
Q  202 ttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaag-aaaagtacttaaaacatagccaaaat 285  Q
    |||||||||||||||| ||||||| ||| |||||||||||| | |||||||| ||||| ||||||||| ||||||||||||||||    
T  1475357 ttcctcaaaccattgaaaactcctctaactctcatcttattagacttcaaatgcaaagaaaaagtactaaaaacatagccaaaat 1475441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 25 - 117
Target Start/End: Complemental strand, 11521442 - 11521350
Alignment:
Q  25 atcgttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttc 117  Q
    ||||||||||||| || |||||| || |||||||||||||| ||||||| ||||||||| ||||||| |||||| ||| |||| |||||||||    
T  11521442 atcgttcttccgtctgaaaactcctaggaacttgaaatgaattttcttcgctttgtattatcttcaacaaccttctaacaacccttgatcttc 11521350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 49 - 195
Target Start/End: Original strand, 2729484 - 2729625
Alignment:
Q  49 tacgaacttgaaatgaaatttcttcactttgtattgtctt--caaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtga 146  Q
    ||||||||||||||||  ||| ||||||||||||||||||   |||||||||||||||  | |||||||||||| |||||       |||||| | ||||    
T  2729484 tacgaacttgaaatgatttttattcactttgtattgtcttaaaaaaaaccttttaagagtcgttgatcttcaatattcat-------atccttgacgtga 2729576  T
Q  147 tgtcttgatttttcgattaacatgatttcccactacaaagcactcaaaa 195  Q
    |||||| ||||||||||| ||| |||||  ||||||||| |||||||||    
T  2729577 tgtcttaatttttcgatttacaagatttatcactacaaaacactcaaaa 2729625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 203 - 308
Target Start/End: Original strand, 19219289 - 19219395
Alignment:
Q  203 tcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacatagccaaaa-taacacatgatgttccg 301  Q
    |||||||||||||||||||||| |||| ||||||||||||| ||||||||  ||||||||| |||| |||||| ||| |||| || || |||||| | ||    
T  19219289 tcctcaaaccattgacaactccaataactctcatcttatttatcttcaaaagcaaagaaaaatactaaaaacacagctaaaagtatcatatgatgcttcg 19219388  T
Q  302 tcatcaa 308  Q
    |||||||    
T  19219389 tcatcaa 19219395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 77 - 153
Target Start/End: Complemental strand, 25188983 - 25188906
Alignment:
Q  77 ttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcata-tctttgatccttcatgtgatgtcttg 153  Q
    |||||||||||| |||||||| ||||||||||||||| |||| |||||||| || |||||||||| ||||||||||||    
T  25188983 ttgtattgtcttaaaaaacctcttaagaaccattgatattcattcttcatattccttgatccttcttgtgatgtcttg 25188906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 202 - 285
Target Start/End: Complemental strand, 12573328 - 12573244
Alignment:
Q  202 ttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaag-aaaagtacttaaaacatagccaaaat 285  Q
    ||||||||||||||||||| || | ||| ||||||||||||||||||| ||| ||||| ||||||||| |||||||| |||||||    
T  12573328 ttcctcaaaccattgacaaatcatctaactctcatcttatttgtcttctaatgcaaagaaaaagtactaaaaacataaccaaaat 12573244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 202 - 285
Target Start/End: Complemental strand, 13549792 - 13549708
Alignment:
Q  202 ttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaag-aaaagtacttaaaacatagccaaaat 285  Q
    ||||||||||||||||||| || | ||| ||||||||||||||||||| ||| ||||| ||||||||| |||||||| |||||||    
T  13549792 ttcctcaaaccattgacaaatcatctaactctcatcttatttgtcttctaatgcaaagaaaaagtactaaaaacataaccaaaat 13549708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 52 - 195
Target Start/End: Complemental strand, 12573540 - 12573398
Alignment:
Q  52 gaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaa-tcttcatatctttgatccttcatgtgatgtc 150  Q
    ||||||||||| || |||||||||| |||||||||||||| |||||| ||| || | ||||||||||| |||||  ||   |||||||||| || |||||    
T  12573540 gaacttgaaataaattttcttcactgtgtattgtcttcaacaaccttctaacaaaccttgatcttcaattcttc--attggtgatccttcacgtaatgtc 12573443  T
Q  151 ttgatttttcgattaacatgatttcccactacaaagcactcaaaa 195  Q
    || |||| | |||| |||||||| | ||||||||| |||| ||||    
T  12573442 ttcatttgttgatttacatgattcctcactacaaaacactaaaaa 12573398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 52 - 195
Target Start/End: Complemental strand, 13550004 - 13549862
Alignment:
Q  52 gaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaa-tcttcatatctttgatccttcatgtgatgtc 150  Q
    ||||||||||| || |||||||||| |||||||||||||| |||||| ||| || | ||||||||||| |||||  ||   |||||||||| || |||||    
T  13550004 gaacttgaaataaattttcttcactgtgtattgtcttcaacaaccttctaacaaaccttgatcttcaattcttc--attggtgatccttcacgtaatgtc 13549907  T
Q  151 ttgatttttcgattaacatgatttcccactacaaagcactcaaaa 195  Q
    || |||| | |||| |||||||| | ||||||||| |||| ||||    
T  13549906 ttcatttgttgatttacatgattcctcactacaaaacactaaaaa 13549862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 200 - 277
Target Start/End: Complemental strand, 21017917 - 21017840
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacata 277  Q
    |||||||||||  |||| |||||||| ||| ||||||||||||| ||||||||| ||||||||| |||| ||||||||    
T  21017917 tgttcctcaaattattgccaactcctctaactctcatcttatttttcttcaaatgcaaagaaaaatactaaaaacata 21017840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 199 - 273
Target Start/End: Complemental strand, 10341836 - 10341763
Alignment:
Q  199 ttgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaa 273  Q
    ||||||||||| ||||||||||||||| |||||| |||||||||||  ||||||| || ||||||||||| ||||    
T  10341836 ttgttcctcaa-ccattgacaactcctctaattcacatcttatttgatttcaaatgcagagaaaagtactaaaaa 10341763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 200 - 278
Target Start/End: Complemental strand, 13911305 - 13911227
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacatag 278  Q
    |||||||||||||||||||||||| | ||  ||||  |||| |||||||||||| ||||||||| |||| |||||||||    
T  13911305 tgttcctcaaaccattgacaactcttctatctctctacttacttgtcttcaaatacaaagaaaattactaaaaacatag 13911227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 55 - 141
Target Start/End: Original strand, 30493132 - 30493218
Alignment:
Q  55 cttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttca 141  Q
    |||| |||||| |||||||||||| ||| |||||||||   ||| |||||||| || ||||| |||||||||||||| |||||||||    
T  30493132 cttgcaatgaattttcttcactttatatcgtcttcaaatgtcttctaagaaccgttaatctttaatcttcatatcttcgatccttca 30493218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 273
Target Start/End: Complemental strand, 10303504 - 10303427
Alignment:
Q  196 tacttgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaa 273  Q
    ||||| || ||||||||||||||||||||| |||||| |||||||||||  |||||||  | ||||||||||| ||||    
T  10303504 tacttttttctcaaaccattgacaactcctctaattcacatcttatttgatttcaaatgtagagaaaagtactaaaaa 10303427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 157
Target Start/End: Complemental strand, 13911530 - 13911403
Alignment:
Q  28 gttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcata 127  Q
    |||||||| ||||||||||| |  |||| ||||||||| |||||| |  | |||||||||| ||||  ||| ||||||||||| |  || ||||||||||    
T  13911530 gttcttccatttggaaactccttggaacatgaaatgaa-tttctttagatcgtattgtcttgaaaattcttctaagaaccatttaattt-aatcttcata 13911433  T
Q  128 tctttgatccttcatgtgatgtcttgattt 157  Q
    || ||||||||||||  |||||||||||||    
T  13911432 tccttgatccttcataagatgtcttgattt 13911403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 199 - 259
Target Start/End: Original strand, 8402624 - 8402684
Alignment:
Q  199 ttgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaag 259  Q
    ||||||||||||||||||||||||||| ||| |  ||||||||||| |||||||| |||||    
T  8402624 ttgttcctcaaaccattgacaactcctctaaattacatcttatttgccttcaaatgcaaag 8402684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 101 - 153
Target Start/End: Original strand, 26387758 - 26387810
Alignment:
Q  101 aagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtcttg 153  Q
    |||||||||| ||||||||| ||||||||||||||||||||  ||||||||||    
T  26387758 aagaaccattaatcttcaatattcatatctttgatccttcacttgatgtcttg 26387810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 200 - 263
Target Start/End: Complemental strand, 11521180 - 11521117
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaa 263  Q
    ||||||||||||||||||||||||||  ||  |||||||||||| ||||||||| ||| |||||    
T  11521180 tgttcctcaaaccattgacaactcctccaacgctcatcttatttttcttcaaatgcaatgaaaa 11521117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 309
Target Start/End: Complemental strand, 25883143 - 25883033
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaag-aaaagtacttaaaacatagccaaaataacacatgatgtt 298  Q
    |||||||||||  ||||||||||| | | | ||||||||||||| ||||||||| ||| | |||||||||  ||| ||||||||| || || |||||| |    
T  25883143 tgttcctcaaaaaattgacaactcttctgactctcatcttatttttcttcaaatgcaatgaaaaagtactagaaatatagccaaagtatcatatgatgct 25883044  T
Q  299 ccgtcatcaat 309  Q
    | |||||||||    
T  25883043 ctgtcatcaat 25883033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 212 - 308
Target Start/End: Complemental strand, 17637131 - 17637034
Alignment:
Q  212 cattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacatagcc-aaaataacacatgatgttccgtcatcaa 308  Q
    |||| ||||||||| | ||||| |||||||||||||| || | |||||||||||| |  |||||||||| |||||  || |||||| |||||||||||    
T  17637131 catttacaactcctcttattcttatcttatttgtctttaattacaaagaaaagtaatataaacatagccaaaaatgtcatatgatgctccgtcatcaa 17637034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 240
Target Start/End: Original strand, 2729693 - 2729733
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatctta 240  Q
    |||||||  ||||||||||||||||||||||||||||||||    
T  2729693 tgttccttgaaccattgacaactcctataattctcatctta 2729733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 285
Target Start/End: Complemental strand, 12409498 - 12409413
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacatagccaaaat 285  Q
    ||||| |||||||||||||||||| | ||  || ||  |||||| ||||||||| |||| ||||||||| |||| |||| ||||||    
T  12409498 tgttcttcaaaccattgacaactcttttatctcccaagttatttttcttcaaatacaaataaaagtactaaaaatatagtcaaaat 12409413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 306
Target Start/End: Complemental strand, 25188796 - 25188691
Alignment:
Q  202 ttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagt-acttaaaacatagccaaaataacacatgatgttcc 300  Q
    |||| |||||||||| ||| |||| ||| |  | |||||||||||||||||| ||||||||| | | | |||| |||||| ||||| || |||||| |||    
T  25188796 ttccacaaaccattgtcaattcctctaaatgacctcttatttgtcttcaaatgcaaagaaaaataagtaaaaatatagcctaaatatcatatgatgatcc 25188697  T
Q  301 gtcatc 306  Q
    ||||||    
T  25188696 gtcatc 25188691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 130
Target Start/End: Complemental strand, 19285322 - 19285270
Alignment:
Q  78 tgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatct 130  Q
    ||||||||||||||| |||||  |||||||||||||  |||||||| ||||||    
T  19285322 tgtattgtcttcaaataccttccaagaaccattgattatcaatcttgatatct 19285270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 83; Significance: 3e-39; HSPs: 3)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 53 - 195
Target Start/End: Complemental strand, 21647 - 21505
Alignment:
Q  53 aacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtctt 152  Q
    |||||||||||||  ||||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  21647 aacttgaaatgaatattcttaactttgtattgtctttaaaaaccttctaagaaccattgatcttcaatcttcatatcattgatccttcatgtaatgtctt 21548  T
Q  153 gatttttcgattaacatgatttcccactacaaagcactcaaaa 195  Q
    | ||| |||||| |||||||| | |||| |||| ||| |||||    
T  21547 ggtttgtcgatttacatgattcctcactgcaaaacacccaaaa 21505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 41 - 174
Target Start/End: Complemental strand, 6456 - 6324
Alignment:
Q  41 gaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttc 140  Q
    ||||||| || ||||||||| |||  ||||||||||||||||| |||||||||| ||| || ||||||||| |||||||| |||||||| ||||||||||    
T  6456 gaaactcctaggaacttgaattgatttttcttcactttgtattttcttcaaaaatcttctaggaaccattggtcttcaat-ttcatatccttgatccttc 6358  T
Q  141 atgtgatgtcttgatttttcgattaacatgattt 174  Q
    | ||||||||||||||| |||||| |||||||||    
T  6357 acgtgatgtcttgatttgtcgatttacatgattt 6324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 200 - 284
Target Start/End: Complemental strand, 6236 - 6152
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacatagccaaaa 284  Q
    |||||||||||||||||| ||||| ||||| ||||||||||||||| || ||||  ||||||||||||| |||||||||||||||    
T  6236 tgttcctcaaaccattgaaaactcatataactctcatcttatttgtgtttaaatggaaagaaaagtactaaaaacatagccaaaa 6152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 82; Significance: 1e-38; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 42 - 195
Target Start/End: Original strand, 26809 - 26962
Alignment:
Q  42 aaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttca 141  Q
    |||||| || |||||||||| ||| ||||||||||||||||||||||||| ||| || ||||||||||||| ||||||| |||||||| |||||| ||||    
T  26809 aaactcctatgaacttgaaacgaattttcttcactttgtattgtcttcaagaactttctaagaaccattgaacttcaattttcatatccttgatctttca 26908  T
Q  142 tgtgatgtcttgatttttcgattaacatgatttcccactacaaagcactcaaaa 195  Q
     |||||||||| |||| |||||| |||||||||| |||||| || |||||||||    
T  26909 cgtgatgtcttaatttgtcgatttacatgatttctcactactaaacactcaaaa 26962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 280
Target Start/End: Original strand, 27032 - 27109
Alignment:
Q  203 tcctcaaaccattgacaactcctataa-ttctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacatagcc 280  Q
    ||||||| |||| |||||||| | ||| |||| ||||||||| ||||||||| |||||||||||||| |||||||||||    
T  27032 tcctcaatccatagacaactcttgtaacttct-atcttatttatcttcaaatgcaaagaaaagtactaaaaacatagcc 27109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 81; Significance: 4e-38; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 28 - 164
Target Start/End: Complemental strand, 30355591 - 30355455
Alignment:
Q  28 gttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcata 127  Q
    |||||||||| ||||||||| |  |||||||||||||| ||| |||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  30355591 gttcttccgtctggaaactcctgtgaacttgaaatgaattttattcactttttattgtcttcaaaaaccttctaagaacgattgatcttcaatcttcata 30355492  T
Q  128 tctttgatccttcatgtgatgtcttgatttttcgatt 164  Q
    || | |||||||||||||| |||||| ||| ||||||    
T  30355491 tcctcgatccttcatgtgaggtcttggtttgtcgatt 30355455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 25 - 194
Target Start/End: Original strand, 17860286 - 17860454
Alignment:
Q  25 atcgttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttc 124  Q
    ||||||||| ||  ||||||||| || |||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||  ||||||| |||    
T  17860286 atcgttctttcgactggaaactcctaggaacttgaaatgaattttcttcactttgtattgtctacaaaaaccttctaagaaccattgtccttcaat-ttc 17860384  T
Q  125 atatctttgatccttcatgtgatgtcttgatttttcgattaacatgatttcccactacaaagcactcaaa 194  Q
     |||  || |||||||| |||||||| |||||| | || | |||||||||| ||||||||| ||||||||    
T  17860385 ttatactttatccttcacgtgatgtcctgatttgttgaattacatgatttctcactacaaaacactcaaa 17860454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 53 - 181
Target Start/End: Original strand, 26499712 - 26499840
Alignment:
Q  53 aacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtctt 152  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||| |||| ||| | ||||    
T  26499712 aacttgaaatgaattttctttactttgtattgtcttcaaaaaccttctaagaaccattgatcttcaatcttcatatcctcgatctttcacgtggtatctt 26499811  T
Q  153 gatttttcgattaacatgatttcccacta 181  Q
    | |||  |||||  ||||||||| |||||    
T  26499812 gttttgccgatttgcatgatttctcacta 26499840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 52 - 195
Target Start/End: Original strand, 24507307 - 24507449
Alignment:
Q  52 gaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtct 151  Q
    ||||||||||| || ||||||||||||||||| |||||| ||| ||| ||| |||||||| ||||||||||||||||| |  |||||||| |||||||||    
T  24507307 gaacttgaaataaattttcttcactttgtattttcttcataaaacttctaacaaccattg-tcttcaatcttcatatcgtcaatccttcacgtgatgtct 24507405  T
Q  152 tgatttttcgattaacatgatttcccactacaaagcactcaaaa 195  Q
    |||||| | |||| ||| |||||| ||||||||| | |||||||    
T  24507406 tgatttgttgatttacaggatttctcactacaaaactctcaaaa 24507449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 52 - 195
Target Start/End: Complemental strand, 15575174 - 15575032
Alignment:
Q  52 gaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaa-tcttcatatctttgatccttcatgtgatgtc 150  Q
    |||||||||||||| |||||||||||||||||||||||||  ||||| |||||||| ||||||||||| |||||  ||| ||||||||||| ||||||||    
T  15575174 gaacttgaaatgaattttcttcactttgtattgtcttcaacgaccttctaagaacccttgatcttcaattcttc--atcgttgatccttcacgtgatgtc 15575077  T
Q  151 ttgatttttcgattaacatgatttcccactacaaagcactcaaaa 195  Q
    ||||||| |  ||| |||||||| | | ||||||| |||| ||||    
T  15575076 ttgatttgttaatttacatgattcctcgctacaaaacacttaaaa 15575032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 71 - 181
Target Start/End: Original strand, 33638388 - 33638498
Alignment:
Q  71 ttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtcttgatttttcgattaacatg 170  Q
    ||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||| |||||||||||  |||| | ||| |||  ||||| |||||    
T  33638388 ttcactttgtattatcttcaaagaccttataagaaccattgatcttcaatcttcatatccttgatccttcacttgatatattgttttgccgatttacatg 33638487  T
Q  171 atttcccacta 181  Q
    ||||| |||||    
T  33638488 atttctcacta 33638498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 77 - 195
Target Start/End: Complemental strand, 16439683 - 16439566
Alignment:
Q  77 ttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtcttgatttttcgattaacatgatttcc 176  Q
    ||||||| ||||||||| | || ||||||||||||||||||| ||||||||||  ||||| ||||| |||||||||| ||||  |||| ||||||||||     
T  16439683 ttgtattttcttcaaaaccattctaagaaccattgatcttcattcttcatatccctgatctttcatctgatgtcttgtttttctgatttacatgatttct 16439584  T
Q  177 cactacaaagcactcaaaa 195  Q
    ||||| |||| ||||||||    
T  16439583 cactaaaaag-actcaaaa 16439566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 200 - 307
Target Start/End: Complemental strand, 15574964 - 15574857
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaag-aaaagtacttaaaacatagccaaaataacacatgatgtt 298  Q
    |||||||||||| |||||||| |||| ||| ||||||||||||||||||||||| ||||| ||||||||| | || |||||||||||  || ||||||||    
T  15574964 tgttcctcaaac-attgacaattcctctaaatctcatcttatttgtcttcaaatgcaaagaaaaagtactaacaagatagccaaaatgtcatatgatgtt 15574866  T
Q  299 ccgtcatca 307  Q
    | |||||||    
T  15574865 ctgtcatca 15574857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 217 - 284
Target Start/End: Original strand, 15576254 - 15576321
Alignment:
Q  217 acaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacatagccaaaa 284  Q
    ||||||||| ||||||||||| |||||||||| |||| |||||||||||||| |||||||||||||||    
T  15576254 acaactcctctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacatagccaaaa 15576321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 71 - 129
Target Start/End: Complemental strand, 33638317 - 33638259
Alignment:
Q  71 ttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatc 129  Q
    ||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||    
T  33638317 ttcactttgtattatcttcaaagaccttataagaaccattgatcttcaatcttcatatc 33638259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 43 - 195
Target Start/End: Complemental strand, 15998769 - 15998619
Alignment:
Q  43 aactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcat 142  Q
    ||||| || |||||||||||||| || |||||||||||||||||| ||| |||||| ||||| ||  || |||||||  ||| |||| |||||| ||||     
T  15998769 aactcctaggaacttgaaatgaatttgcttcactttgtattgtctacaacaaccttctaagagcccatggtcttcaa--ttcttatccttgatcattcac 15998672  T
Q  143 gtgatgtcttgatttttcgattaacatgatttcccactacaaagcactcaaaa 195  Q
     ||||||||||||||    ||| |||||||| | ||||||||| |||||||||    
T  15998671 atgatgtcttgatttggtcatttacatgattcctcactacaaaacactcaaaa 15998619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 206 - 305
Target Start/End: Complemental strand, 30355360 - 30355260
Alignment:
Q  206 tcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacatagcc-aaaataacacatgatgttccgtca 304  Q
    ||||||||||||||||| || ||| |||||||||||||  |||||||| |||  ||||||||| ||||||||||| |||||| || |||||| |||||||    
T  30355360 tcaaaccattgacaacttctctaactctcatcttatttaccttcaaatgcaagtaaaagtactaaaaacatagccaaaaatatcatatgatgctccgtca 30355261  T
Q  305 t 305  Q
    |    
T  30355260 t 30355260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 200 - 263
Target Start/End: Original strand, 13759526 - 13759589
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaa 263  Q
    |||||||||||||||||||||||||| ||| ||||||||||||| ||||||||| |||| ||||    
T  13759526 tgttcctcaaaccattgacaactcctctaactctcatcttatttatcttcaaatacaaataaaa 13759589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 199 - 280
Target Start/End: Original strand, 14924491 - 14924572
Alignment:
Q  199 ttgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacatagcc 280  Q
    ||||||||||||||||||||||||||| ||| |  ||| ||||||| |||||||| |||||||||  ||| |||||||||||    
T  14924491 ttgttcctcaaaccattgacaactcctctaaattacatattatttgccttcaaatgcaaagaaaataactaaaaacatagcc 14924572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 77 - 153
Target Start/End: Original strand, 14924307 - 14924383
Alignment:
Q  77 ttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtcttg 153  Q
    ||||||||||||||||||| ||  | |||||||||||||||||| ||||||||| || | |||||| ||||||||||    
T  14924307 ttgtattgtcttcaaaaacattccatgaaccattgatcttcaattttcatatctctggttcttcatttgatgtcttg 14924383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 77 - 195
Target Start/End: Original strand, 9396496 - 9396612
Alignment:
Q  77 ttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtcttgatttttcgattaacatgatttcc 176  Q
    ||||||||||||||||||  || |||||| | |||||||||| ||||| | || ||||||||||| ||||||||||| |||  ||||| | ||||||||     
T  9396496 ttgtattgtcttcaaaaaatttctaagaatcgttgatcttcattcttcttgtccttgatccttcacgtgatgtcttgttttgccgattta-atgatttct 9396594  T
Q  177 cactacaaagcactcaaaa 195  Q
    ||||| |||| ||||||||    
T  9396595 cactaaaaag-actcaaaa 9396612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 101 - 175
Target Start/End: Original strand, 12972298 - 12972372
Alignment:
Q  101 aagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtcttgatttttcgattaacatgatttc 175  Q
    ||||||||||||||||||||||||||||| | |||| |||| || |||||||| ||||  |||| ||||||||||    
T  12972298 aagaaccattgatcttcaatcttcatatcatcgatctttcacgttatgtcttggttttctgatttacatgatttc 12972372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 53 - 175
Target Start/End: Original strand, 16387120 - 16387242
Alignment:
Q  53 aacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtctt 152  Q
    ||||||||| ||| ||||||||   | |||| |||| |||| ||||||||| ||||||| |||| || ||||||||| ||||||| |||  | |||||||    
T  16387120 aacttgaaacgaattttcttcatcctatattttcttaaaaatccttttaaggaccattggtctttaaacttcatatccttgatccctcacctaatgtctt 16387219  T
Q  153 gatttttcgattaacatgatttc 175  Q
    |||||  ||||| ||||||||||    
T  16387220 gatttgccgatttacatgatttc 16387242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 205 - 284
Target Start/End: Complemental strand, 16527925 - 16527852
Alignment:
Q  205 ctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacatagccaaaa 284  Q
    |||||||||  |||||||||| ||| ||||||||||||||||||      |||||||||||||| |||||||||||||||    
T  16527925 ctcaaaccaccgacaactcctctaactctcatcttatttgtctt------caaagaaaagtactaaaaacatagccaaaa 16527852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 77 - 141
Target Start/End: Original strand, 26512668 - 26512732
Alignment:
Q  77 ttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttca 141  Q
    ||||||||| |||| | |||||||||||||||||||||||||  ||||||||| ||||| |||||    
T  26512668 ttgtattgtgttcacagaccttttaagaaccattgatcttcatccttcatatccttgattcttca 26512732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 77 - 141
Target Start/End: Original strand, 26517784 - 26517848
Alignment:
Q  77 ttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttca 141  Q
    ||||||||| |||| | |||||||||||||||||||||||||  ||||||||| ||||| |||||    
T  26517784 ttgtattgtgttcacagaccttttaagaaccattgatcttcatccttcatatccttgattcttca 26517848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 277
Target Start/End: Original strand, 16387325 - 16387400
Alignment:
Q  202 ttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacata 277  Q
    |||||||||||||||||||||| | ||| |  ||||||||| |||||||||  ||||||||| |||| ||||||||    
T  16387325 ttcctcaaaccattgacaactcatctaaattacatcttattcgtcttcaaacacaaagaaaactactaaaaacata 16387400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 68 - 129
Target Start/End: Complemental strand, 24618117 - 24618056
Alignment:
Q  68 ttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatc 129  Q
    |||||||  |||||||||||| ||| | ||| |||||| |||||||||||||||||||||||    
T  24618117 ttcttcaacttgtattgtctttaaagatcttctaagaatcattgatcttcaatcttcatatc 24618056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 77 - 142
Target Start/End: Original strand, 32930334 - 32930399
Alignment:
Q  77 ttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcat 142  Q
    |||||||||||| |||||||||  ||||| ||||||| ||||  ||||||||||||||||| ||||    
T  32930334 ttgtattgtctttaaaaaccttccaagaatcattgattttcatccttcatatctttgatccctcat 32930399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 263
Target Start/End: Original strand, 32930547 - 32930610
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaa 263  Q
    |||||| ||||||||||||||||||| ||| |  ||||||||||| |||||||| |||| ||||    
T  32930547 tgttccgcaaaccattgacaactcctctaaatgacatcttatttgccttcaaatgcaaaaaaaa 32930610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 306
Target Start/End: Complemental strand, 15998549 - 15998444
Alignment:
Q  202 ttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaa-gtacttaaaacatagccaaaataacacatgatgttcc 300  Q
    ||||||||||||| ||  |||||| ||| |||||| | ||||  |||||||| ||||||||| ||||  ||||||||||||||||  || |||||| ||     
T  15998549 ttcctcaaaccatggaacactcctctaactctcatatcattttccttcaaatgcaaagaaaacgtacaaaaaacatagccaaaatgtcatatgatgatct 15998450  T
Q  301 gtcatc 306  Q
    ||||||    
T  15998449 gtcatc 15998444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 284
Target Start/End: Original strand, 12972471 - 12972543
Alignment:
Q  212 cattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacatagccaaaa 284  Q
    |||||||||||||| ||| |  | ||||| ||| |||||||| |||||||||  ||| |||||||||||||||    
T  12972471 cattgacaactcctctaaatgacctcttagttgccttcaaatgcaaagaaaataactaaaaacatagccaaaa 12972543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 280
Target Start/End: Original strand, 20495868 - 20495948
Alignment:
Q  200 tgttcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacatagcc 280  Q
    |||||||||||||||||| |||| || ||  |  | ||||| ||| |||||||| ||||||||| |||| |||||||||||    
T  20495868 tgttcctcaaaccattgataacttctctatatgacctcttaattgccttcaaatacaaagaaaattactaaaaacatagcc 20495948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 25 - 184
Target Start/End: Original strand, 5607 - 5765
Alignment:
Q  25 atcgttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttc 124  Q
    ||||||||||||| || |||||| ||| |||||||| |||| ||||||||||||||||| |||| ||| ||||| |||||||||||||  ||||||||||    
T  5607 atcgttcttccgtctgaaaactcctacaaacttgaattgaattttcttcactttgtattttctttaaagaccttctaagaaccattga-attcaatcttc 5705  T
Q  125 atatctttgatccttcatgtgatgtcttgatttttcgattaacatgatttcccactacaa 184  Q
    ||||| | |||||||||||||||||||| |||| || ||| |||||||||| ||||||||    
T  5706 atatcctcgatccttcatgtgatgtctttatttgtcaatttacatgatttctcactacaa 5765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 52 - 181
Target Start/End: Original strand, 228051 - 228179
Alignment:
Q  52 gaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtct 151  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||| |||||||| ||||||   | ||||||||| |||||||||    
T  228051 gaacttgaaatgaattttcttcactttgtattgtcttcaaataccttctaagaaccattg-tcttcaatattcatacactcgatccttcacgtgatgtct 228149  T
Q  152 tgatttttcgattaacatgatttcccacta 181  Q
    |||||| |||||| |||||||||| |||||    
T  228150 tgatttgtcgatttacatgatttctcacta 228179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 52 - 195
Target Start/End: Complemental strand, 12494 - 12352
Alignment:
Q  52 gaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtct 151  Q
    ||||||||||| || ||||||||||||||||| |||||| ||| ||| ||| |||||||| ||||| ||||||||||| |  |||||||| |||||||||    
T  12494 gaacttgaaataaattttcttcactttgtattttcttcataaaacttctaacaaccattg-tcttcgatcttcatatcgtcaatccttcacgtgatgtct 12396  T
Q  152 tgatttttcgattaacatgatttcccactacaaagcactcaaaa 195  Q
    |||||| |||||| |||||||||| ||||||||| |||||||||    
T  12395 tgatttgtcgatttacatgatttctcactacaaaacactcaaaa 12352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 25 - 157
Target Start/End: Original strand, 22451 - 22582
Alignment:
Q  25 atcgttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttc 124  Q
    ||||||||||| | |||||| || || |||||||||||||| ||||||||| |||||||||||| ||||||||| || |||||||||| ||||| |||||    
T  22451 atcgttcttccctctggaaaatcctaggaacttgaaatgaattttcttcaccttgtattgtcttaaaaaaccttctatgaaccattga-cttcattcttc 22549  T
Q  125 atatctttgatccttcatgtgatgtcttgattt 157  Q
    ||||| ||||| ||||| |||||||||||||||    
T  22550 atatccttgattcttcacgtgatgtcttgattt 22582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 52 - 195
Target Start/End: Complemental strand, 2058 - 1916
Alignment:
Q  52 gaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtct 151  Q
    ||||||||||| || ||||||||||||||||| |||||| ||| ||| ||| |||||||| ||||||||||||||||| |  |||||||| |||||||||    
T  2058 gaacttgaaataaattttcttcactttgtattttcttcataaaacttctaacaaccattg-tcttcaatcttcatatcgtcaatccttcacgtgatgtct 1960  T
Q  152 tgatttttcgattaacatgatttcccactacaaagcactcaaaa 195  Q
    |||||| | |||| ||| |||||| ||||||||| | |||||||    
T  1959 tgatttgttgatttacaggatttctcactacaaaactctcaaaa 1916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386 (Bit Score: 63; Significance: 2e-27; HSPs: 5)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 25 - 195
Target Start/End: Original strand, 8546 - 8716
Alignment:
Q  25 atcgttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttc 124  Q
    |||||||||||||||| ||| || || ||||| |||||||| || |||||  ||||||||||||||||||||||||||| |  |||  |||| || |||     
T  8546 atcgttcttccgtttgaaaattcctaggaactcgaaatgaatttccttcatcttgtattgtcttcaaaaaccttttaaggaatatttgtctttaaacttt 8645  T
Q  125 atatctttgatccttcatgtgatgtcttgatttttcgattaacatgatttcccactacaaagcactcaaaa 195  Q
    || || |||||||||||| | |||||||||||| |||||| |||||||| | ||||||||| || ||||||    
T  8646 atttccttgatccttcattttatgtcttgatttgtcgatttacatgattcctcactacaaaacattcaaaa 8716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 195
Target Start/End: Original strand, 13014 - 13078
Alignment:
Q  131 ttgatccttcatgtgatgtcttgatttttcgattaacatgatttcccactacaaagcactcaaaa 195  Q
    ||||||||||||||||||||||||||| |||||| |||||||| | ||||||||| |||||||||    
T  13014 ttgatccttcatgtgatgtcttgatttgtcgatttacatgattcctcactacaaaacactcaaaa 13078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 25 - 135
Target Start/End: Original strand, 11636 - 11746
Alignment:
Q  25 atcgttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttc 124  Q
    ||||||||||||| |||||| || || ||||| |||||||| |||| |||  ||| |||| ||||||||||||| ||||||| ||| || |||| ||||     
T  11636 atcgttcttccgtctggaaattcctaggaactcgaaatgaactttcgtcatcttgcattgacttcaaaaaccttctaagaactatttatattcattctta 11735  T
Q  125 atatctttgat 135  Q
    ||||| |||||    
T  11736 atatccttgat 11746  T

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Target: scaffold0386; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 307
Target Start/End: Original strand, 8787 - 8892
Alignment:
Q  203 tcctcaaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacatagcc-aaaataacacatgatgttccg 301  Q
    ||||| |||||||||||| |||| |||  |||||||||||| |||| ||||  ||| ||||||||| |||| ||| || |||||| || ||||||||||     
T  8787 tcctctaaccattgacaaatcctctaaccctcatcttatttttcttaaaatgaaaataaaagtactaaaaaaataaccaaaaatatcatatgatgttcca 8886  T
Q  302 tcatca 307  Q
    ||||||    
T  8887 tcatca 8892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 277
Target Start/End: Original strand, 13153 - 13223
Alignment:
Q  207 caaaccattgacaactcctataattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacata 277  Q
    ||||||||||| || |||| ||| |||||||||||||||||| | ||  ||| ||||||||| ||||||||    
T  13153 caaaccattgaaaaatcctctaactctcatcttatttgtcttaatatgaaaataaaagtactaaaaacata 13223  T

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Target: scaffold0190 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 54 - 175
Target Start/End: Original strand, 11564 - 11685
Alignment:
Q  54 acttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtcttg 153  Q
    |||||||||||| |||||||||||||||||||||||||| ||||| |||||| ||||||| ||||||||||| ||  |  |||||| |  ||||||||||    
T  11564 acttgaaatgaattttcttcactttgtattgtcttcaaataccttataagaatcattgatattcaatcttcaaattctcaatccttaacttgatgtcttg 11663  T
Q  154 atttttcgattaacatgatttc 175  Q
     ||| |||||| ||||||||||    
T  11664 ttttgtcgatttacatgatttc 11685  T

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Target: scaffold0362 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 7892 - 7799
Alignment:
Q  29 ttcttccgtttggaaactcatacgaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatct 122  Q
    ||||||||| || |||||| || |||||||||||||| |||||| |||||||| ||||||||| |||||| ||||||||||||  |||||||||    
T  7892 ttcttccgtctgaaaactcctaggaacttgaaatgaattttcttgactttgtactgtcttcaacaaccttctaagaaccattggccttcaatct 7799  T

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Target: scaffold0002 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 67 - 195
Target Start/End: Complemental strand, 447211 - 447084
Alignment:
Q  67 tttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttcaatcttcatatctttgatccttcatgtgatgtcttgatttttcgattaa 166  Q
    ||||||||||||||||||||||||  ||||| ||||||||  |||||||||||| ||   ||| |||||||||||  ||||||||||||||   |||| |    
T  447211 tttcttcactttgtattgtcttcagtaacctgttaagaacttttgatcttcaat-ttttcatccttgatccttcacatgatgtcttgatttaatgattta 447113  T
Q  167 catgatttcccactacaaagcactcaaaa 195  Q
    ||||||| | |||| |||| |||||||||    
T  447112 catgattcctcacttcaaaacactcaaaa 447084  T

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Target: scaffold0002; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 231 - 308
Target Start/End: Complemental strand, 447014 - 446936
Alignment:
Q  231 tctcatcttatttgtcttcaaatccaaa-gaaaagtacttaaaacatagccaaaataacacatgatgttccgtcatcaa 308  Q
    |||||||||||||||||||||||  ||| |||||||||| |||||||||| |||||| || |||||| || ||||||||    
T  447014 tctcatcttatttgtcttcaaatgtaaaggaaaagtactaaaaacatagcaaaaatatcatatgatgctctgtcatcaa 446936  T

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Target: scaffold1149 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold1149
Description:

Target: scaffold1149; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 52 - 111
Target Start/End: Complemental strand, 2037 - 1978
Alignment:
Q  52 gaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattg 111  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| | ||||||||||||    
T  2037 gaacttgaaatgaattttctttactttgtattgtcttcaaaaaccatataagaaccattg 1978  T

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Target: scaffold0185 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 118
Target Start/End: Complemental strand, 2750 - 2684
Alignment:
Q  52 gaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgatcttca 118  Q
    |||| ||||||||  |||||||||| |||||||||||||||   ||| |||||||||||||||||||    
T  2750 gaacatgaaatgagttttcttcactctgtattgtcttcaaatgtcttataagaaccattgatcttca 2684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 52 - 150
Target Start/End: Complemental strand, 58999 - 58898
Alignment:
Q  52 gaacttgaaatgaaatttcttcactttgtattgtcttcaaaaaccttttaagaaccattgat----cttcaatcttcatatctttgatccttcatgtgat 147  Q
    |||||| ||||||| |||||||| |||| |||||||||||| |  |||||||||||||  ||    |||||||||||||||  | |||||||||||||||    
T  58999 gaactttaaatgaa-tttcttcattttgcattgtcttcaaatatattttaagaaccatatattaaacttcaatcttcatattctcgatccttcatgtgat 58901  T
Q  148 gtc 150  Q
    |||    
T  58900 gtc 58898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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