View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4097_low_27 (Length: 253)

Name: NF4097_low_27
Description: NF4097
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4097_low_27
NF4097_low_27
[»] chr1 (50 HSPs)
chr1 (1-239)||(47295590-47295828)
chr1 (2-239)||(51370211-51370447)
chr1 (2-239)||(16010492-16010725)
chr1 (2-239)||(4362197-4362430)
chr1 (74-239)||(30562269-30562434)
chr1 (76-239)||(8424388-8424551)
chr1 (5-239)||(45339073-45339305)
chr1 (2-239)||(11751504-11751736)
chr1 (74-239)||(45377801-45377966)
chr1 (2-239)||(2759012-2759245)
chr1 (23-239)||(27089692-27089907)
chr1 (2-233)||(1825063-1825291)
chr1 (2-224)||(39737311-39737528)
chr1 (86-239)||(7287177-7287330)
chr1 (2-165)||(6136029-6136187)
chr1 (5-239)||(25412168-25412399)
chr1 (2-239)||(41157898-41158132)
chr1 (86-239)||(642647-642800)
chr1 (97-236)||(10157958-10158098)
chr1 (91-239)||(4441135-4441283)
chr1 (12-239)||(46998083-46998303)
chr1 (2-141)||(3022697-3022833)
chr1 (74-220)||(20953031-20953177)
chr1 (2-239)||(45756076-45756309)
chr1 (119-239)||(3839321-3839441)
chr1 (74-239)||(22863248-22863411)
chr1 (74-239)||(4402143-4402308)
chr1 (74-239)||(17391600-17391766)
chr1 (86-219)||(11862573-11862706)
chr1 (74-233)||(45621560-45621721)
chr1 (100-236)||(14346248-14346384)
chr1 (2-62)||(29639605-29639665)
chr1 (86-216)||(18379196-18379325)
chr1 (182-239)||(29639674-29639731)
chr1 (1-62)||(29987608-29987669)
chr1 (183-239)||(23757311-23757367)
chr1 (2-62)||(37696158-37696218)
chr1 (77-239)||(23981354-23981516)
chr1 (2-62)||(642533-642594)
chr1 (200-239)||(3022658-3022697)
chr1 (86-216)||(35718442-35718575)
chr1 (2-62)||(3839193-3839254)
chr1 (89-194)||(37696593-37696698)
chr1 (75-114)||(47646287-47646326)
chr1 (76-134)||(41463373-41463431)
chr1 (86-207)||(42323441-42323562)
chr1 (16-62)||(44078450-44078496)
chr1 (86-219)||(65142-65275)
chr1 (2-62)||(4441048-4441109)
chr1 (165-233)||(28397398-28397466)
[»] chr8 (41 HSPs)
chr8 (2-239)||(30469371-30469607)
chr8 (2-239)||(40691165-40691396)
chr8 (2-206)||(2510494-2510694)
chr8 (2-236)||(38995967-38996197)
chr8 (2-236)||(44601989-44602219)
chr8 (2-239)||(22738598-22738833)
chr8 (86-239)||(21019754-21019907)
chr8 (2-239)||(39139344-39139578)
chr8 (103-239)||(31587920-31588056)
chr8 (5-239)||(2062520-2062749)
chr8 (2-239)||(25107269-25107497)
chr8 (2-239)||(660772-661005)
chr8 (2-239)||(1222207-1222440)
chr8 (2-239)||(10811892-10812126)
chr8 (2-237)||(2374283-2374514)
chr8 (86-236)||(31955654-31955804)
chr8 (74-239)||(9617298-9617460)
chr8 (77-239)||(10710063-10710223)
chr8 (2-239)||(3457779-3458010)
chr8 (104-239)||(17006324-17006458)
chr8 (104-239)||(17570790-17570924)
chr8 (2-168)||(44652442-44652602)
chr8 (2-165)||(2620066-2620225)
chr8 (119-239)||(254853-254973)
chr8 (145-239)||(19972986-19973079)
chr8 (6-202)||(16997990-16998183)
chr8 (149-239)||(17988945-17989034)
chr8 (119-239)||(846683-846803)
chr8 (74-239)||(35458784-35458944)
chr8 (2-62)||(255088-255148)
chr8 (2-62)||(846508-846568)
chr8 (169-236)||(2621410-2621477)
chr8 (183-239)||(9552507-9552563)
chr8 (2-62)||(39628688-39628748)
chr8 (2-62)||(39638238-39638298)
chr8 (183-239)||(40554397-40554453)
chr8 (74-133)||(9552632-9552691)
chr8 (106-205)||(17949841-17949940)
chr8 (2-62)||(21019950-21020010)
chr8 (2-62)||(40554231-40554291)
chr8 (2-61)||(15727100-15727160)
[»] chr4 (39 HSPs)
chr4 (2-239)||(4576561-4576794)
chr4 (2-239)||(6892899-6893132)
chr4 (86-239)||(34510383-34510536)
chr4 (2-233)||(11432330-11432557)
chr4 (2-239)||(4435116-4435349)
chr4 (2-239)||(32519727-32519961)
chr4 (2-239)||(41819147-41819390)
chr4 (86-239)||(7912882-7913035)
chr4 (2-239)||(22319975-22320208)
chr4 (126-239)||(23620930-23621043)
chr4 (92-239)||(55957573-55957720)
chr4 (74-239)||(26660121-26660286)
chr4 (75-239)||(32526380-32526544)
chr4 (5-219)||(56092184-56092393)
chr4 (95-238)||(52973694-52973836)
chr4 (86-239)||(37244007-37244160)
chr4 (75-236)||(50153707-50153868)
chr4 (147-239)||(12154284-12154376)
chr4 (74-235)||(30920299-30920460)
chr4 (74-232)||(43024641-43024799)
chr4 (91-236)||(10183661-10183809)
chr4 (74-236)||(6828981-6829142)
chr4 (154-239)||(36105755-36105840)
chr4 (119-239)||(52264319-52264440)
chr4 (87-239)||(8956577-8956728)
chr4 (74-239)||(37665919-37666086)
chr4 (90-236)||(27292375-27292526)
chr4 (75-239)||(29145508-29145674)
chr4 (118-234)||(24014510-24014626)
chr4 (2-58)||(34514287-34514343)
chr4 (75-172)||(39722002-39722099)
chr4 (178-239)||(50528844-50528905)
chr4 (2-62)||(12154164-12154224)
chr4 (86-178)||(42894708-42894791)
chr4 (86-216)||(33051898-33052029)
chr4 (74-131)||(50528769-50528826)
chr4 (2-34)||(12080612-12080644)
chr4 (77-113)||(25592350-25592386)
chr4 (2-61)||(37243925-37243984)
[»] chr2 (24 HSPs)
chr2 (5-239)||(16054966-16055199)
chr2 (2-239)||(9730137-9730369)
chr2 (2-236)||(43898074-43898307)
chr2 (2-239)||(10057225-10057461)
chr2 (86-239)||(16735053-16735206)
chr2 (2-235)||(5442948-5443175)
chr2 (2-239)||(5880235-5880471)
chr2 (2-239)||(9716154-9716388)
chr2 (86-239)||(1845238-1845391)
chr2 (5-239)||(4816577-4816808)
chr2 (86-239)||(32700612-32700765)
chr2 (86-236)||(38556443-38556593)
chr2 (74-239)||(5712491-5712656)
chr2 (160-239)||(39848539-39848618)
chr2 (2-236)||(13559956-13560185)
chr2 (86-239)||(7598936-7599089)
chr2 (86-239)||(12677749-12677902)
chr2 (102-239)||(36758125-36758262)
chr2 (75-238)||(37259256-37259412)
chr2 (181-239)||(16202142-16202200)
chr2 (74-125)||(16202049-16202100)
chr2 (86-164)||(27023424-27023502)
chr2 (2-54)||(16735232-16735285)
chr2 (75-115)||(26714075-26714115)
[»] chr3 (24 HSPs)
chr3 (2-237)||(22990508-22990743)
chr3 (14-239)||(29563536-29563750)
chr3 (75-239)||(29697483-29697647)
chr3 (86-239)||(21523770-21523924)
chr3 (2-239)||(9503823-9504057)
chr3 (72-235)||(43464450-43464612)
chr3 (2-229)||(20601600-20601827)
chr3 (7-235)||(27048570-27048794)
chr3 (87-239)||(45613155-45613307)
chr3 (86-239)||(51880215-51880368)
chr3 (74-236)||(11836854-11837016)
chr3 (74-239)||(36159170-36159336)
chr3 (74-239)||(44890658-44890823)
chr3 (74-237)||(33458569-33458732)
chr3 (137-239)||(31132978-31133080)
chr3 (118-215)||(29719350-29719449)
chr3 (102-233)||(43946648-43946781)
chr3 (178-239)||(27483386-27483447)
chr3 (2-50)||(45613099-45613147)
chr3 (136-238)||(43242041-43242142)
chr3 (74-124)||(52426413-52426463)
chr3 (5-53)||(43464389-43464437)
chr3 (74-150)||(44045685-44045761)
chr3 (80-112)||(46351465-46351497)
[»] chr7 (32 HSPs)
chr7 (2-239)||(9479286-9479518)
chr7 (2-236)||(42672763-42672993)
chr7 (2-239)||(25685293-25685526)
chr7 (2-239)||(39727237-39727470)
chr7 (12-239)||(9271148-9271371)
chr7 (86-239)||(32555703-32555856)
chr7 (2-239)||(18330670-18330903)
chr7 (2-236)||(32420356-32420586)
chr7 (2-239)||(41015688-41015922)
chr7 (2-238)||(28031864-28032096)
chr7 (2-239)||(40727024-40727257)
chr7 (121-239)||(5034092-5034210)
chr7 (86-239)||(21144466-21144619)
chr7 (2-239)||(41937647-41937881)
chr7 (77-230)||(34653861-34654015)
chr7 (86-239)||(42766552-42766704)
chr7 (74-172)||(18793709-18793807)
chr7 (5-205)||(18879544-18879741)
chr7 (74-237)||(37155528-37155690)
chr7 (2-184)||(38175744-38175922)
chr7 (74-239)||(25072685-25072851)
chr7 (86-236)||(22165974-22166129)
chr7 (86-236)||(22224681-22224836)
chr7 (75-215)||(44736595-44736735)
chr7 (75-229)||(38566627-38566782)
chr7 (74-232)||(32684236-32684396)
chr7 (86-230)||(42808948-42809091)
chr7 (2-190)||(28248880-28249065)
chr7 (2-49)||(32555646-32555693)
chr7 (16-53)||(40303336-40303373)
chr7 (72-112)||(30225782-30225822)
chr7 (73-125)||(37034432-37034484)
[»] chr5 (46 HSPs)
chr5 (2-230)||(19297953-19298177)
chr5 (86-236)||(42108520-42108670)
chr5 (2-239)||(6391335-6391567)
chr5 (2-239)||(11422506-11422741)
chr5 (2-236)||(40201718-40201950)
chr5 (75-239)||(41386889-41387053)
chr5 (74-236)||(36439917-36440079)
chr5 (2-237)||(32906822-32907052)
chr5 (75-239)||(38876623-38876788)
chr5 (86-239)||(12580082-12580235)
chr5 (86-241)||(35319295-35319450)
chr5 (2-239)||(40514765-40515001)
chr5 (12-239)||(40417239-40417467)
chr5 (2-239)||(16885449-16885683)
chr5 (86-239)||(15530086-15530239)
chr5 (86-239)||(28207286-28207439)
chr5 (2-239)||(14830594-14830828)
chr5 (89-239)||(16844483-16844633)
chr5 (75-239)||(39981618-39981783)
chr5 (74-239)||(8570185-8570352)
chr5 (86-239)||(28022739-28022892)
chr5 (74-239)||(22859615-22859780)
chr5 (86-231)||(333700-333845)
chr5 (136-239)||(17742919-17743022)
chr5 (86-239)||(8689105-8689257)
chr5 (150-239)||(39963935-39964022)
chr5 (154-239)||(2823530-2823615)
chr5 (99-239)||(15577829-15577970)
chr5 (75-215)||(25606228-25606369)
chr5 (76-172)||(29571153-29571248)
chr5 (94-172)||(10623605-10623683)
chr5 (86-239)||(10918314-10918467)
chr5 (74-156)||(18988613-18988695)
chr5 (2-62)||(11873629-11873688)
chr5 (74-213)||(18731070-18731207)
chr5 (158-206)||(29571095-29571143)
chr5 (178-238)||(35412360-35412420)
chr5 (5-62)||(41873097-41873155)
chr5 (2-62)||(333887-333948)
chr5 (2-62)||(12579977-12580038)
chr5 (2-58)||(8570112-8570168)
chr5 (2-62)||(39964087-39964147)
chr5 (178-233)||(22658377-22658432)
chr5 (145-239)||(4385974-4386068)
chr5 (16-62)||(11789717-11789763)
chr5 (2-34)||(36440123-36440155)
[»] chr6 (20 HSPs)
chr6 (2-239)||(10667562-10667796)
chr6 (74-239)||(24556571-24556737)
chr6 (2-236)||(6248693-6248923)
chr6 (86-239)||(9952718-9952871)
chr6 (86-230)||(26244259-26244403)
chr6 (2-221)||(33248077-33248292)
chr6 (21-239)||(13640801-13641014)
chr6 (86-239)||(24073523-24073675)
chr6 (74-236)||(33614532-33614694)
chr6 (2-239)||(5331092-5331325)
chr6 (20-191)||(6228044-6228211)
chr6 (74-239)||(2803834-2804000)
chr6 (74-224)||(10265733-10265883)
chr6 (90-172)||(33011716-33011798)
chr6 (2-51)||(17225391-17225440)
chr6 (198-236)||(6228374-6228412)
chr6 (193-239)||(33011615-33011661)
chr6 (183-239)||(5167211-5167267)
chr6 (5-53)||(26244145-26244193)
chr6 (72-122)||(17225173-17225223)
[»] scaffold0330 (1 HSPs)
scaffold0330 (2-239)||(10845-11079)
[»] scaffold0036 (1 HSPs)
scaffold0036 (74-239)||(52979-53144)
[»] scaffold0003 (1 HSPs)
scaffold0003 (75-238)||(324879-325042)
[»] scaffold0373 (1 HSPs)
scaffold0373 (74-236)||(7278-7439)


Alignment Details
Target: chr1 (Bit Score: 199; Significance: 1e-108; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 47295590 - 47295828
Alignment:
Q  1 cttgaattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaannnnnnnncttcatatttaaacatattattataaacta 100  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  47295590 cttgaattaaaataaaaatttgttaactttttcaataattcaagcttattagtatacattaattttttttcttcatatttaaacatattattataaacta 47295689  T
Q  101 gaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtcta 200  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  47295690 gaattgaaatatgatcaaatatatagtcaaatttcttaaaaactcatgttgattatcaaaagagagtttaatataaatgatatattagttcgctagtcta 47295789  T
Q  201 tttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    |||||||||||||||||||||||||||||||||||||||    
T  47295790 tttaaacttagatcacattgcttatttaaagatgttcat 47295828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 2 - 239
Target Start/End: Complemental strand, 51370447 - 51370211
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaannnnnnnncttcatatttaaacatattattataaactag 101  Q
    ||||||||| ||| |||||| |||||||||||| ||||| |||||||||||||||||||||         | ||||||| ||  ||||||||||||||||    
T  51370447 ttgaattaaaatagaaatttcttaactttttcagtaatttaagcttattagtatacattaattttt----tgcatatttgaatgtattattataaactag 51370352  T
Q  102 aa---ttgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtc 198  Q
    ||   ||||||||||||  |||||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||| ||||| |||||    
T  51370351 aaaaattgaaatatgatacaatatatagttaaatttcttaaaaattcatgttgattatcaaaagagagtttaatctaattgatatatttgttcgttagtc 51370252  T
Q  199 tatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    || ||||||||||||||||||||||||||||| ||||||||    
T  51370251 tagttaaacttagatcacattgcttatttaaatatgttcat 51370211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 2 - 239
Target Start/End: Original strand, 16010492 - 16010725
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaannnnnnnncttcatatttaaacatattattataaactag 101  Q
    ||||||||| ||||||||  ||||| ||||||| ||||| ||||||||||||||| |||||         | |||||||| |  |||||||||||||||     
T  16010492 ttgaattaaaataaaaatgcgttaattttttcagtaatttaagcttattagtataaattaattttt----tgcatatttatatgtattattataaactat 16010587  T
Q  102 aattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctat 201  Q
    ||||||||||||||  |||||||||||||||||| ||||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  16010588 aattgaaatatgatacaatatatagtcaaatttcctaaaaactcatgttgattatcaaaagagagtttaatataattgatatattagttcgctagtctat 16010687  T
Q  202 ttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    ||| ||||| ||||||||| | ||||||||||||||||    
T  16010688 ttacacttaaatcacattgatgatttaaagatgttcat 16010725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 2 - 239
Target Start/End: Complemental strand, 4362430 - 4362197
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaannnnnnnncttcatatttaaacatattattataaactag 101  Q
    ||||||||| ||||||||||||||||||||| | ||||| |||||||| ||||||||||||         | ||||||||||  |||||||||||||||     
T  4362430 ttgaattaaaataaaaatttgttaactttttaagtaatttaagcttatcagtatacattaatgttt----tgcatatttaaatgtattattataaactaa 4362335  T
Q  102 aattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctat 201  Q
    ||||||||||||||  | |||||||||||||| | ||||||  ||| |||||||||||| ||||||||||| ||| | |||||||||| | |||||||||    
T  4362334 aattgaaatatgatacattatatagtcaaattccctaaaaactcatcttgattatcaaaggagagtttaatctaatttatatattagtccactagtctat 4362235  T
Q  202 ttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    ||||||||| ||||||||||||||||||| ||||||||    
T  4362234 ttaaacttaaatcacattgcttatttaaaaatgttcat 4362197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 74 - 239
Target Start/End: Complemental strand, 30562434 - 30562269
Alignment:
Q  74 catatttaaacatattattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaata 173  Q
    ||||||||||  |||||||||||| |||||||||||||||||  |||||||| ||||||| | ||||||  ||| ||||||||||||||| |||||||||    
T  30562434 catatttaaatgtattattataaattagaattgaaatatgatacaatatataatcaaattccctaaaaactcatcttgattatcaaaagatagtttaata 30562335  T
Q  174 taactgatatattagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    ||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  30562334 taattgatatattagtttgctagtctatttaaacttagatcacattgattatttaaagatgttcat 30562269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 76 - 239
Target Start/End: Original strand, 8424388 - 8424551
Alignment:
Q  76 tatttaaacatattattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatata 175  Q
    ||||||||  ||||||||||||||| ||||||||||||||  ||||||||||||||||  |||||||  |||||||||||||||||| ||||||||| ||    
T  8424388 tatttaaatgtattattataaactaaaattgaaatatgatacaatatatagtcaaattctttaaaaactcatgttgattatcaaaagtgagtttaatcta 8424487  T
Q  176 actgatatattagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    ||||||||||||||||| ||||||||||||| || |||||||||| ||||||||||||||||||    
T  8424488 actgatatattagttcgttagtctatttaaattttgatcacattgtttatttaaagatgttcat 8424551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 5 - 239
Target Start/End: Complemental strand, 45339305 - 45339073
Alignment:
Q  5 aattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaannnnnnnncttcatatttaaacatattattataaactagaat 104  Q
    |||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||         | |||||||||| |||||||||||||||| |||    
T  45339305 aattaaaataaaaatttgttaactttttcagtaatttaagcttattagtatacattaatttttt---tgcatatttaaatatattattataaactataat 45339209  T
Q  105 tgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattat--caaaagagagtttaatataactgatatattagttcgctagtctatt 202  Q
    |||||||||||  |||||||||| || | ||| |||| || || || |||||  ||||||||||| |||| ||| ||||||||||||| |||||||||||    
T  45339208 tgaaatatgatacaatatatagtaaattctctaaaaactc-atctttattatatcaaaagagagtataatctaattgatatattagtttgctagtctatt 45339110  T
Q  203 taaacttagatcacattgcttatttaaagatgttcat 239  Q
    ||||||||||||  |||||||||| ||||||||||||    
T  45339109 taaacttagatcgtattgcttattaaaagatgttcat 45339073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 2 - 239
Target Start/End: Original strand, 11751504 - 11751736
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaannnnnnnncttcatatttaaacatattattataaactag 101  Q
    |||| |||| ||| ||||||||||||||||||||||||| || |||||||||||| ||||          ||||||| |||   ||||||||||||||||    
T  11751504 ttgagttaaaatataaatttgttaactttttcaataatttaaacttattagtatatattagtttt-----ttcatatataattttattattataaactag 11751598  T
Q  102 aattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctat 201  Q
    || | |||||||||  ||||||||||||||||   |||||   |||||||||||||||||||||||||||| ||| |||| |||||||| ||| ||||||    
T  11751599 aaataaaatatgatacaatatatagtcaaattctctaaaacctcatgttgattatcaaaagagagtttaatctaattgatctattagtttgctggtctat 11751698  T
Q  202 ttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    ||||||||||||||||||| |||| |||||||||||||    
T  11751699 ttaaacttagatcacattgtttatgtaaagatgttcat 11751736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 74 - 239
Target Start/End: Complemental strand, 45377966 - 45377801
Alignment:
Q  74 catatttaaacatattattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaata 173  Q
    ||||||||||  |||||||| ||||||||||||| |||||||  | |||||||| ||||| | ||||||  ||||||||||||||||||||||||||||     
T  45377966 catatttaaatgtattattacaaactagaattgatatatgatacagtatatagttaaattccctaaaaactcatgttgattatcaaaagagagtttaatc 45377867  T
Q  174 taactgatatattagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    ||| ||||||||||||||||||||||||||| ||||||||||||||| | |||||||||| |||||    
T  45377866 taattgatatattagttcgctagtctatttacacttagatcacattgttgatttaaagatattcat 45377801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 2 - 239
Target Start/End: Complemental strand, 2759245 - 2759012
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaannnnnnnncttcatatttaaacatattattataaactag 101  Q
    ||||||||| |||||||| || ||||||||||| ||||| |||||||||| || |||||||         | ||||||||||| |||||||| |||||||    
T  2759245 ttgaattaaaataaaaatatgataactttttcagtaatttaagcttattaataaacattaattttttt--tgcatatttaaacgtattattacaaactag 2759148  T
Q  102 aattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctat 201  Q
    |||||  |||||||  ||||||  |||||||| | ||||||  |||| | ||||||||||||||||||||| ||| |||||||||||||||||| || ||    
T  2759147 aattgttatatgatacaatata--gtcaaattccctaaaaactcatggtaattatcaaaagagagtttaatctaattgatatattagttcgctaatcaat 2759050  T
Q  202 ttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    ||||||||||||||||||| ||||||||| ||||||||    
T  2759049 ttaaacttagatcacattgtttatttaaatatgttcat 2759012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 23 - 239
Target Start/End: Complemental strand, 27089907 - 27089692
Alignment:
Q  23 ttaactttttcaataattcaagcttattagtatacattaannnnnnnncttcatatttaaacatattattataaactagaattgaaatatgatcaaatat 122  Q
    |||||||||||| ||||| |||||||||||||||||||           | ||||||||||  ||||||||||||||| ||||||||||||||  |||||    
T  27089907 ttaactttttcagtaatttaagcttattagtatacatt----gcttttttacatatttaaatgtattattataaactaaaattgaaatatgatacaatat 27089812  T
Q  123 atagtcaaatt-tct--taaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctatttaaacttagatcacatt 219  Q
    ||| ||||||| |||   |||||  ||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||    
T  27089811 ataatcaaattctctaaaaaaaactcatcttgattatcaaaagagagtttaatctaattgatatattagttcgctagtctatctaaacttagatcacatt 27089712  T
Q  220 gcttatttaaagatgttcat 239  Q
    | ||||| |||||| |||||    
T  27089711 gtttattaaaagatattcat 27089692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 2 - 233
Target Start/End: Original strand, 1825063 - 1825291
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaannnnnnnncttcatatttaaacatattattataaactag 101  Q
    ||||||||| |||||| ||||||| | |||| | ||||| ||| |||||||||||||||||         |  |||||||||  ||||||||||||||||    
T  1825063 ttgaattaaaataaaattttgttaccctttttagtaatttaaggttattagtatacattaattttttacat--atatttaaatgtattattataaactag 1825160  T
Q  102 aattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctat 201  Q
    ||||||||||||||   ||||||||||||||||| ||||||| ||||||||||||||||| ||| |||||| |||  |||| |||||||||||| |||||    
T  1825161 aattgaaatatgatacgatatatagtcaaatttcctaaaaattcatgttgattatcaaaatagattttaatctaatagataaattagttcgctaatctat 1825260  T
Q  202 ttaaacttagatcacattgcttatttaaagat 233  Q
    ||||| || ||| |||||||||||| ||||||    
T  1825261 ttaaagtt-gattacattgcttattaaaagat 1825291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 2 - 224
Target Start/End: Complemental strand, 39737528 - 39737311
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaannnnnnnncttcatatttaaacatattattataaactag 101  Q
    ||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||| ||||         | |||||||||   |||||||||| ||||     
T  39737528 ttgaattaaaataaaaatttgttaactttttcagtaatttaagcttattagtatacgttaattttt----tccatatttaatg-tattattatatactat 39737434  T
Q  102 aattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctat 201  Q
    ||||||||||| ||  |||||||| |||||||   ||||||  ||| |||||||||||||||||||||||| ||| ||||||||| ||| | ||||||||    
T  39737433 aattgaaatattatataatatataatcaaattatctaaaaagtcatcttgattatcaaaagagagtttaatctaattgatatatttgtttgttagtctat 39737334  T
Q  202 ttaaacttagatcacattgctta 224  Q
    |||||||||||| ||||||||||    
T  39737333 ttaaacttagattacattgctta 39737311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 86 - 239
Target Start/End: Original strand, 7287177 - 7287330
Alignment:
Q  86 tattattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatat 185  Q
    ||||||||||||||||||| ||||||||||  |||||| |||| |||||  |||||   | |||||||||||||||||||||||||| ||| |||  |||    
T  7287177 tattattataaactagaatagaaatatgatacaatatacagtcgaattttctaaaacctcgtgttgattatcaaaagagagtttaatttaattgaactat 7287276  T
Q  186 tagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    ||||||  ||||| ||||||||||||||||||||||||||||||||||||||||    
T  7287277 tagttcattagtccatttaaacttagatcacattgcttatttaaagatgttcat 7287330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 2 - 165
Target Start/End: Complemental strand, 6136187 - 6136029
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaannnnnnnncttcatatttaaacatattattataaactag 101  Q
    ||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||||         | ||| |||||| | |||||||||||||||    
T  6136187 ttgaattaaaataaaaatttgttaactttt-caataatttaagcttattagtatacattaattttt----tgcatgtttaaatacattattataaactag 6136093  T
Q  102 aattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagaga 165  Q
    ||||||||||||||  |||||||||||||||||| ||||||  |||||||||||||||| ||||    
T  6136092 aattgaaatatgatacaatatatagtcaaatttcctaaaaactcatgttgattatcaaatgaga 6136029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 239
Target Start/End: Original strand, 25412168 - 25412399
Alignment:
Q  5 aattaacataaaaatttgttaactttttcaataattcaagctt-attagtatacattaannnnnnnncttcatatttaaacatattattataaactagaa 103  Q
    |||||| ||| |||||||| |||||||||||||||| |||||| |||||||||||||||         | ||||| ||||  ||||||||||||||||||    
T  25412168 aattaaaatataaatttgtaaactttttcaataatttaagctttattagtatacattaattttt----tgcatatataaatgtattattataaactagaa 25412263  T
Q  104 ttgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctattt 203  Q
    | ||||||||||  ||||||||||| |||| | |||||   | ||||||| ||  |||||||||||||| ||| |||  |||||||| | ||||| ||||    
T  25412264 tagaaatatgatacaatatatagtcgaattccctaaaacctcgtgttgatcatgtaaagagagtttaatttaattgaactattagtttgttagtccattt 25412363  T
Q  204 aaacttagatcacattgcttatttaaagatgttcat 239  Q
    ||| |||||||||||| |||||||||||||||||||    
T  25412364 aaatttagatcacattacttatttaaagatgttcat 25412399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 239
Target Start/End: Original strand, 41157898 - 41158132
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagctt-attagtatacattaannnnnnnncttcatatttaaacatattattataaacta 100  Q
    ||||||||| ||| |||||||| |||||||||||||||| |||||| |||||||||||||||         | ||||| ||||  |||||||||||||||    
T  41157898 ttgaattaaaatataaatttgtaaactttttcaataatttaagctttattagtatacattaattttt----tacatatataaatttattattataaacta 41157993  T
Q  101 gaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtcta 200  Q
    |||| || |||||||  ||||||||||| | || | |||||   | |||||||||||||| ||||||||||| ||| |||  ||| ||||| |||||| |    
T  41157994 gaatagacatatgatacaatatatagtcgagttccctaaaacctcgtgttgattatcaaatgagagtttaatctaattgaactataagttctctagtcca 41158093  T
Q  201 tttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    |||||||||||||| ||||| ||| || |||||||||||    
T  41158094 tttaaacttagatctcattggttacttgaagatgttcat 41158132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 86 - 239
Target Start/End: Original strand, 642647 - 642800
Alignment:
Q  86 tattattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatat 185  Q
    |||||||||||| |||||| ||||||||||  ||||||||||| ||||   |||||     |||||||||| ||||||||||||||| ||| |||  |||    
T  642647 tattattataaattagaatagaaatatgatgcaatatatagtcgaattcgctaaaaccttgtgttgattatgaaaagagagtttaatttaattgaactat 642746  T
Q  186 tagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    |||||| |||||| ||||||||||||||||||||||||||||| ||||||||||    
T  642747 tagttcactagtccatttaaacttagatcacattgcttatttagagatgttcat 642800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 97 - 236
Target Start/End: Original strand, 10157958 - 10158098
Alignment:
Q  97 actagaattgaaatatgatcaaatatatagtcaaa-tttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgcta 195  Q
    |||| ||||||||||||||  ||||||| || ||| |||| |||||   ||||||||||||||||| |||||||||| ||| |||  ||||||||  |||    
T  10157958 actaaaattgaaatatgatacaatatattgttaaaatttcctaaaacatcatgttgattatcaaaatagagtttaatttaattgaactattagtttacta 10158057  T
Q  196 gtctatttaaacttagatcacattgcttatttaaagatgtt 236  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  10158058 gtctatttaaacttagatcacattgcttatttaaagatgtt 10158098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 91 - 239
Target Start/End: Original strand, 4441135 - 4441283
Alignment:
Q  91 ttataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatcca-tgttgattatcaaaagagagtttaatataactgatatattagt 189  Q
    |||||||||| ||| ||||||||||  |||||||| || |||| | ||||| || | |||||||||||||||||||||||||| ||| |||  |||||||    
T  4441135 ttataaactataatagaaatatgatataatatatattcgaattccctaaaa-tctagtgttgattatcaaaagagagtttaatctaattgaattattagt 4441233  T
Q  190 tcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    || |||||| |||||||||||||||||||| | |||||||||||||||||    
T  4441234 tcactagtccatttaaacttagatcacatttcatatttaaagatgttcat 4441283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 12 - 239
Target Start/End: Complemental strand, 46998303 - 46998083
Alignment:
Q  12 ataaaaatttgttaactttttcaataattcaagcttattagtatacattaannnnnnnncttcatatttaaacatattattataaactagaattgaaata 111  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||          | ||||||||||  ||||||      ||||||||||||||    
T  46998303 ataaaaatttgttaactttttcaataatttaagcttattagtatacattattattt----tgcatatttaaatgtattat------ctagaattgaaata 46998214  T
Q  112 tgatcaaatatatagtcaaatt-tcttaaaaatcc--atgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctatttaaact 208  Q
    ||||  |||||||||| ||||| ||| |||||  |  || || ||||  ||||||||||||||| ||| | |||||||| || | | |||||||||||||    
T  46998213 tgatacaatatatagtaaaattctctaaaaaaaactcatatttattagtaaaagagagtttaatctaattaatatattaatttgttggtctatttaaact 46998114  T
Q  209 tagatcacattgcttatttaaagatgttcat 239  Q
    |||||||||||||||||| ||||||||||||    
T  46998113 tagatcacattgcttattaaaagatgttcat 46998083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 3022833 - 3022697
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaannnnnnnncttcatatttaaacatattattataaactag 101  Q
    ||||||||| |||||||||||||||| ||| |||||||| ||||||||| |||||||||||         | ||||||||||  ||||||||||||||||    
T  3022833 ttgaattaaaataaaaatttgttaacctttacaataatttaagcttatttgtatacattaatttttt---tgcatatttaaatgtattattataaactag 3022737  T
Q  102 aattgaaatatgatcaaatatatagtcaaatttcttaaaa 141  Q
    ||||||||||||||  |||||||||||||||| |||||||    
T  3022736 aattgaaatatgatacaatatatagtcaaattccttaaaa 3022697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 74 - 220
Target Start/End: Complemental strand, 20953177 - 20953031
Alignment:
Q  74 catatttaaacatattattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatc-catgttgattatcaaaagagagtttaat 172  Q
    ||||||||||  ||||||||||||||| ||||||||||||||   |||||||| |||||| ||  |||||| ||||| |||||||||||||||||| |||    
T  20953177 catatttaaatgtattattataaactataattgaaatatgatacgatatatagccaaatt-ctctaaaatctcatgtcgattatcaaaagagagttcaat 20953079  T
Q  173 ataactgatatattagttcgctagtctatttaaacttagatcacattg 220  Q
     ||| ||||||||||||  |||| |||||||||||||||| |||||||    
T  20953078 ctaattgatatattagtctgctaatctatttaaacttagaccacattg 20953031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 239
Target Start/End: Original strand, 45756076 - 45756309
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagctt-attagtatacattaannnnnnnncttcatatttaaacatattattataaacta 100  Q
    ||||||||| ||| |||||||| |||||||||||||||| |||||| |||||||||||||||         | ||| | ||||  | |||||||||||||    
T  45756076 ttgaattaaaatataaatttgtaaactttttcaataatttaagctttattagtatacattaattttt----tgcatctataaatgt-ttattataaacta 45756170  T
Q  101 gaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtcta 200  Q
     ||||||||||||||  | ||||||||  | || | |||||   | |||||||||||||||||||||||||| |||  ||  ||||| |||| ||||| |    
T  45756171 taattgaaatatgatacagtatatagttgatttccctaaaatctcgtgttgattatcaaaagagagtttaatctaatagaactattaattcgttagtcca 45756270  T
Q  201 tttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    ||||||||||||||||||||| |||||||| ||||||||    
T  45756271 tttaaacttagatcacattgcatatttaaatatgttcat 45756309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 239
Target Start/End: Original strand, 3839321 - 3839441
Alignment:
Q  119 atatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctatttaaacttagatcacat 218  Q
    |||||||||| |||||| |||||   |  ||||||||||||||| ||||||||| ||| |||  |||||||||| |||| | ||||||||||||||||||    
T  3839321 atatatagtcgaatttcctaaaacctcgcgttgattatcaaaagtgagtttaatctaattgaactattagttcgttagtttgtttaaacttagatcacat 3839420  T
Q  219 tgcttatttaaagatgttcat 239  Q
    |||||||||||||||||||||    
T  3839421 tgcttatttaaagatgttcat 3839441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 74 - 239
Target Start/End: Complemental strand, 22863411 - 22863248
Alignment:
Q  74 catatttaaacatattattataaactagaattgaaatatgatcaaatatatagtcaaatttct-taaaaatccatgttgattatcaaaagagagtttaat 172  Q
    ||||||||||  |||||||||||| |||||||||||||||||  ||||||||| |||| |||| ||||| | || ||| | |||| ||||||||||||||    
T  22863411 catatttaaatgtattattataaattagaattgaaatatgatataatatatag-caaagttctctaaaacttcaggttaaatatcgaaagagagtttaat 22863313  T
Q  173 ataactgatatattagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    || | |||| ||||||||||||  ||||||||| |||  ||  |||| |||||||||||||||||||    
T  22863312 atcattgatctattagttcgctgatctatttaaccttgtat--cattacttatttaaagatgttcat 22863248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 74 - 239
Target Start/End: Original strand, 4402143 - 4402308
Alignment:
Q  74 catatttaaacatattattataaactagaattgaaatatgatcaaatatatagtcaaatttct-taaaaatccatgttgattatcaaaagagagtttaat 172  Q
    ||||||||||  |||||||||||| |||||||||||||||||  |||||||||| ||| |||| |||||||||||||| | |||||||||||| || |||    
T  4402143 catatttaaatgtattattataaattagaattgaaatatgatataatatatagt-aaagttctctaaaaatccatgttaaatatcaaaagagaattcaat 4402241  T
Q  173 ataactgatatattagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
       | |||| |||||||| | |||| ||||||| ||||  ||||||| ||| |||||| ||||||||    
T  4402242 cacattgatttattagtttgttagtttatttaaccttatttcacattacttgtttaaaaatgttcat 4402308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 74 - 239
Target Start/End: Original strand, 17391600 - 17391766
Alignment:
Q  74 catatttaaacatattattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatc-catgttgattatcaaaagagagtttaat 172  Q
    ||||||||||  || ||||||||||||||| |  ||||||||  |||||||||| |  |||  |||||||  |||||||| ||||||||| |||||||||    
T  17391600 catatttaaatgtactattataaactagaactataatatgatataatatatagttacgttttctaaaaatttcatgttgaatatcaaaagtgagtttaat 17391699  T
Q  173 ataactgatatattagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
     | | | ||||||||||||| ||||| ||||||| | | |||||||| |||||||||||||||||||    
T  17391700 tttattcatatattagttcgttagtccatttaaattaatatcacattacttatttaaagatgttcat 17391766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 86 - 219
Target Start/End: Complemental strand, 11862706 - 11862573
Alignment:
Q  86 tattattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatat 185  Q
    |||||| ||||||||||||||||||||     |||||||||||||||||  || |||| |||||| | ||| ||||| ||| ||||||||| ||||||||    
T  11862706 tattatcataaactagaattgaaatatttcttaatatatagtcaaattttgtagaaattcatgttaaatatgaaaagggagattaatataattgatatat 11862607  T
Q  186 tagttcgctagtctatttaaacttagatcacatt 219  Q
    ||||| | ||||||||||||| ||| ||||||||    
T  11862606 tagtttgttagtctatttaaatttatatcacatt 11862573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 74 - 233
Target Start/End: Original strand, 45621560 - 45621721
Alignment:
Q  74 catatttaaacatattattataaactagaattgaaatatgatcaaatatatagtcaaatt-tct-taaaaatccatgttgattatcaaaagagagtttaa 171  Q
    ||||||||||  |||||||| |||||| |||||||||| ||||||||||||||| ||||| |||  |||||  |||||| | ||||||||| ||||||||    
T  45621560 catatttaaatgtattattacaaactataattgaaatacgatcaaatatatagtaaaattatctaaaaaaaatcatgttaactatcaaaagggagtttaa 45621659  T
Q  172 tataactgatatattagttcgctagtctatttaaacttagatcacattgcttatttaaagat 233  Q
    |   | | || |||| ||||||||||||||||||||| | |||||| | ||| |||||||||    
T  45621660 tcacattaatctattcgttcgctagtctatttaaactcatatcacactacttgtttaaagat 45621721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 100 - 236
Target Start/End: Original strand, 14346248 - 14346384
Alignment:
Q  100 agaattgaaatatgatcaaatatatagtcaaatttct-taaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtc 198  Q
    |||||| |||||||||  |||||||||| ||| |||| ||||| | |||||| | ||| ||| |||||||||| | || |||| |||||||| |||||||    
T  14346248 agaattcaaatatgatataatatatagt-aaagttctctaaaatttcatgttaaatattaaaggagagtttaacacaaatgatctattagtttgctagtc 14346346  T
Q  199 tatttaaacttagatcacattgcttatttaaagatgtt 236  Q
    |||||||  ||| |||||||| ||||||||||||||||    
T  14346347 tatttaactttaaatcacattacttatttaaagatgtt 14346384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 29639605 - 29639665
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaa 62  Q
    ||||||||| | ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  29639605 ttgaattaaaagaaaaatttgttaactttttcaataatctaagcttattagtatacattaa 29639665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 86 - 216
Target Start/End: Original strand, 18379196 - 18379325
Alignment:
Q  86 tattattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatat 185  Q
    |||||||| |||||| ||||||||||||||  ||||||||||||| ||   || ||||  ||||| | ||||||||| ||||||||||| | |||| |||    
T  18379196 tattatta-aaactataattgaaatatgatataatatatagtcaatttatctacaaattaatgttaaatatcaaaagggagtttaatatcaatgatctat 18379294  T
Q  186 tagttcgctagtctatttaaacttagatcac 216  Q
    || |||| ||||||||| ||| |||||||||    
T  18379295 taattcgatagtctattcaaaattagatcac 18379325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 29639674 - 29639731
Alignment:
Q  182 atattagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    |||||| |||||||||||||||||||||| ||||||||| |||||||||||| |||||    
T  29639674 atattaattcgctagtctatttaaacttatatcacattgtttatttaaagatattcat 29639731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 29987669 - 29987608
Alignment:
Q  1 cttgaattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaa 62  Q
    |||||||||| ||||||||||||||||||||||| ||||| ||||| |||| ||||||||||    
T  29987669 cttgaattaaaataaaaatttgttaactttttcagtaatttaagctaattattatacattaa 29987608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 183 - 239
Target Start/End: Original strand, 23757311 - 23757367
Alignment:
Q  183 tattagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    ||||||||||||||| |||||||||||||| ||||||  ||||||||||||||||||    
T  23757311 tattagttcgctagtttatttaaacttagaccacattcattatttaaagatgttcat 23757367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 37696158 - 37696218
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaa 62  Q
    |||||||| |||| ||||||||||||||||||| | ||| |||||||||||||||||||||    
T  37696158 ttgaattaccatataaatttgttaactttttcagttattgaagcttattagtatacattaa 37696218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 77 - 239
Target Start/End: Original strand, 23981354 - 23981516
Alignment:
Q  77 atttaaacatattattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataa 176  Q
    |||||||  ||||||| |||| || ||||||||||||||  |||||||||| | | |   ||||||| ||| || | ||||||| | ||||||||| | |    
T  23981354 atttaaatgtattattttaaattataattgaaatatgatataatatatagttatactctctaaaaattcattttaaatatcaaatgggagtttaatctca 23981453  T
Q  177 ctgatatattagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
     | || ||||||||  |||||||||||||| ||| |||||||| |||||||||| ||| ||||    
T  23981454 tttatttattagttgtctagtctatttaaatttatatcacattacttatttaaacatgatcat 23981516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 642533 - 642594
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagc-ttattagtatacattaa 62  Q
    ||||||||| ||| |||||||| |||||||||||||||| |||| |||||||||||||||||    
T  642533 ttgaattaaaatataaatttgtaaactttttcaataatttaagctttattagtatacattaa 642594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 3022697 - 3022658
Alignment:
Q  200 atttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  3022697 atttaaacttcgatcacattgcttatttaaagatgttcat 3022658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 86 - 216
Target Start/End: Complemental strand, 35718575 - 35718442
Alignment:
Q  86 tattattataaactagaattgaaatatgatcaa--atatatagtcaaatttcttaaaaatccatgttgattatcaaaaga-gagtttaatataactgata 182  Q
    |||||| |||||||||||||||||||||||  |  ||||||| |||||||   ||||||| | |||| | ||| |||| | ||||||||| | | |||||    
T  35718575 tattatgataaactagaattgaaatatgatatataatatataatcaaattctctaaaaattcttgttaaatataaaaaaacgagtttaatttcaatgata 35718476  T
Q  183 tattagttcgctagtctatttaaacttagatcac 216  Q
    |||||||||  ||||| ||| |||||||||||||    
T  35718475 tattagttcattagtcgattgaaacttagatcac 35718442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 3839193 - 3839254
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaag-cttattagtatacattaa 62  Q
    ||||||||| ||| |||||||| |||||||||||||||| |||  |||||||||||||||||    
T  3839193 ttgaattaaaatataaatttgtaaactttttcaataatttaagttttattagtatacattaa 3839254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 194
Target Start/End: Original strand, 37696593 - 37696698
Alignment:
Q  89 tattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattag 188  Q
    |||| |||||||||||| |||||||||  |||||||| |||||||   |||||   |||||||||||| |||| ||| |||||| ||| |||| ||||||    
T  37696593 tattttaaactagaattaaaatatgatacaatatataatcaaattctctaaaacctcatgttgattattaaaaaagactttaatctaattgatctattag 37696692  T
Q  189 ttcgct 194  Q
     |||||    
T  37696693 ctcgct 37696698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 114
Target Start/End: Complemental strand, 47646326 - 47646287
Alignment:
Q  75 atatttaaacatattattataaactagaattgaaatatga 114  Q
    ||||||||| |||||||||||||| |||||||||||||||    
T  47646326 atatttaaatatattattataaacgagaattgaaatatga 47646287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 134
Target Start/End: Complemental strand, 41463431 - 41463373
Alignment:
Q  76 tatttaaacatattattataaactagaattgaaatatgatcaaatatatagtcaaattt 134  Q
    ||||||||  |||||||||||||||||||| ||||||| |   ||||||||||||||||    
T  41463431 tatttaaatttattattataaactagaattaaaatatggtatcatatatagtcaaattt 41463373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 207
Target Start/End: Complemental strand, 42323562 - 42323441
Alignment:
Q  86 tattattataaactagaattgaaatatgatcaaatatatagtcaaatt-tcttaaaaatccatgttgattatcaaaagagagtttaatataactgatata 184  Q
    |||||||||||| ||||| ||||||| |||   |||||||||  |||| |||  |||||| ||||| | |||||||||||| |||||| | | |||| ||    
T  42323562 tattattataaattagaactgaaatacgatatcatatatagttgaattctctataaaatc-atgttaaatatcaaaagagaatttaatctcattgatcta 42323464  T
Q  185 ttagttcgctagtctatttaaac 207  Q
    |||||  ||||||||||||||||    
T  42323463 ttagtatgctagtctatttaaac 42323441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 62
Target Start/End: Original strand, 44078450 - 44078496
Alignment:
Q  16 aaatttgttaactttttcaataattcaagcttattagtatacattaa 62  Q
    ||||||||||||||||||| ||||| |||||||| ||| ||||||||    
T  44078450 aaatttgttaactttttcagtaatttaagcttataagtctacattaa 44078496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 86 - 219
Target Start/End: Complemental strand, 65275 - 65142
Alignment:
Q  86 tattattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatat 185  Q
    ||||||||||||||||||||| ||||| ||  |||| |||||||||||   ||||| | ||| || | ||| ||||  ||||||||| | | |||| |||    
T  65275 tattattataaactagaattgtaatataatataatagatagtcaaattctctaaaacttcattttaaatataaaaaatgagtttaattttaatgatctat 65176  T
Q  186 tagttcgctagtctatttaaacttagatcacatt 219  Q
    |  |||| || | ||||||||||||||| |||||    
T  65175 tgattcgttactatatttaaacttagattacatt 65142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 4441048 - 4441109
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaag-cttattagtatacattaa 62  Q
    ||||||||| ||| ||||| || |||||||||||||||| |||  |||||||||||||||||    
T  4441048 ttgaattaaaatataaattcgtaaactttttcaataatttaagttttattagtatacattaa 4441109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 233
Target Start/End: Complemental strand, 28397466 - 28397398
Alignment:
Q  165 agtttaatataactgatatattagttcgctagtctatttaaacttagatcacattgcttatttaaagat 233  Q
    |||||||| | | |||| ||| ||||||||| |||||||||||||| |  ||||| |||||||||||||    
T  28397466 agtttaatcttattgatctataagttcgctaatctatttaaacttatactacattacttatttaaagat 28397398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 138; Significance: 3e-72; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 2 - 239
Target Start/End: Complemental strand, 30469607 - 30469371
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaannnnnnnncttcatatttaaacatattattataaactag 101  Q
    ||||||||| ||||||||||||||| ||||| | ||||| ||||||||||||||||||||          ||||||||||||  ||||||||||||||||    
T  30469607 ttgaattaaaataaaaatttgttaa-tttttaagtaatttaagcttattagtatacattattttttttctttcatatttaaatgtattattataaactag 30469509  T
Q  102 aattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctat 201  Q
    ||||||||||||||  |||||||||||||||||| ||||||  |||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||    
T  30469508 aattgaaatatgatacaatatatagtcaaatttcctaaaaactcatgttgattatcaaaagagagtttaatgtaattgatatattagtttgctagtctat 30469409  T
Q  202 ttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    | ||||||||||||||||||||||||||||||||||||    
T  30469408 tcaaacttagatcacattgcttatttaaagatgttcat 30469371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 2 - 239
Target Start/End: Complemental strand, 40691396 - 40691165
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaannnnnnnncttcatatttaaacatattattataaactag 101  Q
    ||||||||| |||||||| |||||| | ||||| ||||| |||||||||||| ||||||||         | |||||||| |  ||||||||||||||||    
T  40691396 ttgaattaaaataaaaatatgttaattgtttcagtaatttaagcttattagtctacattaatattt----tgcatatttatatgtattattataaactag 40691301  T
Q  102 aattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctat 201  Q
    ||||||||| ||||  |||||||||||||| | | ||||| | ||||||||||||||||||||  |||||| ||| ||||||||||||||||||||||||    
T  40691300 aattgaaatctgatacaatatatagtcaaactccctaaaagttcatgttgattatcaaaagag--tttaatctaattgatatattagttcgctagtctat 40691203  T
Q  202 ttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    ||||||||||||||||||||||||||||||||||||||    
T  40691202 ttaaacttagatcacattgcttatttaaagatgttcat 40691165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 2 - 206
Target Start/End: Complemental strand, 2510694 - 2510494
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaannnnnnnncttcatatttaaacatattattataaactag 101  Q
    ||||||||| |||||||| |||||||||||||| ||||| |||||||||||||||||||||         | ||||||||||  ||||||||||||||||    
T  2510694 ttgaattaaaataaaaatgtgttaactttttcagtaatttaagcttattagtatacattaattttt----tgcatatttaaatgtattattataaactag 2510599  T
Q  102 aattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctat 201  Q
    ||||||||||||||  |||||||| ||||||||| ||||||  ||| |||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  2510598 aattgaaatatgatacaatatataatcaaatttcctaaaaactcatcttgattatcaaaagagagtttaatctaattgatatattagttcgctagtctat 2510499  T
Q  202 ttaaa 206  Q
    |||||    
T  2510498 ttaaa 2510494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 2 - 236
Target Start/End: Original strand, 38995967 - 38996197
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaannnnnnnncttcatatttaaacatattattataaactag 101  Q
    ||||||||| ||||||||||||||||||||||| || || |||||||||||||| ||||||         | ||||| ||||  ||||||||||||||||    
T  38995967 ttgaattaaaataaaaatttgttaactttttcagtattttaagcttattagtatgcattaattttt----tgcatatataaatgtattattataaactag 38996062  T
Q  102 aattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctat 201  Q
    |||||||||||| |  |||||||||| |||||   ||||||| ||||||||||||||||||| |||||||| ||| |||||||||||||| |||||||||    
T  38996063 aattgaaatatggtacaatatatagtaaaattctctaaaaattcatgttgattatcaaaagaaagtttaatctaattgatatattagttcactagtctat 38996162  T
Q  202 ttaaacttagatcacattgcttatttaaagatgtt 236  Q
    ||||||||| ||| ||||||||||||||| |||||    
T  38996163 ttaaacttacatcgcattgcttatttaaaaatgtt 38996197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 2 - 236
Target Start/End: Original strand, 44601989 - 44602219
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaannnnnnnncttcatatttaaacatattattataaactag 101  Q
    ||||||||| ||||||||||||||||||||||| || || |||||||||||||| ||||||         | ||||| ||||  ||||||||||||||||    
T  44601989 ttgaattaaaataaaaatttgttaactttttcagtattttaagcttattagtatgcattaattttt----tgcatatataaatgtattattataaactag 44602084  T
Q  102 aattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctat 201  Q
    |||||||||||| |  |||||||||| |||||   ||||||| ||||||||||||||||||| |||||||| ||| |||||||||||||| |||||||||    
T  44602085 aattgaaatatggtacaatatatagtaaaattctctaaaaattcatgttgattatcaaaagaaagtttaatctaattgatatattagttcactagtctat 44602184  T
Q  202 ttaaacttagatcacattgcttatttaaagatgtt 236  Q
    ||||||||| ||| ||||||||||||||| |||||    
T  44602185 ttaaacttacatcgcattgcttatttaaaaatgtt 44602219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 2 - 239
Target Start/End: Complemental strand, 22738833 - 22738598
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaannnnnnnncttcatatttaaacatattattataaactag 101  Q
    ||||||||| |||||||| || |||||| || | ||||| || ||||||||||||||||||         | ||||||||||  ||||||||||||||||    
T  22738833 ttgaattaaaataaaaatatggtaacttctttagtaatttaaacttattagtatacattaattttttt--tgcatatttaaatgtattattataaactag 22738736  T
Q  102 aattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctat 201  Q
    |||||||||||| |  |||||||||||||||||| ||||||   ||||||||| ||||||||||||||||| ||| | |||||||||||| |||||||||    
T  22738735 aattgaaatatggtataatatatagtcaaatttcctaaaaactaatgttgattgtcaaaagagagtttaatctaattaatatattagttcactagtctat 22738636  T
Q  202 ttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    |||||||||||||| ||| |||||||||||||||||||    
T  22738635 ttaaacttagatcatattccttatttaaagatgttcat 22738598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 86 - 239
Target Start/End: Complemental strand, 21019907 - 21019754
Alignment:
Q  86 tattattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatat 185  Q
    ||||||||||||||||||||||||||||||  || || | |||||||| | |||||   |||||||||||||||||||||||||||| ||| |||| |||    
T  21019907 tattattataaactagaattgaaatatgatacaaaattttgtcaaattccctaaaatctcatgttgattatcaaaagagagtttaatttaattgatctat 21019808  T
Q  186 tagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21019807 tagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 21019754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 2 - 239
Target Start/End: Complemental strand, 39139578 - 39139344
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaannnnnnnncttcatatttaaacatattattataaactag 101  Q
    ||||||||| |||||||| || ||||| ||||| ||||| ||| |||||||| ||||||||         | |||||||| |  ||||||||||||||||    
T  39139578 ttgaattaaaataaaaatatgctaactgtttcagtaatttaagtttattagtctacattaatttttt---tgcatatttatatttattattataaactag 39139482  T
Q  102 aattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctat 201  Q
    ||||||||| ||||  |||||||||||||||| | |||||||   |||||||||||||||||||| ||||| ||| ||||||||||||||||| ||||||    
T  39139481 aattgaaatctgatacaatatatagtcaaattccctaaaaattagtgttgattatcaaaagagagattaatctaattgatatattagttcgctggtctat 39139382  T
Q  202 ttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    |||||||||||||||||| ||||||||||| |||||||    
T  39139381 ttaaacttagatcacattacttatttaaaggtgttcat 39139344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 103 - 239
Target Start/End: Original strand, 31587920 - 31588056
Alignment:
Q  103 attgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctatt 202  Q
    |||||||| ||||  |||||||||||||||||| ||||||| |||||||||||||||||||||||||||| | | | |||||||||||||||||||||||    
T  31587920 attgaaatttgatacaatatatagtcaaatttcctaaaaattcatgttgattatcaaaagagagtttaatcttattaatatattagttcgctagtctatt 31588019  T
Q  203 taaacttagatcacattgcttatttaaagatgttcat 239  Q
    |||||||||||||||||||||||||||||||||||||    
T  31588020 taaacttagatcacattgcttatttaaagatgttcat 31588056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 5 - 239
Target Start/End: Original strand, 2062520 - 2062749
Alignment:
Q  5 aattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaannnnnnnncttcatatttaaacatattattataaactagaat 104  Q
    |||||| ||||||||||||||| |||  || ||||| |||||||||||||||||||||         | ||||||||||  || ||||| |||||| |||    
T  2062520 aattaaaataaaaatttgttaaattta-cagtaatttaagcttattagtatacattaattttt----tgcatatttaaatgtactattacaaactataat 2062614  T
Q  105 tgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctattta 204  Q
    |||||||||||  ||||||||||||||||  |||||||  |||||||||||| ||||||||||||||| ||| |||| |||||  |||||||||||||||    
T  2062615 tgaaatatgatacaatatatagtcaaattctttaaaaactcatgttgattatgaaaagagagtttaatctaattgatctattaaatcgctagtctattta 2062714  T
Q  205 aacttagatcacattgcttatttaaagatgttcat 239  Q
    ||||| |||||||||||||||||||||||||||||    
T  2062715 aacttcgatcacattgcttatttaaagatgttcat 2062749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 2 - 239
Target Start/End: Original strand, 25107269 - 25107497
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaannnnnnnncttcatatttaaacatattattataaactag 101  Q
    ||||||||  ||||||||||||| ||||||||| ||||| ||| |||||||||||||||||         | ||||||||||  ||||||||||||||||    
T  25107269 ttgaattaggataaaaatttgttgactttttcagtaatttaagtttattagtatacattaattttt----tgcatatttaaatgtattattataaactag 25107364  T
Q  102 aattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctat 201  Q
    ||| ||||||||||  |||| ||||| |||||   ||||||| ||||||||||||| ||||||||||| ||     ||||||||||||||||||| ||||    
T  25107365 aatagaaatatgatacaatacatagttaaattctctaaaaattcatgttgattatcgaaagagagtttgat-----tgatatattagttcgctagcctat 25107459  T
Q  202 ttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    |||||||||||| |||||||||||||||||||||||||    
T  25107460 ttaaacttagattacattgcttatttaaagatgttcat 25107497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 2 - 239
Target Start/End: Original strand, 660772 - 661005
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaannnnnnnncttcatatttaaacatattattataaactag 101  Q
    ||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||           ||||| ||||  |||||||||||||||     
T  660772 ttgaattaatatatagatttgttaactttttcaataatttaagcttattagtatacattaatttttcg----catatataaatgtattattataaactat 660867  T
Q  102 aattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctat 201  Q
    || |||||||||||  ||||||||||||||||   ||||||  |||||||||||||||| || || ||||| ||| |||  | ||||||||||||||| |    
T  660868 aactgaaatatgatacaatatatagtcaaattatgtaaaaactcatgttgattatcaaatgataggttaatctaattgacctgttagttcgctagtcttt 660967  T
Q  202 ttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    ||||||||| ||||||||| ||||||||||||||||||    
T  660968 ttaaacttatatcacattgtttatttaaagatgttcat 661005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 2 - 239
Target Start/End: Original strand, 1222207 - 1222440
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaannnnnnnncttcatatttaaacatattattataaactag 101  Q
    ||||||||| ||||||||||| ||||||||||| ||||| |||||||||| || | |||||         | ||||||||||| |||||||| || |||     
T  1222207 ttgaattaaaataaaaatttgataactttttcagtaatttaagcttattactacaaattaattttt----tgcatatttaaacgtattattacaacctac 1222302  T
Q  102 aattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctat 201  Q
    |||||  |||||||  ||||||||||||||||   ||||||  | || | |||||||||| |||||||||| ||| ||||||||| ||||||||||||||    
T  1222303 aattgttatatgatacaatatatagtcaaattctctaaaaactcgtgctaattatcaaaatagagtttaatctaattgatatattggttcgctagtctat 1222402  T
Q  202 ttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    |||||||||||||||||||||||||||||||| |||||    
T  1222403 ttaaacttagatcacattgcttatttaaagattttcat 1222440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 2 - 239
Target Start/End: Complemental strand, 10812126 - 10811892
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagctt-attagtatacattaannnnnnnncttcatatttaaacatattattataaacta 100  Q
    ||||||||| ||| |||||||| |||||||||||||||| |||||| |||||||||||||||         | ||||| ||||  |||||||||||||||    
T  10812126 ttgaattaaaatataaatttgtaaactttttcaataatttaagctttattagtatacattaattttt----tgcatatataaatgtattattataaacta 10812031  T
Q  101 gaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtcta 200  Q
    |||| |||||| |||  ||||||||||  |||| | |||||   | ||| |||||||||||||||||||||| ||| |||   ||||||||| ||||| |    
T  10812030 gaatagaaataagatacaatatatagttgaattccctaaaacatcgtgtagattatcaaaagagagtttaatctaattgaaccattagttcgttagtcca 10811931  T
Q  201 tttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  10811930 tttaaacttagatcacattgcttatttaaagttgttcat 10811892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 2 - 237
Target Start/End: Complemental strand, 2374514 - 2374283
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagctt-attagtatacattaannnnnnnncttcatatttaaacatattattataaacta 100  Q
    ||||||||| ||| |||||||| |||||||||||||||| |||||| ||||||||| || |          | ||||| ||||  |||||||||||||||    
T  2374514 ttgaattaaaatataaatttgtaaactttttcaataatttaagctttattagtatatataattttt-----tgcatatataaatgtattattataaacta 2374420  T
Q  101 gaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtcta 200  Q
    |||| ||||||||||  ||||||||||| |||| | |||||     |||||||||||||||||||||||| | ||| ||| ||||||||| ||||||| |    
T  2374419 gaatagaaatatgatacaatatatagtcgaattccctaaaaccttgtgttgattatcaaaagagagtttattctaattgaaatattagtttgctagtcca 2374320  T
Q  201 tttaaacttagatcacattgcttatttaaagatgttc 237  Q
    |||||||||||||||||||||||||||||| ||||||    
T  2374319 tttaaacttagatcacattgcttatttaaatatgttc 2374283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 86 - 236
Target Start/End: Original strand, 31955654 - 31955804
Alignment:
Q  86 tattattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatat 185  Q
    |||||||||||||||||||| |||||||||  |||||| | ||||| | | ||||||  |||||| |||||| |||||||||||||| |||  |||||||    
T  31955654 tattattataaactagaattcaaatatgatacaatatacaatcaaactccctaaaaactcatgttaattatcgaaagagagtttaatctaatcgatatat 31955753  T
Q  186 tagttcgctagtctatttaaacttagatcacattgcttatttaaagatgtt 236  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||| |||||    
T  31955754 tagttcgttagtctatttaaacttagatcgcattgcttatttaaaaatgtt 31955804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 74 - 239
Target Start/End: Complemental strand, 9617460 - 9617298
Alignment:
Q  74 catatttaaacatattattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaata 173  Q
    ||||||||||  |||||||||||||||   || ||||||| |  ||||||||||||| || | ||||||  ||||||||||||||||||||||||||||     
T  9617460 catatttaaatgtattattataaacta---tttaaatatggtataatatatagtcaacttccctaaaaactcatgttgattatcaaaagagagtttaatt 9617364  T
Q  174 taactgatatattagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    ||| ||||||||||||||| || ||||||| || |||||| |||||||||||||||| ||||||||    
T  9617363 taattgatatattagttcgttaatctatttgaatttagattacattgcttatttaaatatgttcat 9617298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 77 - 239
Target Start/End: Original strand, 10710063 - 10710223
Alignment:
Q  77 atttaaacatattattataaactagaattgaaatatgatcaaatatatagtcaaatt-tcttaaaaatccatgttgattatcaaaagagagtttaatata 175  Q
    |||||||  |||||||||||||||||||| |||||||||  | |||||||| ||||| ||| ||||||| || ||||||||||||| |||||||||| ||    
T  10710063 atttaaatgtattattataaactagaattaaaatatgat--actatatagttaaattctctaaaaaatc-atcttgattatcaaaatagagtttaattta 10710159  T
Q  176 actgatatattagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    | ||||||||||||| ||||||||| |||||| |||| ||||||||||||| ||| ||||||||    
T  10710160 attgatatattagtttgctagtctacttaaacatagagcacattgcttattaaaatatgttcat 10710223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 2 - 239
Target Start/End: Original strand, 3457779 - 3458010
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagctt-attagtatacattaannnnnnnncttcatatttaaacatattattataaacta 100  Q
    ||||||||| ||| |||||||| |||||||||||||||| |||||| ||| |||||| ||||         | ||||| ||||  |||||||||||||||    
T  3457779 ttgaattaaaatataaatttgtaaactttttcaataatttaagctttattggtatacgttaattttt----tgcatatataaatgtattattataaacta 3457874  T
Q  101 gaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtcta 200  Q
    |||| ||||||||||  ||||||||||| |||| | |||||   | ||||   ||||||||||||||||||| ||| |||  ||||||||| ||| || |    
T  3457875 gaatagaaatatgatacaatatatagtcgaattccctaaaacctcgtgtt---tatcaaaagagagtttaatctaattgaactattagttcactaatcca 3457971  T
Q  201 tttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    |||||||||| ||||||||||||| ||||||||||||||    
T  3457972 tttaaacttaaatcacattgcttacttaaagatgttcat 3458010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 104 - 239
Target Start/End: Complemental strand, 17006458 - 17006324
Alignment:
Q  104 ttgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctattt 203  Q
    ||||||||||||  |||||||||||||||| | ||||||   |||||||||||||||||||||||||||  || |||| |||||||| ||| ||||||||    
T  17006458 ttgaaatatgatacaatatatagtcaaattccctaaaaacttatgttgattatcaaaagagagtttaattaaattgat-tattagttggctggtctattt 17006360  T
Q  204 aaacttagatcacattgcttatttaaagatgttcat 239  Q
    |||||||||||| |||| ||| ||||||||||||||    
T  17006359 aaacttagatcatattgtttacttaaagatgttcat 17006324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 104 - 239
Target Start/End: Original strand, 17570790 - 17570924
Alignment:
Q  104 ttgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctattt 203  Q
    ||||||||||||  |||||||||||||||| | ||||||   |||||||||||||||||||||||||||  || |||| |||||||| ||| ||||||||    
T  17570790 ttgaaatatgatacaatatatagtcaaattccctaaaaacttatgttgattatcaaaagagagtttaattaaattgat-tattagttggctggtctattt 17570888  T
Q  204 aaacttagatcacattgcttatttaaagatgttcat 239  Q
    |||||||||||| |||| ||| ||||||||||||||    
T  17570889 aaacttagatcatattgtttacttaaagatgttcat 17570924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 168
Target Start/End: Original strand, 44652442 - 44652602
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaannnnnnnncttcatatttaaacatattattataaactag 101  Q
    ||||||||| |||||||||||||||||||| |||||||| || ||||||||||| ||||||         | ||||||||||   |||||||||||||||    
T  44652442 ttgaattaaaataaaaatttgttaactttt-caataatttaaacttattagtatgcattaatcttt----tgcatatttaaatgcattattataaactag 44652536  T
Q  102 aattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtt 168  Q
    ||||||||||||||  |||||||||| ||| ||| ||||||  ||||||||||||||||||||||||    
T  44652537 aattgaaatatgatacaatatatagttaaa-ttcctaaaaactcatgttgattatcaaaagagagtt 44652602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 2620066 - 2620225
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaannnnnnnncttcatatttaaacatattattataaactag 101  Q
    ||||||||| |||||| |||||||| ||||||| ||||| ||||||||||||||||||| |         | ||||||||||  ||||||||||||||||    
T  2620066 ttgaattaaaataaaattttgttaaatttttcagtaatttaagcttattagtatacatttattttt----tgcatatttaaatgtattattataaactag 2620161  T
Q  102 aattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagaga 165  Q
    ||||||||||||||  |||| |||||| |||| | ||||||   ||||||||||||||||||||    
T  2620162 aattgaaatatgatacaataaatagtccaattccctaaaaacttatgttgattatcaaaagaga 2620225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 119 - 239
Target Start/End: Complemental strand, 254973 - 254853
Alignment:
Q  119 atatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctatttaaacttagatcacat 218  Q
    |||||||||||||||   ||||||  |||||||||||||||| || || ||||| ||| |||  | ||||||||||||||| |||||||||| |||||||    
T  254973 atatatagtcaaattatgtaaaaactcatgttgattatcaaatgataggttaatctaattgacctgttagttcgctagtctttttaaacttatatcacat 254874  T
Q  219 tgcttatttaaagatgttcat 239  Q
    || ||||||||||||||||||    
T  254873 tgtttatttaaagatgttcat 254853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 145 - 239
Target Start/End: Original strand, 19972986 - 19973079
Alignment:
Q  145 catgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    |||||||||||||| |||||||||| || ||  |||| |||||| || ||||||||||||| |||||||||||||||||||||||||||||||||    
T  19972986 catgttgattatcacaagagagtttcatttatttgatctattagctccctagtctatttaa-cttagatcacattgcttatttaaagatgttcat 19973079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 6 - 202
Target Start/End: Complemental strand, 16998183 - 16997990
Alignment:
Q  6 attaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaannnnnnnncttcatatttaaaca-tattattataaactagaat 104  Q
    ||||| |||||||  |||||||||||||| ||||| ||| ||||||||||| |||||         | ||||||||||   ||||||||||||||| ||     
T  16998183 attaaaataaaaacgtgttaactttttcagtaatttaagtttattagtataaattaattttt----tgcatatttaaatggtattattataaactataac 16998088  T
Q  105 tgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctatt 202  Q
    | | |||||||  |||||||||||||||| | ||||||  |||||||||||||||||||||||||||| ||| | | |||| |||| |||||||||||    
T  16998087 ttatatatgatacaatatatagtcaaattccctaaaaactcatgttgattatcaaaagagagtttaatctaatttacatataagtttgctagtctatt 16997990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 149 - 239
Target Start/End: Original strand, 17988945 - 17989034
Alignment:
Q  149 ttgattatcaaaagagagtttaatataactgatatattagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    |||||||||||| | || |||||| ||| ||||||||||||||  ||||||||||||||||| || |||||||||||||||||||||||||    
T  17988945 ttgattatcaaa-gtgaatttaatctaattgatatattagttccttagtctatttaaacttaaattacattgcttatttaaagatgttcat 17989034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 119 - 239
Target Start/End: Original strand, 846683 - 846803
Alignment:
Q  119 atatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctatttaaacttagatcacat 218  Q
    |||||||||||||||   ||||||  |||||||||||||||| || || ||||| ||| |||  | | ||||||||||||| |||||||||| |||||||    
T  846683 atatatagtcaaattatgtaaaaactcatgttgattatcaaatgataggttaatctaattgacctgtgagttcgctagtctttttaaacttatatcacat 846782  T
Q  219 tgcttatttaaagatgttcat 239  Q
    ||  |||||||||||||||||    
T  846783 tgtgtatttaaagatgttcat 846803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 74 - 239
Target Start/End: Complemental strand, 35458944 - 35458784
Alignment:
Q  74 catatttaaacatattattataaactagaattgaaatatgatcaaatatatagtcaaatttct-taaaaatccatgttgattatcaaaagagagtttaat 172  Q
    ||||||||||  |||||||||||| |||||||||||||||||     ||| ||| ||| |||| ||||| | |||||| | |||| || |||||||||||    
T  35458944 catatttaaatgtattattataaattagaattgaaatatgat-----ataaagt-aaacttctctaaaatttcatgttaaatatcgaatgagagtttaat 35458851  T
Q  173 ataactgatatattagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    || | |||| |||||| ||||||||||||||||  || ||||||||| |||||||||| | ||||||    
T  35458850 atcattgatctattagctcgctagtctatttaactttggatcacattacttatttaaaaacgttcat 35458784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 255148 - 255088
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaa 62  Q
    ||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||    
T  255148 ttgaattaatatatagatttgttaactttttcaataatttaagcttattagtatacattaa 255088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 846508 - 846568
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaa 62  Q
    ||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||    
T  846508 ttgaattaatatatagatttgttaactttttcaataatttaagcttattagtatacattaa 846568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 169 - 236
Target Start/End: Original strand, 2621410 - 2621477
Alignment:
Q  169 taatataactgatatattagttcgctagtctatttaaacttagatcacattgcttatttaaagatgtt 236  Q
    |||| ||| ||||||||||||||| ||| |||||||||||||||||| |||||||||||||| |||||    
T  2621410 taatctaattgatatattagttcgttagactatttaaacttagatcatattgcttatttaaatatgtt 2621477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 183 - 239
Target Start/End: Complemental strand, 9552563 - 9552507
Alignment:
Q  183 tattagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    |||||||||| |||| |||||||||||||||||||||| ||||||||| ||||||||    
T  9552563 tattagttcgttagtttatttaaacttagatcacattgtttatttaaatatgttcat 9552507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 39628688 - 39628748
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaa 62  Q
    ||||||||| ||| |||||||||| |||||||||| ||| |||||||||||||||||||||    
T  39628688 ttgaattaaaatataaatttgttagctttttcaatcatttaagcttattagtatacattaa 39628748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 39638238 - 39638298
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaa 62  Q
    ||||||||| ||| |||||||||| |||||||||| ||| |||||||||||||||||||||    
T  39638238 ttgaattaaaatataaatttgttagctttttcaatcatttaagcttattagtatacattaa 39638298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 183 - 239
Target Start/End: Original strand, 40554397 - 40554453
Alignment:
Q  183 tattagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    ||||| |||| |||||||||||||||||||||||||| ||| |||||||||||||||    
T  40554397 tattaattcgttagtctatttaaacttagatcacattacttttttaaagatgttcat 40554453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 133
Target Start/End: Complemental strand, 9552691 - 9552632
Alignment:
Q  74 catatttaaacatattattataaactagaattgaaatatgatcaaatatatagtcaaatt 133  Q
    ||||||||||  ||||||||||||||| ||||||| ||||||  ||||||||||||||||    
T  9552691 catatttaaatgtattattataaactaaaattgaattatgatataatatatagtcaaatt 9552632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 205
Target Start/End: Complemental strand, 17949940 - 17949841
Alignment:
Q  106 gaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctatttaa 205  Q
    ||||||||||  | |||||||| ||||| | ||||||  | | ||||||||||||||| |||||||| ||| |||| |||||||||||||  ||||||||    
T  17949940 gaaatatgatacagtatatagtaaaattccgtaaaaactcgtattgattatcaaaagatagtttaatctaattgatctattagttcgctatactatttaa 17949841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 21020010 - 21019950
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaa 62  Q
    ||||||||| | | ||||||||||||||||| | ||||| |||||||||| ||||||||||    
T  21020010 ttgaattaaaaaataaatttgttaacttttttagtaatttaagcttattaatatacattaa 21019950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 40554231 - 40554291
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaa 62  Q
    |||||||||  || ||||||||||||||||| | ||||| ||| |||||||||||||||||    
T  40554231 ttgaattaaattataaatttgttaactttttgagtaatttaagtttattagtatacattaa 40554291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 15727100 - 15727160
Alignment:
Q  2 ttgaattaacataaaaatttgttaac-tttttcaataattcaagcttattagtatacatta 61  Q
    |||||||||  || ||||||||| || ||||||||||||| || |||||||||||||||||    
T  15727100 ttgaattaaattataaatttgttcacatttttcaataatttaaacttattagtatacatta 15727160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 130; Significance: 2e-67; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 2 - 239
Target Start/End: Original strand, 4576561 - 4576794
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaannnnnnnncttcatatttaaacatattattataaactag 101  Q
    ||||||||| ||||||||||||||||||||| | ||||| ||||||||||||||| |||||         | ||||||||||  ||||||||||||||||    
T  4576561 ttgaattaaaataaaaatttgttaacttttttagtaatttaagcttattagtatatattaattttt----tgcatatttaaatttattattataaactag 4576656  T
Q  102 aattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctat 201  Q
    ||||||||||||||  |||||||||||||||||| ||||||  |||||||||||||||||| ||||| ||| ||| ||||||||||||||| ||||||||    
T  4576657 aattgaaatatgatataatatatagtcaaatttcctaaaaactcatgttgattatcaaaagggagttgaatctaattgatatattagttcgttagtctat 4576756  T
Q  202 ttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    |||||||||||||||||||||||||||||||| |||||    
T  4576757 ttaaacttagatcacattgcttatttaaagattttcat 4576794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 2 - 239
Target Start/End: Original strand, 6892899 - 6893132
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaannnnnnnncttcatatttaaacatattattataaactag 101  Q
    |||||| || ||||||| ||||||||||||||||||||| |||||||||||||||||||||         | ||||||||||  ||||||||||||||||    
T  6892899 ttgaatcaaaataaaaagttgttaactttttcaataatttaagcttattagtatacattaatgttt----tgcatatttaaatgtattattataaactag 6892994  T
Q  102 aattgaaatatgatcaaatatatag-tcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtcta 200  Q
    ||||||||||||||  ||||||||| | ||||||| ||||||  ||| |||||||||||||||||||||||| ||| |||||||| ||||||||||||||    
T  6892995 aattgaaatatgatacaatatataggtgaaatttcctaaaaactcatattgattatcaaaagagagtttaatctaattgatatat-agttcgctagtcta 6893093  T
Q  201 tttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    |||||||| ||||||||||||||||||||| ||||||||    
T  6893094 tttaaactcagatcacattgcttatttaaaaatgttcat 6893132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 86 - 239
Target Start/End: Complemental strand, 34510536 - 34510383
Alignment:
Q  86 tattattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatat 185  Q
    ||||||||||||||| ||||||||||||||  |||||||||||||||||| ||||||  |||||||||||||||||||||||||||| ||| ||||||||    
T  34510536 tattattataaactaaaattgaaatatgatacaatatatagtcaaatttcctaaaaactcatgttgattatcaaaagagagtttaatctaattgatatat 34510437  T
Q  186 tagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  34510436 tagttcgctagtctatttaaacttagattacattgcttatttaaagatgttcat 34510383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 2 - 233
Target Start/End: Original strand, 11432330 - 11432557
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaannnnnnnncttcatatttaaacatattattataaactag 101  Q
    ||||||||| |||||||| |||||||||||||| ||||| ||||||| || ||||||||||         | ||||||||||  ||||||| ||||||||    
T  11432330 ttgaattaaaataaaaatgtgttaactttttcagtaatttaagcttactaatatacattaattttt----tgcatatttaaatgtattattgtaaactag 11432425  T
Q  102 aattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctat 201  Q
    ||||||||||||||  ||||||||||||||||   ||||||| |||||||||||||||||||||||||||| ||| |||||||||||||||||| |||||    
T  11432426 aattgaaatatgatacaatatatagtcaaattctctaaaaattcatgttgattatcaaaagagagtttaatttaattgatatattagttcgctaatctat 11432525  T
Q  202 ttaaacttagatcacattgcttatttaaagat 233  Q
    |||||||||||||||||| || ||||||||||    
T  11432526 ttaaacttagatcacattactgatttaaagat 11432557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 2 - 239
Target Start/End: Original strand, 4435116 - 4435349
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaannnnnnnncttcatatttaaacatattattataaactag 101  Q
    ||||||||| ||| ||||||||||||||||||||||||| || ||||||||||||||||||           |||||  ||| |||||| |||||| |||    
T  4435116 ttgaattaaaatataaatttgttaactttttcaataatttaaacttattagtatacattaatttttcg----catatacaaatatattactataaattag 4435211  T
Q  102 aattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctat 201  Q
    ||||||||||||||  ||||||||||| |||| | ||||||  ||||||||||||||||||| |||||||| ||| |||| |||||||| ||||||||||    
T  4435212 aattgaaatatgatacaatatatagtccaattccgtaaaaactcatgttgattatcaaaagatagtttaatctaattgatctattagtttgctagtctat 4435311  T
Q  202 ttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    ||||||||| ||||||||| ||||||||||||||||||    
T  4435312 ttaaacttatatcacattgtttatttaaagatgttcat 4435349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 2 - 239
Target Start/End: Complemental strand, 32519961 - 32519727
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaannnnnnnncttcatatttaaacatattattataaactag 101  Q
    ||||||||| |||||||||||||||  ||| || ||||| ||||||||||||||||||||          | || |||||||  |||||||||||||||     
T  32519961 ttgaattaaaataaaaatttgttaaactttacagtaatttaagcttattagtatacattattttttt---tgcacatttaaatgtattattataaactat 32519865  T
Q  102 aattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctat 201  Q
    ||||||||||||||  |||||||||||||||| ||||||||  | |||||||||||||||||||||||||| ||| |||| ||||| |||||||| ||||    
T  32519864 aattgaaatatgatacaatatatagtcaaattccttaaaaactcgtgttgattatcaaaagagagtttaatctaattgatctattaattcgctagactat 32519765  T
Q  202 ttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    ||||||||  | ||||||||||||||||||||||||||    
T  32519764 ttaaacttcaaccacattgcttatttaaagatgttcat 32519727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 2 - 239
Target Start/End: Original strand, 41819147 - 41819390
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaannnnnnnncttc--------atatttaaacatattatta 93  Q
    ||||||||| |||||||| |||||||||||||| ||||| |||||||||||||||||||||         ||         |||||||||  ||||||||    
T  41819147 ttgaattaaaataaaaatatgttaactttttcagtaatttaagcttattagtatacattaattttttttttttttttttgtatatttaaatgtattatta 41819246  T
Q  94 taaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgc 193  Q
    ||||||||||||||||||||||  |||||||||||||||| | ||||||  ||||| ||||||||||||| |||||||| ||| ||||||||||||| ||    
T  41819247 taaactagaattgaaatatgatacaatatatagtcaaattccctaaaaactcatgtagattatcaaaagaaagtttaatctaattgatatattagtttgc 41819346  T
Q  194 tagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    ||||||||||||||||||||| |||||  | |||||||||||||||    
T  41819347 tagtctatttaaacttagatcgcattg--tttttaaagatgttcat 41819390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 86 - 239
Target Start/End: Complemental strand, 7913035 - 7912882
Alignment:
Q  86 tattattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatat 185  Q
    ||||||||||||||||||||||||| ||||  | ||||||||| |||||| ||||||  |||| ||||||||||||||||||||||| ||| ||||||||    
T  7913035 tattattataaactagaattgaaatctgatacagtatatagtcgaatttcctaaaaactcatgctgattatcaaaagagagtttaatctaattgatatat 7912936  T
Q  186 tagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    |||||||||| ||||||||||||||||| |||||||||| ||||| ||||||||    
T  7912935 tagttcgctaatctatttaaacttagataacattgcttaattaaaaatgttcat 7912882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 2 - 239
Target Start/End: Complemental strand, 22320208 - 22319975
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaannnnnnnncttcatatttaaacatattattataaactag 101  Q
    ||||||||| |||||||| |||||| | ||||| ||||| |||| ||||||| ||||||||         | |||||||| | |||||| ||||||||||    
T  22320208 ttgaattaaaataaaaatatgttaattgtttcagtaatttaagcatattagtctacattaattttt----tgcatatttatatatattactataaactag 22320113  T
Q  102 aattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctat 201  Q
    ||||||||| ||||  |||||||||||||||||  ||||||| ||||||||||||||||| ||||||||||  || ||||||||||||| ||||||||||    
T  22320112 aattgaaatctgatacaatatatagtcaaattttctaaaaattcatgttgattatcaaaaaagagtttaatcaaattgatatattagtttgctagtctat 22320013  T
Q  202 ttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    ||||||||| ||||| ||| ||||||||| || |||||    
T  22320012 ttaaacttatatcacgttgtttatttaaacatattcat 22319975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 126 - 239
Target Start/End: Original strand, 23620930 - 23621043
Alignment:
Q  126 gtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctatttaaacttagatcacattgcttat 225  Q
    |||||||| | ||||||  | |||||||||||||||||||||||||| ||| |||| ||||| || ||||||||||||||||||||||||||||||||||    
T  23620930 gtcaaattccctaaaaactcttgttgattatcaaaagagagtttaatctaattgatctattaatttgctagtctatttaaacttagatcacattgcttat 23621029  T
Q  226 ttaaagatgttcat 239  Q
    ||||| ||||||||    
T  23621030 ttaaatatgttcat 23621043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 92 - 239
Target Start/End: Original strand, 55957573 - 55957720
Alignment:
Q  92 tataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttc 191  Q
    ||||||||| ||| ||||||||||  ||||||||||| ||||   |||||   | |||||||||||||||||||||||||| ||| |||  ||||| |||    
T  55957573 tataaactaaaatagaaatatgatacaatatatagtcgaattctctaaaacctcgtgttgattatcaaaagagagtttaatctaattgaactattatttc 55957672  T
Q  192 gctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    ||||||| | ||||||||||||||||||| ||||||||||||||||||    
T  55957673 gctagtccacttaaacttagatcacattggttatttaaagatgttcat 55957720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 74 - 239
Target Start/End: Complemental strand, 26660286 - 26660121
Alignment:
Q  74 catatttaaacatattattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaata 173  Q
    ||||||||||  |||||||||||| || ||||||||||||||  |||||||||| || |||  ||||| | |||||| | |||  |||||||||||||||    
T  26660286 catatttaaatgtattattataaattataattgaaatatgatataatatatagtaaatttttctaaaacttcatgttaaatattgaaagagagtttaata 26660187  T
Q  174 taactgatatattagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    | | |||| |||||| || ||||||||||||| ||| ||||||||| |||||||||||||| ||||    
T  26660186 ttattgatttattagctcactagtctatttaaccttggatcacattacttatttaaagatgatcat 26660121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 75 - 239
Target Start/End: Complemental strand, 32526544 - 32526380
Alignment:
Q  75 atatttaaacatattattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatat 174  Q
    |||||||||  ||||||||||||||||| ||||||||||||  | |||||| |||||||   ||||||| |||||| | ||||||||| ||||||||| |    
T  32526544 atatttaaatgtattattataaactagagttgaaatatgatatagtatataatcaaattctctaaaaattcatgttaaatatcaaaagcgagtttaatct 32526445  T
Q  175 aactgatatattagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
     | |||| |||||||| |||| |||||||||||||||||| | || ||||||||||  |||||||    
T  32526444 tattgatttattagtttgctaatctatttaaacttagatcgcgttacttatttaaatttgttcat 32526380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 219
Target Start/End: Complemental strand, 56092393 - 56092184
Alignment:
Q  5 aattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaannnnnnnncttcatatttaaacatattattataaactagaat 104  Q
    |||||| ||| |||||||| || ||||||| ||||| |||||||||||||| ||||||        |  ||||||||||  ||||||||||||||| |||    
T  56092393 aattaaaatataaatttgtcaaatttttcagtaatttaagcttattagtatgcattaatttt----ccgcatatttaaatgtattattataaacta-aat 56092299  T
Q  105 tgaaatatgatcaaatatatagtcaaatt-tcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctattt 203  Q
    |||||||||||  |||||||| ||||||| ||  |||||| ||||||||||||||||||||  |||||| ||| |||| ||||||||| | |||||||||    
T  56092298 tgaaatatgatacaatatataatcaaattctcaaaaaaattcatgttgattatcaaaagaggatttaatttaattgatctattagttc-caagtctattt 56092200  T
Q  204 aaacttagatcacatt 219  Q
    ||| |||||| |||||    
T  56092199 aaatttagatgacatt 56092184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 95 - 238
Target Start/End: Complemental strand, 52973836 - 52973694
Alignment:
Q  95 aaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgct 194  Q
    |||||||||||||| ||||||  ||||||||||| ||||   |||| || |||||| |||||||||||  | ||||||   | |||| ||||||||||||    
T  52973836 aaactagaattgaa-tatgatataatatatagtccaattctctaaacattcatgttaattatcaaaaggaaatttaatcacattgatctattagttcgct 52973738  T
Q  195 agtctatttaaacttagatcacattgcttatttaaagatgttca 238  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||    
T  52973737 agtctattttaacttagatcacattacttatttaaagatgttca 52973694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 86 - 239
Target Start/End: Original strand, 37244007 - 37244160
Alignment:
Q  86 tattattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatat 185  Q
    ||||||||||||||||||||||| || |||  ||| ||| || ||||  |||||||   ||||||||||||||||  |||||||||  ||| |||| |||    
T  37244007 tattattataaactagaattgaagtaagatacaatttattgtgaaatgccttaaaacctcatgttgattatcaaagaagagtttaacctaattgatctat 37244106  T
Q  186 tagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    | |||| ||||| |||||||||||  ||||||||||||||||||| ||||||||    
T  37244107 ttgttcactagtttatttaaacttgcatcacattgcttatttaaaaatgttcat 37244160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 75 - 236
Target Start/End: Complemental strand, 50153868 - 50153707
Alignment:
Q  75 atatttaaacatattattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatat 174  Q
    |||||| || |||||||| ||||||| ||||||| ||| |   ||||||||||||||||   ||||||| || ||||||||||||||||| ||||||| |    
T  50153868 atattttaatatattattgtaaactataattgaactataacataatatatagtcaaattctctaaaaattcacgttgattatcaaaagagggtttaatct 50153769  T
Q  175 aactgatatattagttcgctagtctatttaaacttagatcacattgcttatttaaagatgtt 236  Q
     |   ||||||| | ||  ||||||||||||||||| ||||||||||||||||||| |||||    
T  50153768 cataaatatatttgatctttagtctatttaaacttatatcacattgcttatttaaatatgtt 50153707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 147 - 239
Target Start/End: Original strand, 12154284 - 12154376
Alignment:
Q  147 tgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    |||||||||||||||||||||||||| |||||||  ||||||||| |||| ||||||||||||  ||| ||||| ||||||||||||||||||    
T  12154284 tgttgattatcaaaagagagtttaatctaactgagctattagttctctagactatttaaacttcaatcgcattgtttatttaaagatgttcat 12154376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 74 - 235
Target Start/End: Original strand, 30920299 - 30920460
Alignment:
Q  74 catatttaaacatattattataaactagaattgaaatatgatcaaatatatagtcaaatt-tcttaaaaatccatgttgattatcaaaagagagtttaat 172  Q
    ||||||||||  ||||||||||||  |||||| |||||||||  |||||||| | || || ||| ||| ||| || || | |||||||||||||||||||    
T  30920299 catatttaaatgtattattataaataagaatttaaatatgatataatatataataaagttctctaaaacatc-atattaaatatcaaaagagagtttaat 30920397  T
Q  173 ataactgatatattagttcgctagtctatttaaacttagatcacattgcttatttaaagatgt 235  Q
    || | |||||||||||||| ||| | ||||||| |||||||| |||| |||||||||||||||    
T  30920398 attattgatatattagttcactaatttatttaaccttagatcgcattacttatttaaagatgt 30920460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 74 - 232
Target Start/End: Original strand, 43024641 - 43024799
Alignment:
Q  74 catatttaaacatattattataaactagaattgaaatatgatcaaatatatagtcaaatttct-taaaaatccatgttgattatcaaaagagagtttaat 172  Q
    ||||||||||  |||||||||||| ||||||| |||||||||  ||||||||||| ||||||| ||||| | |||||| | ||| |||| | ||||||||    
T  43024641 catatttaaatttattattataaagtagaatttaaatatgatataatatatagtc-aatttctctaaaagttcatgttaaatattaaaacaaagtttaat 43024739  T
Q  173 ataactgatatattagttcgctagtctatttaaacttagatcacattgcttatttaaaga 232  Q
     | | | || |||||||| |  |||||||||||||||||||||||||  |||||||||||    
T  43024740 ctcattaatctattagtttggaagtctatttaaacttagatcacattatttatttaaaga 43024799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 91 - 236
Target Start/End: Complemental strand, 10183809 - 10183661
Alignment:
Q  91 ttataaactagaattgaaatatgat-caa-atatatagtcaaatttcttaaaaatcc--atgttgattatcaaaagagagtttaatataactgatatatt 186  Q
    ||||||||||||||||||||||||| ||| ||||||||| ||||| | ||||||  |  || |||||||||||||||||||||| | ||| |||||| ||    
T  10183809 ttataaactagaattgaaatatgatacaatatatatagtaaaattccctaaaaaaactcatcttgattatcaaaagagagtttactctaattgatatgtt 10183710  T
Q  187 agttcgctagtctatttaaacttagatcacattgcttatttaaagatgtt 236  Q
    ||||||||| |||||||||| |||  ||| ||| |||||||||| |||||    
T  10183709 agttcgctaatctatttaaatttaactca-attacttatttaaaaatgtt 10183661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 74 - 236
Target Start/End: Original strand, 6828981 - 6829142
Alignment:
Q  74 catatttaaacatattattataaactagaattgaaatatgatcaaatatatagtcaaatttct-taaaaatccatgttgattatcaaaagagagtttaat 172  Q
    ||||||||||  |||||||||||| |||||||||||||||||  |||||||||| ||| |||| ||||| | |||||| | |||| ||| ||| ||||||    
T  6828981 catatttaaatgtattattataaattagaattgaaatatgatataatatatagt-aaacttctctaaaacttcatgttaaatatcgaaa-agaatttaat 6829078  T
Q  173 ataactgatatattagttcgctagtctatttaaacttagatcacattgcttatttaaagatgtt 236  Q
    || | |||| |||||| | | ||||| ||||||  ||||||| |||| ||||||||||||||||    
T  6829079 atcattgatctattagcttggtagtcaatttaacattagatcgcattacttatttaaagatgtt 6829142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 154 - 239
Target Start/End: Complemental strand, 36105840 - 36105755
Alignment:
Q  154 tatcaaaagagagtttaatataactgatatattagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    ||||||||||||||||||| | | ||||||||||||||| ||||||||||||||||  ||||||||   |||||||| ||||||||    
T  36105840 tatcaaaagagagtttaatctcattgatatattagttcgttagtctatttaaacttgaatcacattaaatatttaaaaatgttcat 36105755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 119 - 239
Target Start/End: Complemental strand, 52264440 - 52264319
Alignment:
Q  119 atatatagtcaaa-tttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctatttaaacttagatcaca 217  Q
    ||||||||| ||| |||||||||||| ||| || | || |||||| || |||||| | | | || ||||||||||||||| |||||||||||| ||||||    
T  52264440 atatatagttaaactttcttaaaaattcatttttaataccaaaagggaatttaatctcattaatttattagttcgctagtttatttaaacttatatcaca 52264341  T
Q  218 ttgcttatttaaagatgttcat 239  Q
    || |||||| ||||||||||||    
T  52264340 ttacttattcaaagatgttcat 52264319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 239
Target Start/End: Original strand, 8956577 - 8956728
Alignment:
Q  87 attattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatatt 186  Q
    |||||||||||||| ||||||||||||||  |||| ||| ||||| | ||||||||| |||||  | |||||||||  | |||||| ||| |||| | ||    
T  8956577 attattataaactataattgaaatatgatataatacataatcaaa-tccttaaaaattcatgtgaaatatcaaaaggaactttaatctaattgatttgtt 8956675  T
Q  187 agttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    ||||| || |||| |||||| ||| |||| ||| |||||| ||||||| ||||    
T  8956676 agttctctggtctttttaaagttatatcatattacttattaaaagatgctcat 8956728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 74 - 239
Target Start/End: Original strand, 37665919 - 37666086
Alignment:
Q  74 catatttaaacatattattataaactagaattgaaatatgatcaaatat--atagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaa 171  Q
    ||||||||||  ||| |||||||||| |||||||| ||||||  |||||  |||||||| |||| |||||   |||||| | ||||||| ||||||||||    
T  37665919 catatttaaatgtatgattataaactggaattgaagtatgatataatatatatagtcaagtttcctaaaatctcatgttaaatatcaaatgagagtttaa 37666018  T
Q  172 tataactgatatattagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    | |||  |||||||| ||||  || | |||||||||||| |||||||  ||||  |||| ||||||||    
T  37666019 tctaatcgatatattcgttcaatattatatttaaacttaaatcacatgacttacgtaaatatgttcat 37666086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 90 - 236
Target Start/End: Original strand, 27292375 - 27292526
Alignment:
Q  90 attataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgat-----tatcaaaagagagtttaatataactgatata 184  Q
    |||||||| |||||||| ||||||||  ||||||||||||||||   ||||||| ||| |  ||     |||||||||  |||||||||| | |||| ||    
T  27292375 attataaattagaattgtaatatgatataatatatagtcaaattctctaaaaattcatatatatatatatatcaaaaggtagtttaatatcattgatcta 27292474  T
Q  185 ttagttcgctagtctatttaaacttagatcacattgcttatttaaagatgtt 236  Q
    ||||||   |||| || ||||||||||||||| || ||||||||||||||||    
T  27292475 ttagtttcatagtttagttaaacttagatcacgttacttatttaaagatgtt 27292526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 75 - 239
Target Start/End: Complemental strand, 29145674 - 29145508
Alignment:
Q  75 atatttaaacatattattataaactagaattgaaatatgatcaaatatatagtcaaa-tttcttaaaaatccatgttgattatcaaaagagagtttaata 173  Q
    ||||||||| |||||||||||||||  |||||||||| |||  |||| ||||||||| ||||| |||||   ||| | | |||||||| ||||||||||     
T  29145674 atatttaaatatattattataaactgaaattgaaataagatataatagatagtcaaattttctaaaaaaaatatggtaaatatcaaaatagagtttaatc 29145575  T
Q  174 taactgat-atattagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    |   |||| | |||||||| |  ||||||||||||||| ||||  || |||||||||| ||||||||    
T  29145574 ttgttgatcacattagttcaccggtctatttaaacttaaatcaagttacttatttaaatatgttcat 29145508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 118 - 234
Target Start/End: Complemental strand, 24014626 - 24014510
Alignment:
Q  118 aatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctatttaaacttagatcaca 217  Q
    |||||||| |||||||  |||||| | |||||| | ||||||||   ||||||||   | |||| |||||||| | ||||||||||||| |||||||| |    
T  24014626 aatatataatcaaattctttaaaatttcatgttaaatatcaaaattaagtttaatcatattgatctattagtttgttagtctatttaaatttagatcata 24014527  T
Q  218 ttgcttatttaaagatg 234  Q
    || ||||||||||||||    
T  24014526 ttacttatttaaagatg 24014510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 34514343 - 34514287
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagcttattagtataca 58  Q
    ||||||||| ||||||||||||||||||||| | ||||| ||||||||||| |||||    
T  34514343 ttgaattaaaataaaaatttgttaactttttaagtaatttaagcttattagcataca 34514287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 172
Target Start/End: Original strand, 39722002 - 39722099
Alignment:
Q  75 atatttaaacatattattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaat 172  Q
    |||||||||  |||||||||||||||||||||||||||||    ||||||||| ||||||  |||||   ||| || | |||||||| ||||||||||    
T  39722002 atatttaaatgtattattataaactagaattgaaatatgaaatcatatatagttaaattttctaaaatgtcatcttaaatatcaaaatagagtttaat 39722099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 239
Target Start/End: Original strand, 50528844 - 50528905
Alignment:
Q  178 tgatatattagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    ||||||||||||| | ||||||||||||||||| |||| | |  ||||||||||||||||||    
T  50528844 tgatatattagtttgatagtctatttaaacttaaatcagaatagttatttaaagatgttcat 50528905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 12154164 - 12154224
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaa 62  Q
    ||||||||| |||||||||||||||| |||  | | ||| |||||||||||||||||||||    
T  12154164 ttgaattaaaataaaaatttgttaacatttagagtgatttaagcttattagtatacattaa 12154224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 178
Target Start/End: Original strand, 42894708 - 42894791
Alignment:
Q  86 tattattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataact 178  Q
    ||||||||||||||||||||||||||||         ||||||||||||| ||||||  |||||| | |||||||||||| |||||| |||||    
T  42894708 tattattataaactagaattgaaatatg---------atagtcaaatttcctaaaaactcatgttaaatatcaaaagagattttaatctaact 42894791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 86 - 216
Target Start/End: Original strand, 33051898 - 33052029
Alignment:
Q  86 tattattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatca--aaagagagtttaatataactgatat 183  Q
    ||||||||||||||||| ||||||||||||  ||||||||   |||||  |||||||| |||||| | |||||  | |||||| |||||   | ||||||    
T  33051898 tattattataaactaga-ttgaaatatgatataatatataacgaaattctttaaaaattcatgttaaatatcaagagagagagattaatcccattgatat 33051996  T
Q  184 attagttcgctagtctatttaaacttagatcac 216  Q
    | || ||||| |||| |||||| ||||||||||    
T  33051997 aataattcgccagtcaatttaaccttagatcac 33052029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 50528769 - 50528826
Alignment:
Q  74 catatttaaacatattattataaactagaattgaaatatgatcaaatatatagtcaaa 131  Q
    |||||||||| | ||||||||||| || |||| |||||||||  ||||||||||||||    
T  50528769 catatttaaataaattattataaagtaaaattaaaatatgatataatatatagtcaaa 50528826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 12080612 - 12080644
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttca 34  Q
    ||||||||| |||||||||||||||||||||||    
T  12080612 ttgaattaaaataaaaatttgttaactttttca 12080644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 113
Target Start/End: Complemental strand, 25592386 - 25592350
Alignment:
Q  77 atttaaacatattattataaactagaattgaaatatg 113  Q
    |||||||  ||||||||||||||||||||||||||||    
T  25592386 atttaaatgtattattataaactagaattgaaatatg 25592350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 37243925 - 37243984
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttt-tcaataattcaagcttattagtatacatta 61  Q
    ||||||||| ||| |||||||||| ||||| ||||||||| |||||||||| |||||||||    
T  37243925 ttgaattaaaatataaatttgttatcttttttcaataatttaagcttatta-tatacatta 37243984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 126; Significance: 4e-65; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 5 - 239
Target Start/End: Complemental strand, 16055199 - 16054966
Alignment:
Q  5 aattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaannnnnnnncttcatatttaaacatattat--tataaactaga 102  Q
    |||||| ||||| ||||||||||||||||| ||||| |||||||||||||||||||||         | ||||||||||  ||||||  |||||||||||    
T  16055199 aattaaaataaacatttgttaactttttcagtaatttaagcttattagtatacattaatttttt---tgcatatttaaatgtattatattataaactaga 16055103  T
Q  103 attgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctatt 202  Q
    |||||||| ||||  |||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  16055102 attgaaatctgatacaatatatagtcaaatttcttaaaaactcatgttgattatcaaaagagagtttaatctaattgatatattagttcgctagtctatt 16055003  T
Q  203 taaacttagatcacattgcttatttaaagatgttcat 239  Q
    ||||||||||| |||||| ||||| ||||||||||||    
T  16055002 taaacttagattacattgtttattcaaagatgttcat 16054966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 2 - 239
Target Start/End: Complemental strand, 9730369 - 9730137
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaannnnnnnncttcatatttaaacatattattataaactag 101  Q
    ||||||||| ||||||||||||||||||||||  ||||| ||| |||||||||||||||||         | ||||||||||  ||||||||||||||||    
T  9730369 ttgaattaaaataaaaatttgttaactttttcggtaatttaaggttattagtatacattaatttt-----tacatatttaaatgtattattataaactag 9730275  T
Q  102 aattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctat 201  Q
    ||||||||||||||  ||||||| ||||||||   ||||||  || ||||||||||||||||||||||||| ||| |||| |||||||||||||||||||    
T  9730274 aattgaaatatgatacaatatatggtcaaattctctaaaaactcaggttgattatcaaaagagagtttaatttaattgatctattagttcgctagtctat 9730175  T
Q  202 ttaaacttagatcacattgcttatttaaagatgttcat 239  Q
     |||| ||| | ||||||||||||||||||||||||||    
T  9730174 ctaaatttataccacattgcttatttaaagatgttcat 9730137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 2 - 236
Target Start/End: Complemental strand, 43898307 - 43898074
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaannnnnnnncttcatatttaaacatattattataaactag 101  Q
    ||||||||| ||||||||||||||||||||| | ||||| || |||||||  |||||||||         | ||||||||||  ||||||||| || |||    
T  43898307 ttgaattaaaataaaaatttgttaactttttaagtaatttaaacttattaaaatacattaatttttt---tgcatatttaaaagtattattattaaatag 43898211  T
Q  102 aattgaaatatgat-caa-atatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtct 199  Q
    |||||||||||| | ||| |||||||||||| |||  ||||||  |||||||||||||||||||||||||||| ||| ||||||||||||| ||||| ||    
T  43898210 aattgaaatatggtacaatatatatagtcaacttttctaaaaacacatgttgattatcaaaagagagtttaatctaattgatatattagtttgctagact 43898111  T
Q  200 atttaaacttagatcacattgcttatttaaagatgtt 236  Q
    ||||||||||||||||||||| |||||||||||||||    
T  43898110 atttaaacttagatcacattgtttatttaaagatgtt 43898074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 2 - 239
Target Start/End: Complemental strand, 10057461 - 10057225
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaannnnnnnncttcatatttaaacatattattataaactag 101  Q
    ||||||||| ||| ||||||||||||||||||||| ||| || ||||||||||||||||||           ||||| ||||  ||||||||||||||||    
T  10057461 ttgaattaaaatataaatttgttaactttttcaattatttaaacttattagtatacattaatttttcg----catatataaatgtattattataaactag 10057366  T
Q  102 aattgaaatatgatcaaatatatagtcaaatttcttaaaaat---ccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtc 198  Q
    ||||||||||||||  |||||||||||||||  | ||||||    ||||||||| |||||||||| | |||||| ||| |||| ||||| ||||||||||    
T  10057365 aattgaaatatgatacaatatatagtcaaatcccgtaaaaaaataccatgttgactatcaaaagatattttaatctaattgatctattaattcgctagtc 10057266  T
Q  199 tatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    |||||||||||| ||||||||| ||||||||||| ||||||    
T  10057265 tatttaaacttatatcacattgtttatttaaagaagttcat 10057225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 86 - 239
Target Start/End: Complemental strand, 16735206 - 16735053
Alignment:
Q  86 tattattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatat 185  Q
    ||||||||||||||||||| ||||||||||  ||||||||||| |||||| |||||   | ||||||||||| |||||||||||| | ||| |||  |||    
T  16735206 tattattataaactagaatagaaatatgatacaatatatagtcgaatttcctaaaacctcgtgttgattatcgaaagagagtttagtttaattgaactat 16735107  T
Q  186 tagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    ||||||||||||| ||||||||||| |||||||| |||||||||||||||||||    
T  16735106 tagttcgctagtccatttaaacttacatcacattacttatttaaagatgttcat 16735053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 2 - 235
Target Start/End: Complemental strand, 5443175 - 5442948
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaannnnnnnncttcatatttaaacatattattataaactag 101  Q
    ||||||||| ||| |||||||  |||||||||  ||||| |||||| ||||||||||||||           ||||| ||||  |||| ||||||| |||    
T  5443175 ttgaattaaaatataaatttgcaaactttttcggtaatttaagcttgttagtatacattaacttttca----catatataaatgtattcttataaattag 5443080  T
Q  102 aattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctat 201  Q
    ||||||||||||||  |||||||||||||||| | ||||    || ||||||||||||||||||||||||| ||| |||| |||||||||| ||||||||    
T  5443079 aattgaaatatgatataatatatagtcaaattccctaaact--caagttgattatcaaaagagagtttaatctaattgatctattagttcgttagtctat 5442982  T
Q  202 ttaaacttagatcacattgcttatttaaagatgt 235  Q
    ||||||||||||| ||||||||||||||| ||||    
T  5442981 ttaaacttagatcgcattgcttatttaaatatgt 5442948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 2 - 239
Target Start/End: Complemental strand, 5880471 - 5880235
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagctt-attagtatacattaannnnnnnncttcatatttaaacatattattataaacta 100  Q
    ||||||||| ||| |||||||| || |||||| |||||| |||||| |||||||||||||||         | ||||| | ||  |||||||||||||||    
T  5880471 ttgaattaaaatataaatttgtaaaatttttcgataatttaagctttattagtatacattaatttttttt-tgcatatatcaatgtattattataaacta 5880373  T
Q  101 gaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtcta 200  Q
    |||| || |||||||  ||||||||||| |||| | |||||   | ||||||||| |||||||||||||||| ||| ||   |||||||||||||||| |    
T  5880372 gaatggatatatgatacaatatatagtcgaattccctaaaatctcttgttgattaccaaaagagagtttaatctaattggc-tattagttcgctagtcca 5880274  T
Q  201 tttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    |||||||||||||||||||||||||||||||||||||||    
T  5880273 tttaaacttagatcacattgcttatttaaagatgttcat 5880235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 2 - 239
Target Start/End: Original strand, 9716154 - 9716388
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagctt-attagtatacattaannnnnnnncttcatatttaaacatattattataaacta 100  Q
    ||||||||| ||| ||||  || |||||||| ||||||| |||||| |||||||||||||||         | ||||| ||||  |||||||||||||||    
T  9716154 ttgaattaaaatataaataagtaaacttttttaataatttaagctttattagtatacattaattttt----tgcatatataaatgtattattataaacta 9716249  T
Q  101 gaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtcta 200  Q
    |||| |||||||||   ||||||||||| |||| | |||||     |||||||||||||||||||||||||| ||| |||  |||||||||||||||| |    
T  9716250 gaatagaaatatgacgcaatatatagtcgaattccctaaaaccttgtgttgattatcaaaagagagtttaatctaattgaactattagttcgctagtcaa 9716349  T
Q  201 tttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    | ||||||||||||||||||||||||||||||| |||||    
T  9716350 tgtaaacttagatcacattgcttatttaaagatattcat 9716388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 86 - 239
Target Start/End: Complemental strand, 1845391 - 1845238
Alignment:
Q  86 tattattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatat 185  Q
    ||||||||||||||||||| ||||||||||  ||||||||||| ||||||  ||||   | |||||||||||||||||||||||||| ||| | |  |||    
T  1845391 tattattataaactagaatagaaatatgatacaatatatagtcgaatttcccaaaacctcgtgttgattatcaaaagagagtttaatctaattaaactat 1845292  T
Q  186 tagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    ||||||||||||| ||||||| |||||||| | |||||||||||||||||||||    
T  1845291 tagttcgctagtccatttaaaattagatcataatgcttatttaaagatgttcat 1845238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 5 - 239
Target Start/End: Original strand, 4816577 - 4816808
Alignment:
Q  5 aattaacataaaaatttgttaactttttcaataattcaagctt-attagtatacattaannnnnnnncttcatatttaaacatattattataaactagaa 103  Q
    |||||| ||| |||||| | |||||||||||||||| |||||| |||||||||||||||         | ||||| ||||  ||||||||||||||||||    
T  4816577 aattaaaatataaatttataaactttttcaataatttaagctttattagtatacattaagtttt----tgcatatataaatgtattattataaactagaa 4816672  T
Q  104 ttgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctattt 203  Q
    | |||||||| |  | |||||| || |||| | |||||   | |||| ||||||||||||||||||||| ||| |||  |||||||||||| ||| ||||    
T  4816673 tagaaatatggtacagtatataatcgaattccctaaaacctcgtgttcattatcaaaagagagtttaatttaattgaactattagttcgctggtccattt 4816772  T
Q  204 aaacttagatcacattgcttatttaaagatgttcat 239  Q
    ||||||||| ||||||||||||||||| ||||||||    
T  4816773 aaacttagaccacattgcttatttaaatatgttcat 4816808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 86 - 239
Target Start/End: Complemental strand, 32700765 - 32700612
Alignment:
Q  86 tattattataaactagaattgaaatatgatcaaatatatagtcaaatttct-taaaaatccatgttgattatcaaaagagagtttaatataactgatata 184  Q
    |||||||||||| ||||||||||||||||   |||||||||| ||| |||| ||||| | |||||| | |||| |||||||||||||||| | |||| ||    
T  32700765 tattattataaattagaattgaaatatgaaataatatatagt-aaagttctctaaaacttcatgttaaatatcgaaagagagtttaatatcattgattta 32700667  T
Q  185 ttagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    ||||||||||||||||||||| |||  |||||||| |||||||||||||||||||    
T  32700666 ttagttcgctagtctatttaaccttgaatcacattacttatttaaagatgttcat 32700612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 86 - 236
Target Start/End: Original strand, 38556443 - 38556593
Alignment:
Q  86 tattattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatat 185  Q
    ||||||| ||||||||||| ||||||||||  ||||||||||| |||| | ||||| | | |||||||||||||||||||||||||| | | |||  | |    
T  38556443 tattattttaaactagaatagaaatatgatacaatatatagtcgaattccctaaaacttcgtgttgattatcaaaagagagtttaatctgattgaacttt 38556542  T
Q  186 tagttcgctagtctatttaaacttagatcacattgcttatttaaagatgtt 236  Q
    |||||||| |||| ||||||||||| ||||||||||||||||||| |||||    
T  38556543 tagttcgccagtccatttaaacttatatcacattgcttatttaaatatgtt 38556593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 74 - 239
Target Start/End: Original strand, 5712491 - 5712656
Alignment:
Q  74 catatttaaacatattattataaactagaattgaaatatgatcaaatatatagtcaaatttct-taaaaatccatgttgattatcaaaagagagtttaat 172  Q
    ||||||||||  |||||||||||| |||||||||||| ||||   ||||||||| ||| |||| ||||| | |||||| | |||||||||||||||||||    
T  5712491 catatttaaatgtattattataaattagaattgaaatgtgatatgatatatagt-aaagttctctaaaacttcatgttaaatatcaaaagagagtttaat 5712589  T
Q  173 ataactgatatattagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    || | |||| |||||  | |||||||||||||| ||||||||||||| |||||||||| ||||||||    
T  5712590 atcattgatctattaacttgctagtctatttaaccttagatcacattacttatttaaatatgttcat 5712656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 160 - 239
Target Start/End: Original strand, 39848539 - 39848618
Alignment:
Q  160 aagagagtttaatataactgatatattagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||||||  |||||||| |||||||||||||||||||    
T  39848539 aagagagtttaatatcactgatctattagttcgctagtctatttaaacttgaatcacattacttatttaaagatgttcat 39848618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 236
Target Start/End: Complemental strand, 13560185 - 13559956
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaannnnnnnncttcatatttaaacatattattataaactag 101  Q
    ||||||||| |||  |||| ||||||||||||| ||||| ||  |||||||||||||||||         | || |||||||  |||||||||||| | |    
T  13560185 ttgaattaaaatatgaattagttaactttttcagtaatttaattttattagtatacattaattttt----tgcacatttaaatgtattattataaatttg 13560090  T
Q  102 aattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctat 201  Q
    ||||||||||| ||  | ||||||||| |||| | ||||||   ||||||||||||||||||||| ||||| |||  |||||||| | | ||||||||||    
T  13560089 aattgaaatataatatagtatatagtcgaattccctaaaaactgatgttgattatcaaaagagagattaatctaatcgatatatt-gattgctagtctat 13559991  T
Q  202 ttaaacttagatcacattgcttatttaaagatgtt 236  Q
    ||||||||||||  |||||||| |||||| |||||    
T  13559990 ttaaacttagattgcattgcttgtttaaaaatgtt 13559956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 86 - 239
Target Start/End: Complemental strand, 7599089 - 7598936
Alignment:
Q  86 tattattataaactagaattgaaatatgatcaaatatatagtcaaatt-tcttaaaaatccatgttgattatcaaaagagagtttaatataactgatata 184  Q
    ||||||||||||||| ||||||||||||||  |||||||||||||||| ||| || ||| |||||| | ||||||||| | | |||||   | |||||||    
T  7599089 tattattataaactataattgaaatatgatataatatatagtcaaattctctaaataat-catgttaaatatcaaaagggggcttaatcacattgatata 7598991  T
Q  185 ttagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    |||||||| ||||||||| ||| | ||||||| || |||||||||| ||||||||    
T  7598990 ttagttcgatagtctattcaaattcagatcacgttacttatttaaatatgttcat 7598936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 86 - 239
Target Start/End: Original strand, 12677749 - 12677902
Alignment:
Q  86 tattattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatat 185  Q
    |||||||||| | ||||| |||||||||||  | |||||| |||||||  |||||||| |||||| | |||||||| | |||||||| |   ||||||||    
T  12677749 tattattatatagtagaactgaaatatgatatattatataatcaaattctttaaaaattcatgttaaatatcaaaaaaaagtttaatctcgttgatatat 12677848  T
Q  186 tagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    |||| | ||||| |||||||| ||||| | | |||||||||||||||| |||||    
T  12677849 tagtccactagtttatttaaatttagaacgcgttgcttatttaaagatattcat 12677902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 102 - 239
Target Start/End: Complemental strand, 36758262 - 36758125
Alignment:
Q  102 aattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctat 201  Q
    ||||||||||||||  |||||||||| || ||| |||||  | |||||| | ||||||||||||||||||||| | |||| |||||||||| | |||| |    
T  36758262 aattgaaatatgatataatatatagtaaagttttttaaaccttcatgttaaatatcaaaagagagtttaatatcattgatctattagttcgttcgtctgt 36758163  T
Q  202 ttaaacttagatcacattgcttatttaaagatgttcat 239  Q
     ||  ||| |||||| || |||||||||||||||||||    
T  36758162 atactctttgatcacgttacttatttaaagatgttcat 36758125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 75 - 238
Target Start/End: Original strand, 37259256 - 37259412
Alignment:
Q  75 atatttaaacatattattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagag-agtttaata 173  Q
    ||||||||| || ||||| |||||||||||| ||| |||||  |||||||| | |||||| |||||||| | |||| | ||| |||| || ||||||||     
T  37259256 atatttaaatattttattgtaaactagaattaaaacatgatataatatataattaaattttttaaaaattcgtgttaaatataaaaaaaggagtttaatc 37259355  T
Q  174 taactgatatattagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttca 238  Q
    | |        |||||||| | |||||||||||||||||||||||| || |||||||||||||||    
T  37259356 tca--------ttagttcgtttgtctatttaaacttagatcacattactgatttaaagatgttca 37259412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 16202142 - 16202200
Alignment:
Q  181 tatattagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    |||||||| |||| ||||||||||| |||  |||||||| |||||||||||||||||||    
T  16202142 tatattagctcgcaagtctatttaaccttgaatcacattacttatttaaagatgttcat 16202200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 16202049 - 16202100
Alignment:
Q  74 catatttaaacatattattataaactagaattgaaatatgatcaaatatata 125  Q
    ||||||||||  |||||||||||| |||||||||||||||||  ||||||||    
T  16202049 catatttaaatgtattattataaattagaattgaaatatgatataatatata 16202100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 164
Target Start/End: Complemental strand, 27023502 - 27023424
Alignment:
Q  86 tattattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagag 164  Q
    ||||||||||||||| ||||||||||||||   |||| |||  ||||| |||||||||  ||||| | |||||||||||    
T  27023502 tattattataaactacaattgaaatatgatatcatatgtagagaaattccttaaaaatttatgttaaatatcaaaagag 27023424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 16735285 - 16735232
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagc-ttattagta 54  Q
    ||||||||| ||| |||||||| |||||||||||||||| |||| |||||||||    
T  16735285 ttgaattaaaatataaatttgtaaactttttcaataatttaagctttattagta 16735232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 115
Target Start/End: Original strand, 26714075 - 26714115
Alignment:
Q  75 atatttaaacatattattataaactagaattgaaatatgat 115  Q
    ||||||||| |||||||| | ||||||||||||||||||||    
T  26714075 atatttaaatatattattgttaactagaattgaaatatgat 26714115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 116; Significance: 4e-59; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 2 - 237
Target Start/End: Complemental strand, 22990743 - 22990508
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaannnnnnnncttcatatttaaacatattattataaactag 101  Q
    |||| |||| ||||| ||||||||||||||||| ||||| |||||||||||||||||||||         | |||||||||| ||||||||||||||||     
T  22990743 ttgagttaaaataaatatttgttaactttttcagtaatttaagcttattagtatacattaataatttttttgcatatttaaatatattattataaactat 22990644  T
Q  102 aattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctat 201  Q
    ||||||||||||||  |||||||||||||||| | ||||||| ||| || |||||| |||||||||||||| ||| |||||||||| || | ||||||||    
T  22990643 aattgaaatatgatacaatatatagtcaaattccctaaaaattcatttttattatctaaagagagtttaatctaattgatatattaatttgttagtctat 22990544  T
Q  202 ttaaacttagatcacattgcttatttaaagatgttc 237  Q
    ||||||||| ||||||||||||||| ||||||||||    
T  22990543 ttaaacttatatcacattgcttattaaaagatgttc 22990508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 14 - 239
Target Start/End: Original strand, 29563536 - 29563750
Alignment:
Q  14 aaaaatttgttaactttttcaataattcaagcttattagtatacattaannnnnnnncttcatatttaaacatattattataaactagaattgaaatatg 113  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||         | ||||||||||  ||||||||||||||||||||||||||||    
T  29563536 aaaaatttgttaactttttcagtaatttaagcttattagtatacattaatttta----tgcatatttaaatgtattattataaactagaattgaaatatg 29563631  T
Q  114 atcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctatttaaacttagat 213  Q
    ||  |||||||||| ||||||| ||||||  | | |||||||||||||||||||||||| ||| ||||||||||||||||||||||||      ||||||    
T  29563632 atacaatatatagttaaatttcctaaaaactctt-ttgattatcaaaagagagtttaatctaattgatatattagttcgctagtctat------ttagat 29563724  T
Q  214 cacattgcttatttaaagatgttcat 239  Q
    ||||||||||||||||||||||||||    
T  29563725 cacattgcttatttaaagatgttcat 29563750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 75 - 239
Target Start/End: Complemental strand, 29697647 - 29697483
Alignment:
Q  75 atatttaaacatattattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatat 174  Q
    |||||||||  ||||||||||||||||||||||||||| ||   ||||||||||||||| | ||||||  |||||||||||||||||||||||||||| |    
T  29697647 atatttaaatgtattattataaactagaattgaaatataataccatatatagtcaaattccgtaaaaactcatgttgattatcaaaagagagtttaatct 29697548  T
Q  175 aactgatatattagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    || | ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  29697547 aattaatatattagttcgttagtctatttaaacttagatcgcattgcttatttaaagatgttcat 29697483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 86 - 239
Target Start/End: Original strand, 21523770 - 21523924
Alignment:
Q  86 tattattataaactagaattgaaatatgatcaaatatatagtcaaatttct-taaaaatccatgttgattatcaaaagagagtttaatataactgatata 184  Q
    ||||||||||||||| ||||||||| ||||  |||||||||||||||  |  ||||||| |||||||||||||||||||||| ||||| ||| |||||||    
T  21523770 tattattataaactaaaattgaaatctgatacaatatatagtcaaatacccctaaaaattcatgttgattatcaaaagagagattaatctaattgatata 21523869  T
Q  185 ttagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21523870 ttagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 21523924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 2 - 239
Target Start/End: Complemental strand, 9504057 - 9503823
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagctt-attagtatacattaannnnnnnncttcatatttaaacatattattataaacta 100  Q
    |||||||||  || |||| ||| |||||||||||||||| || ||| |||||||||||||||         | ||||| ||||  |||||||||||||||    
T  9504057 ttgaattaaagtataaatatgtaaactttttcaataatttaatctttattagtatacattaattttt----tgcatatataaatgtattattataaacta 9503962  T
Q  101 gaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtcta 200  Q
    |||| ||||||||||  ||||||||||| |||||| |||||   ||||||||||||| |||||||||||||| ||| |||  |||||||||||||||| |    
T  9503961 gaatagaaatatgatacaatatatagtcgaatttcctaaaacctcatgttgattatctaaagagagtttaatctaattgaattattagttcgctagtcca 9503862  T
Q  201 tttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    |||||||||||||||||||||||||||||||||||||||    
T  9503861 tttaaacttagatcacattgcttatttaaagatgttcat 9503823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 72 - 235
Target Start/End: Original strand, 43464450 - 43464612
Alignment:
Q  72 ttcatatttaaacatattattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaa 171  Q
    |||||||||| |  ||||||||||| ||||||||||||| ||||  ||||||  |||||||  | ||||||| ||||||||||||||||||| |||||||    
T  43464450 ttcatatttatatctattattataa-ctagaattgaaatttgatacaatatacggtcaaataccctaaaaattcatgttgattatcaaaagaaagtttaa 43464548  T
Q  172 tataactgatatattagttcgctagtctatttaaacttagatcacattgcttatttaaagatgt 235  Q
    | ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  43464549 tctaattgatatattaattcgctagtctatttaaacttagatcacattgcttatttaaagatgt 43464612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 2 - 229
Target Start/End: Complemental strand, 20601827 - 20601600
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattca---agcttattagtatacattaannnnnnnncttcatatttaaacatattattataaac 98  Q
    ||||||||| ||||||||||||||||||||||| ||||| |   || |||||||||||||||||            |||||||||  |||||||||||||    
T  20601827 ttgaattaaaataaaaatttgttaactttttcagtaattaattaagtttattagtatacattaattttttggt---atatttaaatgtattattataaac 20601731  T
Q  99 tagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtc 198  Q
    || ||||||||||||||  |||||||||||||||| | ||||||  |||||||||||||||||| ||||||||| ||| ||||||||||||||| |||||    
T  20601730 tataattgaaatatgatacaatatatagtcaaattccctaaaaactcatgttgattatcaaaagggagtttaatctaattgatatattagttcgttagtc 20601631  T
Q  199 tatttaaacttagatcacattgcttatttaa 229  Q
    |||||||||||| | | |||| |||||||||    
T  20601630 tatttaaacttataacgcattacttatttaa 20601600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 7 - 235
Target Start/End: Complemental strand, 27048794 - 27048570
Alignment:
Q  7 ttaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaannnnnnnncttcatatttaaacatattattataaactagaattg 106  Q
    |||| ||| ||||||||||||||||||||||||| ||  |||||||||||||||||           ||||| ||||  ||||||||||||||| |||||    
T  27048794 ttaaaatataaatttgttaactttttcaataatttaacattattagtatacattaatttttcg----catatataaatgtattattataaactataattg 27048699  T
Q  107 aaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctatttaaa 206  Q
    |||||||||  |||||||||||||||||| ||||||  ||||||||||||||||||| |||||||| | | |||| ||||| |||| |||||||||||||    
T  27048698 aaatatgatacaatatatagtcaaatttcgtaaaaactcatgttgattatcaaaagatagtttaatcttattgatctattaattcggtagtctatttaaa 27048599  T
Q  207 cttagatcacattgcttatttaaagatgt 235  Q
    |||| || |||||  ||||||||||||||    
T  27048598 cttatattacattagttatttaaagatgt 27048570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 87 - 239
Target Start/End: Original strand, 45613155 - 45613307
Alignment:
Q  87 attattataaactagaattgaaatatgat-caaatatatagtcaaatttct-taaaaatccatgttgattatcaaaagagagtttaatataactgatata 184  Q
    ||||||||||||||||||||||||||||| |||||||||||||||  |||| ||||||| || ||||||||||||||||||||||||| ||| ||||| |    
T  45613155 attattataaactagaattgaaatatgatacaaatatatagtcaa--ttctgtaaaaattcacgttgattatcaaaagagagtttaatctaattgataca 45613252  T
Q  185 ttagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    |||||||| ||||||| ||||||| ||| ||||||| |||||||||||| |||||    
T  45613253 ttagttcgttagtctagttaaactaagaccacattgtttatttaaagatattcat 45613307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 86 - 239
Target Start/End: Original strand, 51880215 - 51880368
Alignment:
Q  86 tattattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatat 185  Q
    |||||||||||||||||||  |||||||||  |||||||||||||||||  |||||   | |||||||||||||||||||||||||| ||| |||   ||    
T  51880215 tattattataaactagaataaaaatatgatacaatatatagtcaaattttctaaaacctcgtgttgattatcaaaagagagtttaatctaattgaacaat 51880314  T
Q  186 tagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    ||||| ||||||| ||||||||||||||||||||||||| |||||||| |||||    
T  51880315 tagtttgctagtccatttaaacttagatcacattgcttacttaaagatattcat 51880368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 74 - 236
Target Start/End: Original strand, 11836854 - 11837016
Alignment:
Q  74 catatttaaacatattattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaata 173  Q
    ||||||||||  |||||||||||| |||||||||||||||||  |||||||||| |||||   ||||| |  ||||| | |||| |||||||||||||||    
T  11836854 catatttaaatgtattattataaattagaattgaaatatgatataatatatagtaaaattctctaaaacttgatgttaaatatcgaaagagagtttaata 11836953  T
Q  174 taactgatatattagttcgctagtctatttaaacttagatcacattgcttatttaaagatgtt 236  Q
    | | ||||||||||| |||||||||||||||| ||| ||||||||| ||||||||||| ||||    
T  11836954 tcattgatatattagctcgctagtctatttaacctttgatcacattacttatttaaaggtgtt 11837016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 74 - 239
Target Start/End: Complemental strand, 36159336 - 36159170
Alignment:
Q  74 catatttaaacatattattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatc-aaaagagagtttaat 172  Q
    ||||||||||  |||||||||||| |||||||||||||||||  |||||||||| || ||   ||||| | |||||| | |||  |||| ||||||||||    
T  36159336 catatttaaatgtattattataaattagaattgaaatatgatataatatatagtaaagttatctaaaacttcatgttaaatattgaaaaaagagtttaat 36159237  T
Q  173 ataactgatatattagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    |||| ||||||||||| ||||||| |||||||| ||| ||||| ||| |||||||||| ||||||||    
T  36159236 ataattgatatattagctcgctaggctatttaatcttggatcatattacttatttaaatatgttcat 36159170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 74 - 239
Target Start/End: Complemental strand, 44890823 - 44890658
Alignment:
Q  74 catatttaaacatattattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaata 173  Q
    ||||||||||  |||||||||||| ||||| |||||||| ||  |||||| | | || |||  ||||| | |||||| | |||| |||||||||||||||    
T  44890823 catatttaaatgtattattataaattagaactgaaatataatataatatagattaaagttttctaaaacttcatgttaaatatcgaaagagagtttaata 44890724  T
Q  174 taactgatatattagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    | | |||| |||||  |||||||||||||||| |||  |||||||| |||||||||||||||||||    
T  44890723 tcattgatctattatctcgctagtctatttaaccttgaatcacattacttatttaaagatgttcat 44890658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 74 - 237
Target Start/End: Original strand, 33458569 - 33458732
Alignment:
Q  74 catatttaaacatattattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaata 173  Q
    ||||||||||  ||||||||||||||||||||||||| ||||  | ||| || |||| ||   || |||| |||||| | || ||||||| ||||||||     
T  33458569 catatttaaatgtattattataaactagaattgaaatttgatatagtatttaatcaagttctctataaattcatgttaaataccaaaagaaagtttaatt 33458668  T
Q  174 taactgatatattagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttc 237  Q
    |   |||||||||||||| ||||||| |||||||||| |||||||| ||| |||||| ||||||    
T  33458669 tcgttgatatattagttcactagtctctttaaacttaaatcacattacttctttaaaaatgttc 33458732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 31133080 - 31132978
Alignment:
Q  137 taaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctatttaaacttagatcacattgcttatttaaagatgtt 236  Q
    ||||||| |||||| | ||  ||||||||||||||| | | |||| |||||||| | |||| ||||||||||||||||||||| ||||||||||||||||    
T  31133080 taaaaattcatgttaaatacaaaaagagagtttaatctcattgatctattagtttgatagtatatttaaacttagatcacattacttatttaaagatgtt 31132981  T
Q  237 cat 239  Q
    |||    
T  31132980 cat 31132978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 118 - 215
Target Start/End: Complemental strand, 29719449 - 29719350
Alignment:
Q  118 aatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaat--ataactgatatattagttcgctagtctatttaaacttagatca 215  Q
    ||||||||||| | |||| ||||||   ||||||||||||| |||||||||||||  |||| ||||||||||||||||||||||||  ||||||||||||    
T  29719449 aatatatagtccactttcctaaaaacgtatgttgattatcataagagagtttaatctataattgatatattagttcgctagtctatgcaaacttagatca 29719350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 233
Target Start/End: Original strand, 43946648 - 43946781
Alignment:
Q  102 aattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctat 201  Q
    ||||||||||| ||  ||||||||||||||||   ||||||| ||| || | | ||||||  ||||||||| | | |||| |||||||| |  |||||||    
T  43946648 aattgaaatattatgtaatatatagtcaaattctctaaaaattcatattaaatgtcaaaatggagtttaatgttattgatttattagtttgtcagtctat 43946747  T
Q  202 ttaaacttagat--cacattgcttatttaaagat 233  Q
    ||||||||| ||  |||||| |||||||||||||    
T  43946748 ttaaacttaaatcacacattacttatttaaagat 43946781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 239
Target Start/End: Original strand, 27483386 - 27483447
Alignment:
Q  178 tgatatattagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    |||| |||||| || ||||||||||||| |||| |||||||| |||||||||| ||||||||    
T  27483386 tgatctattagctcactagtctatttaatcttaaatcacattacttatttaaatatgttcat 27483447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 45613099 - 45613147
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagcttatt 50  Q
    ||||||||| ||||||||||| ||||||||||| ||||| |||||||||    
T  45613099 ttgaattaaaataaaaatttgataactttttcagtaatttaagcttatt 45613147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 238
Target Start/End: Complemental strand, 43242142 - 43242041
Alignment:
Q  136 ttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctatttaaacttagatcacattgcttatttaaagatgt 235  Q
    |||||||  |||||| | ||||||||| ||| |||||   | |||| ||||||||  ||| ||||||||||||||||||||| | |||||||||| ||||    
T  43242142 ttaaaaactcatgttaaatatcaaaagggagattaatcacattgatctattagttt-ctaatctatttaaacttagatcacactacttatttaaacatgt 43242044  T
Q  236 tca 238  Q
    |||    
T  43242043 tca 43242041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 124
Target Start/End: Complemental strand, 52426463 - 52426413
Alignment:
Q  74 catatttaaacatattattataaactagaattgaaatatgatcaaatatat 124  Q
    ||||||||||  |||||||||||| |||||||||||||||||  |||||||    
T  52426463 catatttaaatgtattattataaattagaattgaaatatgatataatatat 52426413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 43464389 - 43464437
Alignment:
Q  5 aattaacataaaaatttgttaactttttcaataattcaagcttattagt 53  Q
    |||||| |||||||| |||||||| ||||| ||||| ||||||||||||    
T  43464389 aattaaaataaaaatatgttaactgtttcagtaatttaagcttattagt 43464437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 150
Target Start/End: Original strand, 44045685 - 44045761
Alignment:
Q  74 catatttaaacatattattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgtt 150  Q
    ||||||||||   |||||||||||||| ||||||||||||||  ||||||||  ||||||  |||| ||| ||||||    
T  44045685 catatttaaatgaattattataaactataattgaaatatgatataatatatatccaaattctttaataattcatgtt 44045761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 46351497 - 46351465
Alignment:
Q  80 taaacatattattataaactagaattgaaatat 112  Q
    |||| ||||||||||||||||||||||||||||    
T  46351497 taaatatattattataaactagaattgaaatat 46351465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 114; Significance: 6e-58; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 2 - 239
Target Start/End: Complemental strand, 9479518 - 9479286
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaannnnnnnncttcatatttaaacatattattataaactag 101  Q
    ||||||||| |||||||||| | |||||||||||||| | |||||||||||||||||||||         ||||| ||||||  ||||||||||||||||    
T  9479518 ttgaattaaaataaaaatttatcaactttttcaataagttaagcttattagtatacattaatttt-----ttcatgtttaaatgtattattataaactag 9479424  T
Q  102 aattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctat 201  Q
    ||||||||||||||   ||||||||||||||| ||||||||| || |||||||||||||||||| |||||  ||| ||||||||||||  ||||||||||    
T  9479423 aattgaaatatgatacgatatatagtcaaattccttaaaaattcacgttgattatcaaaagagaatttaaactaattgatatattagtcagctagtctat 9479324  T
Q  202 ttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    |||||| |||||| ||||||||||||||| ||||||||    
T  9479323 ttaaacatagatcgcattgcttatttaaatatgttcat 9479286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 2 - 236
Target Start/End: Complemental strand, 42672993 - 42672763
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaannnnnnnncttcatatttaaacatattattataaactag 101  Q
    ||||||||| |||||||| |||||||| ||||| ||||| | | |||||||| ||||||||         | |||||||| |  ||||||||||||||||    
T  42672993 ttgaattaaaataaaaatatgttaactgtttcagtaatttatgtttattagtctacattaattttt----tgcatatttatatgtattattataaactag 42672898  T
Q  102 aattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctat 201  Q
    ||||||||| ||||  ||||||||||||||||  |||||| | |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  42672897 aattgaaatgtgatacaatatatagtcaaattctttaaaatttcatgttgattatcaaaagagagtttaatctaattgatatattagttcgctagtctat 42672798  T
Q  202 ttaaacttagatcacattgcttatttaaagatgtt 236  Q
    ||||||||| |||||||||||||||| ||||||||    
T  42672797 ttaaacttatatcacattgcttattttaagatgtt 42672763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 2 - 239
Target Start/End: Complemental strand, 25685526 - 25685293
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaannnnnnnncttcatatttaaacatattattataaactag 101  Q
    ||||||||| |||||||| |||||||| ||||| ||||| ||| |||||||| |||| |||         | |||||||| |  ||||||||||||||||    
T  25685526 ttgaattaaaataaaaatatgttaactgtttcagtaatttaagtttattagtctacactaattttt----tgcatatttatatgtattattataaactag 25685431  T
Q  102 aattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctat 201  Q
    ||||||||| ||||  |||||||||||||||| | |||||||  ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  25685430 aattgaaatctgatacaatatatagtcaaattccctaaaaatttatgttgattatcaaaagagagtttaatctaattgatatattagttcgctagtctat 25685331  T
Q  202 ttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    |||||||||||||| |||||||||||||| || |||||    
T  25685330 ttaaacttagatcatattgcttatttaaatatattcat 25685293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 2 - 239
Target Start/End: Complemental strand, 39727470 - 39727237
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaannnnnnnncttcatatttaaacatattattataaactag 101  Q
    ||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||  ||||         | ||| ||||||  |||||||||||||||     
T  39727470 ttgaattaaaataaaaatttgttaactttttcaataatttaagtttattagtatatgttaattttt----tgcatgtttaaatgtattattataaactat 39727375  T
Q  102 aattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctat 201  Q
    ||||||||||||||  |||||||||||||||| | ||||| | ||| ||||||||||||||||| |||||| ||| ||||||||||||||||||||||||    
T  39727374 aattgaaatatgatacaatatatagtcaaattccctaaaagttcatcttgattatcaaaagagaatttaatctaattgatatattagttcgctagtctat 39727275  T
Q  202 ttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    |||||||||||| |||||||| ||||||| ||| ||||    
T  39727274 ttaaacttagataacattgctcatttaaatatgctcat 39727237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 12 - 239
Target Start/End: Complemental strand, 9271371 - 9271148
Alignment:
Q  12 ataaaaatttgttaactttttcaataattcaagcttattagtatacattaannnnnnnncttcatatttaaacatattattataaactagaattgaaata 111  Q
    ||||||||||||||||||||||| ||||| |||| ||||||||||||||||         |  |||||||||  |||||||| |||| |||||||| |||    
T  9271371 ataaaaatttgttaactttttcagtaatttaagcctattagtatacattaattatt----tgtatatttaaatgtattattaaaaacaagaattgagata 9271276  T
Q  112 tgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctatttaaacttag 211  Q
     |||  |||||||||||||||||| ||||||  ||||||||||||||||||||| |||||| ||| | |||| ||||||||||||||||||||||| |||    
T  9271275 cgatacaatatatagtcaaatttcctaaaaactcatgttgattatcaaaagagattttaatctaattaatattttagttcgctagtctatttaaacctag 9271176  T
Q  212 atcacattgcttatttaaagatgttcat 239  Q
    ||||||||||||||||||||||||||||    
T  9271175 atcacattgcttatttaaagatgttcat 9271148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 86 - 239
Target Start/End: Original strand, 32555703 - 32555856
Alignment:
Q  86 tattattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatat 185  Q
    ||||||||||||||||||||||||| ||||  |||||||||||||||| | ||||||| |||||||||||||||||||||||| ||| ||| ||||||||    
T  32555703 tattattataaactagaattgaaatctgatacaatatatagtcaaattccctaaaaattcatgttgattatcaaaagagagttaaatctaattgatatat 32555802  T
Q  186 tagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    | |||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  32555803 ttgttcactagtctatttaaacttagatcacattgcttatttaaaaatgttcat 32555856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 2 - 239
Target Start/End: Original strand, 18330670 - 18330903
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaannnnnnnncttcatatttaaacatattattataaactag 101  Q
    ||||||||| ||| ||||||||||||||||||||||||| ||| |||||||||||||||||           ||||| ||||  ||||||||||||||||    
T  18330670 ttgaattaaaatataaatttgttaactttttcaataatttaaggttattagtatacattaatttttcg----catatataaatgtattattataaactag 18330765  T
Q  102 aattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctat 201  Q
    ||||||||||||||  |||||||||||||||| | ||||||  ||||||||||||||||||| ||| |||| ||| |||| |||| ||| |||  |||||    
T  18330766 aattgaaatatgatacaatatatagtcaaattccgtaaaaactcatgttgattatcaaaagatagtataatctaattgatttattggttggctgatctat 18330865  T
Q  202 ttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    ||||||||| ||||||||| ||||||||||||||||||    
T  18330866 ttaaacttatatcacattgtttatttaaagatgttcat 18330903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 2 - 236
Target Start/End: Complemental strand, 32420586 - 32420356
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaannnnnnnncttcatatttaaacatattattataaactag 101  Q
    |||||| || ||||||||||||||||||||  | ||||| |||||||||||||||||||||         | ||||||||||  | ||||||||||||||    
T  32420586 ttgaatcaaaataaaaatttgttaacttttatagtaatttaagcttattagtatacattaattttt----tgcatatttaaatgttttattataaactag 32420491  T
Q  102 aattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctat 201  Q
    ||||||||||||    ||||||||||||| |||| |||||   ||||||||||||||||||||||||||||  || ||||||||||||| |||||| | |    
T  32420490 aattgaaatatggaacaatatatagtcaactttcctaaaatctcatgttgattatcaaaagagagtttaatccaattgatatattagtttgctagtttgt 32420391  T
Q  202 ttaaacttagatcacattgcttatttaaagatgtt 236  Q
    ||||||||||||||||||||||||||||| |||||    
T  32420390 ttaaacttagatcacattgcttatttaaaaatgtt 32420356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 2 - 239
Target Start/End: Original strand, 41015688 - 41015922
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaannnnnnnncttcatatttaaacatattattataaactag 101  Q
    ||||||||| |||||||| |||||||||||| | ||||| || ||||||||||||||||||         ||||||||||||  ||||||| |||||||     
T  41015688 ttgaattaaaataaaaatgtgttaacttttttagtaatttaaacttattagtatacattaattttttt--ttcatatttaaatgtattattgtaaactat 41015785  T
Q  102 aattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctat 201  Q
    |||||||||| |||  |||||||||||||||||   |||||  |||||||| ||||||||||| | ||||| ||| ||||||||||||||| ||||||||    
T  41015786 aattgaaatacgatacaatatatagtcaaattttccaaaaactcatgttgaatatcaaaagagtgattaatttaattgatatattagttcgttagtctat 41015885  T
Q  202 ttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    ||||||||||||||||||||| |  |||||||||||||    
T  41015886 ttaaacttagatcacattgctga-ctaaagatgttcat 41015922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 2 - 238
Target Start/End: Original strand, 28031864 - 28032096
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaannnnnnnncttcatatttaaacatattattataaactag 101  Q
    ||||||||| |||||||||| |||| |||| || ||||| ||| |||||||||| ||||||         || |||||||||  ||||||||||||||||    
T  28031864 ttgaattaaaataaaaatttattaagttttccagtaatttaagtttattagtatgcattaatcttt----tttatatttaaatgtattattataaactag 28031959  T
Q  102 aattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctat 201  Q
    ||||||||||||||  |||||||||||||||||| ||||||  |||||||||||||||||||  ||||||| | | | ||||| || || | ||||| ||    
T  28031960 aattgaaatatgatacaatatatagtcaaatttcctaaaaactcatgttgattatcaaaagattgtttaatctgattcatataataatttgatagtcaat 28032059  T
Q  202 ttaaacttagatcacattgcttatttaaagatgttca 238  Q
    ||||||||||| |||||||||||||||||||||||||    
T  28032060 ttaaacttagaacacattgcttatttaaagatgttca 28032096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 2 - 239
Target Start/End: Original strand, 40727024 - 40727257
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagctt-attagtatacattaannnnnnnncttcatatttaaacatattattataaacta 100  Q
    ||||||||| ||| |||||||| ||| |||||||||||| |||||| ||||||||||||||          |  |||| ||||  |||||||||||||||    
T  40727024 ttgaattaaaatataaatttgtaaaccttttcaataatttaagctttattagtatacattatttttt----taaatatataaatgtattattataaacta 40727119  T
Q  101 gaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtcta 200  Q
     ||| ||||||||||  |||| |||||| |||||| ||||  ||  |||||||||||||||||||||||||| ||| |||  |||||||||| ||||| |    
T  40727120 aaatagaaatatgatacaataaatagtcgaatttcctaaacctcg-tgttgattatcaaaagagagtttaatttaattgaactattagttcgttagtcca 40727218  T
Q  201 tttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    |||||||||||||||||||||||||||||||||||||||    
T  40727219 tttaaacttagatcacattgcttatttaaagatgttcat 40727257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 121 - 239
Target Start/End: Complemental strand, 5034210 - 5034092
Alignment:
Q  121 atatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctatttaaacttagatcacattg 220  Q
    |||||||||||||  |||||||  | |||||||||||||||||||||||||  ||| |||| ||||||||||||||||||||||||||| ||||||||||    
T  5034210 atatagtcaaattctttaaaaactcgtgttgattatcaaaagagagtttaacctaattgatctattagttcgctagtctatttaaactttgatcacattg 5034111  T
Q  221 cttatttaaagatgttcat 239  Q
    |||||||||| ||||||||    
T  5034110 cttatttaaatatgttcat 5034092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 86 - 239
Target Start/End: Original strand, 21144466 - 21144619
Alignment:
Q  86 tattattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatat 185  Q
    ||||||||||||||| ||||||||||||||  ||||||||||| |||| | | |||   |||||||| |||||||| |||||||||| ||| |||| |||    
T  21144466 tattattataaactataattgaaatatgatacaatatatagtcgaattccctgaaacctcatgttgactatcaaaatagagtttaatctaattgatctat 21144565  T
Q  186 tagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    |||||| |||||||||||||||||| ||||||||   |||||||||||||||||    
T  21144566 tagttcactagtctatttaaacttatatcacattaagtatttaaagatgttcat 21144619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 239
Target Start/End: Original strand, 41937647 - 41937881
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagctt-attagtatacattaannnnnnnncttcatatttaaacatattattataaacta 100  Q
    ||||||||| ||| |||||||| |||||||||||||||| |||||| |||||||||||||||         | ||||| ||||  |||||||||||||||    
T  41937647 ttgaattaaaatataaatttgtaaactttttcaataatttaagctttattagtatacattaatttat----tgcatatataaatgtattattataaacta 41937742  T
Q  101 gaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtcta 200  Q
     |||  |||||||||  |||||| |||| ||||   |||||  || |||||| |||||||| | |||||||||||| |||  |||||| || ||||||||    
T  41937743 caatgaaaatatgatacaatatacagtcgaattctctaaaatcccgtgttgactatcaaaatatagtttaatataattgaactattagatctctagtcta 41937842  T
Q  201 tttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    |||||||||| ||| ||||| ||||||||||||||||||    
T  41937843 tttaaacttaaatcgcattgtttatttaaagatgttcat 41937881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 77 - 230
Target Start/End: Original strand, 34653861 - 34654015
Alignment:
Q  77 atttaaacatattattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatc-catgttgattatcaaaagagagtttaatata 175  Q
    |||||||  ||| |||||||| |||| || |||||||||  ||||||||||||| ||| |||||||   | | || | || |||||||||||||||| |     
T  34653861 atttaaatttatcattataaattagagttaaaatatgatataatatatagtcaagttttttaaaaaaatcgtattaagtaacaaaagagagtttaatctc 34653960  T
Q  176 actgatatattagttcgctagtctatttaaacttagatcacattgcttatttaaa 230  Q
    | ||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  34653961 attgatatattagttcgctagtctatttaaaattagatcacattacttatttaaa 34654015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 86 - 239
Target Start/End: Original strand, 42766552 - 42766704
Alignment:
Q  86 tattattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatat 185  Q
    ||||||||||||||||| ||||||||||||  || |||||   |||||  |||||||| |||||| | ||||||| ||||| ||||| | | |||||||     
T  42766552 tattattataaactaga-ttgaaatatgatataaaatataacgaaattctttaaaaattcatgttaaatatcaaaggagagattaatctcattgatataa 42766650  T
Q  186 tagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    |||||||||||||||||||| |||||||||  || ||||||||||||| |||||    
T  42766651 tagttcgctagtctatttaaccttagatcaatttacttatttaaagatattcat 42766704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 74 - 172
Target Start/End: Complemental strand, 18793807 - 18793709
Alignment:
Q  74 catatttaaacatattattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaat 172  Q
    ||||||||||  |||||||||| |||||||||||||||||||  ||||||||||||||||   ||||||| |||||| | |||||||||||||||||||    
T  18793807 catatttaaatgtattattatacactagaattgaaatatgatataatatatagtcaaattctctaaaaattcatgttaaatatcaaaagagagtttaat 18793709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 205
Target Start/End: Original strand, 18879544 - 18879741
Alignment:
Q  5 aattaacataaaaatttgttaactttttcaataattcaagctt-attagtatacattaannnnnnnncttcatatttaaacatattattataaactagaa 103  Q
    |||||| ||| |||||||| |||||||||||||||| |||||| |||||||||||||||         | ||||| ||||  |||||||||||| || ||    
T  18879544 aattaaaatataaatttgtaaactttttcaataatttaagctttattagtatacattaaatttt----tgcatatataaatgtattattataaattaaaa 18879639  T
Q  104 ttgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctattt 203  Q
    | ||||||||||  ||| ||||||| |||||| |||||   ||| |||||||||||| ||||||||||| ||| |||  |||||||||| ||||| ||||    
T  18879640 tagaaatatgatacaatttatagtcgaatttcctaaaacctcatattgattatcaaaggagagtttaatttaattgaactattagttcgttagtccattt 18879739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 74 - 237
Target Start/End: Original strand, 37155528 - 37155690
Alignment:
Q  74 catatttaaacatattattataaactagaattgaaatatgatcaaatatatagtcaaatttct-taaaaatccatgttgattatcaaaagagagtttaat 172  Q
    ||||||||||| |||||||||||| ||||||||| |||||||  || ||||||| ||| |||| ||||| | ||| || | |||| ||||||| ||||||    
T  37155528 catatttaaacgtattattataaattagaattgagatatgatataacatatagt-aaagttctctaaaacttcatattaaatatcgaaagagaatttaat 37155626  T
Q  173 ataactgatatattagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttc 237  Q
    || | |||| |||||| ||| |||||||||||| ||| ||||| ||| |||||||||||||||||    
T  37155627 atca-tgatctattagctcgttagtctatttaaccttggatcatattacttatttaaagatgttc 37155690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 184
Target Start/End: Complemental strand, 38175922 - 38175744
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaannnnnnnncttcatatttaaacatattattataaactag 101  Q
    ||||||||| ||| ||||||||||||||||| | ||||| || ||||||||||||||||||           ||||| ||||  |||||| ||||| |||    
T  38175922 ttgaattaaaatataaatttgttaacttttttattaatttaaacttattagtatacattaatatttca----catatataaatgtattatcataaagtag 38175827  T
Q  102 aattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatata 184  Q
    ||||||||||||||  ||||| ||||||||||   |||||   ||||||||||||||||||| |||||||| ||| |||||||    
T  38175826 aattgaaatatgatacaatatgtagtcaaattctctaaaagctcatgttgattatcaaaagatagtttaatctaattgatata 38175744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 74 - 239
Target Start/End: Complemental strand, 25072851 - 25072685
Alignment:
Q  74 catatttaaacatattattataaactagaattgaaatatgatcaaatatatagtcaaatttct-taaaaatccat-gttgattatcaaaagagagtttaa 171  Q
    ||||||||||  |||||||||||| ||||||||||| |||||  |||||||| | ||| |||| ||||| | ||| ||| | || | |||||||||||||    
T  25072851 catatttaaatgtattattataaattagaattgaaagatgatataatatataat-aaagttctctaaaacttcattgttaaataccgaaagagagtttaa 25072753  T
Q  172 tataactgatatattagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    ||| | |||| |||||| ||| |||||||||||| |||  |||||||| |||||||||||||||||||    
T  25072752 tatcattgatctattagctcgttagtctatttaaccttgaatcacattacttatttaaagatgttcat 25072685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 86 - 236
Target Start/End: Original strand, 22165974 - 22166129
Alignment:
Q  86 tattattataaactagaattgaaatatgatcaa--atatatagtcaaatt-tcttaaaaatccatgttgattatcaaaaga--gagtttaatataactga 180  Q
    ||||||||||||||||||||||||||||||  |  ||||||| ||||||| ||| |||||| | |||| | ||| |||| |  ||||||||| ||| |||    
T  22165974 tattattataaactagaattgaaatatgatatataatatataatcaaattctctaaaaaattcttgttaaatataaaaaaaatgagtttaatttaattga 22166073  T
Q  181 tatattagttcgctagtctatttaaacttagatcacattgcttatttaaagatgtt 236  Q
    | |||||||||| ||||  ||| ||||||| ||||||||  |||||||||||||||    
T  22166074 tctattagttcgttagttgattaaaacttaaatcacattatttatttaaagatgtt 22166129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 86 - 236
Target Start/End: Original strand, 22224681 - 22224836
Alignment:
Q  86 tattattataaactagaattgaaatatgatcaa--atatatagtcaaatt-tcttaaaaatccatgttgattatcaaaaga--gagtttaatataactga 180  Q
    ||||||||||||||||||||||||||||||  |  ||||||| ||||||| ||| |||||| | |||| | ||| |||| |  ||||||||| ||| |||    
T  22224681 tattattataaactagaattgaaatatgatatataatatataatcaaattctctaaaaaattcttgttaaatataaaaaaaatgagtttaatttaattga 22224780  T
Q  181 tatattagttcgctagtctatttaaacttagatcacattgcttatttaaagatgtt 236  Q
    | |||||||||| ||||  ||| ||||||| ||||||||  |||||||||||||||    
T  22224781 tctattagttcgttagttgattaaaacttaaatcacattatttatttaaagatgtt 22224836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 215
Target Start/End: Original strand, 44736595 - 44736735
Alignment:
Q  75 atatttaaacatattattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatat 174  Q
    |||||||||  ||||||||||||  | ||||||||||||||  ||||||| || || |||  ||||| | |||||| | ||||||||||||||||||||     
T  44736595 atatttaaatgtattattataaataataattgaaatatgatagaatatatggtaaagttttataaaatttcatgttaaatatcaaaagagagtttaatac 44736694  T
Q  175 aactgatatattagttcgctagtctatttaaacttagatca 215  Q
     | |||| ||||| || ||| |||||||||| |||||||||    
T  44736695 cattgatctattaatttgctcgtctatttaatcttagatca 44736735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 75 - 229
Target Start/End: Complemental strand, 38566782 - 38566627
Alignment:
Q  75 atatttaaacatattattataaactagaa-ttgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaata 173  Q
    |||||||||  || |||||||||||| || ||||||||||||  ||||| ||||||| ||    |||||| |||||| | |||||||||||||||||||     
T  38566782 atatttaaatgtaatattataaactataaattgaaatatgatataatatgtagtcaagttctccaaaaattcatgttaagtatcaaaagagagtttaatc 38566683  T
Q  174 taactgatatattagttcgctagtctatttaaacttagatcacattgcttatttaa 229  Q
    | | |||| |||||||| |  | |||||||||| |||||||||| | |||||||||    
T  38566682 tcattgatctattagttagacaatctatttaaatttagatcacaatacttatttaa 38566627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 74 - 232
Target Start/End: Complemental strand, 32684396 - 32684236
Alignment:
Q  74 catatttaaacatattattataaactagaattgaaatatgatcaaatatatagtcaaatttctt--aaaaatccatgttgattatcaaaagagagtttaa 171  Q
    ||||||||||  || |||||||||||||||||||||||||||  |||| |||||| |||||  |  |||||  ||| || | ||||||||| ||||||||    
T  32684396 catatttaaatgtaatattataaactagaattgaaatatgatagaatacatagtcgaattttctaaaaaaaatcatatttaatatcaaaagggagtttaa 32684297  T
Q  172 tataactgatatattagttcgctagtctatttaaacttagatcacattgcttatttaaaga 232  Q
    | |   |||| |||| | | | ||||||||||||| ||||||||||||  |||||||||||    
T  32684296 tctcgttgatctatttgcttgttagtctatttaaatttagatcacattatttatttaaaga 32684236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 86 - 230
Target Start/End: Original strand, 42808948 - 42809091
Alignment:
Q  86 tattattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatat 185  Q
    |||||||||||| |||| ||||||||||||  ||||||||   |||||  |||||||| |||||| | ||||||||||||| |||||   | || ||||     
T  42808948 tattattataaattaga-ttgaaatatgatataatatataacgaaattctttaaaaattcatgttaaatatcaaaagagagattaatcccattggtataa 42809046  T
Q  186 tagttcgctagtctatttaaacttagatcacattgcttatttaaa 230  Q
    |||||||  |||| |||||| |||||||||| || ||||||||||    
T  42809047 tagttcgtcagtcaatttaaccttagatcactttacttatttaaa 42809091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 190
Target Start/End: Original strand, 28248880 - 28249065
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaannnnnnnncttcatatttaaacatattattataaactag 101  Q
    ||||||||| ||  |||||||||||| |||||| ||||| ||| |||||||||||||||||           ||||||||||  ||| |||||||||||     
T  28248880 ttgaattaaaatttaaatttgttaaccttttcagtaatttaagtttattagtatacattaatctttca----catatttaaatgtatgattataaacta- 28248974  T
Q  102 aattgaaatatg--atcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagtt 190  Q
    ||||||| ||||  || | ||||||||| || ||  |||||||  |||||| | |||||||| |||||||||| ||| |||| ||||||||    
T  28248975 aattgaagtatgctataatatatatagttaagttctttaaaaactcatgttaaatatcaaaaaagagtttaatctaattgatctattagtt 28249065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 32555646 - 32555693
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagcttat 49  Q
    ||||||||| |||||||| |||||||| ||||| ||||||||||||||    
T  32555646 ttgaattaaaataaaaatatgttaactgtttcagtaattcaagcttat 32555693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 40303336 - 40303373
Alignment:
Q  16 aaatttgttaactttttcaataattcaagcttattagt 53  Q
    |||||||||||||||||||||||||||| | |||||||    
T  40303336 aaatttgttaactttttcaataattcaaacatattagt 40303373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 112
Target Start/End: Complemental strand, 30225822 - 30225782
Alignment:
Q  72 ttcatatttaaacatattattataaactagaattgaaatat 112  Q
    ||||||||||||  |||||||||||| ||||||||||||||    
T  30225822 ttcatatttaaatttattattataaattagaattgaaatat 30225782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 37034484 - 37034432
Alignment:
Q  73 tcatatttaaacatattattataaactagaattgaaatatgatcaaatatata 125  Q
    |||||||||||  |||||||| |||||||||||||||| ||||  ||||||||    
T  37034484 tcatatttaaatgtattattacaaactagaattgaaatttgatataatatata 37034432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 113; Significance: 3e-57; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 2 - 230
Target Start/End: Original strand, 19297953 - 19298177
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaannnnnnnncttcatatttaaacatattattataaactag 101  Q
    ||||||||| |||||| |||||| ||||||||| ||||| |||||||||||||||||||||         | ||||| ||||  ||||||||||||||||    
T  19297953 ttgaattaaaataaaagtttgttgactttttcagtaatttaagcttattagtatacattaactttt----tgcatatataaatgtattattataaactag 19298048  T
Q  102 aattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctat 201  Q
    ||||||||||||    |||||||||||||||||| ||||||  |||||||||||||||||||||||||||| ||  ||||||||||||| | ||||||||    
T  19298049 aattgaaatatggaacaatatatagtcaaatttcctaaaaactcatgttgattatcaaaagagagtttaatctagttgatatattagttaggtagtctat 19298148  T
Q  202 ttaaacttagatcacattgcttatttaaa 230  Q
    |||||||||||||||||||||||||||||    
T  19298149 ttaaacttagatcacattgcttatttaaa 19298177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 86 - 236
Target Start/End: Complemental strand, 42108670 - 42108520
Alignment:
Q  86 tattattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatat 185  Q
    ||||||||||||||||||||||||| ||||  |||||||||||||||| | ||||||| |||||||||||||||||||||||||||| ||| ||||||||    
T  42108670 tattattataaactagaattgaaatctgatacaatatatagtcaaattccctaaaaattcatgttgattatcaaaagagagtttaatctaattgatatat 42108571  T
Q  186 tagttcgctagtctatttaaacttagatcacattgcttatttaaagatgtt 236  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  42108570 tagttcgctagtctatttaaacttggatcatattgcttatttaaagatgtt 42108520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 2 - 239
Target Start/End: Original strand, 6391335 - 6391567
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaannnnnnnncttcatatttaaacatattattataaactag 101  Q
    ||||||||| ||||| ||| ||||||||||||| ||||| |||||||||| ||| ||||||         |  |||||||||  ||||| ||||||||||    
T  6391335 ttgaattaaaataaacattcgttaactttttcagtaatttaagcttattaatatgcattaattttt----tgtatatttaaatgtattactataaactag 6391430  T
Q  102 aattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctat 201  Q
    ||||||||||||||  ||||||||||||| || | ||||||  || |||||||||||||| |||||||||| ||| ||||||||||||||||||||||||    
T  6391431 aattgaaatatgatacaatatatagtcaa-ttccctaaaaactcaagttgattatcaaaatagagtttaatctaattgatatattagttcgctagtctat 6391529  T
Q  202 ttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    ||||||||||||||||||||||||||||||||||||||    
T  6391530 ttaaacttagatcacattgcttatttaaagatgttcat 6391567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 2 - 239
Target Start/End: Original strand, 11422506 - 11422741
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaannnnnnnncttcatatttaaacatattattataaactag 101  Q
    ||||||||| ||||||||||||||||||||| | ||||| ||| |||||||||| |||||          | ||||||||||| ||||||||||||| ||    
T  11422506 ttgaattaaaataaaaatttgttaactttttgagtaatttaagtttattagtatgcattagttttttt--tgcatatttaaacgtattattataaacaag 11422603  T
Q  102 aattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctat 201  Q
    ||||||||||||||  |||||||| ||||||||| ||||||  ||||||||||||||||||| |||||||| ||| |||||||| | ||||||| |||||    
T  11422604 aattgaaatatgatacaatatatattcaaatttcctaaaaactcatgttgattatcaaaagatagtttaatctaattgatatataaattcgctaatctat 11422703  T
Q  202 ttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    |||||||||||||||| |||||||||||| ||||||||    
T  11422704 ttaaacttagatcacaatgcttatttaaaaatgttcat 11422741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 2 - 236
Target Start/End: Original strand, 40201718 - 40201950
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaannnnnnnncttcatatttaaacatattattataaactag 101  Q
    ||||||||| |||||| |||||||||||||||  ||||| ||||||||||||||||||||          |  |||||||||  ||||||||||||||||    
T  40201718 ttgaattaaaataaaagtttgttaactttttcggtaatttaagcttattagtatacattattattttt--tgaatatttaaatgtattattataaactag 40201815  T
Q  102 aattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctat 201  Q
    ||||||||||||||  |||||||||||||||| | |||| |   || |||||||||||||||||||| ||| ||| ||||||||||||| ||||||||||    
T  40201816 aattgaaatatgatacaatatatagtcaaattccctaaagacttatcttgattatcaaaagagagttcaatctaattgatatattagtttgctagtctat 40201915  T
Q  202 ttaaacttagatcacattgcttatttaaagatgtt 236  Q
    ||||||||||||||||||||||||| |||||||||    
T  40201916 ttaaacttagatcacattgcttattaaaagatgtt 40201950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 75 - 239
Target Start/End: Original strand, 41386889 - 41387053
Alignment:
Q  75 atatttaaacatattattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatat 174  Q
    ||||||||| |||||||||||||||||| ||||||||||||  |||| |||||||||||  |||||||  ||| ||||||||||||||||||||| || |    
T  41386889 atatttaaatatattattataaactagacttgaaatatgatacaatacatagtcaaattcattaaaaactcatattgattatcaaaagagagtttgatct 41386988  T
Q  175 aactgatatattagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    || ||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||    
T  41386989 aattgatatattagttcgctagtctatttaaacttatatcactttgcttatataaagatgttcat 41387053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 74 - 236
Target Start/End: Complemental strand, 36440079 - 36439917
Alignment:
Q  74 catatttaaacatattattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaata 173  Q
    ||||||||||  |||||||||||| |||||||||||||||||  |||||||| |||||||   ||||||  ||||||||||||||||||||||||||||     
T  36440079 catatttaaatgtattattataaagtagaattgaaatatgatacaatatataatcaaattctctaaaaagtcatgttgattatcaaaagagagtttaatc 36439980  T
Q  174 taactgatatattagttcgctagtctatttaaacttagatcacattgcttatttaaagatgtt 236  Q
    ||  ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  36439979 tatttgatatattagttcgttagtctatttaaacttagataacattgcttatttaaagatgtt 36439917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 2 - 237
Target Start/End: Complemental strand, 32907052 - 32906822
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaannnnnnnncttcatatttaaacatattattataaactag 101  Q
    ||||||||| ||| ||||||||||||||||||||||||| ||| |||||||||||||||||           |||||  |||  ||||||||||||||||    
T  32907052 ttgaattaaaatataaatttgttaactttttcaataatttaagtttattagtatacattaatttttcg----catataaaaatgtattattataaactag 32906957  T
Q  102 aattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctat 201  Q
    ||||||||||||||  |||||||||||||||| | ||||||  ||||| ||||||||||||| ||||||||  || |||| || ||||||||||| ||||    
T  32906956 aattgaaatatgatacaatatatagtcaaattccgtaaaaactcatgtcgattatcaaaagatagtttaattaaattgatcta-tagttcgctagcctat 32906858  T
Q  202 ttaaacttagatcacattgcttatttaaagatgttc 237  Q
    ||||||||| ||||||||| ||||||||||||||||    
T  32906857 ttaaacttatatcacattgtttatttaaagatgttc 32906822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 75 - 239
Target Start/End: Complemental strand, 38876788 - 38876623
Alignment:
Q  75 atatttaaacatattattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatat 174  Q
    |||||||||  ||||||||||||||||||||||||||||||  |||||||||||||||||  ||||||  ||||||||||||||||| |||||||||| |    
T  38876788 atatttaaatgtattattataaactagaattgaaatatgatacaatatatagtcaaattttctaaaaactcatgttgattatcaaaaaagagtttaatct 38876689  T
Q  175 aactgat-atattagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    || |||| ||||||||| ||| ||||||||||||||||||| ||||| ||||||||||||||||||    
T  38876688 aattgataatattagtttgctggtctatttaaacttagatctcattgtttatttaaagatgttcat 38876623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 86 - 239
Target Start/End: Original strand, 12580082 - 12580235
Alignment:
Q  86 tattattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatat 185  Q
    |||||||||||||||||||  |||||||||  ||||||||||| || | | ||||| | | |||||||||||||||||||||||||| ||| |||  |||    
T  12580082 tattattataaactagaataaaaatatgatacaatatatagtcgaactccctaaaacttcgtgttgattatcaaaagagagtttaatctaattgaactat 12580181  T
Q  186 tagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  12580182 tagttcgctagtccatttaaacttagatcacattgcttatttaaagatgttcat 12580235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 86 - 241
Target Start/End: Complemental strand, 35319450 - 35319295
Alignment:
Q  86 tattattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatat 185  Q
    |||||||||||| |||||||||||| ||||  |||| |||| |||||  | | ||||| ||||||||||||||||||||| |||||| ||| ||||||||    
T  35319450 tattattataaagtagaattgaaatctgatacaataaatagccaaataccctgaaaattcatgttgattatcaaaagagactttaatctaattgatatat 35319351  T
Q  186 tagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcatct 241  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  35319350 tagttccctagtctatttaaacttagatcacattgcttatttaaatatgtttatct 35319295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 2 - 239
Target Start/End: Complemental strand, 40515001 - 40514765
Alignment:
Q  2 ttgaattaacataaaaatttgttaactt-tttcaataattcaagcttattagtatacattaannnnnnnncttcatatttaaacatattattataaacta 100  Q
    ||||||||| |||||||||||||||||| ||| |  |||| |||||| ||||| ||||||||         | ||||||||||  |||||||||||||||    
T  40515001 ttgaattaaaataaaaatttgttaacttgttttagaaatttaagcttgttagtgtacattaattttt----tgcatatttaaatgtattattataaacta 40514906  T
Q  101 gaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtcta 200  Q
    ||||||||||||| |  ||||||||||||| || | ||||||   ||||||||||||| ||||||||||||| ||| |||||||||| ||||||||| ||    
T  40514905 gaattgaaatatggtacaatatatagtcaacttccctaaaaactgatgttgattatcataagagagtttaatctaattgatatattacttcgctagtata 40514806  T
Q  201 tttaaactt--agatcacattgcttatttaaagatgttcat 239  Q
    |||||||||  | ||||||||| ||||||||||||||||||    
T  40514805 tttaaacttaaatatcacattgtttatttaaagatgttcat 40514765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 12 - 239
Target Start/End: Original strand, 40417239 - 40417467
Alignment:
Q  12 ataaaaatttgttaactttttcaataattcaagcttattagtatacattaannnnnnnncttcatatttaaacatattattataaactagaattgaaata 111  Q
    |||||||||| ||||||||| || ||||| ||||||||||| ||||||||          | ||||||| ||  |||||||||||||||||||| |||||    
T  40417239 ataaaaatttattaacttttacagtaatttaagcttattagcatacattattttattttttgcatattttaaagtattattataaactagaattaaaata 40417338  T
Q  112 tgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagttta-atataactgatatattagttcgctagtctatttaaactta 210  Q
    ||||  ||||| |||| |||||  |||||||  ||||||||||||  |||| ||||||  || ||| |||||||||||||| |||||||||||||||||     
T  40417339 tgatacaatatttagttaaattatttaaaaactcatgttgattatataaagcgagtttttatctaattgatatattagttcactagtctatttaaacttc 40417438  T
Q  211 gatcacattgcttatttaaagatgttcat 239  Q
    |||||||||||||||||||||||||||||    
T  40417439 gatcacattgcttatttaaagatgttcat 40417467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 2 - 239
Target Start/End: Complemental strand, 16885683 - 16885449
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagctt-attagtatacattaannnnnnnncttcatatttaaacatattattataaacta 100  Q
    ||||||||| ||| |||||||| |||||||||||| ||| |||||| |||| | ||||||||         | ||||| ||||  |||||||||||||||    
T  16885683 ttgaattaaaatataaatttgtaaactttttcaattatttaagctttattaatttacattaattttt----tgcatatataaatgtattattataaacta 16885588  T
Q  101 gaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtcta 200  Q
    |||| ||||||||||  ||||||||||||||||   |||||     |||||||||||||||||||||||||| ||| |||  |||||||||||| ||| |    
T  16885587 gaatagaaatatgatacaatatatagtcaaattctctaaaaccttgtgttgattatcaaaagagagtttaatctaattgaactattagttcgctggtcca 16885488  T
Q  201 tttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  16885487 tttaaacttagattacattgcttatttaaagatgttcat 16885449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 86 - 239
Target Start/End: Complemental strand, 15530239 - 15530086
Alignment:
Q  86 tattattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatat 185  Q
    ||||||||||||||||||| ||||||||||  ||||||||||| |||| | |||||   | |||||||||||||||||||||||||| ||| |||  |||    
T  15530239 tattattataaactagaatagaaatatgatacaatatatagtcgaattccctaaaacatcgtgttgattatcaaaagagagtttaatctaattgaactat 15530140  T
Q  186 tagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    |||||||| |||| ||||||| ||||||||||||| ||||||||||||||||||    
T  15530139 tagttcgccagtccatttaaatttagatcacattgtttatttaaagatgttcat 15530086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 86 - 239
Target Start/End: Original strand, 28207286 - 28207439
Alignment:
Q  86 tattattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatat 185  Q
    ||||||||||||||||||| ||||||||||  |||||||  || |||| | |||||   | |||||||||||||||||||||||||| ||| |||  |||    
T  28207286 tattattataaactagaatagaaatatgatacaatatattttcgaattccctaaaacctcgtgttgattatcaaaagagagtttaatttaattgaactat 28207385  T
Q  186 tagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  28207386 tagttcgctagtccatttaaacttagatcacattgcttatttaaaaatgttcat 28207439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 2 - 239
Target Start/End: Complemental strand, 14830828 - 14830594
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagctt-attagtatacattaannnnnnnncttcatatttaaacatattattataaacta 100  Q
    ||||||||| ||| |||||||| |||||||||||||||| | |||| |||||||||||||||         | ||||| ||||  |||||||||||||||    
T  14830828 ttgaattaaaatataaatttgtaaactttttcaataatttatgctttattagtatacattaattttt----tgcatatataaatgtattattataaacta 14830733  T
Q  101 gaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtcta 200  Q
    |||| ||||||||||  ||||||||||| |||| | |||||   | | |||||||| |||||||||||||||  || |||  |||||||| ||||||| |    
T  14830732 gaatagaaatatgatacaatatatagtcgaattccctaaaacctcgtattgattattaaaagagagtttaatccaattgaactattagtttgctagtcca 14830633  T
Q  201 tttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    ||||||||||||||| |||||||| ||||||||||||||    
T  14830632 tttaaacttagatcatattgcttacttaaagatgttcat 14830594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 89 - 239
Target Start/End: Original strand, 16844483 - 16844633
Alignment:
Q  89 tattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattag 188  Q
    |||||||| ||||||| ||||||||||  ||||||||||| || | | |||||   ||||||||||||||||| |||||||||| ||| |||  ||||||    
T  16844483 tattataacctagaatagaaatatgatacaatatatagtcgaactccctaaaatctcatgttgattatcaaaatagagtttaatctaattgaactattag 16844582  T
Q  189 ttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  16844583 ttcgctagtccatttaaacttagatcacatttcttatttaaagatgttcat 16844633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 75 - 239
Target Start/End: Complemental strand, 39981783 - 39981618
Alignment:
Q  75 atatttaaacatattattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagttta-ata 173  Q
    |||||| ||| |||||||||||||||||||| |||||||||  ||||| |||| |||||  |||||||  ||||||||||||  |||| ||||||  ||     
T  39981783 atatttcaacgtattattataaactagaattaaaatatgatacaatatttagttaaattatttaaaaactcatgttgattatataaagcgagtttttatc 39981684  T
Q  174 taactgatatattagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    ||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  39981683 taattgatatattagttcactagtctatttaaacttcgatcacattgcttatttaaatatgttcat 39981618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 74 - 239
Target Start/End: Original strand, 8570185 - 8570352
Alignment:
Q  74 catatttaaacatattattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattat--caaaagagagtttaa 171  Q
    ||||||||||  |||||||||||||| |||||||||||||||  |||||||||||||||| | ||||||  ||||||||||||   |||| | |||||||    
T  8570185 catatttaaatgtattattataaacttgaattgaaatatgatacaatatatagtcaaattccctaaaaactcatgttgattatgaaaaaaaaaagtttaa 8570284  T
Q  172 tataactgatatattagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    | ||| ||||||||||||| | ||||||||||||| |||||||||||| |||||||||| | ||||||    
T  8570285 tctaattgatatattagtttgttagtctatttaaatttagatcacattacttatttaaatacgttcat 8570352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 86 - 239
Target Start/End: Complemental strand, 28022892 - 28022739
Alignment:
Q  86 tattattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatat 185  Q
    |||||||||||| || || |||||||||||  ||| |||| | ||||||  ||||||  |||||| ||||| ||||||||||||||| ||  ||||  ||    
T  28022892 tattattataaattaaaactgaaatatgatacaatttataataaaattttctaaaaactcatgtttattataaaaagagagtttaatctagttgatcaat 28022793  T
Q  186 tagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  28022792 tagttcgctaatctattttaacttagatcacattgcttatttaaagatgttcat 28022739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 74 - 239
Target Start/End: Original strand, 22859615 - 22859780
Alignment:
Q  74 catatttaaacatattattataaactagaattgaaatatgatcaaatatatagtcaaatttct-taaaaatccatgttgattatcaaaagagagtttaat 172  Q
    ||||||||||  |||||||||||| |||||||||||||||||  |||||||||| ||| |||| ||||| | ||| || | |||||||||||||||||||    
T  22859615 catatttaaaactattattataaattagaattgaaatatgatataatatatagt-aaagttctctaaaacttcatattaaatatcaaaagagagtttaat 22859713  T
Q  173 ataactgatatattagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    || | |||| |||||| ||| |||||| ||||| ||| |||||| || |||||||||||||||||||    
T  22859714 atcattgatctattagctcgttagtctttttaaccttggatcaccttacttatttaaagatgttcat 22859780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 86 - 231
Target Start/End: Complemental strand, 333845 - 333700
Alignment:
Q  86 tattattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatat 185  Q
    |||||| ||||||||||||  ||||| | |  |||||||||||||| | | |||||   | |||||||||||||||||||||||||| ||| |||  |||    
T  333845 tattatcataaactagaatataaataaggtgcaatatatagtcaaactccctaaaacctcgtgttgattatcaaaagagagtttaatctaattgaactat 333746  T
Q  186 tagttcgctagtctatttaaacttagatcacattgcttatttaaag 231  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||    
T  333745 tagttcgctagtccatttaaatttagatcacattgcttatttaaag 333700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 136 - 239
Target Start/End: Original strand, 17742919 - 17743022
Alignment:
Q  136 ttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctatttaaacttagatcacattgcttatttaaagatgt 235  Q
    |||||||  ||| |||||||| ||||||||||||||| ||| ||||||||||||| ||||||||||| ||||||| ||||||||||||||  |||||| |    
T  17742919 ttaaaaactcatcttgattattaaaagagagtttaatctaattgatatattagtttgctagtctattgaaacttaaatcacattgcttatcaaaagatat 17743018  T
Q  236 tcat 239  Q
    ||||    
T  17743019 tcat 17743022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 86 - 239
Target Start/End: Complemental strand, 8689257 - 8689105
Alignment:
Q  86 tattattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatat 185  Q
    |||||||||||| |||||||||||| ||||  | |||||||||||||| ||  ||||| |||||| | ||| |||||| ||||| || | | | || |||    
T  8689257 tattattataaattagaattgaaatttgatacattatatagtcaaatt-ctctaaaattcatgttaaatattaaaagaaagttttatcttattcatctat 8689159  T
Q  186 tagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    || || | ||||||||||||||||| |||||||| | |||||||||||||||||    
T  8689158 taatttgatagtctatttaaacttatatcacattacatatttaaagatgttcat 8689105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 150 - 239
Target Start/End: Complemental strand, 39964022 - 39963935
Alignment:
Q  150 tgattatcaaaagagagtttaatataactgatatattagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    |||||||||||||||  |||||| ||  |||| |||||||||| |||||||||||||||||||| | ||| |||||||||||||||||||    
T  39964022 tgattatcaaaagag--tttaatctagttgatttattagttcgttagtctatttaaacttagattatattacttatttaaagatgttcat 39963935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 154 - 239
Target Start/End: Original strand, 2823530 - 2823615
Alignment:
Q  154 tatcaaaagagagtttaatataactgatatattagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    ||||||||||||||||||||| | ||||  ||||||||| |||| ||||||| |||| |||||||| |||||||||  ||||||||    
T  2823530 tatcaaaagagagtttaatatcattgatccattagttcgttagtttatttaaccttatatcacattacttatttaataatgttcat 2823615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 99 - 239
Target Start/End: Complemental strand, 15577970 - 15577829
Alignment:
Q  99 tagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagag-agtttaatataactgatatattagttcgctagt 197  Q
    |||||||||||||||||  ||||||||||||||||   ||||||| |||||| | ||| |||| || |||||||| |   |||  ||||||||  ||||     
T  15577970 tagaattgaaatatgatataatatatagtcaaattctctaaaaattcatgttaaatataaaaaaaggagtttaatcttgttgagttattagttaactaga 15577871  T
Q  198 ctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    ||| |||||||||||||||||| | |||||||| ||||||||    
T  15577870 ctaattaaacttagatcacattacctatttaaaaatgttcat 15577829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 75 - 215
Target Start/End: Complemental strand, 25606369 - 25606228
Alignment:
Q  75 atatttaaacatattattataaactagaattgaaatatgatcaaatatatagtcaaatt-tcttaaaaatccatgttgattatcaaaagagagtttaata 173  Q
    |||||||||  | ||||||||||||||||||||| | ||||  |||||||||||||||| ||| ||| || |||||| | |||||||||||||||| ||     
T  25606369 atatttaaaagtgttattataaactagaattgaattgtgatataatatatagtcaaattatctaaaatattcatgttaaatatcaaaagagagtttgatt 25606270  T
Q  174 taactgatatattagttcgctagtctatttaaacttagatca 215  Q
    |   |||  |||||||| |||| |||||||| |||| |||||    
T  25606269 tcgttgaattattagtttgctattctatttatacttggatca 25606228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 76 - 172
Target Start/End: Complemental strand, 29571248 - 29571153
Alignment:
Q  76 tatttaaacatattattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaat 172  Q
    ||||||||  ||||||||||||||| ||||||||||||||  |||||||||| ||||| | ||||| | |||  | |||||||||||||||||||||    
T  29571248 tatttaaatgtattattataaactacaattgaaatatgatacaatatatagttaaattccctaaaact-catcctaattatcaaaagagagtttaat 29571153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 94 - 172
Target Start/End: Complemental strand, 10623683 - 10623605
Alignment:
Q  94 taaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaat 172  Q
    |||| |||||| ||||||||||  ||||||||||| |||||| |||||   | ||||||||||||||||||||||||||    
T  10623683 taaattagaatagaaatatgatacaatatatagtcgaatttcctaaaatctcgtgttgattatcaaaagagagtttaat 10623605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 239
Target Start/End: Complemental strand, 10918467 - 10918314
Alignment:
Q  86 tattattataaactagaattgaaatatgatcaaatatatagtcaaatttct-taaaaatccatgttgattatcaaaagagagtttaatataactgatata 184  Q
    |||||||||||| |||||||  ||||||||  |||||||||| ||| |||| ||||| |  ||||| | |||| |||||||||||||||| | |||| ||    
T  10918467 tattattataaattagaattataatatgatataatatatagt-aaagttctctaaaactttatgttaaatatcgaaagagagtttaatattattgattta 10918369  T
Q  185 ttagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    |||| ||  |||||| ||||| |||  ||||||||  ||||||||| ||||||||    
T  10918368 ttagctcattagtctttttaaccttgaatcacattatttatttaaatatgttcat 10918314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 74 - 156
Target Start/End: Complemental strand, 18988695 - 18988613
Alignment:
Q  74 catatttaaacatattattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattat 156  Q
    |||||||||| ||||||||||| | |||||||||||||||||  |||||||| |||| ||   |||||||||||||| |||||    
T  18988695 catatttaaatatattattatagattagaattgaaatatgatataatatataatcaagttctctaaaaatccatgttaattat 18988613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 11873688 - 11873629
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaa 62  Q
    ||||||||  |||||||||||||||||||||| |||||| || ||||||||||||||||||    
T  11873688 ttgaattagaataaaaatttgttaactttttc-ataatttaaacttattagtatacattaa 11873629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 74 - 213
Target Start/End: Original strand, 18731070 - 18731207
Alignment:
Q  74 catatttaaacatattattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaata 173  Q
    ||||||||||  ||||||||||||  ||||||||||||||||  | |||||||| |||||   ||||| | | |||| | |||||||  | |||||||||    
T  18731070 catatttaaatgtattattataaataagaattgaaatatgatatattatatagtaaaattctctaaaacttcgtgttaaatatcaaa--aaagtttaata 18731167  T
Q  174 taactgatatattagttcgctagtctatttaaacttagat 213  Q
    | | |||| ||||||||| ||| ||||||||| |||||||    
T  18731168 tcattgatctattagttcactaatctatttaagcttagat 18731207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 158 - 206
Target Start/End: Complemental strand, 29571143 - 29571095
Alignment:
Q  158 aaaagagagtttaatataactgatatattagttcgctagtctatttaaa 206  Q
    |||| |||||||||| ||| |||||||||||||||||||||||||||||    
T  29571143 aaaaaagagtttaatctaattgatatattagttcgctagtctatttaaa 29571095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 178 - 238
Target Start/End: Complemental strand, 35412420 - 35412360
Alignment:
Q  178 tgatatattagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttca 238  Q
    |||| ||||||||| |||||||| | |||||||||||| ||| ||||||||||||||||||    
T  35412420 tgatttattagttcactagtctactcaaacttagatcatattacttatttaaagatgttca 35412360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 41873097 - 41873155
Alignment:
Q  5 aattaacataaaaatttgttaactttttcaataattcaagc-ttattagtatacattaa 62  Q
    |||||| ||| ||||||||||||||||||| ||||| |||| |||||||||||||||||    
T  41873097 aattaaaatataaatttgttaactttttcactaatttaagctttattagtatacattaa 41873155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 333948 - 333887
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaag-cttattagtatacattaa 62  Q
    ||||||||| ||| |||||||| |||||||||||||||| |||  |||||||||||||||||    
T  333948 ttgaattaaaatataaatttgtaaactttttcaataatttaagttttattagtatacattaa 333887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 12579977 - 12580038
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagctt-attagtatacattaa 62  Q
    ||||||||| ||| |||||||| |||||||||| ||||| |||||| |||||||||||||||    
T  12579977 ttgaattaaaatataaatttgtaaactttttcactaatttaagctttattagtatacattaa 12580038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 8570112 - 8570168
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagcttattagtataca 58  Q
    ||||||||| ||||||||||||||||||||| | ||||| ||| |||||||| ||||    
T  8570112 ttgaattaaaataaaaatttgttaacttttttagtaatttaagtttattagtgtaca 8570168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 39964147 - 39964087
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaa 62  Q
    ||||||||| ||| |||||| |||||||||| |  ||||||||||||| ||||||||||||    
T  39964147 ttgaattaaaatataaatttattaacttttttagcaattcaagcttataagtatacattaa 39964087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 233
Target Start/End: Complemental strand, 22658432 - 22658377
Alignment:
Q  178 tgatatattagttcgctagtctatttaaacttagatcacattgcttatttaaagat 233  Q
    ||||||||||||||| ||||||||||||| ||| || | ||| |||||||||||||    
T  22658432 tgatatattagttcgatagtctatttaaatttatattatatttcttatttaaagat 22658377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 239
Target Start/End: Original strand, 4385974 - 4386068
Alignment:
Q  145 catgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    |||||| | |||||| | |||||||||||| | |||| ||||||||  ||| | ||||||||||||||||| |||  ||| ||||| ||||||||    
T  4385974 catgttaaatatcaagaaagagtttaatatcattgatctattagtttactattttatttaaacttagatcatattatttaattaaaaatgttcat 4386068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 62
Target Start/End: Original strand, 11789717 - 11789763
Alignment:
Q  16 aaatttgttaactttttcaataattcaagcttattagtatacattaa 62  Q
    |||||||||||| ||||||||| || || ||||||||||||||||||    
T  11789717 aaatttgttaaccttttcaatagtttaaacttattagtatacattaa 11789763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 36440155 - 36440123
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttca 34  Q
    ||||||||| |||||||||||||||||||||||    
T  36440155 ttgaattaaaataaaaatttgttaactttttca 36440123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 110; Significance: 2e-55; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 2 - 239
Target Start/End: Complemental strand, 10667796 - 10667562
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaannnnnnnncttcatatttaaacatattattataaactag 101  Q
    ||||||||| |||||||||||| ||| |||||| ||||| |||||||||||||||||||||         | ||||||||||  |||| |||||||||||    
T  10667796 ttgaattaaaataaaaatttgtcaaccttttcagtaatttaagcttattagtatacattaatttttt---tgcatatttaaatgtattgttataaactag 10667700  T
Q  102 aattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctat 201  Q
    |||||||||||| |  |||||||||||||||||| ||||||| |||||||| ||||||||||||||||| | ||| |||| ||| |||| ||||||||||    
T  10667699 aattgaaatatggtacaatatatagtcaaatttcctaaaaattcatgttgaatatcaaaagagagtttattctaattgatctatgagtttgctagtctat 10667600  T
Q  202 ttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    |||||||||||||||||| |||||  ||||||||||||    
T  10667599 ttaaacttagatcacattacttatacaaagatgttcat 10667562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 74 - 239
Target Start/End: Original strand, 24556571 - 24556737
Alignment:
Q  74 catatttaaacatattattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaata 173  Q
    ||||| ||||| ||||||||||||||| ||||||||||||||  ||||||||||| |||| | |||||   | ||||||||||||||||||||||||||     
T  24556571 catatataaacgtattattataaactaaaattgaaatatgatacaatatatagtcgaattccctaaaacctcgtgttgattatcaaaagagagtttaatc 24556670  T
Q  174 taactgatatattagttcgctagtctatttaaac-ttagatcacattgcttatttaaagatgttcat 239  Q
    ||| |||  ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  24556671 taattgaactattagttcgctagtctatttaaactttagatcacattgcttatttaaagatgttcat 24556737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 2 - 236
Target Start/End: Original strand, 6248693 - 6248923
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaannnnnnnncttcatatttaaacatattattataaactag 101  Q
    ||||||||| ||| |||||||||| |||||||| ||||| |||||||||||||||||||||         | ||| | ||||  ||||||||| ||||||    
T  6248693 ttgaattaaaatataaatttgttatctttttcagtaatttaagcttattagtatacattaattttt----tgcatttataaatgtattattatgaactag 6248788  T
Q  102 aattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctat 201  Q
    ||||||||||||||  || |||| ||||||||   |||||   ||||||||||||||||| |||||||||| |||||||||||||| ||||| |||||||    
T  6248789 aattgaaatatgatacaagatattgtcaaattctctaaaacctcatgttgattatcaaaatagagtttaatctaactgatatattaattcgccagtctat 6248888  T
Q  202 ttaaacttagatcacattgcttatttaaagatgtt 236  Q
    |||||||||||  |||||||||||||||| |||||    
T  6248889 ttaaacttagacaacattgcttatttaaatatgtt 6248923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 86 - 239
Target Start/End: Original strand, 9952718 - 9952871
Alignment:
Q  86 tattattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatat 185  Q
    ||||||||||||||||||||||||||| ||  ||||||||||| |||||| |||||   | |||||||||||||||||||||||||| ||| |||  |||    
T  9952718 tattattataaactagaattgaaatattatgcaatatatagtcgaatttcctaaaatctcgtgttgattatcaaaagagagtttaatctaattgaactat 9952817  T
Q  186 tagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    ||||||| ||||| |||||||| |||||||||||| ||||||||||||||||||    
T  9952818 tagttcggtagtccatttaaacgtagatcacattgtttatttaaagatgttcat 9952871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 86 - 230
Target Start/End: Original strand, 26244259 - 26244403
Alignment:
Q  86 tattattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatat 185  Q
    ||||||||||||||| ||||||||||||||  |||||||||||||||| | ||||||   |||||||||||||||||| |||||||| ||| |||| |||    
T  26244259 tattattataaactaaaattgaaatatgatacaatatatagtcaaattccgtaaaaactaatgttgattatcaaaagatagtttaatctaattgatttat 26244358  T
Q  186 tagttcgctagtctatttaaacttagatcacattgcttatttaaa 230  Q
    |||||| ||| |||||| |||||||||||||||||||||||||||    
T  26244359 tagttcactaatctattgaaacttagatcacattgcttatttaaa 26244403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 2 - 221
Target Start/End: Complemental strand, 33248292 - 33248077
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaannnnnnnncttcatatttaaacatattattataaactag 101  Q
    ||||||||| ||||| |  |||||||||||| | ||||| ||||||||||||||| |||||         | ||||||||||  ||||| ||||||||||    
T  33248292 ttgaattaaaataaatacgtgttaacttttttagtaatttaagcttattagtataaattaattttt----tgcatatttaaatgtattagtataaactag 33248197  T
Q  102 aattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctat 201  Q
    || |||||||||||  |||||||| ||||||||||||||||  |||||| ||||||||||||||||||||| ||| |||||| |||||| | ||||||||    
T  33248196 aactgaaatatgatacaatatataatcaaatttcttaaaaactcatgttaattatcaaaagagagtttaatttaattgatatcttagtttgttagtctat 33248097  T
Q  202 ttaaacttagatcacattgc 221  Q
    ||| |||||||| |||||||    
T  33248096 ttacacttagataacattgc 33248077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 21 - 239
Target Start/End: Complemental strand, 13641014 - 13640801
Alignment:
Q  21 tgttaactttttcaataattcaagcttattagtatacattaannnnnnnncttcatatttaaacatattattataaactagaattgaaatatgatcaaat 120  Q
    ||||||||||||   ||||| |||||||||||||||||||||         | ||||| ||||  ||||||||||||||||||||||||||||||  ||     
T  13641014 tgttaactttttatgtaatttaagcttattagtatacattaattttt----tacatatataaatgtattattataaactagaattgaaatatgatacaac 13640919  T
Q  121 atatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtctatttaaacttagatcacattg 220  Q
    |||| |||||||| | |||||   |||||| |||||||||| |||||||||| ||| |||| |||||||| ||||||||||| ||||||| |||||||||    
T  13640918 atattgtcaaattccctaaaacctcatgttaattatcaaaa-agagtttaatttaattgatttattagttagctagtctattaaaacttatatcacattg 13640820  T
Q  221 cttatttaaagatgttcat 239  Q
    ||||||||| |||||||||    
T  13640819 cttatttaatgatgttcat 13640801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 86 - 239
Target Start/End: Original strand, 24073523 - 24073675
Alignment:
Q  86 tattattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatat 185  Q
    |||||||||||||||||||| |||||||||  |||||||||||||||| | |||| |   || ||||||||||||||||| |||||| ||| ||||||||    
T  24073523 tattattataaactagaattaaaatatgatacaatatatagtcaaattccctaaatacttatcttgattatcaaaagagaatttaatctaattgatatat 24073622  T
Q  186 tagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    | ||| |||||||||||| |||  ||||||||||||||||| ||||||||||||    
T  24073623 tggtttgctagtctattt-aacccagatcacattgcttattaaaagatgttcat 24073675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 74 - 236
Target Start/End: Complemental strand, 33614694 - 33614532
Alignment:
Q  74 catatttaaacatattattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaata 173  Q
    |||||||||| |||||||||||||||| ||||||||||||||  |||| |||||||  |||  ||||||| |||||| | ||||||||||||||| |||     
T  33614694 catatttaaatatattattataaactaaaattgaaatatgatttaataaatagtcatgttttctaaaaattcatgttaaatatcaaaagagagttcaatc 33614595  T
Q  174 taactgatatattagttcgctagtctatttaaacttagatcacattgcttatttaaagatgtt 236  Q
    | | ||||||||||||||| |  |||||||||||||| || |||||   |||||||| |||||    
T  33614594 tcattgatatattagttcgttgatctatttaaacttatattacattatatatttaaatatgtt 33614532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 2 - 239
Target Start/End: Original strand, 5331092 - 5331325
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagctt-attagtatacattaannnnnnnncttcatatttaaacatattattataaacta 100  Q
    ||||||||| ||| ||| |||| ||||||||| |||| |||||||| |||||||||||||||         | ||||| ||||  |||||||| || |||    
T  5331092 ttgaattaaaatataaacttgtaaactttttctataactcaagctttattagtatacattaattttt----tgcatatataaatgtattattagaagcta 5331187  T
Q  101 gaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttcgctagtcta 200  Q
    |||| ||||||||||  ||||||||||  |||||| |||||     ||||||| || |||| ||| |||||| ||| | |  |||||||||| ||||| |    
T  5331188 gaatagaaatatgatacaatatatagttgaatttcctaaaaccttgtgttgat-attaaaaaagaatttaatctaattaaactattagttcgttagtcca 5331286  T
Q  201 tttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    ||||||||||| ||||||||||||||||||||| |||||    
T  5331287 tttaaacttaggtcacattgcttatttaaagatattcat 5331325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 191
Target Start/End: Original strand, 6228044 - 6228211
Alignment:
Q  20 ttgttaactttttcaataattcaagcttattagtatacattaannnnnnnncttcatatttaaacatattattataaactagaattgaaatatgatcaaa 119  Q
    ||||||||||||||| ||||| || ||||||||||||||||||           ||||| ||||  ||||||||||||||| ||||||||||| ||  ||    
T  6228044 ttgttaactttttcagtaatttaaacttattagtatacattaatttttcg----catatataaatgtattattataaactataattgaaatattatacaa 6228139  T
Q  120 tatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaatataactgatatattagttc 191  Q
    |||||| ||| ||| ||||||||    |||||||||| ||||||||||||||| ||| |||| |||||||||    
T  6228140 tatatattcagattccttaaaaacttgtgttgattattaaaagagagtttaatctaattgatctattagttc 6228211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 74 - 239
Target Start/End: Complemental strand, 2804000 - 2803834
Alignment:
Q  74 catatttaaacatattattataaactagaattgaaatatgatcaaatatatagtcaaatt-tcttaaaaatccatgttgattatcaaaagagagtttaat 172  Q
    ||||||| || |||||||||||||||| ||| ||||| | ||  |||||| ||||||||| ||| |||||| |||||| | ||||||||| | |||||||    
T  2804000 catatttgaatatattattataaactaaaatagaaatcttatataatataaagtcaaattctctaaaaaatacatgttaaatatcaaaagggggtttaat 2803901  T
Q  173 ataactgatatattagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
     |   |  | |||||| | |||||| |||||||| |||||||||||| ||||||||||||| |||||    
T  2803900 ctctttagtttattagcttgctagtatatttaaaattagatcacattacttatttaaagatattcat 2803834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 74 - 224
Target Start/End: Original strand, 10265733 - 10265883
Alignment:
Q  74 catatttaaacatattattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaata 173  Q
    ||||||||||  |||||||||||| |||| |||||| |||||  ||||| |||||||||||  ||||| | |||||| | ||||||| |  ||||||||     
T  10265733 catatttaaatgtattattataaattagagttgaaacatgatataatatttagtcaaattttctaaaagttcatgttaaatatcaaatggaagtttaatc 10265832  T
Q  174 taactgatatattagttcgctagtctatttaaacttagatcacattgctta 224  Q
    | | |||| ||| |||| |||||| |||| ||||||||| |||||| ||||    
T  10265833 tcattgatctataagtttgctagtatattgaaacttagaccacattactta 10265883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 90 - 172
Target Start/End: Complemental strand, 33011798 - 33011716
Alignment:
Q  90 attataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaat 172  Q
    ||||||||||||||||||||||||||  |||||||  ||||||| | ||||||  |||||||||||||||| || ||||||||    
T  33011798 attataaactagaattgaaatatgatataatatatgatcaaattccgtaaaaactcatgttgattatcaaatgatagtttaat 33011716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 17225440 - 17225391
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagcttatta 51  Q
    ||||||||| ||||||||||||||||||||||| ||||| ||||||||||    
T  17225440 ttgaattaaaataaaaatttgttaactttttcagtaatttaagcttatta 17225391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 198 - 236
Target Start/End: Original strand, 6228374 - 6228412
Alignment:
Q  198 ctatttaaacttagatcacattgcttatttaaagatgtt 236  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  6228374 ctatttaaacttagatcacattgcttatttaaatatgtt 6228412  T

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Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 193 - 239
Target Start/End: Complemental strand, 33011661 - 33011615
Alignment:
Q  193 ctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    |||||||||||||||||| ||||||||  ||||||||||||||||||    
T  33011661 ctagtctatttaaacttatatcacattatttatttaaagatgttcat 33011615  T

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Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 239
Target Start/End: Complemental strand, 5167267 - 5167211
Alignment:
Q  183 tattagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    |||||||||||| ||| |||||||||||||| | ||||| |||||||||||| ||||    
T  5167267 tattagttcgctcgtccatttaaacttagattatattgcatatttaaagatgatcat 5167211  T

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Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 26244145 - 26244193
Alignment:
Q  5 aattaacataaaaatttgttaactttttcaataattcaagcttattagt 53  Q
    |||||| ||| ||||||||||||||||||||||||| || |||||||||    
T  26244145 aattaaaatataaatttgttaactttttcaataatttaaacttattagt 26244193  T

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Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 122
Target Start/End: Complemental strand, 17225223 - 17225173
Alignment:
Q  72 ttcatatttaaacatattattataaactagaattgaaatatgatcaaatat 122  Q
    |||| |||||||  ||||||||||||||| |||||||||||||| ||||||    
T  17225223 ttcaaatttaaatgtattattataaactataattgaaatatgatgaaatat 17225173  T

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Target: scaffold0330 (Bit Score: 97; Significance: 9e-48; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 2 - 239
Target Start/End: Original strand, 10845 - 11079
Alignment:
Q  2 ttgaattaacataaaaatttgttaactttttcaataattcaagcttattagtatacattaannnnnnnncttcatatttaaacatattattataaactag 101  Q
    ||||||||| || ||| |||||||||||||||| ||||| ||| |||||||||| ||||||         | ||||||||||  ||||||| |||||||     
T  10845 ttgaattaaaattaaagtttgttaactttttcagtaatttaagtttattagtattcattaatttt-----tgcatatttaaatgtattattctaaactat 10939  T
Q  102 aattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagaga--gtttaatataactgatatattagttcgctagtct 199  Q
    ||||| ||| ||||  |||||||||||||||||| ||| ||  |||||||||||||||||||||  ||||||||||| | ||||||||||| | ||||||    
T  10940 aattggaatgtgatataatatatagtcaaatttcctaataactcatgttgattatcaaaagagatcgtttaatataatttatatattagtttgatagtct 11039  T
Q  200 atttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  11040 atttaaacttagatcatattgcttatttaaagatgttcat 11079  T

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Target: scaffold0036 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 74 - 239
Target Start/End: Original strand, 52979 - 53144
Alignment:
Q  74 catatttaaacatattattataaactagaattgaaatatgatcaaatatatagtcaaatttcttaaaaatccatgttgattatcaaaagagagtttaata 173  Q
    ||||||||||  || ||||||||| |||||||||||||||||  ||||| |||||||||||| ||||||    ||||||||||||||||||||||||||     
T  52979 catatttaaatgtaatattataaattagaattgaaatatgatacaatatgtagtcaaatttcctaaaaacttctgttgattatcaaaagagagtttaatt 53078  T
Q  174 taactgatatattagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttcat 239  Q
    |||  |||||||||||||| || ||||||||||||||||||  |||| ||||||||||||||||||    
T  53079 taatcgatatattagttcgttaatctatttaaacttagatctaattgtttatttaaagatgttcat 53144  T

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Target: scaffold0003 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 75 - 238
Target Start/End: Original strand, 324879 - 325042
Alignment:
Q  75 atatttaaacatattattataaactagaattgaaatatgatcaaatatatagtcaaatttct-taaaaatccatgttgattatcaaaagagagtttaata 173  Q
    |||||||||  ||||| ||||||  |||||||| |||||||  |||||| | | |||||||| ||||| | |||||| | |||| |||||| ||||||||    
T  324879 atatttaaatgtattactataaataagaattgagatatgatttaatatacaat-aaatttctctaaaacttcatgttaaatatcgaaagagggtttaata 324977  T
Q  174 taactgatatattagttcgctagtctatttaaacttagatcacattgcttatttaaagatgttca 238  Q
    | | |||| ||||| |||| ||||||||||||  |||||||||||| ||||||||||||| ||||    
T  324978 tcattgatttattaattcgttagtctatttaacattagatcacattacttatttaaagatcttca 325042  T

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Target: scaffold0373 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0373
Description:

Target: scaffold0373; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 74 - 236
Target Start/End: Complemental strand, 7439 - 7278
Alignment:
Q  74 catatttaaacatattattataaactagaattgaaatatgatcaaatatatagtcaaatttct-taaaaatccatgttgattatcaaaagagagtttaat 172  Q
    ||||||||||  |||||||||||| |||||||||||||||||  |||||||||| ||| |||| ||||| | |||||| | |||| ||| ||| ||||||    
T  7439 catatttaaatgtattattataaattagaattgaaatatgatataatatatagt-aaacttctctaaaacttcatgttaaatatcgaaa-agaatttaat 7342  T
Q  173 ataactgatatattagttcgctagtctatttaaacttagatcacattgcttatttaaagatgtt 236  Q
    || | |||| |||||| | | ||||| ||||||  ||||||| |||| ||||||||||||||||    
T  7341 atcattgatctattagcttggtagtcaatttaacattagatcgcattacttatttaaagatgtt 7278  T

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