View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4098_low_10 (Length: 375)
Name: NF4098_low_10
Description: NF4098
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4098_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 296; Significance: 1e-166; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 19 - 358
Target Start/End: Complemental strand, 32702413 - 32702076
Alignment:
| Q |
19 |
aaaacgtgctttgtcttgaacctgacaatcacaaacacgtgggctttctttcttatctgacaaaacatagcaccagaaaaacctgtatacgttggatata |
118 |
Q |
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| T |
32702413 |
aaaacgtgctttgtcttgaacctgacaatcacaaacacgtgggctttctttcttatctgacaaaacatagcaccagaaaaacctgtatacgttggatata |
32702314 |
T |
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| Q |
119 |
gtttattgttattattgtcttttaatataaataaatttttgaaacaattttctatggttgctggaaaaatgaaagaaagaagccaagttgtttgtttgct |
218 |
Q |
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| T |
32702313 |
gtttattgttattattgtcttttaatataaataaatttttgaaacaattttctatggttgctggaaaaatgaaagaaagaagccaagttatttgtttgtt |
32702214 |
T |
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| Q |
219 |
tttatatataagcagcaagcaggaatacgaatccgaattgaattgaagcaaacaataacaatagtggaagattgggaaatccagtaaagttttctccacc |
318 |
Q |
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| T |
32702213 |
tttatatataagcaggaa-tacgaatccgaat-tgaattgaattgaagcaaacaataacaatagtggaagattgggaaatccagtaaagttttctccacc |
32702116 |
T |
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| Q |
319 |
atttgccacagacagttcaaacacagaaaatacttggatg |
358 |
Q |
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| T |
32702115 |
atttgccacagacagttcaaacacagaaaatacttggatg |
32702076 |
T |
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