View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4100_high_8 (Length: 245)
Name: NF4100_high_8
Description: NF4100
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4100_high_8 |
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Alignment Details
Target: chr8 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 3119529 - 3119757
Alignment:
| Q |
1 |
ttaaatacaactcttcatattaattcaatctgctagcttatctaacaatacaaagaggcatgactcaaaaaatgctaactaagcatacaaatgagcaagt |
100 |
Q |
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| T |
3119529 |
ttaaatacaactcttcatattaattctatctgttagcttatctaacaatacaaagaggcatgactcaaaaaatgctaactaggcatacaaatgagcaagt |
3119628 |
T |
|
| Q |
101 |
atatatattgatttgtcaacgaacaatttacttccaaaaagtttggaaaagaggttatgatggaacaatcactacaagaatagtaacgaattttgtctta |
200 |
Q |
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||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3119629 |
atatatattgattagtcaacgaacaatttacttgtaaaaagtttggaaaagaggttatgatggaacaatcactacaagaatagtaacgaattttgtctta |
3119728 |
T |
|
| Q |
201 |
ttatttgatccttatgccttatttctagt |
229 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
3119729 |
ttatttgatccttatgccttatttctagt |
3119757 |
T |
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