View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4104_high_1 (Length: 604)

Name: NF4104_high_1
Description: NF4104
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4104_high_1
NF4104_high_1
[»] chr7 (19 HSPs)
chr7 (221-589)||(22831815-22832182)
chr7 (13-225)||(22835144-22835356)
chr7 (491-589)||(22810445-22810543)
chr7 (355-462)||(22816243-22816350)
chr7 (13-227)||(22886610-22886824)
chr7 (359-453)||(22886423-22886524)
chr7 (481-589)||(22859152-22859261)
chr7 (355-461)||(22810585-22810690)
chr7 (484-546)||(22894792-22894854)
chr7 (490-589)||(22806100-22806199)
chr7 (484-539)||(22841490-22841545)
chr7 (407-462)||(22843080-22843135)
chr7 (494-589)||(22842963-22843059)
chr7 (371-451)||(22843134-22843214)
chr7 (481-546)||(22816032-22816095)
chr7 (483-588)||(22886290-22886396)
chr7 (405-462)||(22874013-22874070)
chr7 (484-544)||(22899055-22899113)
chr7 (484-544)||(22840890-22840950)
[»] chr1 (3 HSPs)
chr1 (485-576)||(21149819-21149910)
chr1 (68-200)||(35877111-35877242)
chr1 (163-232)||(897241-897310)
[»] chr5 (1 HSPs)
chr5 (69-306)||(4523922-4524154)
[»] chr4 (1 HSPs)
chr4 (160-241)||(52934488-52934570)
[»] scaffold0533 (1 HSPs)
scaffold0533 (136-226)||(3152-3242)
[»] chr8 (1 HSPs)
chr8 (258-300)||(42447348-42447390)
[»] chr3 (1 HSPs)
chr3 (68-118)||(29675556-29675606)
[»] chr2 (1 HSPs)
chr2 (73-118)||(35984842-35984887)


Alignment Details
Target: chr7 (Bit Score: 306; Significance: 1e-172; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 221 - 589
Target Start/End: Complemental strand, 22832182 - 22831815
Alignment:
Q  221 atagtattaataggggtatattagaaagaagaagaaaaataacaaatgcatttagtaatttgtagtgagtcttatatttaaggacatacattttctctta 320  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||    
T  22832182 atagtattaataggggtatattagaaagaagaagaaaaataacaaatgcatttagtaatttgtagtgagtcttgtatttaaggacatacattttctttta 22832083  T
Q  321 taaatcgtcttatatttagagatgaggtgactatgtcaaaacaaacatatatctttttatccttccaccacatattcattcatcatttgatttgcagcat 420  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22832082 taaatcgtcttatatttagagatgaggtgactatgtcaaaacaaacatatatctttttatccttccaccacatattcattcatcatttgatttgcagcat 22831983  T
Q  421 aatcaatagtaacttgtcaagtccacacattcaagtttgaaaaggnnnnnnnnnnnncac-tttaagaatttagacgacattgatgttttaatttcacac 519  Q
    ||||||||||||||||||||||||||||||||||||||||||||             ||| |||||||||||||||||||||||||||||||||||||||    
T  22831982 aatcaatagtaacttgtcaagtccacacattcaagtttgaaaag--aaaaaaaaaaacacttttaagaatttagacgacattgatgttttaatttcacac 22831885  T
Q  520 attcaatttagcatcaaacacttaatatgaatacgttgaaaaatattcccccactactacagatggaaag 589  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  22831884 attcaatttagcatcaaacacttaatatgaatacgttgaaaaatattcccccacaactacagatggaaag 22831815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 160; E-Value: 6e-85
Query Start/End: Original strand, 13 - 225
Target Start/End: Complemental strand, 22835356 - 22835144
Alignment:
Q  13 gaacctgtggctcgaaatttcgcctcgatttttgcaagaagnnnnnnntttccttcgtccttttttataagaacactttacaaaagtcacgtgtattaag 112  Q
    |||| ||||||||||||||||||||||||||||||||||||       |||||||| |||||||||||||||||||||||||||| |||||||| |||||    
T  22835356 gaacatgtggctcgaaatttcgcctcgatttttgcaagaagaaaaaaatttccttcatccttttttataagaacactttacaaaaatcacgtgtcttaag 22835257  T
Q  113 aaaagtctttggagtaaattttttatctgaaatgtatgtatctgttgctaaattaccctttgtatataagtacattcaatgttattttgcattttctatg 212  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  22835256 aaaagtctttggagtaaaatttttatctgaaatgtatgtatctattgctatattaccctttgtatataagtacattcaatgttattttgcattttctatg 22835157  T
Q  213 ataaattgatagt 225  Q
    ||||||| |||||    
T  22835156 ataaatttatagt 22835144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 491 - 589
Target Start/End: Complemental strand, 22810543 - 22810445
Alignment:
Q  491 tagacgacattgatgttttaatttcacacattcaatttagcatcaaacacttaatatgaatacgttgaaaaatattcccccactactacagatggaaag 589  Q
    |||||||| |||||| |||||||||||| ||||||||||||||| ||||||||||||| | ||||||||||| |||||||| |||||||||||||||||    
T  22810543 tagacgactttgatgatttaatttcacatattcaatttagcatcgaacacttaatatgtaaacgttgaaaaacattcccccgctactacagatggaaag 22810445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 355 - 462
Target Start/End: Complemental strand, 22816350 - 22816243
Alignment:
Q  355 gtcaaaacaaacatatatctttttatccttccaccacatattcattcatcatttgatttgcagcataatcaatagtaacttgtcaagtccacacattcaa 454  Q
    ||||||||  || |||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||   |||||| ||||||||||||    
T  22816350 gtcaaaacccacttatatctttttatccttccaccacgtattaattcatcattttatttgcagcataatcaatagtaataggtcaaggccacacattcaa 22816251  T
Q  455 gtttgaaa 462  Q
    || |||||    
T  22816250 gtgtgaaa 22816243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 13 - 227
Target Start/End: Complemental strand, 22886824 - 22886610
Alignment:
Q  13 gaacctgtggctcgaaatttcgcctcgatttttgcaagaagnnnnnnntttccttcgtccttttttataagaacactttacaaaagtcacgtgtattaag 112  Q
    |||| |||||||||||||||| ||  |||||||||| ||||       || ||| | |||||||||| ||||||||||||||||| ||||| ||| |||     
T  22886824 gaacatgtggctcgaaatttcaccatgatttttgcatgaagaaaaattttccctccatccttttttagaagaacactttacaaaaatcacgggtactaaa 22886725  T
Q  113 aaaagtctttggagtaaattttttatctgaaatgtatgtatctgttgctaaattaccctttgtatataagtacattcaatgttattttgcattttctatg 212  Q
    |||||||||| ||||||    ||| |||||||||| |||  || || |||||||||||||| |||| |||| ||||||| |||| ||| ||| ||||  |    
T  22886724 aaaagtctttcgagtaataaatttgtctgaaatgtgtgttactatttctaaattaccctttttataaaagtgcattcaaagttaattttcatattcttag 22886625  T
Q  213 ataaattgatagtat 227  Q
    |||||||||||||||    
T  22886624 ataaattgatagtat 22886610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 359 - 453
Target Start/End: Complemental strand, 22886524 - 22886423
Alignment:
Q  359 aaacaaacatatatctttttatccttccaccacatattcattcatcatttgatttgcagcataatc-------aatagtaacttgtcaagtccacacatt 451  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||       |||||||||| ||||||||||||||||    
T  22886524 aaaccaacatatatctttttatctttccaccacatattcattcatcatttgatttgaagcataatcaataatcaatagtaactggtcaagtccacacatt 22886425  T
Q  452 ca 453  Q
    ||    
T  22886424 ca 22886423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 481 - 589
Target Start/End: Complemental strand, 22859261 - 22859152
Alignment:
Q  481 tttaagaatttagacgacattgatgttttaatttcacacattcaatttagcatcaaacactt--aatatgaatacgttgaaaaatattcccccactacta 578  Q
    |||||||| |||||| ||||| |||||||||||||||| ||||||||| ||||| || ||||  |||||  | ||||||||||| |||||||||||||||    
T  22859261 tttaagaaattagacaacattaatgttttaatttcacatattcaattttgcatc-aagacttcgaatatataaacgttgaaaaacattcccccactacta 22859163  T
Q  579 cagatggaaag 589  Q
    |||||||||||    
T  22859162 cagatggaaag 22859152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 355 - 461
Target Start/End: Complemental strand, 22810690 - 22810585
Alignment:
Q  355 gtcaaaacaaacatatatctttttatccttccaccacatattcattcatcatttgatttgcagcataatcaatagtaacttgtcaagtccacacattcaa 454  Q
    |||||||| |||||||||||||| ||||||| ||||| |||||||| ||||||| |||||||||| ||||||||||||||  | |||| |||| ||||||    
T  22810690 gtcaaaaccaacatatatctttt-atccttcaaccacgtattcattaatcattttatttgcagcaaaatcaatagtaactgctaaagtgcacatattcaa 22810592  T
Q  455 gtttgaa 461  Q
    || ||||    
T  22810591 gtgtgaa 22810585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 484 - 546
Target Start/End: Complemental strand, 22894854 - 22894792
Alignment:
Q  484 aagaatttagacgacattgatgttttaatttcacacattcaatttagcatcaaacacttaata 546  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  22894854 aagaaattagacgacattgatgttttaatttcacatattcaatttagcatcaaacactcaata 22894792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 490 - 589
Target Start/End: Complemental strand, 22806199 - 22806100
Alignment:
Q  490 ttagacgacattgatgttttaatttcacacattcaatttagcatcaaacacttaatatgaatacgttgaaaaatattcccccactactacagatggaaag 589  Q
    |||||| ||| |||||| || |||||||| ||||||||||||||||||||||||||||| | || |||||||| |||  ||||||||||||  |||||||    
T  22806199 ttagacaacactgatgtcttgatttcacatattcaatttagcatcaaacacttaatatgtaaacattgaaaaacatttacccactactacaattggaaag 22806100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 484 - 539
Target Start/End: Complemental strand, 22841545 - 22841490
Alignment:
Q  484 aagaatttagacgacattgatgttttaatttcacacattcaatttagcatcaaaca 539  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  22841545 aagaaattagacgacattgatgttttaatttcacatattcaatttagcatcaaaca 22841490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 407 - 462
Target Start/End: Complemental strand, 22843135 - 22843080
Alignment:
Q  407 ttgatttgcagcataatcaatagtaacttgtcaagtccacacattcaagtttgaaa 462  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  22843135 ttgatttgcagcataatcaatagtaactggtcaagtccacacattcaagtgtgaaa 22843080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 494 - 589
Target Start/End: Complemental strand, 22843059 - 22842963
Alignment:
Q  494 acgacattgatgttttaatttcacacattcaatttagcatcaaacacttaatatgaatacgttg-aaaaatattcccccactactacagatggaaag 589  Q
    ||||||| |||||||| |||||||| ||||||||||||||||||||||||||||| | |  ||| ||||| |||  ||||||||||||| |||||||    
T  22843059 acgacatagatgttttgatttcacatattcaatttagcatcaaacacttaatatgtaaaaattgaaaaaacatttacccactactacagttggaaag 22842963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 371 - 451
Target Start/End: Complemental strand, 22843214 - 22843134
Alignment:
Q  371 atctttttatccttccaccacatattcattcatcatttgatttgcagcataatcaatagtaacttgtcaagtccacacatt 451  Q
    ||||||||||| |||||| || |||||||||||||||| |||||||||||||||||| |||||  | ||| ||||||||||    
T  22843214 atctttttatctttccacaacgtattcattcatcattttatttgcagcataatcaatggtaaccggccaattccacacatt 22843134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 481 - 546
Target Start/End: Complemental strand, 22816095 - 22816032
Alignment:
Q  481 tttaagaatttagacgacattgatgttttaatttcacacattcaatttagcatcaaacacttaata 546  Q
    |||||||| ||||| |||| |||||||||||||||| |  ||||||||||||||||||||||||||    
T  22816095 tttaagaaattagatgacactgatgttttaatttcata--ttcaatttagcatcaaacacttaata 22816032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 483 - 588
Target Start/End: Complemental strand, 22886396 - 22886290
Alignment:
Q  483 taagaatttagacgacattgatgttttaatttcacacattcaatttagcatcaaacacttaatatgaatacgtt-gaaaaatattcccccactactacag 581  Q
    |||||| |||||  ||||||||  || ||||||||| ||||||||||||||||||||||||||||| | | |||  ||||| |||| ||||||||||| |    
T  22886396 taagaaattagaacacattgataattaaatttcacatattcaatttagcatcaaacacttaatatgtaaatgttaaaaaaacattcacccactactactg 22886297  T
Q  582 atggaaa 588  Q
     ||||||    
T  22886296 ttggaaa 22886290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 405 - 462
Target Start/End: Complemental strand, 22874070 - 22874013
Alignment:
Q  405 atttgatttgcagcataatcaatagtaacttgtcaagtccacacattcaagtttgaaa 462  Q
    |||| |||| |||||||||||||||||||  ||||||||||||||||||||| |||||    
T  22874070 attttatttacagcataatcaatagtaaccggtcaagtccacacattcaagtgtgaaa 22874013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 484 - 544
Target Start/End: Complemental strand, 22899113 - 22899055
Alignment:
Q  484 aagaatttagacgacattgatgttttaatttcacacattcaatttagcatcaaacacttaa 544  Q
    |||||| |||| ||||||||||||| ||||||||| ||||||||||| |||||||||||||    
T  22899113 aagaatatagatgacattgatgttt-aatttcacatattcaatttag-atcaaacacttaa 22899055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 484 - 544
Target Start/End: Complemental strand, 22840950 - 22840890
Alignment:
Q  484 aagaatttagacgacattgatgttttaatttcacacattcaatttagcatcaaacacttaa 544  Q
    ||||| |||||  |||||||||||||||||||| | ||||| ||| |||||||||| ||||    
T  22840950 aagaaattagaaaacattgatgttttaatttcatatattcatttttgcatcaaacatttaa 22840890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 7e-23; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 485 - 576
Target Start/End: Original strand, 21149819 - 21149910
Alignment:
Q  485 agaatttagacgacattgatgttttaatttcacacattcaatttagcatcaaacacttaatatgaatacgttgaaaaatattcccccactac 576  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | | | || |||||||| |||| ||||||||    
T  21149819 agaaattagacgacattgatgttttaatttcacatattcaatttagcatcaaacacttaacacgtaaacattgaaaaacattcacccactac 21149910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 68 - 200
Target Start/End: Complemental strand, 35877242 - 35877111
Alignment:
Q  68 cgtccttttttataagaacactttacaaaagtcacgtgtattaagaaaagtctttggagtaaattttttatctgaaatgtatgtatctgttgctaaatta 167  Q
    ||||| |||||||||||||||||||||||| | ||  ||||||| ||||||   |||||| |    ||| ||| |||||| | || || || ||| ||||    
T  35877242 cgtccctttttataagaacactttacaaaaat-acaggtattaataaaagttgctggagtgataaatttgtctaaaatgtgtataactattactagatta 35877144  T
Q  168 ccctttgtatataagtacattcaatgttatttt 200  Q
    |||||||||||||| ||||||||||||||||||    
T  35877143 ccctttgtatataaatacattcaatgttatttt 35877111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 232
Target Start/End: Original strand, 897241 - 897310
Alignment:
Q  163 aattaccctttgtatataagtacattcaatgttattttgcattttctatgataaattgatagtattaata 232  Q
    |||||| ||||||| |||| |||||| ||||||| ||| ||| ||| | ||||||| |||||||||||||    
T  897241 aattactctttgtacataaatacatttaatgttacttttcatattccaagataaatagatagtattaata 897310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 69 - 306
Target Start/End: Complemental strand, 4524154 - 4523922
Alignment:
Q  69 gtccttttttataagaacactttacaaaagtcacgtgtattaagaaaagtctttggagtaaattttttatctgaaatgtatgtatctgttgctaaattac 168  Q
    |||| |||| ||||||||||| || ||||  |||| ||||||||||||||  |||||||||    ||| |||||||||| |||  || || ||||||||     
T  4524154 gtcccttttaataagaacactctaaaaaaaacacgggtattaagaaaagttgttggagtaataaatttgtctgaaatgtgtgtgactattactaaattat 4524055  T
Q  169 cctttgtatataagtacattcaatgttattttgcattttctatgataaattgatagtattaat-aggggtatattagaaagaagaagaaaaataacaaat 267  Q
    |||||||| |||| | |||||||| ||| ||  ||| ||| | ||||| | ||| |||||||| ||||||||| | |      ||| || | | | ||||    
T  4524054 cctttgtagataaatgcattcaatattacttatcatattccaagataattagatggtattaataaggggtataattg------gaaaaagagtgataaat 4523961  T
Q  268 gcatttagtaatttgtagtgagtcttatatttaaggaca 306  Q
    |||| ||||||||||||| |||||||||||||| |||||    
T  4523960 gcatctagtaatttgtagcgagtcttatatttagggaca 4523922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 160 - 241
Target Start/End: Original strand, 52934488 - 52934570
Alignment:
Q  160 ctaaattaccctttgtatataagtacattcaatgttattttgcattttctatgataaattgatagtattaat-aggggtatat 241  Q
    |||||||| ||||||| ||||| |||||||||||||| ||| ||| ||| | ||| ||||||| |||||||| ||||||||||    
T  52934488 ctaaattatcctttgtttataaatacattcaatgttacttttcatattccaagatgaattgattgtattaataaggggtatat 52934570  T

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Target: scaffold0533 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 136 - 226
Target Start/End: Original strand, 3152 - 3242
Alignment:
Q  136 tatctgaaatgtatgtatctgttgctaaattaccctttgtatataagtacattcaatgttattttgcattttctatgataaattgatagta 226  Q
    |||||||||||||||  |||||| |||||||| | ||||| ||||| || ||| ||||||||||| ||| ||  | |||||||| ||||||    
T  3152 tatctgaaatgtatgcgtctgttactaaattatcatttgtgtataaatatatttaatgttatttttcatatttcaagataaattaatagta 3242  T

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Target: chr8 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 258 - 300
Target Start/End: Complemental strand, 42447390 - 42447348
Alignment:
Q  258 aataacaaatgcatttagtaatttgtagtgagtcttatattta 300  Q
    ||||| |||||||| |||||||||||| |||||||||||||||    
T  42447390 aataataaatgcatctagtaatttgtaatgagtcttatattta 42447348  T

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Target: chr3 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 68 - 118
Target Start/End: Original strand, 29675556 - 29675606
Alignment:
Q  68 cgtccttttttataagaacactttacaaaagtcacgtgtattaagaaaagt 118  Q
    ||||| |||||||||||  ||||||||||| ||||| ||||||||||||||    
T  29675556 cgtccctttttataagattactttacaaaaatcacgagtattaagaaaagt 29675606  T

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Target: chr2 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 118
Target Start/End: Original strand, 35984842 - 35984887
Alignment:
Q  73 ttttttataagaacactttacaaaagtcacgtgtattaagaaaagt 118  Q
    |||||||| |||||||||||||||| ||||| ||||||||| ||||    
T  35984842 ttttttattagaacactttacaaaaatcacgggtattaagataagt 35984887  T

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