View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4105_high_1 (Length: 697)

Name: NF4105_high_1
Description: NF4105
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4105_high_1
NF4105_high_1
[»] chr8 (29 HSPs)
chr8 (271-568)||(26487747-26488044)
chr8 (271-507)||(38032558-38032792)
chr8 (271-568)||(42167585-42167855)
chr8 (1-153)||(26488290-26488441)
chr8 (44-205)||(26488118-26488281)
chr8 (271-380)||(19241352-19241460)
chr8 (271-380)||(19314536-19314644)
chr8 (69-208)||(19241143-19241281)
chr8 (69-208)||(19314327-19314465)
chr8 (70-208)||(38032377-38032513)
chr8 (454-568)||(19241462-19241576)
chr8 (454-568)||(19314646-19314760)
chr8 (71-140)||(38872778-38872847)
chr8 (69-140)||(22550701-22550772)
chr8 (68-123)||(31170580-31170635)
chr8 (69-126)||(41016579-41016636)
chr8 (69-126)||(41276736-41276793)
chr8 (93-208)||(42167399-42167514)
chr8 (69-126)||(45066212-45066269)
chr8 (71-145)||(18438791-18438866)
chr8 (69-126)||(483981-484038)
chr8 (73-126)||(26455526-26455579)
chr8 (69-126)||(44052076-44052133)
chr8 (73-140)||(41855533-41855600)
chr8 (78-143)||(14120410-14120474)
chr8 (69-126)||(15031049-15031105)
chr8 (73-125)||(28168454-28168506)
chr8 (73-140)||(40703997-40704063)
chr8 (73-126)||(42605085-42605138)
[»] chr5 (45 HSPs)
chr5 (271-568)||(7484114-7484411)
chr5 (271-568)||(6792068-6792365)
chr5 (271-529)||(41088482-41088738)
chr5 (271-568)||(1972668-1972966)
chr5 (271-567)||(4722725-4723008)
chr5 (1-208)||(41088232-41088437)
chr5 (1-208)||(7483856-7484061)
chr5 (271-384)||(40936908-40937021)
chr5 (1-208)||(1696394-1696599)
chr5 (39-204)||(6791857-6792021)
chr5 (1-208)||(36348728-36348933)
chr5 (54-208)||(40937092-40937245)
chr5 (588-681)||(41088742-41088835)
chr5 (453-568)||(1696099-1696214)
chr5 (271-381)||(1696214-1696323)
chr5 (271-381)||(36349004-36349113)
chr5 (90-208)||(4722512-4722631)
chr5 (460-568)||(36349114-36349222)
chr5 (71-149)||(1973086-1973164)
chr5 (589-680)||(41103171-41103262)
chr5 (289-388)||(13130108-13130204)
chr5 (69-126)||(5961-6018)
chr5 (71-140)||(18309894-18309963)
chr5 (79-151)||(25499713-25499785)
chr5 (68-145)||(23190674-23190751)
chr5 (69-126)||(38855562-38855619)
chr5 (73-140)||(541093-541160)
chr5 (79-126)||(11028855-11028902)
chr5 (69-140)||(41201893-41201964)
chr5 (164-206)||(11357187-11357229)
chr5 (69-126)||(8574886-8574943)
chr5 (69-126)||(19035403-19035460)
chr5 (73-142)||(20199994-20200063)
chr5 (69-126)||(27660105-27660162)
chr5 (588-675)||(1216535-1216623)
chr5 (71-126)||(3603009-3603064)
chr5 (396-443)||(23190504-23190551)
chr5 (164-206)||(11357011-11357053)
chr5 (593-671)||(41080772-41080850)
chr5 (73-126)||(8539394-8539447)
chr5 (69-126)||(11348352-11348409)
chr5 (73-114)||(41798988-41799029)
chr5 (454-509)||(11348016-11348072)
chr5 (69-125)||(30711012-30711068)
chr5 (84-140)||(34682437-34682493)
[»] chr1 (62 HSPs)
chr1 (273-568)||(35186292-35186587)
chr1 (271-568)||(38043826-38044123)
chr1 (271-568)||(39855865-39856162)
chr1 (271-568)||(15355407-15355703)
chr1 (271-568)||(49260303-49260598)
chr1 (273-568)||(24268996-24269287)
chr1 (271-568)||(23343808-23344102)
chr1 (274-568)||(17684957-17685248)
chr1 (271-527)||(35585539-35585798)
chr1 (273-468)||(33286043-33286238)
chr1 (2-208)||(38043550-38043755)
chr1 (393-568)||(37779437-37779608)
chr1 (1-208)||(39855588-39855794)
chr1 (2-208)||(23344173-23344379)
chr1 (271-388)||(37779589-37779706)
chr1 (2-208)||(40531798-40532001)
chr1 (1-149)||(33285789-33285936)
chr1 (70-208)||(49260094-49260232)
chr1 (47-206)||(14440805-14440964)
chr1 (271-363)||(40532072-40532164)
chr1 (453-568)||(12790077-12790192)
chr1 (394-497)||(17373643-17373746)
chr1 (453-568)||(40532181-40532296)
chr1 (271-353)||(12789971-12790053)
chr1 (89-204)||(15355217-15355332)
chr1 (3-105)||(12789809-12789910)
chr1 (93-208)||(37779769-37779884)
chr1 (69-126)||(19162057-19162114)
chr1 (69-126)||(44336415-44336472)
chr1 (72-140)||(14172256-14172324)
chr1 (79-126)||(13634041-13634088)
chr1 (73-140)||(18974967-18975034)
chr1 (93-205)||(39063400-39063513)
chr1 (73-140)||(41803870-41803937)
chr1 (73-140)||(49925026-49925093)
chr1 (73-140)||(51271427-51271494)
chr1 (74-140)||(46141937-46142003)
chr1 (68-149)||(14771288-14771369)
chr1 (73-126)||(29760673-29760726)
chr1 (164-201)||(35186660-35186697)
chr1 (164-201)||(35585432-35585469)
chr1 (73-142)||(49398305-49398374)
chr1 (164-208)||(24268878-24268922)
chr1 (69-140)||(6437376-6437447)
chr1 (70-145)||(17373818-17373893)
chr1 (73-140)||(26633697-26633764)
chr1 (69-148)||(27485199-27485277)
chr1 (69-140)||(36911532-36911603)
chr1 (73-140)||(42570292-42570359)
chr1 (73-116)||(49429022-49429065)
chr1 (81-126)||(13148904-13148949)
chr1 (41-126)||(19261022-19261107)
chr1 (79-140)||(35524904-35524965)
chr1 (73-126)||(44598756-44598809)
chr1 (93-149)||(24268801-24268857)
chr1 (83-126)||(13285197-13285240)
chr1 (454-500)||(24362878-24362925)
chr1 (529-568)||(24362942-24362981)
chr1 (454-499)||(16531004-16531049)
chr1 (93-149)||(16530741-16530797)
chr1 (93-149)||(17684744-17684800)
chr1 (454-509)||(49925267-49925323)
[»] chr7 (41 HSPs)
chr7 (271-568)||(22292137-22292434)
chr7 (271-568)||(43350013-43350310)
chr7 (302-568)||(17184490-17184756)
chr7 (271-568)||(42736281-42736575)
chr7 (272-559)||(15900053-15900326)
chr7 (271-568)||(20876690-20876963)
chr7 (2-208)||(22292505-22292710)
chr7 (3-208)||(20876415-20876619)
chr7 (2-208)||(43349739-43349942)
chr7 (1-208)||(17184840-17185044)
chr7 (70-208)||(42736638-42736775)
chr7 (289-388)||(3379762-3379861)
chr7 (46-145)||(4231088-4231187)
chr7 (271-324)||(2205881-2205934)
chr7 (70-145)||(1641042-1641117)
chr7 (74-140)||(46860671-46860737)
chr7 (165-208)||(2205767-2205810)
chr7 (73-126)||(10524182-10524235)
chr7 (79-140)||(21185800-21185861)
chr7 (69-126)||(34142509-34142566)
chr7 (71-124)||(48272308-48272361)
chr7 (73-140)||(28112952-28113019)
chr7 (73-140)||(36392295-36392362)
chr7 (79-126)||(45257881-45257928)
chr7 (454-568)||(1641484-1641600)
chr7 (73-126)||(17840741-17840794)
chr7 (69-126)||(20566184-20566241)
chr7 (69-126)||(40590400-40590457)
chr7 (71-140)||(48314830-48314899)
chr7 (73-145)||(33603370-33603442)
chr7 (396-443)||(3379747-3379794)
chr7 (79-126)||(15070530-15070577)
chr7 (73-140)||(15309812-15309879)
chr7 (83-126)||(41623735-41623778)
chr7 (69-140)||(48194468-48194539)
chr7 (69-123)||(9365844-9365898)
chr7 (71-140)||(42684044-42684113)
chr7 (69-126)||(45361789-45361846)
chr7 (73-145)||(28977727-28977799)
chr7 (83-126)||(42503996-42504039)
chr7 (69-140)||(46597051-46597120)
[»] chr6 (27 HSPs)
chr6 (271-568)||(12398086-12398383)
chr6 (322-568)||(32133343-32133586)
chr6 (1-208)||(12398454-12398659)
chr6 (289-388)||(20241075-20241174)
chr6 (289-388)||(22135059-22135158)
chr6 (289-388)||(22142412-22142511)
chr6 (299-388)||(17464266-17464355)
chr6 (49-126)||(30763462-30763539)
chr6 (93-208)||(32133057-32133172)
chr6 (73-140)||(35019746-35019813)
chr6 (69-126)||(13616406-13616463)
chr6 (69-125)||(32026127-32026183)
chr6 (69-126)||(27641569-27641626)
chr6 (73-140)||(13404469-13404536)
chr6 (69-123)||(6206914-6206968)
chr6 (69-123)||(11693881-11693935)
chr6 (79-125)||(32691360-32691406)
chr6 (69-126)||(34801669-34801727)
chr6 (69-126)||(29068116-29068173)
chr6 (69-126)||(29083363-29083420)
chr6 (69-139)||(14124556-14124626)
chr6 (396-442)||(20241060-20241106)
chr6 (396-442)||(22135044-22135090)
chr6 (396-442)||(22142397-22142443)
chr6 (73-126)||(29076174-29076227)
chr6 (73-126)||(29109707-29109760)
chr6 (73-126)||(29111147-29111200)
[»] chr4 (64 HSPs)
chr4 (274-568)||(47873324-47873621)
chr4 (271-568)||(22437921-22438219)
chr4 (271-568)||(51026412-51026707)
chr4 (271-564)||(2774314-2774607)
chr4 (271-547)||(36775084-36775359)
chr4 (271-568)||(21170770-21171055)
chr4 (271-568)||(45940832-45941103)
chr4 (272-509)||(14968914-14969154)
chr4 (271-546)||(2567693-2567942)
chr4 (399-568)||(43888243-43888409)
chr4 (39-208)||(2774669-2774838)
chr4 (1-208)||(36774808-36775013)
chr4 (1-208)||(22438290-22438494)
chr4 (433-568)||(49816198-49816333)
chr4 (282-380)||(43887863-43887961)
chr4 (1-208)||(43887597-43887789)
chr4 (73-208)||(51026223-51026359)
chr4 (426-517)||(17045573-17045664)
chr4 (39-145)||(9718972-9719078)
chr4 (323-385)||(17045514-17045576)
chr4 (93-208)||(2567507-2567622)
chr4 (73-140)||(44558818-44558885)
chr4 (69-140)||(49422255-49422326)
chr4 (73-140)||(51426708-51426775)
chr4 (330-388)||(4910376-4910434)
chr4 (289-387)||(17293063-17293161)
chr4 (69-126)||(21015904-21015961)
chr4 (300-385)||(21410694-21410779)
chr4 (519-568)||(49790800-49790849)
chr4 (433-517)||(21410763-21410846)
chr4 (68-140)||(49572738-49572810)
chr4 (69-140)||(955956-956027)
chr4 (46-145)||(21410275-21410374)
chr4 (93-201)||(49815961-49816069)
chr4 (73-126)||(28083841-28083894)
chr4 (93-208)||(45941174-45941289)
chr4 (69-126)||(56140541-56140598)
chr4 (323-383)||(49816152-49816212)
chr4 (46-145)||(4909964-4910063)
chr4 (164-207)||(17045336-17045379)
chr4 (73-140)||(33383974-33384041)
chr4 (69-140)||(34528330-34528401)
chr4 (71-126)||(37959581-37959636)
chr4 (69-126)||(40352501-40352558)
chr4 (69-126)||(41793529-41793586)
chr4 (69-126)||(55799380-55799437)
chr4 (73-140)||(34151783-34151851)
chr4 (470-517)||(21412600-21412647)
chr4 (69-140)||(39590404-39590475)
chr4 (69-123)||(6176042-6176096)
chr4 (68-126)||(24076712-24076770)
chr4 (79-145)||(37868100-37868166)
chr4 (69-123)||(49096172-49096226)
chr4 (73-138)||(9491123-9491188)
chr4 (164-208)||(10315664-10315709)
chr4 (396-441)||(17293131-17293176)
chr4 (164-201)||(21171088-21171125)
chr4 (73-140)||(6281027-6281094)
chr4 (537-568)||(17054305-17054336)
chr4 (41-126)||(8866890-8866975)
chr4 (93-208)||(14968661-14968777)
chr4 (299-344)||(21410524-21410569)
chr4 (93-153)||(10315723-10315783)
chr4 (452-500)||(17293015-17293063)
[»] chr3 (65 HSPs)
chr3 (271-568)||(10051978-10052275)
chr3 (271-568)||(44928759-44929056)
chr3 (271-568)||(14632766-14633063)
chr3 (271-568)||(34470688-34470979)
chr3 (271-568)||(46412909-46413206)
chr3 (302-568)||(11377633-11377899)
chr3 (271-567)||(30193835-30194127)
chr3 (271-568)||(49274718-49275004)
chr3 (271-568)||(47759583-47759870)
chr3 (271-568)||(50457873-50458168)
chr3 (271-566)||(51016589-51016879)
chr3 (271-568)||(51011929-51012204)
chr3 (1-208)||(42321826-42322032)
chr3 (39-204)||(10051739-10051903)
chr3 (1-208)||(11377344-11377549)
chr3 (39-208)||(34470449-34470617)
chr3 (1-208)||(44929129-44929337)
chr3 (2-208)||(51016949-51017157)
chr3 (39-208)||(51011707-51011875)
chr3 (39-204)||(49275061-49275224)
chr3 (271-363)||(42322102-42322194)
chr3 (453-568)||(42322211-42322326)
chr3 (352-517)||(27188370-27188534)
chr3 (73-208)||(50457668-50457802)
chr3 (70-145)||(20374378-20374453)
chr3 (46-208)||(27096130-27096292)
chr3 (73-140)||(55267585-55267652)
chr3 (73-126)||(2267225-2267278)
chr3 (69-126)||(3493750-3493807)
chr3 (69-126)||(3497444-3497501)
chr3 (73-126)||(36136449-36136502)
chr3 (93-208)||(47759398-47759512)
chr3 (73-126)||(50998505-50998558)
chr3 (69-145)||(45098970-45099046)
chr3 (79-126)||(8397740-8397787)
chr3 (69-140)||(43571520-43571591)
chr3 (73-140)||(44490515-44490582)
chr3 (73-140)||(55205437-55205504)
chr3 (74-140)||(2430114-2430180)
chr3 (69-123)||(34645726-34645780)
chr3 (73-145)||(18441954-18442026)
chr3 (73-145)||(19487028-19487100)
chr3 (71-126)||(41579584-41579640)
chr3 (72-140)||(46345095-46345163)
chr3 (93-204)||(46412724-46412834)
chr3 (73-145)||(52567928-52568000)
chr3 (525-568)||(18441673-18441716)
chr3 (525-568)||(19486747-19486790)
chr3 (79-125)||(2645631-2645677)
chr3 (69-123)||(2950531-2950585)
chr3 (299-345)||(27188525-27188571)
chr3 (69-123)||(34051167-34051221)
chr3 (69-126)||(43478679-43478737)
chr3 (69-123)||(46406445-46406499)
chr3 (69-123)||(49138779-49138833)
chr3 (83-140)||(41805511-41805568)
chr3 (73-126)||(49217260-49217313)
chr3 (165-201)||(14633125-14633161)
chr3 (73-140)||(7247707-7247774)
chr3 (73-140)||(24700891-24700958)
chr3 (73-140)||(34691795-34691862)
chr3 (74-140)||(4002884-4002949)
chr3 (73-126)||(13894396-13894449)
chr3 (454-509)||(34692117-34692173)
chr3 (454-509)||(55267900-55267956)
[»] chr2 (40 HSPs)
chr2 (271-568)||(17537530-17537827)
chr2 (271-568)||(6978123-6978417)
chr2 (271-568)||(23719722-23720015)
chr2 (271-568)||(24107394-24107687)
chr2 (271-568)||(34520339-34520634)
chr2 (271-562)||(10359173-10359462)
chr2 (271-477)||(5421711-5421918)
chr2 (299-568)||(33405042-33405307)
chr2 (2-208)||(5421989-5422194)
chr2 (2-208)||(37311062-37311265)
chr2 (39-204)||(17537290-17537455)
chr2 (2-208)||(23719445-23719651)
chr2 (2-208)||(24107117-24107323)
chr2 (453-568)||(37311445-37311560)
chr2 (271-381)||(37311336-37311445)
chr2 (70-208)||(34520132-34520268)
chr2 (70-208)||(10358963-10359102)
chr2 (485-529)||(5421390-5421434)
chr2 (69-125)||(8268601-8268657)
chr2 (70-126)||(14181684-14181740)
chr2 (69-140)||(43493121-43493192)
chr2 (68-126)||(39798607-39798665)
chr2 (69-126)||(22003252-22003309)
chr2 (69-140)||(23409341-23409410)
chr2 (73-140)||(35493178-35493245)
chr2 (73-140)||(40675906-40675973)
chr2 (72-126)||(29090745-29090799)
chr2 (71-124)||(2917840-2917893)
chr2 (69-126)||(3936028-3936085)
chr2 (69-126)||(17426216-17426273)
chr2 (164-208)||(33405483-33405528)
chr2 (73-126)||(41497642-41497695)
chr2 (73-140)||(23786295-23786362)
chr2 (93-208)||(6978488-6978604)
chr2 (69-123)||(43984155-43984209)
chr2 (73-126)||(3943041-3943094)
chr2 (69-122)||(28476922-28476975)
chr2 (73-126)||(16583444-16583498)
chr2 (454-500)||(19470435-19470483)
chr2 (69-114)||(34639176-34639221)
[»] scaffold0859 (1 HSPs)
scaffold0859 (39-201)||(1942-2105)
[»] scaffold0192 (1 HSPs)
scaffold0192 (71-140)||(16559-16628)
[»] scaffold0176 (1 HSPs)
scaffold0176 (69-126)||(3434-3491)
[»] scaffold0199 (1 HSPs)
scaffold0199 (73-126)||(10847-10900)
[»] scaffold0014 (1 HSPs)
scaffold0014 (69-126)||(84745-84802)
[»] scaffold0494 (1 HSPs)
scaffold0494 (69-126)||(5496-5553)
[»] scaffold0094 (1 HSPs)
scaffold0094 (69-125)||(56-112)


Alignment Details
Target: chr8 (Bit Score: 270; Significance: 1e-150; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 270; E-Value: 1e-150
Query Start/End: Original strand, 271 - 568
Target Start/End: Complemental strand, 26488044 - 26487747
Alignment:
Q  271 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgata 370  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26488044 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgata 26487945  T
Q  371 gaattgttacgattagttacgttataatttttaggattagtataggttttgataaattattgtagaattgttacgacatgatgtaggttttgatcgtcta 470  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||||| | |    
T  26487944 gaattgttacgattagttacggtataatttttaggattagtttaggttttgatgaattattgtagaattgttacgacatgatgtgggttttgatcgccga 26487845  T
Q  471 tttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaataagaagaaggagggtgacgacaagaagaaagaaaaatcgccgatgacatg 568  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26487844 tttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaacaagaagaaggagggtgacgacaagaagaaagaaaaatcgccgatgacatg 26487747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 271 - 507
Target Start/End: Original strand, 38032558 - 38032792
Alignment:
Q  271 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgata 370  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||  ||||||||||||    
T  38032558 tgaaattatggtagaatgtttaggattagatgaattgttgtataatcgctgcgattagtttatgtttgttatgaaattttgttgtt--gaatttgtgata 38032655  T
Q  371 gaattgttacgattagttacgttataatttttaggattagtataggttttgataaattattgtagaattgttacgacatgatgtaggttttgatcgtcta 470  Q
    ||||||||||||||||||||| ||||||||||||||||| | |||||| |||| |||| ||||||||||||||||||||||||||||||||||||||| |    
T  38032656 gaattgttacgattagttacggtataatttttaggattattttaggttatgatgaattgttgtagaattgttacgacatgatgtaggttttgatcgtcga 38032755  T
Q  471 tttgtttatgtagatatgtctcagaatcagggaaacg 507  Q
     |||||||||||||||||||||| |||||||||||||    
T  38032756 gttgtttatgtagatatgtctcaaaatcagggaaacg 38032792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 271 - 568
Target Start/End: Original strand, 42167585 - 42167855
Alignment:
Q  271 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgata 370  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||                |||||||||    
T  42167585 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtctgttatgaa----------------tttgtgata 42167668  T
Q  371 gaattgttacgattagttacgttataatttttaggattagtataggttttgataaattattgtagaattgttacgacatgatgtaggttttgatcgtcta 470  Q
    ||||||||||| |          |||  ||||||||||| | ||||||||||| |||||||||||||||||||||||||||||||||||||||||| | |    
T  42167669 gaattgttacggt----------atatattttaggattaatttaggttttgatgaattattgtagaattgttacgacatgatgtaggttttgatcgccga 42167758  T
Q  471 tttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaataagaagaaggagggtgacgacaagaagaaagaaaaatcgccgatgacatg 568  Q
     |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42167759 gttgttt-tgtagatatgtctcagaatcagggaaacgttgagttgaacaagaagaaggagggtgacgacaagaagaaagaaaaatcgccgatgacatg 42167855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 26488441 - 26488290
Alignment:
Q  1 gcataggagttaccaaaactccattgttacgnnnnnnngcttccataggtgcaaatttcacaaaccataagccattctaagccaatttcaagcacaaaat 100  Q
    ||||||||||| |||||||||||||||||||       |||||||||||||| || ||||||||||||||||||||| |||| |||||||||||||||||    
T  26488441 gcataggagtttccaaaactccattgttacgtttttt-gcttccataggtgcgaaattcacaaaccataagccattccaagctaatttcaagcacaaaat 26488343  T
Q  101 caagtaagttttttgaatcctattgcgttgctattttgtgattgatttgatag 153  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26488342 caagtaagttttttgaatcctattgcgttgctattttgtgattgatttgatag 26488290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 44 - 205
Target Start/End: Complemental strand, 26488281 - 26488118
Alignment:
Q  44 cataggtgcaaatttcacaaaccataagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtgatt 143  Q
    ||||||||| || ||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26488281 cataggtgcgaaattcacaaaccataagtcattccaagctaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtgatt 26488182  T
Q  144 gatttgatag--nnnnnnnnnngttaaattgcgattatagaggtttattgattttatgatgtta 205  Q
    ||||||||||            ||||||||| ||||||||||||||||||||||||||||||||    
T  26488181 gatttgatagtttttttttttggttaaattgtgattatagaggtttattgattttatgatgtta 26488118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 271 - 380
Target Start/End: Original strand, 19241352 - 19241460
Alignment:
Q  271 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgata 370  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  || ||    
T  19241352 tgaaattatggtagaatttttaggattggatgaattgttgtgtaatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaattattg-ta 19241450  T
Q  371 gaattgttac 380  Q
    ||||||||||    
T  19241451 gaattgttac 19241460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 271 - 380
Target Start/End: Original strand, 19314536 - 19314644
Alignment:
Q  271 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgata 370  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  || ||    
T  19314536 tgaaattatggtagaatttttaggattggatgaattgttgtgtaatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaattattg-ta 19314634  T
Q  371 gaattgttac 380  Q
    ||||||||||    
T  19314635 gaattgttac 19314644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 69 - 208
Target Start/End: Original strand, 19241143 - 19241281
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtgattgatttgatagnnnnnnnnnngttaa 168  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| |||          |||||    
T  19241143 aagccattccaagccaatttcaaacacaaaatcaagtaagttttttgaatcatattgcattgctattttgtgattgatttgttag-tttttttaggttaa 19241241  T
Q  169 attgcgattatagaggtttattgattttatgatgttatga 208  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  19241242 attgcgattatagaggtttattgattttatgatgttatga 19241281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 69 - 208
Target Start/End: Original strand, 19314327 - 19314465
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtgattgatttgatagnnnnnnnnnngttaa 168  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| |||          |||||    
T  19314327 aagccattccaagccaatttcaaacacaaaatcaagtaagttttttgaatcatattgcattgctattttgtgattgatttgttag-tttttttaggttaa 19314425  T
Q  169 attgcgattatagaggtttattgattttatgatgttatga 208  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  19314426 attgcgattatagaggtttattgattttatgatgttatga 19314465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 70 - 208
Target Start/End: Original strand, 38032377 - 38032513
Alignment:
Q  70 agccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtgattgatttgatagnnnnnnnnnngttaaa 169  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||          ||||||    
T  38032377 agccattccaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcattgctattttgtgatttatttgttag--tttttttggttaaa 38032474  T
Q  170 ttgcgattatagaggtttattgattttatgatgttatga 208  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  38032475 ttgcgattatataggtttattgattttatgatgttatga 38032513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 454 - 568
Target Start/End: Original strand, 19241462 - 19241576
Alignment:
Q  454 taggttttgatcgtctatttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaataagaagaaggagggtgacgacaagaagaaagaaaa 553  Q
    ||||||||||||| | |||||| |||| ||||||||||||||||||| |||||||||||||||| || |  |||||||||||||||||||||||||||||    
T  19241462 taggttttgatcgccaatttgtatatgcagatatgtctcagaatcagagaaacgttgagttgaacaacagaaaggagggtgacgacaagaagaaagaaaa 19241561  T
Q  554 atcgccgatgacatg 568  Q
    |||| ||||||||||    
T  19241562 atcgtcgatgacatg 19241576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 454 - 568
Target Start/End: Original strand, 19314646 - 19314760
Alignment:
Q  454 taggttttgatcgtctatttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaataagaagaaggagggtgacgacaagaagaaagaaaa 553  Q
    ||||||||||||| | |||||| |||| ||||||||||||||||||| |||||||||||||||| || |  |||||||||||||||||||||||||||||    
T  19314646 taggttttgatcgccaatttgtatatgcagatatgtctcagaatcagagaaacgttgagttgaacaacagaaaggagggtgacgacaagaagaaagaaaa 19314745  T
Q  554 atcgccgatgacatg 568  Q
    |||| ||||||||||    
T  19314746 atcgtcgatgacatg 19314760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 71 - 140
Target Start/End: Complemental strand, 38872847 - 38872778
Alignment:
Q  71 gccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtg 140  Q
    ||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||| ||| | |||||||    
T  38872847 gccattccaagccaatttcaatcacaaaaacaagtaagttttttgaatcctattgcattgttgttttgtg 38872778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 69 - 140
Target Start/End: Complemental strand, 22550772 - 22550701
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtg 140  Q
    ||||||||| ||||||||||||| ||||||| |||||||||||| ||||||||||||| ||| | |||||||    
T  22550772 aagccattccaagccaatttcaatcacaaaaacaagtaagttttctgaatcctattgcattgttgttttgtg 22550701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 68 - 123
Target Start/End: Original strand, 31170580 - 31170635
Alignment:
Q  68 taagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctat 123  Q
    |||| ||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  31170580 taagtcattccaagccaatttcaagcacaaaatcaagtaagtgttttgaatcctat 31170635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 41016579 - 41016636
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    ||||||||| ||||||||||||| ||||||| ||| ||||||||||||||||||||||    
T  41016579 aagccattccaagccaatttcaatcacaaaaacaattaagttttttgaatcctattgc 41016636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 126
Target Start/End: Complemental strand, 41276793 - 41276736
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    ||||||||| ||||||||||||| ||||||| |||||||||||||| |||||||||||    
T  41276793 aagccattccaagccaatttcaatcacaaaaacaagtaagtttttttaatcctattgc 41276736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 208
Target Start/End: Original strand, 42167399 - 42167514
Alignment:
Q  93 cacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtgattgatttgatagnnnnnnnnnngttaaattgcgattatagaggtttattga 192  Q
    |||||||||||||||||| ||   |||||||| | |||||||||||||| ||||||| ||            ||||||||||||||||||||||||||||    
T  42167399 cacaaaatcaagtaagttgttaacatcctattacattgctattttgtgaatgatttgttaaatttttttttattaaattgcgattatagaggtttattga 42167498  T
Q  193 ttttatgatgttatga 208  Q
    |||| |||||||||||    
T  42167499 ttttttgatgttatga 42167514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 126
Target Start/End: Complemental strand, 45066269 - 45066212
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    ||||||||  ||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  45066269 aagccattacaagccaatttcaatcacaaaaacaagtaagttttttgaatcctattgc 45066212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 71 - 145
Target Start/End: Original strand, 18438791 - 18438866
Alignment:
Q  71 gccattctaagccaatttcaagcacaaaatcaagtaagttttttgaat-cctattgcgttgctattttgtgattga 145  Q
    ||||||| ||||||||||||| ||||||| |||||||||||||||||| |||||||| ||| | ||||||| ||||    
T  18438791 gccattccaagccaatttcaatcacaaaaacaagtaagttttttgaatccctattgcattgttgttttgtggttga 18438866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 483981 - 484038
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    ||||||||  |||||||||| || ||||||| ||||||||||||||||||||||||||    
T  483981 aagccattagaagccaattttaatcacaaaaacaagtaagttttttgaatcctattgc 484038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 73 - 126
Target Start/End: Complemental strand, 26455579 - 26455526
Alignment:
Q  73 cattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    |||||| |||||||||||| ||||||| |||||||||||||| |||||||||||    
T  26455579 cattctcagccaatttcaatcacaaaaacaagtaagtttttttaatcctattgc 26455526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 69 - 126
Target Start/End: Complemental strand, 44052133 - 44052076
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    ||||||||  ||||||||||||| ||||||| |||||||||||||| |||||||||||    
T  44052133 aagccatttcaagccaatttcaatcacaaaaacaagtaagtttttttaatcctattgc 44052076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 73 - 140
Target Start/End: Original strand, 41855533 - 41855600
Alignment:
Q  73 cattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtg 140  Q
    ||||| || |||||||||| ||||||| |||||||||||||||||||| ||||| ||| | |||||||    
T  41855533 cattccaaaccaatttcaatcacaaaaacaagtaagttttttgaatcccattgcattgttgttttgtg 41855600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 143
Target Start/End: Complemental strand, 14120474 - 14120410
Alignment:
Q  78 taagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtgatt 143  Q
    ||||||||||  ||||| |||||||||||||| |||||||||||||||  ||||| ||||||||||    
T  14120474 taagccaattctaagca-aaaatcaagtaagtgttttgaatcctattgtattgctgttttgtgatt 14120410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 15031049 - 15031105
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    ||||||||  ||||||||||||| ||||||| |||||||| |||||||||||||||||    
T  15031049 aagccattacaagccaatttcaatcacaaaaacaagtaag-tttttgaatcctattgc 15031105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 28168506 - 28168454
Alignment:
Q  73 cattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattg 125  Q
    ||||| ||||||||||||| ||||||| ||||||||||||||||  |||||||    
T  28168506 cattccaagccaatttcaatcacaaaaacaagtaagttttttgagccctattg 28168454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 140
Target Start/End: Complemental strand, 40704063 - 40703997
Alignment:
Q  73 cattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtg 140  Q
    ||||| ||||||||||||| ||||||| ||||||||| ||||||||| |||||| ||| | |||||||    
T  40704063 cattccaagccaatttcaatcacaaaaacaagtaagt-ttttgaatcatattgcattgttgttttgtg 40703997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 126
Target Start/End: Complemental strand, 42605138 - 42605085
Alignment:
Q  73 cattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    ||||| ||||||||||||| |||| ||  |||||||||||||||||| ||||||    
T  42605138 cattccaagccaatttcaatcacagaaataagtaagttttttgaatcatattgc 42605085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 262; Significance: 1e-146; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 271 - 568
Target Start/End: Original strand, 7484114 - 7484411
Alignment:
Q  271 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgata 370  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7484114 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgata 7484213  T
Q  371 gaattgttacgattagttacgttataatttttaggattagtataggttttgataaattattgtagaattgttacgacatgatgtaggttttgatcgtcta 470  Q
    ||||||||||||||||||||| ||||| ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| | |    
T  7484214 gaattgttacgattagttacggtataacttttaggattagtttaggttttgatgaattattgtagaattgttacgacatgatgtaggttttgatcgccga 7484313  T
Q  471 tttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaataagaagaaggagggtgacgacaagaagaaagaaaaatcgccgatgacatg 568  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  7484314 tttgtttatgtagatatgtctcagaataagggaaacgttgagttgaacaagaagaaggagggtgacgacaagaagaaagaaaaattgccgatgacatg 7484411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 230; E-Value: 1e-126
Query Start/End: Original strand, 271 - 568
Target Start/End: Original strand, 6792068 - 6792365
Alignment:
Q  271 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgata 370  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  6792068 tgaaatgatggtggaatttttaggattagatgaattgttgtataatcgttgcgattagtttaagtttgttttgaaattttgttgttatgaatttgtgata 6792167  T
Q  371 gaattgttacgattagttacgttataatttttaggattagtataggttttgataaattattgtagaattgttacgacatgatgtaggttttgatcgtcta 470  Q
    ||||||||||||||||||| | ||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||||| | |    
T  6792168 gaattgttacgattagttatggtataatttttaggattagtttaggttttgatgaattattgtagaattgttatgacatgatgtaggttttgatcgccga 6792267  T
Q  471 tttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaataagaagaaggagggtgacgacaagaagaaagaaaaatcgccgatgacatg 568  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||||| |||| |||||||||||||| |||||||||||    
T  6792268 tttgtttatgtagatatgtcttagaatcagggaaacgtcgagttgaacaagaagaaggagggtgacaacaaaaagaaagaaaaatcaccgatgacatg 6792365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 271 - 529
Target Start/End: Original strand, 41088482 - 41088738
Alignment:
Q  271 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgata 370  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41088482 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgata 41088581  T
Q  371 gaattgttacgattagttacgttataatttttaggattagtataggttttgataaattattgtagaattgttacgacatgatgtaggttttgatcgtcta 470  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  41088582 gaattgttacgattagttacgttataatttttaggattagtttaggttttgatgaattattgtagaattgatacgacatgatgtaggttttgatcgtcta 41088681  T
Q  471 tttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaataagaagaagga 529  Q
    |||||||||||||  ||||||||| |||||||||||||||||||||| |||||||||||    
T  41088682 tttgtttatgtag--atgtctcagtatcagggaaacgttgagttgaacaagaagaagga 41088738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 271 - 568
Target Start/End: Complemental strand, 1972966 - 1972668
Alignment:
Q  271 tgaaattatggtagaatttttaggattagatgaattgttgt---ataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtg 367  Q
    |||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||  ||||||||     
T  1972966 tgaaattatggtagaatttttaggattagatgaattgttgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgtt--gaatttgta 1972869  T
Q  368 atagaattgttacgattagttacgttataatttttaggattagtataggttttgataaattattgtagaattgttacgacatgatgtaggttttgatcgt 467  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||| |||| |||||||||| |||||||||||||||||||||||||||||||     
T  1972868 atagaattgttacgattagttacggtataatttttaggattagtttaggttatgatcaattattgtataattgttacgacatgatgtaggttttgatcgc 1972769  T
Q  468 ctatttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaataagaagaaggagggtgacgacaagaagaaagaaaaatcgccgatgacat 567  Q
    | |||| ||||||||||||||||| ||||| |||||||||||||| |||| ||||||||||||||||||| || ||||||||||||||| | ||||||||    
T  1972768 cgatttatttatgtagatatgtctaagaattagggaaacgttgaggtgaacaagaagaaggagggtgacggcaggaagaaagaaaaatcactgatgacat 1972669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 271 - 567
Target Start/End: Original strand, 4722725 - 4723008
Alignment:
Q  271 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgata 370  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4722725 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgata 4722824  T
Q  371 gaattgttacgattagttacgttataatttttaggattagtataggttttgataaattattgtagaattgttacgacatgatgtaggttttgatcgtcta 470  Q
    || |||||||| |          |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||| | |    
T  4722825 gagttgttacggt----------ataatttttaggattagtttaggttttgatgaattattgtagaattgttacgacatggtgtaggttttgatcgccga 4722914  T
Q  471 tttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaataagaagaaggagggtgacgacaagaagaaagaaaaatcgccgatgacat 567  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||   || || ||||||||||||||||||||||||||||| |||||||||||||    
T  4722915 tttgtttatttagatatgtctcagaatcagggaaacattgagttg---aacaaaaaggagggtgacgacaagaagaaagaaaattcgccgatgacat 4723008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 143; E-Value: 9e-75
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 41088232 - 41088437
Alignment:
Q  1 gcataggagttaccaaaactccattgttacgnnnnnnngcttccataggtgcaaatttcacaaaccataagccattctaagccaatttcaagcacaaaat 100  Q
    |||||||||||||||||||||||||||||||       |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  41088232 gcataggagttaccaaaactccattgttacgtttttt-gcttccataggtgcgaatttcacaaaccataagccattctaagccaatttcaagcacaaaat 41088330  T
Q  101 caagtaagttttttgaatcctattgcgttgctattttgtgattgatttgatagnnnnnnnnnngttaaattgcgattatagaggtttattgattttatga 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||    
T  41088331 caagtaagttttttgaatcctattgcgttgctattttgtgattgatttgatag-gtttttttggttaaattgcgattatagaggtttattgattttatga 41088429  T
Q  201 tgttatga 208  Q
    ||||||||    
T  41088430 tgttatga 41088437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 7483856 - 7484061
Alignment:
Q  1 gcataggagttaccaaaactccattgttacgnnnnnnngcttccataggtgcaaatttcacaaaccataagccattctaagccaatttcaagcacaaaat 100  Q
    ||||||||||| |||||||||||||||||||       |||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||||||    
T  7483856 gcataggagtttccaaaactccattgttacgtttttt-gcttccataggtgcgaatttcacaaaccataagccatttcaagccaatttcaagcacaaaat 7483954  T
Q  101 caagtaagttttttgaatcctattgcgttgctattttgtgattgatttgatagnnnnnnnnnngttaaattgcgattatagaggtttattgattttatga 200  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| |          ||||||||| ||||||||| |||||||||||||||||    
T  7483955 caagtaagtttttttaatcctattgcgttgctattttgtgattgatttgat-ggttttttttggttaaattgtgattatagaagtttattgattttatga 7484053  T
Q  201 tgttatga 208  Q
    ||||||||    
T  7484054 tgttatga 7484061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 271 - 384
Target Start/End: Complemental strand, 40937021 - 40936908
Alignment:
Q  271 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgata 370  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||    
T  40937021 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttacaattagtttaggtttgttatgaaattttgttgtcatgaatttgtgata 40936922  T
Q  371 gaattgttacgatt 384  Q
    ||||||||||||||    
T  40936921 gaattgttacgatt 40936908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 1696599 - 1696394
Alignment:
Q  1 gcataggagttaccaaaactccattgttacgnnnnnnngcttccataggtgcaaatttcacaaaccataagccattctaagccaatttcaagcacaaaat 100  Q
    ||||||||||| |||||||||| ||||||||       |||||||||||||| |||||||| ||  ||||||||||| ||| ||||||||||||||||||    
T  1696599 gcataggagtttccaaaactcctttgttacgtttttt-gcttccataggtgcgaatttcacgaagaataagccattccaagtcaatttcaagcacaaaat 1696501  T
Q  101 caagtaagttttttgaatcctattgcgttgctattttgtgattgatttgatagnnnnnnnnnngttaaattgcgattatagaggtttattgattttatga 200  Q
    ||| |||||||||||||||||||||| |||||||||||||||||||||| |||          |||||||||||||||||||||| ||||||||||||||    
T  1696500 caattaagttttttgaatcctattgcattgctattttgtgattgatttgttag-ttttttttggttaaattgcgattatagaggtatattgattttatga 1696402  T
Q  201 tgttatga 208  Q
    ||||||||    
T  1696401 tgttatga 1696394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 39 - 204
Target Start/End: Original strand, 6791857 - 6792021
Alignment:
Q  39 gcttccataggtgcaaatttcacaaaccataagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttg 138  Q
    |||| ||||||||| ||||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  6791857 gctttcataggtgcgaatttcataaagcataagtcattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcattgctattttg 6791956  T
Q  139 tgattgatttgatagnnnnnnnnnngttaaattgcgattatagaggtttattgattttatgatgtt 204  Q
    ||||| ||||| |||          |||||||||||||||||||||||||||||||||||||||||    
T  6791957 tgattaatttgttag-ttttttttggttaaattgcgattatagaggtttattgattttatgatgtt 6792021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 36348728 - 36348933
Alignment:
Q  1 gcataggagttaccaaaactccattgttacgnnnnnnngcttccataggtgcaaatttcacaaaccataagccattctaagccaatttcaagcacaaaat 100  Q
    ||||||||||| |||||||||||||||||||       |||||||||| ||  ||||||||||| |||||  ||||| ||||||||||||||||||||||    
T  36348728 gcataggagtttccaaaactccattgttacgtttttt-gcttccatagatgtgaatttcacaaagcataaatcattccaagccaatttcaagcacaaaat 36348826  T
Q  101 caagtaagttttttgaatcctattgcgttgctattttgtgattgatttgatagnnnnnnnnnngttaaattgcgattatagaggtttattgattttatga 200  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||| |||          |||||||||| ||||||||||||||||||||||||||    
T  36348827 caagtaagttttttgaattctattgcattgctattttgtgattgatttgttag-ttttgtttggttaaattgcaattatagaggtttattgattttatga 36348925  T
Q  201 tgttatga 208  Q
    ||||||||    
T  36348926 tgttatga 36348933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 54 - 208
Target Start/End: Complemental strand, 40937245 - 40937092
Alignment:
Q  54 aatttcacaaaccataagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtgattgatttgatag 153  Q
    ||||||||||| |||||| |  || |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||    
T  40937245 aatttcacaaagcataagtctatccaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcattgctattttgtgattgatttgttag 40937146  T
Q  154 nnnnnnnnnngttaaattgcgattatagaggtttattgattttatgatgttatga 208  Q
              |||||||||||||||||||||||||||||||||||||||||||||    
T  40937145 -ttttttttggttaaattgcgattatagaggtttattgattttatgatgttatga 40937092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 588 - 681
Target Start/End: Original strand, 41088742 - 41088835
Alignment:
Q  588 caagtagcattttttagaggcttgtaattcgtagcagtttgtatttcattcttttatcaagtgattgtaagcaggtagatggttccaatgaagt 681  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41088742 caagtagcattttttagaggcttgcaattcgtagcagtttgtatttcattcttttatcaagtgattgtaagcaggtagatggttccaatgaagt 41088835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 453 - 568
Target Start/End: Complemental strand, 1696214 - 1696099
Alignment:
Q  453 gtaggttttgatcgtctatttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaataagaagaaggagggtgacgacaagaagaaagaaa 552  Q
    |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| || |  ||||||||||||||||||||||||||||    
T  1696214 gtaggttttgatcgccaatttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaacaacagaaaggagggtgacgacaagaagaaagaaa 1696115  T
Q  553 aatcgccgatgacatg 568  Q
    ||||| ||||||||||    
T  1696114 aatcgtcgatgacatg 1696099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 271 - 381
Target Start/End: Complemental strand, 1696323 - 1696214
Alignment:
Q  271 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgata 370  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||  || ||    
T  1696323 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaagtttgttatgaaattttgttgttacgaattattg-ta 1696225  T
Q  371 gaattgttacg 381  Q
    |||||||||||    
T  1696224 gaattgttacg 1696214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 271 - 381
Target Start/End: Original strand, 36349004 - 36349113
Alignment:
Q  271 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgata 370  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  || ||    
T  36349004 tgaaattatggtagaatttttaggattagatgaattattgtataatcgttgcgattagtttaggtttgttatgaaattttattgttatgaattattg-ta 36349102  T
Q  371 gaattgttacg 381  Q
    |||||||||||    
T  36349103 gaattgttacg 36349113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 90 - 208
Target Start/End: Original strand, 4722512 - 4722631
Alignment:
Q  90 aagcacaaaatcaagtaagtttt-ttgaatcctattgcgttgctattttgtgattgatttgatagnnnnnnnnnngttaaattgcgattatagaggttta 188  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||    
T  4722512 aagcacaaaatcaagtaagtttttttgaatcctattgcgttgctattttgtgattgatttgatagtttttttttggttaaattgcgattatagaggttta 4722611  T
Q  189 ttgattttatgatgttatga 208  Q
    ||||||||||||||||||||    
T  4722612 ttgattttatgatgttatga 4722631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 460 - 568
Target Start/End: Original strand, 36349114 - 36349222
Alignment:
Q  460 ttgatcgtctatttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaataagaagaaggagggtgacgacaagaagaaagaaaaatcgcc 559  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| || |  ||||||||| |||||| ||||||||||||||||||    
T  36349114 ttgatcgccaatttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaacaacagaaaggagggtcacgacaggaagaaagaaaaatcgcc 36349213  T
Q  560 gatgacatg 568  Q
    |||||||||    
T  36349214 gatgacatg 36349222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 71 - 149
Target Start/End: Complemental strand, 1973164 - 1973086
Alignment:
Q  71 gccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtgattgatttg 149  Q
    ||||||| |||| |||||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||    
T  1973164 gccattccaagctaatttcaagcacaaaatcaagtaaattttttgaatcctatggcattgctattttgtgattgatttg 1973086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 589 - 680
Target Start/End: Original strand, 41103171 - 41103262
Alignment:
Q  589 aagtagcattttttagaggcttgtaattcgtagcagtttgtatttcattcttttatcaagtgattgtaagcaggtagatggttccaatgaag 680  Q
    |||| ||||||||  ||| ||||||||||||||||||||| ||||||||||||  |||||||||||| |||||| |||||||||||||||||    
T  41103171 aagtggcatttttgtgagacttgtaattcgtagcagtttgcatttcattctttagtcaagtgattgtgagcagggagatggttccaatgaag 41103262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 289 - 388
Target Start/End: Original strand, 13130108 - 13130204
Alignment:
Q  289 tttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgatagaattgttacgattagtt 388  Q
    |||||| || |||||||||||||| |||  ||  ||||||||||||||| |||||||   ||||||||||||||||||||||||||||||| ||||||||    
T  13130108 tttaggttttgatgaattgttgtagaatttttaggattagtttaggttttttatgaa---ttgttgttatgaatttgtgatagaattgttaggattagtt 13130204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 5961 - 6018
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    ||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  5961 aagccattccaagccaatttcaatcacaaaaacaagtaagttttttgaatcctattgc 6018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 71 - 140
Target Start/End: Complemental strand, 18309963 - 18309894
Alignment:
Q  71 gccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtg 140  Q
    ||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||| ||| | |||||||    
T  18309963 gccattccaagccaatttcaatcacaaaaacaagtaagttttttgaatcctattgcattgttgttttgtg 18309894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 79 - 151
Target Start/End: Complemental strand, 25499785 - 25499713
Alignment:
Q  79 aagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtgattgatttgat 151  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||| ||| | ||||||| |||| |||||    
T  25499785 aagccaatttcaatcacaaaaacaagtaagttttttgaatcctattgcattgttgttttgtggttgaattgat 25499713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 68 - 145
Target Start/End: Complemental strand, 23190751 - 23190674
Alignment:
Q  68 taagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtgattga 145  Q
    |||||||||| |||||||||||||||||||||| ||||||||| ||   |||||||||| ||| | ||||||||||||    
T  23190751 taagccattccaagccaatttcaagcacaaaattaagtaagttgttatcatcctattgcattgttgttttgtgattga 23190674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 126
Target Start/End: Complemental strand, 38855619 - 38855562
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    ||||||||  ||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  38855619 aagccattacaagccaatttcaatcacaaaaacaagtaagttttttgaatcctattgc 38855562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 73 - 140
Target Start/End: Original strand, 541093 - 541160
Alignment:
Q  73 cattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtg 140  Q
    ||||| ||||||||||||| ||||||| |||||||||||| ||||||||||||| ||| | |||||||    
T  541093 cattccaagccaatttcaatcacaaaaacaagtaagttttctgaatcctattgcattgttgttttgtg 541160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 79 - 126
Target Start/End: Complemental strand, 11028902 - 11028855
Alignment:
Q  79 aagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  11028902 aagccaatttcaatcacaaaaacaagtaagttttttgaatcctattgc 11028855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 69 - 140
Target Start/End: Original strand, 41201893 - 41201964
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtg 140  Q
    |||||||| |||||||||||||| |||||||  ||||||||||||| ||||||||||| ||| | |||||||    
T  41201893 aagccattttaagccaatttcaatcacaaaaataagtaagttttttaaatcctattgcattgttgttttgtg 41201964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 164 - 206
Target Start/End: Original strand, 11357187 - 11357229
Alignment:
Q  164 gttaaattgcgattatagaggtttattgattttatgatgttat 206  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  11357187 gttaaattgcgattatagagatttattgattttatgatgttat 11357229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 8574886 - 8574943
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    ||||||||  ||||||||||||| ||||||| ||||||||||||||||||| ||||||    
T  8574886 aagccattacaagccaatttcaatcacaaaaacaagtaagttttttgaatcttattgc 8574943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 19035403 - 19035460
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    ||||||||  |||||||||| || ||||||| ||||||||||||||||||||||||||    
T  19035403 aagccattagaagccaattttaatcacaaaaacaagtaagttttttgaatcctattgc 19035460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 73 - 142
Target Start/End: Complemental strand, 20200063 - 20199994
Alignment:
Q  73 cattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtgat 142  Q
    ||||| ||||||||||||| ||||||| ||||||| ||||||||||| |||||| ||| | |||||||||    
T  20200063 cattccaagccaatttcaatcacaaaaacaagtaaattttttgaatcttattgcattgttgttttgtgat 20199994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 27660105 - 27660162
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    ||||||||  ||||||||||||| ||||||| ||||||||||||||||||| ||||||    
T  27660105 aagccattacaagccaatttcaatcacaaaaacaagtaagttttttgaatcttattgc 27660162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 588 - 675
Target Start/End: Original strand, 1216535 - 1216623
Alignment:
Q  588 caagtagcatttttta-gaggcttgtaattcgtagcagtttgtatttcattcttttatcaagtgattgtaagcaggtagatggttccaa 675  Q
    |||||||| ||||||  |||| ||||||||||||||| |||| |||| |||||||  |||||||||||| |||||| ||| ||||||||    
T  1216535 caagtagccttttttgtgaggattgtaattcgtagcaatttgcatttaattctttactcaagtgattgtgagcagggagaaggttccaa 1216623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 3603064 - 3603009
Alignment:
Q  71 gccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    ||||||| ||||||||||||| ||||||| |||||||||| |||||||| ||||||    
T  3603064 gccattccaagccaatttcaatcacaaaaacaagtaagttctttgaatcatattgc 3603009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 396 - 443
Target Start/End: Complemental strand, 23190551 - 23190504
Alignment:
Q  396 aatttttaggattagtataggttttgataaattattgtagaattgtta 443  Q
    |||||||||||||||| ||||||||||| |||| ||||||||||||||    
T  23190551 aatttttaggattagtttaggttttgatgaattgttgtagaattgtta 23190504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 206
Target Start/End: Complemental strand, 11357053 - 11357011
Alignment:
Q  164 gttaaattgcgattatagaggtttattgattttatgatgttat 206  Q
    |||||||||| ||||||||| ||||||||||||||||||||||    
T  11357053 gttaaattgcaattatagagatttattgattttatgatgttat 11357011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 593 - 671
Target Start/End: Original strand, 41080772 - 41080850
Alignment:
Q  593 agcattttttagaggcttgtaattcgtagcagtttgtatttcattcttttatcaagtgattgtaagcaggtagatggtt 671  Q
    |||||||||  |||||||||||||| ||| |||||| ||||||||||||  |||| ||||||| |||| | ||||||||    
T  41080772 agcatttttatgaggcttgtaattcatagaagtttgcatttcattctttagtcaattgattgtgagcaaggagatggtt 41080850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 126
Target Start/End: Complemental strand, 8539447 - 8539394
Alignment:
Q  73 cattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    ||||| || |||||| ||| ||||||| ||||||||||||||||||||||||||    
T  8539447 cattccaaaccaattccaatcacaaaaacaagtaagttttttgaatcctattgc 8539394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 126
Target Start/End: Complemental strand, 11348409 - 11348352
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    |||| |||| ||||||||||||| ||||||| ||||||||| |||| |||||||||||    
T  11348409 aagctattccaagccaatttcaatcacaaaaacaagtaagtgtttttaatcctattgc 11348352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 114
Target Start/End: Original strand, 41798988 - 41799029
Alignment:
Q  73 cattctaagccaatttcaagcacaaaatcaagtaagtttttt 114  Q
    ||||| ||||||||||||| ||||||| ||||||||||||||    
T  41798988 cattccaagccaatttcaatcacaaaaacaagtaagtttttt 41799029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 454 - 509
Target Start/End: Complemental strand, 11348072 - 11348016
Alignment:
Q  454 taggttttgatcgtctatttgttta-tgtagatatgtctcagaatcagggaaacgtt 509  Q
    ||||||||||||| |  ||| |||| |||||||||||||||||||||||| ||||||    
T  11348072 taggttttgatcgccattttttttaatgtagatatgtctcagaatcagggtaacgtt 11348016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 69 - 125
Target Start/End: Complemental strand, 30711068 - 30711012
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattg 125  Q
    ||||||||  |||||||||| ||  |||||| |||||||||||||||||| ||||||    
T  30711068 aagccattacaagccaattttaataacaaaaacaagtaagttttttgaattctattg 30711012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 84 - 140
Target Start/End: Original strand, 34682437 - 34682493
Alignment:
Q  84 aatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtg 140  Q
    |||||||| ||||| | |||||||||||||||||| ||||||| ||| | |||||||    
T  34682437 aatttcaatcacaagaacaagtaagttttttgaattctattgcattgttgttttgtg 34682493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 260; Significance: 1e-144; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 260; E-Value: 1e-144
Query Start/End: Original strand, 273 - 568
Target Start/End: Complemental strand, 35186587 - 35186292
Alignment:
Q  273 aaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgataga 372  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35186587 aaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgataga 35186488  T
Q  373 attgttacgattagttacgttataatttttaggattagtataggttttgataaattattgtagaattgttacgacatgatgtaggttttgatcgtctatt 472  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||||  | |||    
T  35186487 attgttacgattagttacggtataatttttaggattagtttaggttttgatgaattattgtataattgttacgacatgatgtaggttttgatctccgatt 35186388  T
Q  473 tgtttatgtagatatgtctcagaatcagggaaacgttgagttgaataagaagaaggagggtgacgacaagaagaaagaaaaatcgccgatgacatg 568  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  35186387 tgtttatgtagatatgtctcagaatcagggaaacgttgagttgaacaagaagaaggagggtgacgacaagaagaaagaaaaatcaccgatgacatg 35186292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 271 - 568
Target Start/End: Original strand, 38043826 - 38044123
Alignment:
Q  271 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgata 370  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38043826 tgaaattatggtagaatttttaggattagatgagttgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgata 38043925  T
Q  371 gaattgttacgattagttacgttataatttttaggattagtataggttttgataaattattgtagaattgttacgacatgatgtaggttttgatcgtcta 470  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||   |    
T  38043926 gaattgttacgattagttacggtataatttttaggattagtttaggttttgatgaattattgtagaattgttacgacatgatgtaggttttgatcgcaga 38044025  T
Q  471 tttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaataagaagaaggagggtgacgacaagaagaaagaaaaatcgccgatgacatg 568  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||    
T  38044026 tatgtttatgtagatatgtctcagaatcagggaaacgttgagttgaataagaagaatgagggtgacggcaagaagaaagaaaaatcgtcgatgacatg 38044123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 250; E-Value: 1e-138
Query Start/End: Original strand, 271 - 568
Target Start/End: Original strand, 39855865 - 39856162
Alignment:
Q  271 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgata 370  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||    
T  39855865 tgaaattatggtagaatttttatgattagatgaattgttgtataatcgttgcgattagtttatgtttgttatgaaattttgttgttatgaatttgtggta 39855964  T
Q  371 gaattgttacgattagttacgttataatttttaggattagtataggttttgataaattattgtagaattgttacgacatgatgtaggttttgatcgtcta 470  Q
    ||||| ||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| | |    
T  39855965 gaattattacgattagttacggtataatttttaggattagtttaggttttgatgaattattgtagaattgttacgacatgatgtaggttttgatcgccga 39856064  T
Q  471 tttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaataagaagaaggagggtgacgacaagaagaaagaaaaatcgccgatgacatg 568  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  39856065 tttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaacaagaagaaggagggtgatgacaagaagaaagaaaaatcgctgatgacatg 39856162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 271 - 568
Target Start/End: Original strand, 15355407 - 15355703
Alignment:
Q  271 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgata 370  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  15355407 tgaaattatggtagaatttttaggattagatgaattattgtataatcgttgcgattagtttaggtttgttatgaaattctgttgttatgaatttgtgata 15355506  T
Q  371 gaattgttacgattagttacgttataatttttaggattagtataggttttgataaattattgtagaattgttacgacatgatgtaggttttgatcgtcta 470  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| | |    
T  15355507 gaattgttacgattagttacggtataatttttaggattagtttaggttttgatgaattattgtagaattgttacgacatgatgtaggttttgatcgccga 15355606  T
Q  471 tttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaataagaagaaggagggtgacgacaagaagaaagaaaaatcgccgatgacatg 568  Q
    |||||||||||||||||||||| |||||| ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  15355607 tttgtttatgtagatatgtctcggaatca-ggacacgttgagttgaacaagaagaaggagggtgacgacaagaagaaagaaaaatcaccgatgacatg 15355703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 271 - 568
Target Start/End: Original strand, 49260303 - 49260598
Alignment:
Q  271 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgata 370  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  49260303 tgaaattatggtaaaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgtt--gaatttgtgata 49260400  T
Q  371 gaattgttacgattagttacgttataatttttaggattagtataggttttgataaattattgtagaattgttacgacatgatgtaggttttgatcgtcta 470  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||| |||| |||||||||||||||||||||||||||||||||||||||||| | |    
T  49260401 gaattgttacgattagttacggtataatttttaggattagtttaggttatgatgaattattgtagaattgttacgacatgatgtaggttttgatcgccaa 49260500  T
Q  471 tttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaataagaagaaggagggtgacgacaagaagaaagaaaaatcgccgatgacatg 568  Q
     ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  49260501 gttgtttatgtagatatgtctcagaatcagggaaacgttgaggtgaacaagaagaaggagggtgacgacaagaagaaagaaaaatcaccgatgacatg 49260598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 273 - 568
Target Start/End: Original strand, 24268996 - 24269287
Alignment:
Q  273 aaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgataga 372  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24268996 aaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgataga 24269095  T
Q  373 attgttacgattagttacgttataatttttaggattagtataggttttgataaattattgtagaattgttacgacatgatgtaggttttgatcgtctatt 472  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||| | | |||    
T  24269096 attgttacgattagttacgttataatttttaggattagtttaggttttgatgaattattgtagaattgttatgacatgatgtaggttttgattgccgatt 24269195  T
Q  473 tgtttatgtagatatgtctcagaatcagggaaacgttgagttgaataagaagaaggagggtgacgacaagaagaaagaaaaatcgccgatgacatg 568  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||    |||||||||| ||||||||||||||||||| ||| |||||||||    
T  24269196 tgtttatgtagatatgtctcagaatcagggaaacgttgagttgaacaa----aaggagggtggcgacaagaagaaagaaaaaacgctgatgacatg 24269287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 271 - 568
Target Start/End: Complemental strand, 23344102 - 23343808
Alignment:
Q  271 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgata 370  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  23344102 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttatatttgttatgaaattttgttgttatgaatttgtgata 23344003  T
Q  371 gaattgttacgattagttacgttataatttttaggattagtataggttttgataaattattgtagaattgttacgacatgatgtaggttttgatcgtcta 470  Q
    ||||||||||||||| ||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| | |    
T  23344002 gaattgttacgattaattacggtataatttttaggattagtttaggttttgatgaattattgtagaattgttacgacatgatgtaggttttgatcgccga 23343903  T
Q  471 tttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaataagaagaaggagggtgacgacaagaagaaagaaaaatcgccgatgacatg 568  Q
    ||||||||||||||||||| ||| |||||||||||||||||| ||   || || ||||||||||||||||||||||| ||||||||| ||||||||||    
T  23343902 tttgtttatgtagatatgtttcaaaatcagggaaacgttgaggtg---aacaaaaaggagggtgacgacaagaagaatgaaaaatcgtcgatgacatg 23343808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 274 - 568
Target Start/End: Original strand, 17684957 - 17685248
Alignment:
Q  274 aattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgatagaa 373  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  17684957 aattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaagtttgttatgaaattttgttgttatgaatttgtgatagaa 17685056  T
Q  374 ttgttacgattagttacgttataatttttaggattagtataggttttgataaattattgtagaattgttacgacatgatgtaggttttgatcgtctattt 473  Q
    |||||||||||||||||| ||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||||| | ||||    
T  17685057 ttgttacgattagttacggtataatttttaggatcagtttaggttttgatgaattattgtagaattgttacgacatgatttaggttttgatcgccgattt 17685156  T
Q  474 gtttatgtagatatgtctcagaatcagggaaacgttgagttgaataagaagaaggagggtgacgacaagaagaaagaaaaatcgccgatgacatg 568  Q
    || ||||||||||||||| | ||||||| |||||||||||||   || || ||| ||||||| |||||||||||| |||||||| ||||||||||    
T  17685157 gtatatgtagatatgtcttataatcaggaaaacgttgagttg---aacaaaaagtagggtgatgacaagaagaaaaaaaaatcgtcgatgacatg 17685248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 271 - 527
Target Start/End: Original strand, 35585539 - 35585798
Alignment:
Q  271 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgata 370  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||    
T  35585539 tgaaattatggtagaatttttagtattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttttgaatttgttata 35585638  T
Q  371 gaattgttacgattagttacgttataatttttaggattagtataggttttgataaattattgtagaattgttacgacatgatgtaggttttga---tcgt 467  Q
    ||||||| || |||||||||| ||||||||||| ||||||| ||||| ||||| ||||||||||||||||||||||| |||||||||||||||   |||     
T  35585639 gaattgtcacaattagttacggtataatttttatgattagtttaggtcttgatgaattattgtagaattgttacgacgtgatgtaggttttgatattcgc 35585738  T
Q  468 ctatttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaataagaagaag 527  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  35585739 cgatttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaacaagaagaag 35585798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 160; E-Value: 7e-85
Query Start/End: Original strand, 273 - 468
Target Start/End: Original strand, 33286043 - 33286238
Alignment:
Q  273 aaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgataga 372  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  33286043 aaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggattgatatgaaattttgttgttatgaatttgtgataga 33286142  T
Q  373 attgttacgattagttacgttataatttttaggattagtataggttttgataaattattgtagaattgttacgacatgatgtaggttttgatcgtc 468  Q
    ||||||||||||||||||| |||||||||||||||||    |||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  33286143 attgttacgattagttacggtataatttttaggattaaataaggttttgatgaattattgtagaattgttacgacatgatgtagattttgatcgtc 33286238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 2 - 208
Target Start/End: Original strand, 38043550 - 38043755
Alignment:
Q  2 cataggagttaccaaaactccattgttacgnnnnnnngcttccataggtgcaaatttcacaaaccataagccattctaagccaatttcaagcacaaaatc 101  Q
    |||||||||| |||||||||||||||||||       |||||||||||||| |||||||||||||||||| ||||| ||||||||||||| |||||||||    
T  38043550 cataggagtttccaaaactccattgttacgtttttt-gcttccataggtgcgaatttcacaaaccataagtcattccaagccaatttcaaacacaaaatc 38043648  T
Q  102 aagtaagttttttgaatcctattgcgttgctattttgtgattgatttgatagnnnnnnnnnngttaaattgcgattatagaggtttattgattttatgat 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||           ||||||||| ||||||||||||||||||||||||||||    
T  38043649 aagtaagttttttgaatcctattgcgttgctattttgtgattgatttgatatttttttttttgttaaattgtgattatagaggtttattgattttatgat 38043748  T
Q  202 gttatga 208  Q
    |||||||    
T  38043749 gttatga 38043755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 393 - 568
Target Start/End: Complemental strand, 37779608 - 37779437
Alignment:
Q  393 tataatttttaggattagtataggttttgataaattattgtagaattgttacgacatgatgtaggttttgatcgtctatttgtttatgtagatatgtctc 492  Q
    ||||||||||||||||||| |||||||| || ||||||||||||||||||||| |||||||||||||||||||| | |||||||||||||||||||||||    
T  37779608 tataatttttaggattagtttaggttttaatgaattattgtagaattgttacg-catgatgtaggttttgatcgccgatttgtttatgtagatatgtctc 37779510  T
Q  493 agaatcagggaaacgttgagttgaataagaagaaggagggtgacgacaagaagaaagaaaaatcgccgatgacatg 568  Q
    |||||||||||||||||||| ||   || || ||||||||||||||||||||||||||||||||||||||||||||    
T  37779509 agaatcagggaaacgttgagctg---aacaaaaaggagggtgacgacaagaagaaagaaaaatcgccgatgacatg 37779437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 39855588 - 39855794
Alignment:
Q  1 gcataggagttaccaaaactccattgttacgnnnnnnngcttccataggtgcaaatttcacaaaccataagccattctaagccaatttcaagcacaaaa- 99  Q
    ||||||||||| |||||||||||||||||||       |||||||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||     
T  39855588 gcataggagtttccaaaactccattgttacgtttttt-gcttccataggtgcgaatttcacaaaccataagtcattccaagccaatttcaagcacaaaaa 39855686  T
Q  100 tcaagtaagttttttgaatcctattgcgttgctattttgtgattgatttgatagnnnnnnnnnngttaaattgcgattatagaggtttattgattttatg 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||| |||||||||||||||| |||||||||    
T  39855687 tcaagtaagttttttgaatcctattgcgttgctattttgtgattgatttgatag-tttttttttgttaaattgtgattatagaggtttatggattttatg 39855785  T
Q  200 atgttatga 208  Q
    |||||||||    
T  39855786 atgttatga 39855794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 2 - 208
Target Start/End: Complemental strand, 23344379 - 23344173
Alignment:
Q  2 cataggagttaccaaaactccattgttacgnnnnnnngcttccataggtgcaaatttcacaaaccataagccattctaagccaatttcaagcacaaaatc 101  Q
    |||||||||| |||||||| ||||||||||       |||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||    
T  23344379 cataggagtttccaaaacttcattgttacgtttttt-gcttccataggtgcgaatttcacaaagcataagccattccaagccaatttcaagcacaaaatc 23344281  T
Q  102 aagtaagttttttgaatcctattgcgttgctattttgtgattgatttgatag-nnnnnnnnnngttaaattgcgattatagaggtttattgattttatga 200  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||| |||           |||||||||||||||||||||||||||||||||||||    
T  23344280 aagtaagttttttgaattctattgcattgctattttgtgattgatttgttagtttttttttttgttaaattgcgattatagaggtttattgattttatga 23344181  T
Q  201 tgttatga 208  Q
    ||||||||    
T  23344180 tgttatga 23344173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 271 - 388
Target Start/End: Complemental strand, 37779706 - 37779589
Alignment:
Q  271 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgata 370  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  37779706 tgaaattatggtagaattttgaggattagatgaattgttgtataatcgttgcgattaatttaggtttgttatgaaattttgttgttatgaatttgtgata 37779607  T
Q  371 gaattgttacgattagtt 388  Q
     |||| ||| ||||||||    
T  37779606 taatttttaggattagtt 37779589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 2 - 208
Target Start/End: Original strand, 40531798 - 40532001
Alignment:
Q  2 cataggagttaccaaaactccattgttacgnnnnnnngcttccataggtgcaaatttcacaaaccataagccattctaagccaatttcaagcacaaaatc 101  Q
    |||||||||| ||||||||| |||||||||       |||||||||||||| ||||||||||| |||| | ||||||| ||||| |||||||| ||||||    
T  40531798 cataggagtttccaaaactctattgttacgtgtttt-gcttccataggtgcgaatttcacaaagcatacgtcattctacgccaaattcaagcataaaatc 40531896  T
Q  102 aagtaagttttttgaatcctattgcgttgctattttgtgattgatttgatagnnnnnnnnnngttaaattgcgattatagaggtttattgattttatgat 201  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||| |||          ||||||||||||||||||||||||||||||||||||||    
T  40531897 aagtaagttttttgaatcatattgcattgctattttgtgattgatttgttag--ttttttttgttaaattgcgattatagaggtttattgattttatgat 40531994  T
Q  202 gttatga 208  Q
    |||||||    
T  40531995 gttatga 40532001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 33285789 - 33285936
Alignment:
Q  1 gcataggagttaccaaaactccattgttacgnnnnnnngcttccataggtgcaaatttcacaaaccataagccattctaagccaatttcaagcacaaaat 100  Q
    ||||||||||| |||||||||||||||||||       |||||||||||||| ||||||||||  |||||||||||| ||||||||||||||||||||||    
T  33285789 gcataggagtttccaaaactccattgttacgtttttt-gcttccataggtgcgaatttcacaatgcataagccattccaagccaatttcaagcacaaaat 33285887  T
Q  101 caagtaagttttttgaatcctattgcgttgctattttgtgattgatttg 149  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||||    
T  33285888 caagtaagttttttgaatcctattgcattgctattttttgattgatttg 33285936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 70 - 208
Target Start/End: Original strand, 49260094 - 49260232
Alignment:
Q  70 agccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtgattgatttgatagnnnnnnnnnngttaaa 169  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| |||          ||||||    
T  49260094 agccattccaagccaatttcaagcacaaaatcaagtaagttttttgaatcatattgcattgctattttgtgattgatttgttagttttttttgggttaaa 49260193  T
Q  170 ttgcgattatagaggtttattgattttatgatgttatga 208  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  49260194 ttgcgattatataggtttattgattttatgatgttatga 49260232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 47 - 206
Target Start/End: Complemental strand, 14440964 - 14440805
Alignment:
Q  47 aggtgcaaatttcacaaaccataagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtgattgat 146  Q
    |||||| |||||||||| | ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  14440964 aggtgcgaatttcacaagc-ataagccattccaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcattgttattttgtgattgat 14440866  T
Q  147 ttgatag-nnnnnnnnnngttaaattgcgattatagaggtttattgattttatgatgttat 206  Q
    ||| |||           |||||||||||||||||||| ||||||||||||||||||||||    
T  14440865 ttgttagtttttttttttgttaaattgcgattatagagatttattgattttatgatgttat 14440805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 271 - 363
Target Start/End: Original strand, 40532072 - 40532164
Alignment:
Q  271 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatt 363  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  40532072 tgaaattatggtagaatttttaagattagatgaattgttgtataatcggtgcgattagtttaggtctgttatgaaattttgttgttatgaatt 40532164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 453 - 568
Target Start/End: Original strand, 12790077 - 12790192
Alignment:
Q  453 gtaggttttgatcgtctatttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaataagaagaaggagggtgacgacaagaagaaagaaa 552  Q
    ||||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||| || || ||||||||| ||||||||||||||||||    
T  12790077 gtaggttttgatcatcaatttttttatgtagatatgtctcagaatcagggaaacgttgagttgaacaacaaaaaggagggtaacgacaagaagaaagaaa 12790176  T
Q  553 aatcgccgatgacatg 568  Q
    | | | ||||||||||    
T  12790177 atttgtcgatgacatg 12790192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 394 - 497
Target Start/End: Complemental strand, 17373746 - 17373643
Alignment:
Q  394 ataatttttaggattagtataggttttgataaattattgtagaattgttacgacatgatgtaggttttgatcgtctatttgtttatgtagatatgtctca 493  Q
    |||||||||||||||||| ||||||||||  |||||||||| ||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||    
T  17373746 ataatttttaggattagtttaggttttgacgaattattgtaaaattgttacgacatgatgtaggttttgatcgccaatttgtttatatagatatgtctca 17373647  T
Q  494 gaat 497  Q
    ||||    
T  17373646 gaat 17373643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 453 - 568
Target Start/End: Original strand, 40532181 - 40532296
Alignment:
Q  453 gtaggttttgatcgtctatttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaataagaagaaggagggtgacgacaagaagaaagaaa 552  Q
    |||||||||||||| | ||||| ||||||| |||||||||||||||||||||||||||||||||| || |  ||||| |||||||| |||||||||||||    
T  40532181 gtaggttttgatcgccaatttgcttatgtatatatgtctcagaatcagggaaacgttgagttgaacaacagaaaggatggtgacgataagaagaaagaaa 40532280  T
Q  553 aatcgccgatgacatg 568  Q
    ||||||||||||||||    
T  40532281 aatcgccgatgacatg 40532296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 271 - 353
Target Start/End: Original strand, 12789971 - 12790053
Alignment:
Q  271 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgtt 353  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  12789971 tgaaattatggtagaatttttacgattagatgaattgttgtataatcgttgcgattagtttaggattgttatgaaattttgtt 12790053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 89 - 204
Target Start/End: Original strand, 15355217 - 15355332
Alignment:
Q  89 caagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtgattgatttgatagnnnnnnnnnngttaaattgcgattatagaggttta 188  Q
    ||||||||||||||| ||| |||||||||||||||||| |||||||||||||||||||||| |||          |||||||||||||||||||||||||    
T  15355217 caagcacaaaatcaaataaattttttgaatcctattgcattgctattttgtgattgatttgttagtttttttttggttaaattgcgattatagaggttta 15355316  T
Q  189 ttgattttatgatgtt 204  Q
    ||||||||||||||||    
T  15355317 ttgattttatgatgtt 15355332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 3 - 105
Target Start/End: Original strand, 12789809 - 12789910
Alignment:
Q  3 ataggagttaccaaaactccattgttacgnnnnnnngcttccataggtgcaaatttcacaaaccataagccattctaagccaatttcaagcacaaaatca 102  Q
    ||||||||| |||||||||||||||||||       |||| ||||||||| ||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  12789809 ataggagtttccaaaactccattgttacgtttttt-gctttcataggtgcgaatttcacaaagcataagccattccaagccaatttcaagcacaaaatca 12789907  T
Q  103 agt 105  Q
    |||    
T  12789908 agt 12789910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 93 - 208
Target Start/End: Complemental strand, 37779884 - 37779769
Alignment:
Q  93 cacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtgattgatttgatagnnnnnnnnnngttaaattgcgattatagaggtttattga 192  Q
    |||||||||||||||||| ||   |||||||| | |||||||||||||||||||||| |||          ||| |||||||||||||||||||||||||    
T  37779884 cacaaaatcaagtaagttgttaccatcctattacattgctattttgtgattgatttgttagttttttttttgttgaattgcgattatagaggtttattga 37779785  T
Q  193 ttttatgatgttatga 208  Q
    ||||||||| ||||||    
T  37779784 ttttatgatattatga 37779769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 19162057 - 19162114
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    ||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  19162057 aagccattccaagccaatttcaatcacaaaaacaagtaagttttttgaatcctattgc 19162114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 44336415 - 44336472
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    ||||||||| ||||||||||||| ||||||| |||||||||||||| |||||||||||    
T  44336415 aagccattccaagccaatttcaatcacaaaaacaagtaagtttttttaatcctattgc 44336472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 72 - 140
Target Start/End: Original strand, 14172256 - 14172324
Alignment:
Q  72 ccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtg 140  Q
    |||||| ||||||||||||| ||||||| || ||||||||||||||||||||||| ||| | |||||||    
T  14172256 ccattccaagccaatttcaatcacaaaaacaggtaagttttttgaatcctattgcattgttgttttgtg 14172324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 79 - 126
Target Start/End: Original strand, 13634041 - 13634088
Alignment:
Q  79 aagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  13634041 aagccaatttcaatcacaaaaacaagtaagttttttgaatcctattgc 13634088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 73 - 140
Target Start/End: Complemental strand, 18975034 - 18974967
Alignment:
Q  73 cattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtg 140  Q
    ||||| ||||||||||| | ||||||| |||||||||||||||||||||||||| ||| | |||||||    
T  18975034 cattccaagccaatttcgatcacaaaaacaagtaagttttttgaatcctattgcattgttgttttgtg 18974967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 93 - 205
Target Start/End: Original strand, 39063400 - 39063513
Alignment:
Q  93 cacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtgattgatttgatagnnnnnnnnnngttaaattgcgattatagagg-tttattg 191  Q
    |||||||||||||||||| ||  ||||||||| | |||||||||||||||||||||| ||           |||||||| |||||||||||| |||||||    
T  39063400 cacaaaatcaagtaagttgttataatcctattacattgctattttgtgattgatttgttaatttttttttggttaaattacgattatagaggttttattg 39063499  T
Q  192 attttatgatgtta 205  Q
    || |||||||||||    
T  39063500 atcttatgatgtta 39063513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 73 - 140
Target Start/End: Complemental strand, 41803937 - 41803870
Alignment:
Q  73 cattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtg 140  Q
    ||||| ||||||||||||| |||||||  ||||||||||||||||||||||||| ||| | |||||||    
T  41803937 cattccaagccaatttcaatcacaaaaataagtaagttttttgaatcctattgcattgttgttttgtg 41803870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 73 - 140
Target Start/End: Original strand, 49925026 - 49925093
Alignment:
Q  73 cattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtg 140  Q
    ||||| ||||||||||||| ||||||| |||||||| ||||||||||||||||| ||| | |||||||    
T  49925026 cattccaagccaatttcaatcacaaaaacaagtaagatttttgaatcctattgcattgttgttttgtg 49925093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 73 - 140
Target Start/End: Complemental strand, 51271494 - 51271427
Alignment:
Q  73 cattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtg 140  Q
    ||||| ||||||||||||| ||||||| |||||||||||| ||||||||||||| ||| | |||||||    
T  51271494 cattccaagccaatttcaatcacaaaaacaagtaagttttatgaatcctattgcattgttgttttgtg 51271427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 140
Target Start/End: Original strand, 46141937 - 46142003
Alignment:
Q  74 attctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtg 140  Q
    |||| ||||||||||||| ||||||| ||||| |||||||||||||||||||| ||| | |||||||    
T  46141937 attccaagccaatttcaatcacaaaaacaagtgagttttttgaatcctattgcattgttgttttgtg 46142003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 68 - 149
Target Start/End: Original strand, 14771288 - 14771369
Alignment:
Q  68 taagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtgattgatttg 149  Q
    |||| ||||| ||||||||||||||||||||||||||||||||  |   |||||||| | || || ||||||||||||||||    
T  14771288 taagtcattccaagccaatttcaagcacaaaatcaagtaagttgatatcatcctattacatttctgttttgtgattgatttg 14771369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 73 - 126
Target Start/End: Original strand, 29760673 - 29760726
Alignment:
Q  73 cattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    ||||||||||||||||||| |||||||  ||||||||||||| |||||||||||    
T  29760673 cattctaagccaatttcaatcacaaaaagaagtaagtttttttaatcctattgc 29760726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 164 - 201
Target Start/End: Complemental strand, 35186697 - 35186660
Alignment:
Q  164 gttaaattgcgattatagaggtttattgattttatgat 201  Q
    ||||||||||||||||||||||||||||||||||||||    
T  35186697 gttaaattgcgattatagaggtttattgattttatgat 35186660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 164 - 201
Target Start/End: Original strand, 35585432 - 35585469
Alignment:
Q  164 gttaaattgcgattatagaggtttattgattttatgat 201  Q
    ||||||||||||||||||||||||||||||||||||||    
T  35585432 gttaaattgcgattatagaggtttattgattttatgat 35585469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 73 - 142
Target Start/End: Complemental strand, 49398374 - 49398305
Alignment:
Q  73 cattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtgat 142  Q
    ||||| || |||||||||| ||||||| ||||||||||||||||||| |||||| ||| | |||||||||    
T  49398374 cattccaaaccaatttcaatcacaaaaacaagtaagttttttgaatcttattgcattgttgttttgtgat 49398305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 208
Target Start/End: Original strand, 24268878 - 24268922
Alignment:
Q  164 gttaaattgcgattatagaggtttattgattttatgatgttatga 208  Q
    |||||||||||||||||| | ||||||||||||||||||||||||    
T  24268878 gttaaattgcgattatagggatttattgattttatgatgttatga 24268922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 69 - 140
Target Start/End: Complemental strand, 6437447 - 6437376
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtg 140  Q
    ||||||||  ||| ||||||||| ||||||| ||||||| |||||||||||||||||| ||| | |||||||    
T  6437447 aagccattacaagtcaatttcaatcacaaaaacaagtaaattttttgaatcctattgcattgttgttttgtg 6437376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 70 - 145
Target Start/End: Complemental strand, 17373893 - 17373818
Alignment:
Q  70 agccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtgattga 145  Q
    ||||||||  || |||||||||||| |||||||||||||| |||||||||||||| | ||| | |||||| |||||    
T  17373893 agccattccgagtcaatttcaagcaaaaaatcaagtaagtgttttgaatcctattacattgattttttgttattga 17373818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 73 - 140
Target Start/End: Original strand, 26633697 - 26633764
Alignment:
Q  73 cattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtg 140  Q
    ||||| ||||||||||||| ||||||| ||| |||||||||| ||||||||||| ||| | |||||||    
T  26633697 cattccaagccaatttcaatcacaaaaacaactaagtttttttaatcctattgcattgttgttttgtg 26633764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 69 - 148
Target Start/End: Original strand, 27485199 - 27485277
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtgattgattt 148  Q
    ||||||||| ||||||||||||| ||||||| ||||||| |||||| ||||||||||| ||| | ||||| | |||||||    
T  27485199 aagccattccaagccaatttcaatcacaaaaacaagtaa-tttttttaatcctattgcattgttgttttgcggttgattt 27485277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 69 - 140
Target Start/End: Complemental strand, 36911603 - 36911532
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtg 140  Q
    ||||||||  ||||||||||||| ||||||| || |||||||||||||||| |||||| ||| | |||||||    
T  36911603 aagccatttcaagccaatttcaatcacaaaaacaggtaagttttttgaatcttattgcattgttgttttgtg 36911532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 73 - 140
Target Start/End: Original strand, 42570292 - 42570359
Alignment:
Q  73 cattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtg 140  Q
    ||||| ||| ||||||||| ||||||| ||||||||||||||||||| |||||| ||| | |||||||    
T  42570292 cattcaaagtcaatttcaatcacaaaaacaagtaagttttttgaatcttattgcattgttgttttgtg 42570359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 73 - 116
Target Start/End: Complemental strand, 49429065 - 49429022
Alignment:
Q  73 cattctaagccaatttcaagcacaaaatcaagtaagttttttga 116  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||    
T  49429065 cattctaagccaatttcaatcacaaaaacaagtaagttttttga 49429022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 126
Target Start/End: Complemental strand, 13148949 - 13148904
Alignment:
Q  81 gccaatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    ||||||||||| ||||||| |||||||||||||| |||||||||||    
T  13148949 gccaatttcaatcacaaaaacaagtaagtttttttaatcctattgc 13148904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 126
Target Start/End: Original strand, 19261022 - 19261107
Alignment:
Q  41 ttccataggtgcaaatttcacaaaccataagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    |||||||||||| | | |||| || | |||||||||| ||||||||| ||| || ||||||||||||||   ||||||||||||||    
T  19261022 ttccataggtgcgattctcaccaagcttaagccattccaagccaattacaaacataaaatcaagtaagtgcattgaatcctattgc 19261107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 140
Target Start/End: Original strand, 35524904 - 35524965
Alignment:
Q  79 aagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtg 140  Q
    |||||||||| || |||||||  || |||||||||||||||||||||| ||||| |||||||    
T  35524904 aagccaatttaaatcacaaaaataattaagttttttgaatcctattgcattgctgttttgtg 35524965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 126
Target Start/End: Complemental strand, 44598809 - 44598756
Alignment:
Q  73 cattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    ||||| |||||||||||||  |||||| |||||||||||||| |||||||||||    
T  44598809 cattccaagccaatttcaataacaaaaacaagtaagtttttttaatcctattgc 44598756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 93 - 149
Target Start/End: Original strand, 24268801 - 24268857
Alignment:
Q  93 cacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtgattgatttg 149  Q
    |||||||||||||||||| ||   |||||||| | ||||||||||||||||||||||    
T  24268801 cacaaaatcaagtaagttgttaccatcctattacattgctattttgtgattgatttg 24268857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 126
Target Start/End: Complemental strand, 13285240 - 13285197
Alignment:
Q  83 caatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    ||||||||| ||||||||||||||||| |||||||| |||||||    
T  13285240 caatttcaatcacaaaatcaagtaagtgttttgaattctattgc 13285197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 454 - 500
Target Start/End: Original strand, 24362878 - 24362925
Alignment:
Q  454 taggttttgatcgtc-tatttgtttatgtagatatgtctcagaatcag 500  Q
    ||||||||||||||| | ||| ||||||||||||||||||||||||||    
T  24362878 taggttttgatcgtcatttttttttatgtagatatgtctcagaatcag 24362925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 529 - 568
Target Start/End: Original strand, 24362942 - 24362981
Alignment:
Q  529 agggtgacgacaagaagaaagaaaaatcgccgatgacatg 568  Q
    ||||||| ||||||||||||||||||||||| ||||||||    
T  24362942 agggtgatgacaagaagaaagaaaaatcgcctatgacatg 24362981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 454 - 499
Target Start/End: Original strand, 16531004 - 16531049
Alignment:
Q  454 taggttttgatcgtctatttgtttatgtagatatgtctcagaatca 499  Q
    |||| ||||||| || |||| |||||||||||||||||||||||||    
T  16531004 taggatttgatcatcaatttctttatgtagatatgtctcagaatca 16531049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 93 - 149
Target Start/End: Original strand, 16530741 - 16530797
Alignment:
Q  93 cacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtgattgatttg 149  Q
    |||||||||| ||||||| ||   |||||||| | ||||||||||||||||||||||    
T  16530741 cacaaaatcatgtaagttgttaccatcctattacattgctattttgtgattgatttg 16530797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 93 - 149
Target Start/End: Original strand, 17684744 - 17684800
Alignment:
Q  93 cacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtgattgatttg 149  Q
    |||||||||||||||||| ||   |||||||| | |||||||||| |||||||||||    
T  17684744 cacaaaatcaagtaagttgttaccatcctattacattgctattttctgattgatttg 17684800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 454 - 509
Target Start/End: Original strand, 49925267 - 49925323
Alignment:
Q  454 taggttttgatcgtctatttgttta-tgtagatatgtctcagaatcagggaaacgtt 509  Q
    ||||||||||||| |  ||| |||| |||||||||||||||||||||||| ||||||    
T  49925267 taggttttgatcgccattttttttaatgtagatatgtctcagaatcagggtaacgtt 49925323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 254; Significance: 1e-141; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 271 - 568
Target Start/End: Complemental strand, 22292434 - 22292137
Alignment:
Q  271 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgata 370  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  22292434 tgaaattatggtagaattttttggattagatgaattgttgtataatcgttgcgattagtttaggtttgctatgaaattttgttgttatgaatttgtgata 22292335  T
Q  371 gaattgttacgattagttacgttataatttttaggattagtataggttttgataaattattgtagaattgttacgacatgatgtaggttttgatcgtcta 470  Q
    ||||||||||||||||||||| |||||||||||||||||   ||||||||||| |||||||||||||||||||||||||||||||||||||||||| | |    
T  22292334 gaattgttacgattagttacggtataatttttaggattaacttaggttttgatgaattattgtagaattgttacgacatgatgtaggttttgatcgccga 22292235  T
Q  471 tttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaataagaagaaggagggtgacgacaagaagaaagaaaaatcgccgatgacatg 568  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22292234 tttgtttatgtagatatgtctcagaatcagggaaacgtttagttgaacaagaagaaggagggtgacgacaagaagaaagaaaaatcgccgatgacatg 22292137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 271 - 568
Target Start/End: Original strand, 43350013 - 43350310
Alignment:
Q  271 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgata 370  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  43350013 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagcttaggtttgttatgaaattttgttgttatgaatttgtgata 43350112  T
Q  371 gaattgttacgattagttacgttataatttttaggattagtataggttttgataaattattgtagaattgttacgacatgatgtaggttttgatcgtcta 470  Q
    ||||||||||||||||||||| |||||||||| |||||||| ||  ||||||| |||||||||| || |||||||||||||||||||||||||||| | |    
T  43350113 gaattgttacgattagttacggtataatttttcggattagtttactttttgatgaattattgtaaaaatgttacgacatgatgtaggttttgatcgccga 43350212  T
Q  471 tttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaataagaagaaggagggtgacgacaagaagaaagaaaaatcgccgatgacatg 568  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  43350213 tttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaacaagaagaaggagggtgacgacaagaagaaagaaatatcgccgatgacatg 43350310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 302 - 568
Target Start/End: Complemental strand, 17184756 - 17184490
Alignment:
Q  302 gaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgatagaattgttacgattagttacgttataatttt 401  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  17184756 gaattgttgtataatcgttgcaattagtttaggtttgttatgaaattttgttgttatgaatttgtgatagaattgttacgatttgttacggtataatttt 17184657  T
Q  402 taggattagtataggttttgataaattattgtagaattgttacgacatgatgtaggttttgatcgtctatttgtttatgtagatatgtctcagaatcagg 501  Q
    ||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||||    
T  17184656 tagaattagtttaggttttgatgaattattgtagaattgttacgacatgatgtaggttttgatcgccgatttgtttatgtagatatgtctcaaaatcagg 17184557  T
Q  502 gaaacgttgagttgaataagaagaaggagggtgacgacaagaagaaagaaaaatcgccgatgacatg 568  Q
    |||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||    
T  17184556 gaaacgttgagttgaacaagaagaaggagggtgaaaacaagaagaaagaaaaatcgccgatgacatg 17184490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 271 - 568
Target Start/End: Complemental strand, 42736575 - 42736281
Alignment:
Q  271 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgata 370  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||    
T  42736575 tgaaattatggtagaatttttaggattagataaattgttgtataatcgttgcgattagtttaggtttgttatgaaattt-gttgtt--gaatttgtgata 42736479  T
Q  371 gaattgttacgattagttacgttataatttttaggattagtataggttttgataaattattgtagaattgttacgacatgatgtaggttttgatcgtcta 470  Q
    ||||||||||||| ||||||| ||||||||||||||||||| |||||| |||| |||||||||||||||||||||||||||||||||||||||||| | |    
T  42736478 gaattgttacgatgagttacggtataatttttaggattagtttaggttatgatgaattattgtagaattgttacgacatgatgtaggttttgatcgccaa 42736379  T
Q  471 tttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaataagaagaaggagggtgacgacaagaagaaagaaaaatcgccgatgacatg 568  Q
     |||||||||||||||||||||||||||||  ||| |||| | |||| |||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  42736378 gttgtttatgtagatatgtctcagaatcagcaaaatgttggggtgaacaagaagaaggagggtgaccacaagaagaaagaaaaatcgtcgatgacatg 42736281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 167; E-Value: 4e-89
Query Start/End: Original strand, 272 - 559
Target Start/End: Original strand, 15900053 - 15900326
Alignment:
Q  272 gaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgatag 371  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||   |||||||||||||||||||||||||||||||| ||||    
T  15900053 gaaattatggtagaatttttaggattagatgaattgttgtataatcgttacgattagttt---tttgttatgaaattttgttgttatgaatttgtcatag 15900149  T
Q  372 aattgttacgattagttacgttataatttttaggattagtataggttttgataaattattgtagaattgttacgacatgatgtaggttttgatcgtctat 471  Q
    ||||||||||||| |||| | |||||||||||||||| || ||||||||||| |||||||||| |||||||||        |||||||||||||| | ||    
T  15900150 aattgttacgattggttatggtataatttttaggattggtttaggttttgatgaattattgtataattgttac--------gtaggttttgatcgccaat 15900241  T
Q  472 ttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaataagaagaaggagggtgacgacaagaagaaagaaaaatcgcc 559  Q
    |||||||||||||||||||||||||||||||||||||| |||||   || || ||||||||||| | |||||||||||||||||||||    
T  15900242 ttgtttatgtagatatgtctcagaatcagggaaacgttaagttg---aacaacaaggagggtgatgccaagaagaaagaaaaatcgcc 15900326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 271 - 568
Target Start/End: Original strand, 20876690 - 20876963
Alignment:
Q  271 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgata 370  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||                      
T  20876690 tgaaattatagtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggattgttatgaaattttgt------------------ 20876771  T
Q  371 gaattgttacgattagttacgttataatttttaggattagtataggtttt-gataaattattgtagaattgttacgacatgatgtaggttttgatcgtct 469  Q
        ||||| ||||||||| | ||||||||||||||||||| |||||||| ||| ||||||||||||||||||||| ||||||||| |||||||||  |     
T  20876772 ----tgttatgattagttatggtataatttttaggattagtttaggtttttgatgaattattgtagaattgttacggcatgatgtaagttttgatcaccg 20876867  T
Q  470 atttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaataagaagaaggagggtgacgacaagaagaaagaaaaatcgccgatgacatg 568  Q
    ||||||||||||||||||||||||||||||||||||||||||||||   || || |||||||| ||||||||||||||||||||||||| |||||||||    
T  20876868 atttgtttatgtagatatgtctcagaatcagggaaacgttgagttg---aacaaaaaggagggcgacgacaagaagaaagaaaaatcgctgatgacatg 20876963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 2 - 208
Target Start/End: Complemental strand, 22292710 - 22292505
Alignment:
Q  2 cataggagttaccaaaactccattgttacgnnnnnnngcttccataggtgcaaatttcacaaaccataagccattctaagccaatttcaagcacaaaatc 101  Q
    |||||||||| |||||| ||||||||||||       |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||    
T  22292710 cataggagtttccaaaaatccattgttacgtttttt-gcttccataggtgcgaatttcacaaaccataagccattccaagccaatttcaagcacaaaatc 22292612  T
Q  102 aagtaagttttttgaatcctattgcgttgctattttgtgattgatttgatagnnnnnnnnnngttaaattgcgattatagaggtttattgattttatgat 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||| |||||||||| |||||||||||||||||    
T  22292611 aagtaagttttttgaatcctattgcgttgctattttgtgattgatttgatagttttttttttgttaaattgtgattatagagttttattgattttatgat 22292512  T
Q  202 gttatga 208  Q
    |||||||    
T  22292511 gttatga 22292505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 3 - 208
Target Start/End: Original strand, 20876415 - 20876619
Alignment:
Q  3 ataggagttaccaaaactccattgttacgnnnnnnngcttccataggtgcaaatttcacaaaccataagccattctaagccaatttcaagcacaaaatca 102  Q
    ||||||||| |||||||||||||||||||       |||||||||||||| ||||||||||| |||||||||||| ||||||||| ||||||||||||||    
T  20876415 ataggagtttccaaaactccattgttacgtttttt-gcttccataggtgcgaatttcacaaagcataagccattccaagccaattccaagcacaaaatca 20876513  T
Q  103 agtaagttttttgaatcctattgcgttgctattttgtgattgatttgatagnnnnnnnnnngttaaattgcgattatagaggtttattgattttatgatg 202  Q
    |||||||||||||||||||||||| ||| |||||| ||||||||||| |||          |||||||||||||||||||||||||||||||||||||||    
T  20876514 agtaagttttttgaatcctattgcattgttattttttgattgatttgttagtttttttttggttaaattgcgattatagaggtttattgattttatgatg 20876613  T
Q  203 ttatga 208  Q
    ||||||    
T  20876614 ttatga 20876619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 2 - 208
Target Start/End: Original strand, 43349739 - 43349942
Alignment:
Q  2 cataggagttaccaaaactccattgttacgnnnnnnngcttccataggtgcaaatttcacaaaccataagccattctaagccaatttcaagcacaaaatc 101  Q
    |||||||||| |||||||||||||||||||       | |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||    
T  43349739 cataggagtttccaaaactccattgttacgttttttgg-ttccataggtgcgaatttcacaaaccataagccattcgaagccaatttcaagcacaaaatc 43349837  T
Q  102 aagtaagttttttgaatcctattgcgttgctattttgtgattgatttgatagnnnnnnnnnngttaaattgcgattatagaggtttattgattttatgat 201  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||||||          |||| |||| ||||||||||||||||||||||||||||    
T  43349838 aagtaagttttttgaatcctattgcgttgcta-tttatgattgatttgatag-ttttttttggttatattgtgattatagaggtttattgattttatgat 43349935  T
Q  202 gttatga 208  Q
    |||||||    
T  43349936 gttatga 43349942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 17185044 - 17184840
Alignment:
Q  1 gcataggagttaccaaaactccattgttacgnnnnnnngcttccataggtgcaaatttcacaaaccataagccattctaagccaatttcaagcacaaaat 100  Q
    ||||||||||| ||||||||||||||||||        |||||||||||||| |||||||||||| ||||||||||| ||||||||||||| ||||||||    
T  17185044 gcataggagtttccaaaactccattgttac-attttttgcttccataggtgcgaatttcacaaactataagccattccaagccaatttcaatcacaaaat 17184946  T
Q  101 caagtaagttttttgaatcctattgcgttgctattttgtgattgatttgatagnnnnnnnnnngttaaattgcgattatagaggtttattgattttatga 200  Q
    ||| ||||||||| |||||| | || |||||||||||||||||||||||||||          |||||||||||||||||||||||| ||||||||||||    
T  17184945 caattaagtttttcgaatccaactgtgttgctattttgtgattgatttgatag--ttttttttgttaaattgcgattatagaggtttgttgattttatga 17184848  T
Q  201 tgttatga 208  Q
    ||||||||    
T  17184847 tgttatga 17184840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 70 - 208
Target Start/End: Complemental strand, 42736775 - 42736638
Alignment:
Q  70 agccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtgattgatttgatagnnnnnnnnnngttaaa 169  Q
    |||||||| |||||||||||||||||||||||||||||||||||| |||| |||||| ||| ||| |||||||||||||| |||          ||||||    
T  42736775 agccattccaagccaatttcaagcacaaaatcaagtaagtttttttaatcttattgcattgttatattgtgattgatttgttag-ttttttttggttaaa 42736677  T
Q  170 ttgcgattatagaggtttattgattttatgatgttatga 208  Q
    ||||||||| | |||||||||||||||||||||||||||    
T  42736676 ttgcgattagataggtttattgattttatgatgttatga 42736638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 289 - 388
Target Start/End: Original strand, 3379762 - 3379861
Alignment:
Q  289 tttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgatagaattgttacgattagtt 388  Q
    |||||| || |||||||||||||| ||| |||  ||||||||||||||| ||||||| | ||||||||||||||||||||| |||| |||| ||||||||    
T  3379762 tttaggttttgatgaattgttgtagaattgttaggattagtttaggttttttatgaactgttgttgttatgaatttgtgattgaatggttaggattagtt 3379861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 46 - 145
Target Start/End: Complemental strand, 4231187 - 4231088
Alignment:
Q  46 taggtgcaaatttcacaaaccataagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtgattga 145  Q
    ||||||| | |||||| || |||||| ||||| |||||||||||||||||||||||||||||||| ||   |||||||||| ||||| ||||||||||||    
T  4231187 taggtgcgattttcaccaagcataagtcattccaagccaatttcaagcacaaaatcaagtaagttgttatcatcctattgcattgctgttttgtgattga 4231088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 271 - 324
Target Start/End: Original strand, 2205881 - 2205934
Alignment:
Q  271 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcga 324  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  2205881 tgaaattatggtagaatttttaggattagatgaattcttgtataatcgttgcga 2205934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 70 - 145
Target Start/End: Original strand, 1641042 - 1641117
Alignment:
Q  70 agccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtgattga 145  Q
    |||||||| ||||||||||||| ||||||||||||||||| ||||||||| |||||| ||| | ||||||||||||    
T  1641042 agccattccaagccaatttcaatcacaaaatcaagtaagtgttttgaatcatattgcattggttttttgtgattga 1641117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 74 - 140
Target Start/End: Original strand, 46860671 - 46860737
Alignment:
Q  74 attctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtg 140  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||| | |||||||    
T  46860671 attctaagccaatttcaatcacaaaaacaagtaagttttttgaatcctattgcattgttgttttgtg 46860737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 165 - 208
Target Start/End: Original strand, 2205767 - 2205810
Alignment:
Q  165 ttaaattgcgattatagaggtttattgattttatgatgttatga 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  2205767 ttaaattgcgattatagaggtttattgattttatgatgttatga 2205810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 73 - 126
Target Start/End: Complemental strand, 10524235 - 10524182
Alignment:
Q  73 cattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    ||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  10524235 cattccaagccaatttcaatcacaaaaacaagtaagttttttgaatcctattgc 10524182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 79 - 140
Target Start/End: Original strand, 21185800 - 21185861
Alignment:
Q  79 aagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtg 140  Q
    ||||||||||||| ||||||| ||| |||||||||||||||||||||| ||| |||||||||    
T  21185800 aagccaatttcaatcacaaaaacaaataagttttttgaatcctattgcattgttattttgtg 21185861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 126
Target Start/End: Complemental strand, 34142566 - 34142509
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    ||||||||| ||||||||||||| ||||||| |||||||||||| |||||||||||||    
T  34142566 aagccattccaagccaatttcaatcacaaaaacaagtaagttttctgaatcctattgc 34142509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 124
Target Start/End: Complemental strand, 48272361 - 48272308
Alignment:
Q  71 gccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctatt 124  Q
    ||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||    
T  48272361 gccattccaagccaatttcaatcacaaaaacaagtaagttttttgaatcctatt 48272308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 73 - 140
Target Start/End: Original strand, 28112952 - 28113019
Alignment:
Q  73 cattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtg 140  Q
    ||||| || |||||||||| ||||||| |||||||||||||||||||||||||| ||| | |||||||    
T  28112952 cattccaaaccaatttcaatcacaaaaacaagtaagttttttgaatcctattgcattgttgttttgtg 28113019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 73 - 140
Target Start/End: Original strand, 36392295 - 36392362
Alignment:
Q  73 cattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtg 140  Q
    ||||| ||||||||||||| ||||||| ||||||||||||| |||||||||||| ||| | |||||||    
T  36392295 cattccaagccaatttcaatcacaaaaacaagtaagtttttagaatcctattgcattgttgttttgtg 36392362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 79 - 126
Target Start/End: Complemental strand, 45257928 - 45257881
Alignment:
Q  79 aagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  45257928 aagccaatttcaatcacaaaaacaagtaagttttttgaatcctattgc 45257881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 454 - 568
Target Start/End: Original strand, 1641484 - 1641600
Alignment:
Q  454 taggttttgatcgtctatttgtttatgtagatatgtctca-----gaatcagggaaacgttgagttgaataagaagaaggagggtgacgacaagaagaaa 548  Q
    ||||||||||||| | |||| |||||||||||||||||||     ||||||||| |||| | ||||||| || |||   | |||||| || |||||||||    
T  1641484 taggttttgatcgccaatttttttatgtagatatgtctcatatcagaatcagggtaacgctcagttgaaaaaaaag---gtgggtgatgagaagaagaaa 1641580  T
Q  549 gaaaaatcgccgatgacatg 568  Q
    ||||||||||| ||||||||    
T  1641581 gaaaaatcgcctatgacatg 1641600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 73 - 126
Target Start/End: Complemental strand, 17840794 - 17840741
Alignment:
Q  73 cattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    ||||| || |||||||||| ||||||| ||||||||||||||||||||||||||    
T  17840794 cattccaatccaatttcaatcacaaaaacaagtaagttttttgaatcctattgc 17840741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 69 - 126
Target Start/End: Complemental strand, 20566241 - 20566184
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    ||||||||  |||||||||| || ||||||| ||||||||||||||||||||||||||    
T  20566241 aagccattagaagccaattttaatcacaaaaacaagtaagttttttgaatcctattgc 20566184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 69 - 126
Target Start/End: Complemental strand, 40590457 - 40590400
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    ||||||||| ||||||||||||| | ||||| |||||||||||||| |||||||||||    
T  40590457 aagccattccaagccaatttcaatcgcaaaaacaagtaagtttttttaatcctattgc 40590400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 71 - 140
Target Start/End: Original strand, 48314830 - 48314899
Alignment:
Q  71 gccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtg 140  Q
    ||||||| |||| |||||||| ||||||| ||||||||||||||||||| |||||| ||| | |||||||    
T  48314830 gccattccaagcaaatttcaatcacaaaaacaagtaagttttttgaatcatattgcattgttgttttgtg 48314899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 145
Target Start/End: Original strand, 33603370 - 33603442
Alignment:
Q  73 cattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtgattga 145  Q
    ||||| ||| ||||||||| ||||||| ||||||| ||||| |||||||||||| ||||| ||||||| ||||    
T  33603370 cattccaagtcaatttcaatcacaaaaacaagtaaatttttagaatcctattgcattgctgttttgtggttga 33603442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 396 - 443
Target Start/End: Original strand, 3379747 - 3379794
Alignment:
Q  396 aatttttaggattagtataggttttgataaattattgtagaattgtta 443  Q
    |||||||||||||||| ||||||||||| |||| ||||||||||||||    
T  3379747 aatttttaggattagtttaggttttgatgaattgttgtagaattgtta 3379794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 79 - 126
Target Start/End: Original strand, 15070530 - 15070577
Alignment:
Q  79 aagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    ||||||||||||| ||||||| |||||||||||||| |||||||||||    
T  15070530 aagccaatttcaatcacaaaaacaagtaagtttttttaatcctattgc 15070577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 73 - 140
Target Start/End: Complemental strand, 15309879 - 15309812
Alignment:
Q  73 cattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtg 140  Q
    ||||| ||||||||||||| ||||||| |||||||||||||| |||| |||||| ||| | |||||||    
T  15309879 cattccaagccaatttcaatcacaaaaacaagtaagtttttttaatcttattgcattgttgttttgtg 15309812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 83 - 126
Target Start/End: Complemental strand, 41623778 - 41623735
Alignment:
Q  83 caatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||    
T  41623778 caatttcaatcacaaaaacaagtaagttttttgaatcctattgc 41623735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 69 - 140
Target Start/End: Complemental strand, 48194539 - 48194468
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtg 140  Q
    |||| |||| |||| |||||||| ||||||| |||||||||||| ||||||||||||| ||| | |||||||    
T  48194539 aagctattccaagcgaatttcaatcacaaaaacaagtaagttttctgaatcctattgcattgttgttttgtg 48194468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 123
Target Start/End: Original strand, 9365844 - 9365898
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctat 123  Q
    ||||||||  |||||||||| || ||||||| |||||||||||||||||||||||    
T  9365844 aagccattagaagccaattttaatcacaaaaacaagtaagttttttgaatcctat 9365898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 140
Target Start/End: Complemental strand, 42684113 - 42684044
Alignment:
Q  71 gccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtg 140  Q
    ||||||| || |||||||||| |||||||  ||||||||||||| ||||||||||| ||| | |||||||    
T  42684113 gccattccaaaccaatttcaatcacaaaaataagtaagtttttttaatcctattgcattgttgttttgtg 42684044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 45361789 - 45361846
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    |||||||||||| |||||||||| || |||| |||||||||||||| ||| |||||||    
T  45361789 aagccattctaaaccaatttcaatcataaaaacaagtaagtttttttaattctattgc 45361846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 73 - 145
Target Start/End: Original strand, 28977727 - 28977799
Alignment:
Q  73 cattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtgattga 145  Q
    ||||| || |||||||||| |||| || |||||||||||||| ||||||||||| ||| | ||||||| ||||    
T  28977727 cattccaatccaatttcaatcacataaacaagtaagtttttttaatcctattgcattgttgttttgtggttga 28977799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 126
Target Start/End: Original strand, 42503996 - 42504039
Alignment:
Q  83 caatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    ||||||||| ||||||| |||||||||||||| |||||||||||    
T  42503996 caatttcaatcacaaaaacaagtaagtttttttaatcctattgc 42504039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 140
Target Start/End: Original strand, 46597051 - 46597120
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtg 140  Q
    ||||||||| ||||||||||||| ||||||| ||| |||||||||| ||||||||||| ||| | |||||||    
T  46597051 aagccattc-aagccaatttcaatcacaaaaacaactaagtttttt-aatcctattgcattgttgttttgtg 46597120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 254; Significance: 1e-141; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 271 - 568
Target Start/End: Complemental strand, 12398383 - 12398086
Alignment:
Q  271 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgata 370  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  12398383 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgtaatgaatttgtgata 12398284  T
Q  371 gaattgttacgattagttacgttataatttttaggattagtataggttttgataaattattgtagaattgttacgacatgatgtaggttttgatcgtcta 470  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||  | |    
T  12398283 gaattgttacgattagttacggtataatttttaggattagtttaggttttgatgaattattgtagaattgttacgatatgatgtaggttttgatcaccga 12398184  T
Q  471 tttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaataagaagaaggagggtgacgacaagaagaaagaaaaatcgccgatgacatg 568  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||    
T  12398183 tttttttatgtagatatgtctcagaatcagggaaacgttgagttgaataagaagaaggagggtgacgacaagaagaaagaaaaatcacggatgacatg 12398086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 322 - 568
Target Start/End: Original strand, 32133343 - 32133586
Alignment:
Q  322 cgattagtttaggtttgttatgaaattttgttgttatgaatttgtgatagaattgttacgattagttacgttataatttttaggattagtataggttttg 421  Q
    ||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||   ||||||||||||||||| | || ||||||    
T  32133343 cgattagtttaggtttgttatgaaattttgttcgtatgaatttgtgttagaattgttacgattagttattgtataatttttaggattaatttaagttttg 32133442  T
Q  422 ataaattattgtagaattgttacgacatgatgtaggttttgatcgtctatttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaataag 521  Q
    || ||||||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||   ||     
T  32133443 atgaattattgtagaattgttacgacataatgtaggttttgatcgccaatttgtttatgtagatatgtctcagaatcagggaaacattgagttg---aac 32133539  T
Q  522 aagaaggagggtgacgacaagaagaaagaaaaatcgccgatgacatg 568  Q
    || ||||||||||| | ||||||||||||||||||||| ||||||||    
T  32133540 aacaaggagggtgatgccaagaagaaagaaaaatcgcctatgacatg 32133586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 12398659 - 12398454
Alignment:
Q  1 gcataggagttaccaaaactccattgttacgnnnnnnngcttccataggtgcaaatttcacaaaccataagccattctaagccaatttcaagcacaaaat 100  Q
    |||||||||||  ||||||||||||||||||       |||||||||||||| || || |||||||||||||||||| ||||||||||||||||||||||    
T  12398659 gcataggagttttcaaaactccattgttacgtttatt-gcttccataggtgcgaaatttacaaaccataagccattcaaagccaatttcaagcacaaaat 12398561  T
Q  101 caagtaagttttttgaatcctattgcgttgctattttgtgattgatttgatagnnnnnnnnnngttaaattgcgattatagaggtttattgattttatga 200  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||          ||||||||| ||||||||| |||||||||||||||||    
T  12398560 caagtaagttttttgaatcctattgtgttgctattttgtgattgatttgatag-tttttttttgttaaattgtgattatagaagtttattgattttatga 12398462  T
Q  201 tgttatga 208  Q
    ||||||||    
T  12398461 tgttatga 12398454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 289 - 388
Target Start/End: Original strand, 20241075 - 20241174
Alignment:
Q  289 tttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgatagaattgttacgattagtt 388  Q
    |||||| || |||||||||||||| ||| |||  ||||||||||||||| ||||||| | |||||||||||||||||| |||||||||||| ||||||||    
T  20241075 tttaggttttgatgaattgttgtagaattgtttggattagtttaggttttttatgaattgttgttgttatgaatttgtaatagaattgttaggattagtt 20241174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 289 - 388
Target Start/End: Original strand, 22135059 - 22135158
Alignment:
Q  289 tttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgatagaattgttacgattagtt 388  Q
    |||||| || |||||||||||||| ||| |||  ||||||||||||||| ||||||| | |||||||||||||||||| |||||||||||| ||||||||    
T  22135059 tttaggttttgatgaattgttgtagaattgtttggattagtttaggttttttatgaattgttgttgttatgaatttgtaatagaattgttaggattagtt 22135158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 289 - 388
Target Start/End: Original strand, 22142412 - 22142511
Alignment:
Q  289 tttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgatagaattgttacgattagtt 388  Q
    |||||| || |||||||||||||| ||| |||  ||||||||||||||| ||||||| | |||||||||||||||||| |||||||||||| ||||||||    
T  22142412 tttaggttttgatgaattgttgtagaattgtttggattagtttaggttttttatgaattgttgttgttatgaatttgtaatagaattgttaggattagtt 22142511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 299 - 388
Target Start/End: Original strand, 17464266 - 17464355
Alignment:
Q  299 gatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgatagaattgttacgattagtt 388  Q
    |||||||||||||| ||| |||  ||||  || |||||| ||||||| | ||||||||||||||||||||||||||||||| ||||||||    
T  17464266 gatgaattgttgtagaattgttaggatttcttaaggttttttatgaattgttgttgttatgaatttgtgatagaattgttaagattagtt 17464355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 49 - 126
Target Start/End: Original strand, 30763462 - 30763539
Alignment:
Q  49 gtgcaaatttcacaaaccataagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    |||||| |||||| || | |||| ||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  30763462 gtgcaattttcaccaagcttaagtcattccaagccaattacaagcacaaaatcaagtaagtgttttgaatcctattgc 30763539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 93 - 208
Target Start/End: Original strand, 32133057 - 32133172
Alignment:
Q  93 cacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtgattgatttgatagnnnnnnnnnngttaaattgcgattatagaggtttattga 192  Q
    |||||||||||||||||| ||   |||||||| | |||||||||||||||||||||| |||          ||||||||||||||||||| | || ||||    
T  32133057 cacaaaatcaagtaagttgttatcatcctattacattgctattttgtgattgatttgttaggtttttttttgttaaattgcgattatagaagatttttga 32133156  T
Q  193 ttttatgatgttatga 208  Q
    ||||||||||||||||    
T  32133157 ttttatgatgttatga 32133172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 73 - 140
Target Start/End: Original strand, 35019746 - 35019813
Alignment:
Q  73 cattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtg 140  Q
    ||||| ||||||||||||| ||||||| |||||||||||||||||||||||||| ||| | |||||||    
T  35019746 cattccaagccaatttcaatcacaaaaacaagtaagttttttgaatcctattgcattgttgttttgtg 35019813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 13616406 - 13616463
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    ||||||||| ||||||||||||| ||||||| |||||||||||||| |||||||||||    
T  13616406 aagccattccaagccaatttcaatcacaaaaacaagtaagttttttaaatcctattgc 13616463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 69 - 125
Target Start/End: Original strand, 32026127 - 32026183
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattg 125  Q
    |||| |||| ||||||||||||| ||||||| |||||||||||||||||||||||||    
T  32026127 aagctattccaagccaatttcaatcacaaaaacaagtaagttttttgaatcctattg 32026183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 69 - 126
Target Start/End: Complemental strand, 27641626 - 27641569
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    ||||||||  |||||||||| || ||||||| ||||||||||||||||||||||||||    
T  27641626 aagccattagaagccaattttaatcacaaaaacaagtaagttttttgaatcctattgc 27641569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 73 - 140
Target Start/End: Complemental strand, 13404536 - 13404469
Alignment:
Q  73 cattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtg 140  Q
    ||||| || ||||||| || ||||||| |||||||||||||||||||||||||| ||| | |||||||    
T  13404536 cattccaatccaatttaaatcacaaaaacaagtaagttttttgaatcctattgcattgttgttttgtg 13404469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 123
Target Start/End: Complemental strand, 6206968 - 6206914
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctat 123  Q
    ||||||||  |||||||||| || ||||||| |||||||||||||||||||||||    
T  6206968 aagccattagaagccaattttaatcacaaaaacaagtaagttttttgaatcctat 6206914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 123
Target Start/End: Complemental strand, 11693935 - 11693881
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctat 123  Q
    ||||||||  |||||||||| || ||||||| |||||||||||||||||||||||    
T  11693935 aagccattagaagccaattttaatcacaaaaacaagtaagttttttgaatcctat 11693881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 32691360 - 32691406
Alignment:
Q  79 aagccaatttcaagcacaaaatcaagtaagttttttgaatcctattg 125  Q
    |||||||||| || ||||||| |||||||||||||||||||||||||    
T  32691360 aagccaattttaatcacaaaaacaagtaagttttttgaatcctattg 32691406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 34801669 - 34801727
Alignment:
Q  69 aagccattctaagccaatttcaagcaca-aaatcaagtaagttttttgaatcctattgc 126  Q
    ||||||||| ||||||||||||| |||| |||  |||||||||||||||||||||||||    
T  34801669 aagccattccaagccaatttcaatcacacaaaaaaagtaagttttttgaatcctattgc 34801727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 126
Target Start/End: Complemental strand, 29068173 - 29068116
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    ||||||||  ||||||||||||| ||||||| |||||||||||||| ||| |||||||    
T  29068173 aagccatttcaagccaatttcaatcacaaaaacaagtaagtttttttaattctattgc 29068116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 126
Target Start/End: Complemental strand, 29083420 - 29083363
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    ||||||||  ||||||||||||| ||||||| |||||||||||||| ||| |||||||    
T  29083420 aagccatttcaagccaatttcaatcacaaaaacaagtaagtttttttaattctattgc 29083363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 69 - 139
Target Start/End: Complemental strand, 14124626 - 14124556
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgt 139  Q
    ||||||||| ||||||||||||| ||||||| |||||| || || |||||| |||||| ||| | ||||||    
T  14124626 aagccattccaagccaatttcaatcacaaaaacaagtacgtgttctgaatcttattgcattgttgttttgt 14124556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 396 - 442
Target Start/End: Original strand, 20241060 - 20241106
Alignment:
Q  396 aatttttaggattagtataggttttgataaattattgtagaattgtt 442  Q
    |||||||||||||| | ||||||||||| |||| |||||||||||||    
T  20241060 aatttttaggattaatttaggttttgatgaattgttgtagaattgtt 20241106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 396 - 442
Target Start/End: Original strand, 22135044 - 22135090
Alignment:
Q  396 aatttttaggattagtataggttttgataaattattgtagaattgtt 442  Q
    |||||||||||||| | ||||||||||| |||| |||||||||||||    
T  22135044 aatttttaggattaatttaggttttgatgaattgttgtagaattgtt 22135090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 396 - 442
Target Start/End: Original strand, 22142397 - 22142443
Alignment:
Q  396 aatttttaggattagtataggttttgataaattattgtagaattgtt 442  Q
    |||||||||||||| | ||||||||||| |||| |||||||||||||    
T  22142397 aatttttaggattaatttaggttttgatgaattgttgtagaattgtt 22142443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 126
Target Start/End: Complemental strand, 29076227 - 29076174
Alignment:
Q  73 cattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    ||||| || |||||||||| ||||||| |||||||||||||| ||| |||||||    
T  29076227 cattccaaaccaatttcaatcacaaaaacaagtaagtttttttaattctattgc 29076174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 126
Target Start/End: Complemental strand, 29109760 - 29109707
Alignment:
Q  73 cattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    ||||| || |||||||||| ||||||| |||||||||||||| ||| |||||||    
T  29109760 cattccaaaccaatttcaatcacaaaaacaagtaagtttttttaattctattgc 29109707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 126
Target Start/End: Complemental strand, 29111200 - 29111147
Alignment:
Q  73 cattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    ||||| || |||||||||| ||||||| |||||||||||||| ||| |||||||    
T  29111200 cattccaaaccaatttcaatcacaaaaacaagtaagtttttttaattctattgc 29111147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 252; Significance: 1e-140; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 274 - 568
Target Start/End: Complemental strand, 47873621 - 47873324
Alignment:
Q  274 aattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgt---tgttatgaatttgtgata 370  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||    
T  47873621 aattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgtacttgttatgaatttgtgata 47873522  T
Q  371 gaattgttacgattagttacgttataatttttaggattagtataggttttgataaattattgtagaattgttacgacatgatgtaggttttgatcgtcta 470  Q
     |||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| | |    
T  47873521 taattgttacgattagttacggtataatttttaggattagtttaggttttgatgaattattgtagaattgttacgacatgatgtaggttttgatcgccga 47873422  T
Q  471 tttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaataagaagaaggagggtgacgacaagaagaaagaaaaatcgccgatgacatg 568  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  47873421 tttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaacaagaagaaggagggtgacgacaagaagaaagaaaaatcaccgatgacatg 47873324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 271 - 568
Target Start/End: Complemental strand, 22438219 - 22437921
Alignment:
Q  271 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgata 370  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22438219 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgata 22438120  T
Q  371 gaattgttacgattagttacgttataatttttaggattagtataggttttgataaattattgtagaattgttacgacatgatgtaggttttgatcgtcta 470  Q
    ||||||||||||||| ||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||||| | |    
T  22438119 gaattgttacgattaattacggtataatttttaggattagtttaggttttgatgaattattgtagaattgttccgacatgatgtaggttttgatcgccga 22438020  T
Q  471 -tttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaataagaagaaggagggtgacgacaagaagaaagaaaaatcgccgatgacatg 568  Q
     ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  22438019 ttttttttatgtagatatgtctcagaatcagggaaacgttgagttgaacaagaagaaggagggtgacggcaagaagaaagaaaaatcgtcgatgacatg 22437921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 271 - 568
Target Start/End: Original strand, 51026412 - 51026707
Alignment:
Q  271 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgata 370  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  51026412 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgtt--gaatttgtgata 51026509  T
Q  371 gaattgttacgattagttacgttataatttttaggattagtataggttttgataaattattgtagaattgttacgacatgatgtaggttttgatcgtcta 470  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||| |||| |||||||||||||||||||||||||||||||||||||||||| | |    
T  51026510 gaattgttacgattagttacggtataatttttaggattagtttaggttatgatgaattattgtagaattgttacgacatgatgtaggttttgatcgccga 51026609  T
Q  471 tttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaataagaagaaggagggtgacgacaagaagaaagaaaaatcgccgatgacatg 568  Q
     ||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  51026610 gttgtttatgtagatatgtctcagaatcagggaaacgttgaggtgaacaagaaaaaggagggtgacgacaagaagaaagaaaaatcaccgatgacatg 51026707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 271 - 564
Target Start/End: Complemental strand, 2774607 - 2774314
Alignment:
Q  271 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgata 370  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||    
T  2774607 tgaaattatggtagaatttttagaattagatgaattgttgtataatcgttgcaattagtttcggtttgttatgaaattttgtagttatgaatttgtgata 2774508  T
Q  371 gaattgttacgattagttacgttataatttttaggattagtataggttttgataaattattgtagaattgttacgacatgatgtaggttttgatcgtcta 470  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||| ||| |||||||||||||||||||||||||||| | | |    
T  2774507 gaattgttacgattagttacggtataatttttaggattagtttaggttttgatgaattattataggattgttacgacatgatgtaggttttgatagccga 2774408  T
Q  471 tttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaataagaagaaggagggtgacgacaagaagaaagaaaaatcgccgatga 564  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  2774407 tttgtttatttagatatgtctcagaatcagggaaacgttgagttgaacaagaagaaggagggtgacgacaagaagaaagaaaaatcgccgatga 2774314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 271 - 547
Target Start/End: Original strand, 36775084 - 36775359
Alignment:
Q  271 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgata 370  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36775084 tgaaattatggtagaatgtttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgata 36775183  T
Q  371 gaattgttacgattagttacgttataatttttaggattagtataggttttgataaattattgtagaattgttacgacatgatgtaggttttgatcgtcta 470  Q
    ||||||||||||||||||||| ||||||||||||||||||| || |||||||| ||||||||| ||||||||||||||||||||||||||||||||   |    
T  36775184 gaattgttacgattagttacggtataatttttaggattagtttaagttttgatgaattattgtggaattgttacgacatgatgtaggttttgatcgctga 36775283  T
Q  471 tttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaataagaagaaggagggtgacgacaagaagaa 547  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||||||||| ||||||||||    
T  36775284 tttgtttatgtagatatgtctcagaatcatggaaacgttgagttg-acaagaagaaggagggtgacaacaagaagaa 36775359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 271 - 568
Target Start/End: Complemental strand, 21171055 - 21170770
Alignment:
Q  271 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgata 370  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21171055 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgata 21170956  T
Q  371 gaattgttacgattagttacgttataatttttaggattagtataggttttgataaattattgtagaattgttacgacatgatgtaggttttgatcgtcta 470  Q
    ||||||||||||||||||||||||||         |||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||||||| | |    
T  21170955 gaattgttacgattagttacgttata---------attagtttaggttttgatgaattattgttgaattgttacgacatgatgtaggttttgatcgccga 21170865  T
Q  471 tttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaataagaagaaggagggtgacgacaagaagaaagaaaaatcgccgatgacatg 568  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| || ||||   ||||||| ||||||||||||||||||||||||||||||||    
T  21170864 tttgtttatgtagatatgtctcagaatcagggaaacgttgaggtgaacaaaaaga---agggtgatgacaagaagaaagaaaaatcgccgatgacatg 21170770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 154; E-Value: 3e-81
Query Start/End: Original strand, 271 - 568
Target Start/End: Complemental strand, 45941103 - 45940832
Alignment:
Q  271 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgata 370  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||                |||||||||    
T  45941103 tgaaattatggtataattttttggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaa----------------tttgtgata 45941020  T
Q  371 gaattgttacgattagttacgttataatttttaggattagtataggttttgataaattattgtagaattgttacgacatgatgtaggttttgatcgtcta 470  Q
    ||||||||||| |          |||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||||||||||||||| | |    
T  45941019 gaattgttacggt----------ataatttttaggattaatttaggttttgatgaattattgtagaattgttacgacatgatgtaggttttgatcgccga 45940930  T
Q  471 tttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaataagaagaaggagggtgacgacaagaagaaagaaaaatcgccgatgacatg 568  Q
     |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | | ||||||||    
T  45940929 attgtttatgtagatatgtctcagaatcaaggaaacgttgagttgaacaagaagaaggagggtgacgacaagaagaaagaaaaattgtcaatgacatg 45940832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 138; E-Value: 9e-72
Query Start/End: Original strand, 272 - 509
Target Start/End: Original strand, 14968914 - 14969154
Alignment:
Q  272 gaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgatag 371  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  14968914 gaaattatggtagaatttttaggattagatgaattgttgtataatcattacgattagtttaggttttttatgaaattttgttgttatgaatttgtgatag 14969013  T
Q  372 aattgttacgattagttacgttataatttttaggattagtataggttttgataaattattgtagaattgtt-acgacatg--atgtaggttttgatcgtc 468  Q
    ||||||||||||| |  | | |||||||||||||||| || ||||||||||| ||||||||  ||||| ||   ||  ||  |||||||||||||||| |    
T  14969014 aattgttacgattggccatggtataatttttaggattggtttaggttttgatgaattattgatgaattattgtagaattgttatgtaggttttgatcgcc 14969113  T
Q  469 tatttgtttatgtagatatgtctcagaatcagggaaacgtt 509  Q
     ||||||||||||||||||||||||||||| ||||||||||    
T  14969114 aatttgtttatgtagatatgtctcagaatcggggaaacgtt 14969154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 271 - 546
Target Start/End: Original strand, 2567693 - 2567942
Alignment:
Q  271 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgata 370  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||                ||||||    
T  2567693 tgaaattatggtagaattttcaggattagatgaattgttgtataatagttgcgattagtttatgtttgttatgaactt----------------gtgata 2567776  T
Q  371 gaattgttacgattagttacgttataatttttaggattagtataggttttgataaattattgtagaattgttacgacatgatgtaggttttgatcgtcta 470  Q
    |||||||||||||          ||||||| |||||||| | ||||||||||| || ||||||||||||||||||||||||||||||||||||||| | |    
T  2567777 gaattgttacgat----------ataatttctaggattaatttaggttttgatgaactattgtagaattgttacgacatgatgtaggttttgatcgccga 2567866  T
Q  471 tttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaataagaagaaggagggtgacgacaagaaga 546  Q
     |||| |||||| |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  2567867 gttgtgtatgtaaatatgtctcagaatcagggaaatgttgagttgaacaagaagaaggagggtgacgacaagaaga 2567942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 399 - 568
Target Start/End: Original strand, 43888243 - 43888409
Alignment:
Q  399 ttttaggattagtataggttttgataaattattgtagaattgttacgacatgatgtaggttttgatcgtctatttgtttatgtagatatgtctcagaatc 498  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||    
T  43888243 ttttaggattagtttaggttttgatgaattattgtagaattgttacgacatgatgtaggttttgatcatcgatctgtttatgtagatatgtctcagaatc 43888342  T
Q  499 agggaaacgttgagttgaataagaagaaggagggtgacgacaagaagaaagaaaaatcgccgatgacatg 568  Q
    ||||||||||| |||||   || || ||||||||||||||||||||||||||||||||| ||||||||||    
T  43888343 agggaaacgttaagttg---aacaaaaaggagggtgacgacaagaagaaagaaaaatcgtcgatgacatg 43888409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 39 - 208
Target Start/End: Complemental strand, 2774838 - 2774669
Alignment:
Q  39 gcttccataggtgcaaatttcacaaaccataagccattctaagccaatttcaagcacaaaatcaagtaagtt-ttttgaatcctattgcgttgctatttt 137  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  2774838 gcttccataggtgcgaatttcacaaaccataagccattccaagccaatttcaagcacaaaatcaagtaagtttttttgaatcctattgcgttgctatttt 2774739  T
Q  138 gtgattgatttgatagnnnnnnnnnngttaaattgcgattatagaggtttattgattttatgatgttatga 208  Q
    ||||||||||||||||          ||||||||| |||||||||||||||||||||||||||||||||||    
T  2774738 gtgattgatttgatag-gtttttttggttaaattgtgattatagaggtttattgattttatgatgttatga 2774669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 36774808 - 36775013
Alignment:
Q  1 gcataggagttaccaaaactccattgttacgnnnnnnngcttccataggtgcaaatttcacaaaccataagccattctaagccaatttcaagcacaaaat 100  Q
    ||||||||||| |||||||||||||||||||       |||||||||||||| ||||||||||| |||||||||||| |||| |||||||||||||||||    
T  36774808 gcataggagtttccaaaactccattgttacgtttttt-gcttccataggtgcgaatttcacaaagcataagccattccaagcgaatttcaagcacaaaat 36774906  T
Q  101 caagtaagttttttgaatcctattgcgttgctattttgtgattgatttgatagnnnnnnnnnngttaaattgcgattatagaggtttattgattttatga 200  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||| |||          |||||||||||||||||||||||||||||||||||||    
T  36774907 caagtaagttttttgaattctattgcattgctattttgtgattgatttgttag-ttttttttggttaaattgcgattatagaggtttattgattttatga 36775005  T
Q  201 tgttatga 208  Q
    ||||||||    
T  36775006 tgttatga 36775013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 22438494 - 22438290
Alignment:
Q  1 gcataggagttaccaaaactccattgttacgnnnnnnngcttccataggtgcaaatttcacaaaccataagccattctaagccaatttcaagcacaaaat 100  Q
    |||||| |||| |||||||||||||||||||       |||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||    
T  22438494 gcatagaagtttccaaaactccattgttacgtttttt-gcttccataggtgcgaatttcacaaaccataagccattcaaagacaatttcaagcacaaaat 22438396  T
Q  101 caagtaagttttttgaatcctattgcgttgctattttgtgattgatttgatagnnnnnnnnnngttaaattgcgattatagaggtttattgattttatga 200  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||||||          ||||||||| |||||||||||||||||||||||||||    
T  22438395 caagtaagttttttgaatcctattgtgttgcta-tttgtgattgatttgatag-ttttttttggttaaattgtgattatagaggtttattgattttatga 22438298  T
Q  201 tgttatga 208  Q
    ||||||||    
T  22438297 tgttatga 22438290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 433 - 568
Target Start/End: Original strand, 49816198 - 49816333
Alignment:
Q  433 tagaattgttacgacatgatgtaggttttgatcgtctatttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaataagaagaaggaggg 532  Q
    |||||||||||||| ||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||| || |  ||||||||    
T  49816198 tagaattgttacgatatgatgtagattttgatcgccaatttgtttatgtagatatgtctcagaatcagggaaacattgagttgaaaaacagaaaggaggg 49816297  T
Q  533 tgacgacaagaagaaagaaaaatcgccgatgacatg 568  Q
    ||| ||||||||||||||||||||||||||||||||    
T  49816298 tgatgacaagaagaaagaaaaatcgccgatgacatg 49816333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 282 - 380
Target Start/End: Original strand, 43887863 - 43887961
Alignment:
Q  282 tagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgatagaattgttac 380  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  43887863 tagaatttttaggattagatgaattgttgtatgatcgttgcgattagtttaggtttgttatgaaattttgttgttctgaatttgtgaaagaattgttac 43887961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 43887597 - 43887789
Alignment:
Q  1 gcataggagttaccaaaactccattgttacgnnnnnnngcttccataggtgcaaatttcacaaaccataagccattctaagccaatttcaagcacaaaat 100  Q
    ||||||||||| |||||||||||||||||||       |||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||||    
T  43887597 gcataggagtttccaaaactccattgttacgtttttt-gcttccataggtgcgaatttcacaaaccataagtcattccaagccaatttcaagcacaaaat 43887695  T
Q  101 caagtaagttttttgaatcctattgcgttgctattttgtgattgatttgatagnnnnnnnnnngttaaattgcgattatagaggtttattgattttatga 200  Q
    |||||||||||||||||||             |||||||||||||||||||||          ||||||||| |||||||||||||||||||||||||||    
T  43887696 caagtaagttttttgaatc-------------attttgtgattgatttgatag-ttttttttggttaaattgtgattatagaggtttattgattttatga 43887781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 73 - 208
Target Start/End: Original strand, 51026223 - 51026359
Alignment:
Q  73 cattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtgattgatttgatag-nnnnnnnnnngttaaatt 171  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||           ||||||||    
T  51026223 cattccaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcattgctattttgtgattgatttgttagttttttttttggttaaatt 51026322  T
Q  172 gcgattatagaggtttattgattttatgatgttatga 208  Q
    ||||||||| |||||||||||||||||||||||||||    
T  51026323 gcgattatataggtttattgattttatgatgttatga 51026359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 426 - 517
Target Start/End: Original strand, 17045573 - 17045664
Alignment:
Q  426 attattgtagaattgttacgacatgatgtaggttttgatcgtctatttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaa 517  Q
    ||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| ||| ||| |||||||||||    
T  17045573 attattgtataattgttacgacatgatgtaggttttgatcgccaatttgtttatgtagatatgtctcagaattaggaaaaagttgagttgaa 17045664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 39 - 145
Target Start/End: Complemental strand, 9719078 - 9718972
Alignment:
Q  39 gcttccataggtgcaaatttcacaaaccataagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttg 138  Q
    ||||||||| |||||||||||||||| |||||| ||||  |||||||||||||||| |||||||||||||||||||||||| |||| | ||| | |||||    
T  9719078 gcttccatatgtgcaaatttcacaaagcataagtcatttcaagccaatttcaagcataaaatcaagtaagttttttgaatcttatttcattgttgttttg 9718979  T
Q  139 tgattga 145  Q
    |||||||    
T  9718978 tgattga 9718972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 17045514 - 17045576
Alignment:
Q  323 gattagtttaggtttgttatgaaattttgttgttatgaatttgtgatagaattgttacgatta 385  Q
    ||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  17045514 gattagtttaggtctgttatgaaattttgttggtataaatttgtgatagaattgttacgatta 17045576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 93 - 208
Target Start/End: Original strand, 2567507 - 2567622
Alignment:
Q  93 cacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtgattgatttgatagnnnnnnnnnngttaaattgcgattatagaggtttattga 192  Q
    |||||||||||||||||| ||   |||||||| | |||||||||||||||||||||| |||           ||||||||||||||||||||||||||||    
T  2567507 cacaaaatcaagtaagttgttaccatcctattacattgctattttgtgattgatttgttagctttttttttattaaattgcgattatagaggtttattga 2567606  T
Q  193 ttttatgatgttatga 208  Q
    |||| |||||||||||    
T  2567607 ttttgtgatgttatga 2567622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 73 - 140
Target Start/End: Original strand, 44558818 - 44558885
Alignment:
Q  73 cattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtg 140  Q
    ||||| ||||||||||||| ||||||| |||||||||||||||||||||||||| ||| |||||||||    
T  44558818 cattccaagccaatttcaatcacaaaaacaagtaagttttttgaatcctattgcattgttattttgtg 44558885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 69 - 140
Target Start/End: Original strand, 49422255 - 49422326
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtg 140  Q
    ||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||| ||| | |||||||    
T  49422255 aagccattccaagccaatttcaatcacaaaaacaagtaagttttttgaatcctattgcattgttgttttgtg 49422326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 73 - 140
Target Start/End: Original strand, 51426708 - 51426775
Alignment:
Q  73 cattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtg 140  Q
    ||||| ||||||||||||| ||||||| |||||||||||||||||||||||||| ||||| |||||||    
T  51426708 cattccaagccaatttcaatcacaaaaacaagtaagttttttgaatcctattgcattgctgttttgtg 51426775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 330 - 388
Target Start/End: Original strand, 4910376 - 4910434
Alignment:
Q  330 ttaggtttgttatgaaattttgttgttatgaatttgtgatagaattgttacgattagtt 388  Q
    |||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  4910376 ttaggttttttatgaaatgttgttgttatgaatttgtgattgaattgttacgattagtt 4910434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 289 - 387
Target Start/End: Complemental strand, 17293161 - 17293063
Alignment:
Q  289 tttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgatagaattgttacgattagt 387  Q
    |||||| || |||||||||||||| ||| ||   ||||||||||| ||| ||| ||||| ||| ||||||||||||||||||||||||||| |||||||    
T  17293161 tttaggttttgatgaattgttgtagaattgtaaggattagtttagtttttttacgaaatgttggtgttatgaatttgtgatagaattgttaggattagt 17293063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 21015904 - 21015961
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    ||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  21015904 aagccattccaagccaatttcaatcacaaaaacaagtaagttttttgaatcctattgc 21015961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 300 - 385
Target Start/End: Original strand, 21410694 - 21410779
Alignment:
Q  300 atgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgatagaattgttacgatta 385  Q
    ||||||||||||| |||| ||  | |||||||||| || |||||||   |||||||||||||||||||||||||||||||||||||    
T  21410694 atgaattgttgtagaatcattagggttagtttagggtttttatgaatcgttgttgttatgaatttgtgatagaattgttacgatta 21410779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 519 - 568
Target Start/End: Original strand, 49790800 - 49790849
Alignment:
Q  519 aagaagaaggagggtgacgacaagaagaaagaaaaatcgccgatgacatg 568  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  49790800 aagaagaaggagggtgacgacaagaagaaagaaaaatcgtcgatgacatg 49790849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 433 - 517
Target Start/End: Original strand, 21410763 - 21410846
Alignment:
Q  433 tagaattgttacgacatgatgtaggttttgatcgtctatttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaa 517  Q
    ||||||||||||||  | || ||||||||||||| | |||| |||||||||||||||||||||||||||| |||||| |||||||    
T  21410763 tagaattgttacgat-taatttaggttttgatcgccaatttttttatgtagatatgtctcagaatcagggtaacgttcagttgaa 21410846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 68 - 140
Target Start/End: Complemental strand, 49572810 - 49572738
Alignment:
Q  68 taagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtg 140  Q
    |||| ||||| ||||||||||||| ||||||| ||||||||||||||||||| |||||| ||| |||||||||    
T  49572810 taagtcattccaagccaatttcaatcacaaaaacaagtaagttttttgaatcatattgcattgttattttgtg 49572738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 69 - 140
Target Start/End: Original strand, 955956 - 956027
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtg 140  Q
    ||||||||| ||||||||||||| |||||||  ||||||||||||||||||||||||| ||| | |||||||    
T  955956 aagccattccaagccaatttcaatcacaaaaataagtaagttttttgaatcctattgcattgttgttttgtg 956027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 46 - 145
Target Start/End: Original strand, 21410275 - 21410374
Alignment:
Q  46 taggtgcaaatttcacaaaccataagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtgattga 145  Q
    ||||||||| |||||  || ||||||| |||| || |||||||||||||||||||||||||||| ||||||  ||| |||| ||| | ||||||||||||    
T  21410275 taggtgcaattttcagcaaacataagctattcgaaaccaatttcaagcacaaaatcaagtaagtgttttgagccctgttgcattggttttttgtgattga 21410374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 93 - 201
Target Start/End: Original strand, 49815961 - 49816069
Alignment:
Q  93 cacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtgattgatttgatagnnnnnnnnnngttaaattgcgattatagaggtttattga 192  Q
    |||||||||||||||||| ||   |||||||| | ||||||||||||||||||||||  ||          ||||||||||||| |||||||||||||||    
T  49815961 cacaaaatcaagtaagttgttaccatcctattacattgctattttgtgattgatttgtgagttttttttttgttaaattgcgatcatagaggtttattga 49816060  T
Q  193 ttttatgat 201  Q
    |||||||||    
T  49816061 ttttatgat 49816069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 73 - 126
Target Start/End: Complemental strand, 28083894 - 28083841
Alignment:
Q  73 cattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    ||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  28083894 cattccaagccaatttcaatcacaaaaacaagtaagttttttgaatcctattgc 28083841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 208
Target Start/End: Complemental strand, 45941289 - 45941174
Alignment:
Q  93 cacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtgattgatttgatagnnnnnnnnnngttaaattgcgattatagaggtttattga 192  Q
    |||||||||||||| ||| ||   |||||||| | ||||| |||||||||||||||| |||           || |||||||||||||||||||||||||    
T  45941289 cacaaaatcaagtaggttgttaccatcctattacattgctgttttgtgattgatttgttagttttttttttattgaattgcgattatagaggtttattga 45941190  T
Q  193 ttttatgatgttatga 208  Q
    ||||||||||||||||    
T  45941189 ttttatgatgttatga 45941174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 126
Target Start/End: Complemental strand, 56140598 - 56140541
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    ||||||||| ||||||||||||| ||||||| |||||||||||||| |||||||||||    
T  56140598 aagccattccaagccaatttcaatcacaaaaacaagtaagtttttttaatcctattgc 56140541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 323 - 383
Target Start/End: Original strand, 49816152 - 49816212
Alignment:
Q  323 gattagtttaggtttgttatgaaattttgttgttatgaatttgtgatagaattgttacgat 383  Q
    |||||||||| || | |||||||||||||||| ||| ||||||||||||||||||||||||    
T  49816152 gattagtttaagtctcttatgaaattttgttggtataaatttgtgatagaattgttacgat 49816212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 145
Target Start/End: Original strand, 4909964 - 4910063
Alignment:
Q  46 taggtgcaaatttcacaaaccataagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtgattga 145  Q
    ||||||| | |||||| || |||||| ||||| |||| ||||||||||||||||||||||||||| ||   ||| |||||| ||| | ||||||||||||    
T  4909964 taggtgcgattttcaccaagcataagtcattccaagctaatttcaagcacaaaatcaagtaagttgttatcatcttattgcattgttgttttgtgattga 4910063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 164 - 207
Target Start/End: Original strand, 17045336 - 17045379
Alignment:
Q  164 gttaaattgcgattatagaggtttattgattttatgatgttatg 207  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  17045336 gttaaattgcgattatagatgtttattgattttatgatgttatg 17045379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 73 - 140
Target Start/End: Original strand, 33383974 - 33384041
Alignment:
Q  73 cattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtg 140  Q
    ||||| ||||||||||||| ||||||| ||||||||||||||||||| |||||| ||| | |||||||    
T  33383974 cattccaagccaatttcaatcacaaaaacaagtaagttttttgaatcttattgcattgttgttttgtg 33384041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 69 - 140
Target Start/End: Original strand, 34528330 - 34528401
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtg 140  Q
    ||||||||| ||||||||||||| ||||||| ||| |||||||| ||||||||||||| ||| | |||||||    
T  34528330 aagccattccaagccaatttcaatcacaaaaacaaataagttttctgaatcctattgcattgttgttttgtg 34528401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 37959636 - 37959581
Alignment:
Q  71 gccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    ||||||| ||||||||||||| ||||||| ||||||||||||||||||||| ||||    
T  37959636 gccattccaagccaatttcaatcacaaaaacaagtaagttttttgaatcctgttgc 37959581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 40352501 - 40352558
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    ||||||||  ||||||||||||| ||||||| |||||||||||||||||| |||||||    
T  40352501 aagccattacaagccaatttcaatcacaaaaacaagtaagttttttgaattctattgc 40352558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 41793529 - 41793586
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    ||||||||  |||||||||| || ||||||| ||||||||||||||||||||||||||    
T  41793529 aagccattagaagccaattttaatcacaaaaacaagtaagttttttgaatcctattgc 41793586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 69 - 126
Target Start/End: Complemental strand, 55799437 - 55799380
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    ||||||||  |||||||||| || ||||||| ||||||||||||||||||||||||||    
T  55799437 aagccattagaagccaattttaatcacaaaaacaagtaagttttttgaatcctattgc 55799380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 140
Target Start/End: Original strand, 34151783 - 34151851
Alignment:
Q  73 cattctaagccaatttcaagcacaaaatcaagtaag-ttttttgaatcctattgcgttgctattttgtg 140  Q
    ||||| ||||||||||||| ||||||| |||||||| |||||||||||||||||| ||| | |||||||    
T  34151783 cattccaagccaatttcaatcacaaaaccaagtaagtttttttgaatcctattgcattgttgttttgtg 34151851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 470 - 517
Target Start/End: Complemental strand, 21412647 - 21412600
Alignment:
Q  470 atttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaa 517  Q
    |||||||||||||||||||||||| |||||||| |||||| |||||||    
T  21412647 atttgtttatgtagatatgtctcataatcagggtaacgttcagttgaa 21412600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 69 - 140
Target Start/End: Complemental strand, 39590475 - 39590404
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtg 140  Q
    ||||||||| ||| ||||||||| ||||||| |||||||||||| |||| |||||||| ||| | |||||||    
T  39590475 aagccattccaagtcaatttcaatcacaaaaacaagtaagttttctgaaccctattgcattgttgttttgtg 39590404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 123
Target Start/End: Original strand, 6176042 - 6176096
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctat 123  Q
    ||||||||  |||||||||| || ||||||| |||||||||||||||||||||||    
T  6176042 aagccattagaagccaattttaatcacaaaaacaagtaagttttttgaatcctat 6176096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 126
Target Start/End: Complemental strand, 24076770 - 24076712
Alignment:
Q  68 taagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    |||||||||| ||||||||| ||| ||||||| |||||||||  |||||||||||||||    
T  24076770 taagccattccaagccaattacaaacacaaaaccaagtaagtgctttgaatcctattgc 24076712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 145
Target Start/End: Complemental strand, 37868166 - 37868100
Alignment:
Q  79 aagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtgattga 145  Q
    ||||||||||||| ||||||| |||||||||||||  ||||||||||| ||| | ||||| ||||||    
T  37868166 aagccaatttcaatcacaaaaacaagtaagtttttgtaatcctattgcattgttgttttgcgattga 37868100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 123
Target Start/End: Complemental strand, 49096226 - 49096172
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctat 123  Q
    ||||||||  |||||||||| || ||||||| |||||||||||||||||||||||    
T  49096226 aagccattagaagccaattttaatcacaaaaacaagtaagttttttgaatcctat 49096172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 9491188 - 9491123
Alignment:
Q  73 cattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttg 138  Q
    ||||| ||| ||||||||| |||||||  ||||||||||||| ||||||||||| ||| |||||||    
T  9491188 cattccaagtcaatttcaatcacaaaaataagtaagtttttttaatcctattgcattgttattttg 9491123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 208
Target Start/End: Complemental strand, 10315709 - 10315664
Alignment:
Q  164 gttaaattgcgattatagagg-tttattgattttatgatgttatga 208  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||    
T  10315709 gttaaattgcgattatagaggttttatggattttatgatgttatga 10315664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 396 - 441
Target Start/End: Complemental strand, 17293176 - 17293131
Alignment:
Q  396 aatttttaggattagtataggttttgataaattattgtagaattgt 441  Q
    |||||||||||||||| ||||||||||| |||| ||||||||||||    
T  17293176 aatttttaggattagtttaggttttgatgaattgttgtagaattgt 17293131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 201
Target Start/End: Complemental strand, 21171125 - 21171088
Alignment:
Q  164 gttaaattgcgattatagaggtttattgattttatgat 201  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  21171125 gttaaattgcgattatagatgtttattgattttatgat 21171088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 140
Target Start/End: Original strand, 6281027 - 6281094
Alignment:
Q  73 cattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtg 140  Q
    ||||| || |||||||||| ||||||| |||||||||||||| |||| |||||| ||| | |||||||    
T  6281027 cattccaaaccaatttcaatcacaaaaacaagtaagtttttttaatcatattgcattgttgttttgtg 6281094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 537 - 568
Target Start/End: Original strand, 17054305 - 17054336
Alignment:
Q  537 gacaagaagaaagaaaaatcgccgatgacatg 568  Q
    ||||||||||||||||||||||||||||||||    
T  17054305 gacaagaagaaagaaaaatcgccgatgacatg 17054336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 126
Target Start/End: Original strand, 8866890 - 8866975
Alignment:
Q  41 ttccataggtgcaaatttcacaaaccataagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    |||||||||||| | |||| | || | |||| ||||| || |||||| ||| |||||||||||||||||  |||||||||| ||||    
T  8866890 ttccataggtgcgattttctccaagcttaagtcattccaaaccaattacaaacacaaaatcaagtaagtgctttgaatccttttgc 8866975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 208
Target Start/End: Original strand, 14968661 - 14968777
Alignment:
Q  93 cacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtgattgatttgatagnnnnnnnnnngttaaattgcgattataga---ggtttat 189  Q
    |||||||||||||||||| ||   |||||||| | ||| |||||||||||||||||| |||          |||||||||||||||||||   | ||||     
T  14968661 cacaaaatcaagtaagttgttaccatcctattacattgatattttgtgattgatttgttag--ttttttttgttaaattgcgattatagagaggttttaa 14968758  T
Q  190 tgattttatgatgttatga 208  Q
    |||||||||||||||||||    
T  14968759 tgattttatgatgttatga 14968777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 344
Target Start/End: Original strand, 21410524 - 21410569
Alignment:
Q  299 gatgaattgttgtataatcgttgcgattagtttaggtttgttatga 344  Q
    |||||||||||||| |||||||  ||||||||||||||| ||||||    
T  21410524 gatgaattgttgtagaatcgttaggattagtttaggttttttatga 21410569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 93 - 153
Target Start/End: Complemental strand, 10315783 - 10315723
Alignment:
Q  93 cacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtgattgatttgatag 153  Q
    ||||| |||||||||||| ||   |||||||| | |||||||||||||||||||||| |||    
T  10315783 cacaatatcaagtaagttgttaccatcctattacattgctattttgtgattgatttgttag 10315723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 452 - 500
Target Start/End: Complemental strand, 17293063 - 17293015
Alignment:
Q  452 tgtaggttttgatcgtctatttgtttatgtagatatgtctcagaatcag 500  Q
    ||||||||||||||  | |||| | ||||||||||||||||||||||||    
T  17293063 tgtaggttttgatcaccaatttctctatgtagatatgtctcagaatcag 17293015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 250; Significance: 1e-138; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 250; E-Value: 1e-138
Query Start/End: Original strand, 271 - 568
Target Start/End: Original strand, 10051978 - 10052275
Alignment:
Q  271 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgata 370  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10051978 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgata 10052077  T
Q  371 gaattgttacgattagttacgttataatttttaggattagtataggttttgataaattattgtagaattgttacgacatgatgtaggttttgatcgtcta 470  Q
    ||||||||||||||||||||  ||||||||||||||| ||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |    
T  10052078 gaattgttacgattagttacagtataatttttaggatgagtttaggttttgatgaattattgtagaattggtacgacatgatgtaggttttgatcgtcga 10052177  T
Q  471 tttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaataagaagaaggagggtgacgacaagaagaaagaaaaatcgccgatgacatg 568  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| | |||||||||    
T  10052178 tttgtttatgtagatatgtctcagaatcaaggaaacgttgagttgaacaagaagaagaagggtgacgacaagaagaaagaaaaatcactgatgacatg 10052275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 271 - 568
Target Start/End: Complemental strand, 44929056 - 44928759
Alignment:
Q  271 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgata 370  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| |||||||||    
T  44929056 tgaaattatggtggaatttttaggattagatgaattgttgtataatcattgcaattagtttaggtttgttatgaaattttgttgttatgattttgtgata 44928957  T
Q  371 gaattgttacgattagttacgttataatttttaggattagtataggttttgataaattattgtagaattgttacgacatgatgtaggttttgatcgtcta 470  Q
    ||||||||||||||||||||| ||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| | |    
T  44928956 gaattgttacgattagttacggtataatttttatgattagtttaggttttgatgaattattgtagaattgttacgacatgatgtaggttttgatcgccga 44928857  T
Q  471 tttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaataagaagaaggagggtgacgacaagaagaaagaaaaatcgccgatgacatg 568  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  44928856 tttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaacaagaagaatgagggtgacgacaagaagaaagaaaaatcgtcgatgacatg 44928759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 271 - 568
Target Start/End: Complemental strand, 14633063 - 14632766
Alignment:
Q  271 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgata 370  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14633063 tgaaattatggtagaatttttaagattagatgaattgttgtataatcattgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgata 14632964  T
Q  371 gaattgttacgattagttacgttataatttttaggattagtataggttttgataaattattgtagaattgttacgacatgatgtaggttttgatcgtcta 470  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||   |    
T  14632963 gaattgttacgattagttacggtataatttttaggattagtttaggttttgatgaattattgtagaattgttacgtcatgatgtaggttttgatcgctga 14632864  T
Q  471 tttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaataagaagaaggagggtgacgacaagaagaaagaaaaatcgccgatgacatg 568  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||| ||||||| |||||||||||    
T  14632863 tttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaacaagaagaaggagggtaatgacaagaagaaataaaaatcaccgatgacatg 14632766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 271 - 568
Target Start/End: Original strand, 34470688 - 34470979
Alignment:
Q  271 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgata 370  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34470688 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgata 34470787  T
Q  371 gaattgttacgattagttacgttataatttttaggattagtataggttttgataaattattgtagaattgttacgacatgatgtaggttttgatcgtcta 470  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||      ||||||||||||| | |    
T  34470788 gaattgttacgattagttacggtataatttttaggattagtttaggttttgatgaattattgtagaattcttacgac------taggttttgatcgccga 34470881  T
Q  471 tttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaataagaagaaggagggtgacgacaagaagaaagaaaaatcgccgatgacatg 568  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  34470882 tttgtttatgtagatatgtctcagaattagggaaacgttgagttgaacaagaagaaggagggtgacgacaagaagaaagaaaaatcaccgatgacatg 34470979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 271 - 568
Target Start/End: Original strand, 46412909 - 46413206
Alignment:
Q  271 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgata 370  Q
    |||||| |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  46412909 tgaaatcatggcagaatttttatgattagatgaattgttgtataatcgttgcgattagtttaggtttattatgaaattttgttgttatgaatttgtgata 46413008  T
Q  371 gaattgttacgattagttacgttataatttttaggattagtataggttttgataaattattgtagaattgttacgacatgatgtaggttttgatcgtcta 470  Q
    ||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |    
T  46413009 gaattattacgattagttacggtataatttttaggattagtttaggttttgataaattattgtagaattgttacgatatgatgtaggttttgatcgccga 46413108  T
Q  471 tttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaataagaagaaggagggtgacgacaagaagaaagaaaaatcgccgatgacatg 568  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| | |||||||||    
T  46413109 tttgtttacgtagatatgtctcagaatcagggaaacattgagttgaacaagaagaaggagggtgacgacaagaagaaagaaaaatcactgatgacatg 46413206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 235; E-Value: 1e-129
Query Start/End: Original strand, 302 - 568
Target Start/End: Original strand, 11377633 - 11377899
Alignment:
Q  302 gaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgatagaattgttacgattagttacgttataatttt 401  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  11377633 gaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgatagaattgttacgatttgttacggtataatttt 11377732  T
Q  402 taggattagtataggttttgataaattattgtagaattgttacgacatgatgtaggttttgatcgtctatttgtttatgtagatatgtctcagaatcagg 501  Q
    ||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  11377733 tagaattagtttaggttttgatgaattattgtagaattgttacgacatgatgtaggttttgatcgccgatttgtttatgtagatatgtctcagaatcagg 11377832  T
Q  502 gaaacgttgagttgaataagaagaaggagggtgacgacaagaagaaagaaaaatcgccgatgacatg 568  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11377833 gaaacgttgagttgaacaagaagaaggagggtgacgacaagaagaaagaaaaatcgccgatgacatg 11377899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 271 - 567
Target Start/End: Complemental strand, 30194127 - 30193835
Alignment:
Q  271 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgata 370  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  30194127 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtt-gttatgaaattttgttgttatgaatttgtgata 30194029  T
Q  371 gaattgttacgattagttacgttataatttttaggattagtataggttttgataaattattgtagaattgttacgacatgatgtaggttttgatcgtcta 470  Q
     |||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||| ||||||||| |||||||||| |||||||||||| |    
T  30194028 aaattgttacgattagttacggtataatttttaggattagtttaggttttgatgaattattgtaaaattgttacaacatgatgtaagttttgatcgtcga 30193929  T
Q  471 tttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaataagaagaaggagggtgacgacaagaagaaagaaaaatcgccgatgacat 567  Q
    |||||||||||||||||||||||||||||||||||||||||| ||   || || |||||||||||||||||||||||||||||||||||||||||||    
T  30193928 tttgtttatgtagatatgtctcagaatcagggaaacgttgaggtg---aacaaaaaggagggtgacgacaagaagaaagaaaaatcgccgatgacat 30193835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 271 - 568
Target Start/End: Complemental strand, 49275004 - 49274718
Alignment:
Q  271 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgata 370  Q
    ||||||||||||||||||||||||||||||||||||||||           ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  49275004 tgaaattatggtagaatttttaggattagatgaattgttg-----------cgattagtttaggtttgttatgaaattttgttgctatgaatttgtgata 49274916  T
Q  371 gaattgttacgattagttacgttataatttttaggattagtataggttttgataaattattgtagaattgttacgacatgatgtaggttttgatcgtcta 470  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||  | |    
T  49274915 gaattgttacgattagttacggtataatttttaggattagtttaggttttgatgaattattgtagaattgttacgacatgatgtaggttttgatcaccga 49274816  T
Q  471 tttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaataagaagaaggagggtgacgacaagaagaaagaaaaatcgccgatgacatg 568  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  49274815 tttgtttatgtagatatgtctcagaatcagagaaacattgagttgaacaagaagaaggagggtgacgacaagaagaaagaaaaatcaccgatgacatg 49274718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 215; E-Value: 1e-117
Query Start/End: Original strand, 271 - 568
Target Start/End: Original strand, 47759583 - 47759870
Alignment:
Q  271 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgata 370  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  47759583 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaaatttgttatgaaattttgttgttatgaatttgtgata 47759682  T
Q  371 gaattgttacgattagttacgttataatttttaggattagtataggttttgataaattattgtagaattgttacgacatgatgtaggttttgatcgtcta 470  Q
    ||||||||||| |          |||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||||||||||||||| | |    
T  47759683 gaattgttacggt----------ataatttttaggattaatttaggttttgatgaattattgtagaattgttacgacatgatgtaggttttgatcgccga 47759772  T
Q  471 tttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaataagaagaaggagggtgacgacaagaagaaagaaaaatcgccgatgacatg 568  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  47759773 tttgtttaagtagatatgtctcaaaatcagggaaacgttgagttgaacaagaagaaggagggtgacgacaagaagaaagaaaaaacgccgatgacatg 47759870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 271 - 568
Target Start/End: Original strand, 50457873 - 50458168
Alignment:
Q  271 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgata 370  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||  ||||||||||||    
T  50457873 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgtgattggtttaggtttgttatgaaattttgttgtt--gaatttgtgata 50457970  T
Q  371 gaattgttacgattagttacgttataatttttaggattagtataggttttgataaattattgtagaattgttacgacatgatgtaggttttgatcgtcta 470  Q
    ||||||||||||| ||||||| |||||||| |||||||||| ||| || |||| |||||||||||||||||||| |||||||||||||||||||||   |    
T  50457971 gaattgttacgataagttacggtataatttataggattagtttagattatgatgaattattgtagaattgttacaacatgatgtaggttttgatcgctga 50458070  T
Q  471 tttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaataagaagaaggagggtgacgacaagaagaaagaaaaatcgccgatgacatg 568  Q
     ||||||||||||||||||||||||||||||||||||||||| || | |||||||| || ||||||||||||||||||||||||||||||||||||||    
T  50458071 gttgtttatgtagatatgtctcagaatcagggaaacgttgaggtggacaagaagaatgacggtgacgacaagaagaaagaaaaatcgccgatgacatg 50458168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 271 - 566
Target Start/End: Complemental strand, 51016879 - 51016589
Alignment:
Q  271 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgata 370  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||    
T  51016879 tgaaattatggtagaatttttaagattagatgaattgttgtataatcgttgcgattagtttaggtttgttgtgaaattttgttgtt--gaatttgtgata 51016782  T
Q  371 gaattgttacgattagttacgttataatttttaggattagtataggttttgataaattattgtagaattgttacgacatgatgtaggttttgatcgtcta 470  Q
    ||||||||||||||||||||| ||||| ||||||||||||| |||  | |||| |||||||||||||||||||||||||||||||||||||||||| | |    
T  51016781 gaattgttacgattagttacggtataagttttaggattagtttagaatatgatgaattattgtagaattgttacgacatgatgtaggttttgatcgccga 51016682  T
Q  471 tttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaataagaagaaggagggtgacgacaagaagaaagaaaaatcgccgatgaca 566  Q
    |||||||||||||||||||||||||||||||||||||||||| ||   || || |||||||||||| |||||||||||||||||||| ||||||||    
T  51016681 tttgtttatgtagatatgtctcagaatcagggaaacgttgaggtg---aacaaaaaggagggtgacaacaagaagaaagaaaaatcgtcgatgaca 51016589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 170; E-Value: 7e-91
Query Start/End: Original strand, 271 - 568
Target Start/End: Original strand, 51011929 - 51012204
Alignment:
Q  271 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgata 370  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  51011929 tgaaattatggtacaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaatttt-ttgttatgtatttgtgata 51012027  T
Q  371 gaattgttacgattagttacgttataatttttaggattagtataggttttgataaattattgtagaattgttacgacatgatgtaggttttgatcgtcta 470  Q
    |||| |||||||||||||||  ||||||||||||||||||| ||||||||||| ||||||||                     ||||||||||| | | |    
T  51012028 gaatggttacgattagttacaatataatttttaggattagtttaggttttgatgaattattg---------------------taggttttgattgccaa 51012106  T
Q  471 tttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaataagaagaaggagggtgacgacaagaagaaagaaaaatcgccgatgacatg 568  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51012107 tttgtttttgtagatatgtctcagaatcagggaaatgttgagttgaacaagaagaaggagggtgacgacaagaagaaagaaaaatcgccgatgacatg 51012204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 42321826 - 42322032
Alignment:
Q  1 gcataggagttaccaaaactccattgttacgnnnnnnngcttccataggtgcaaatttcacaaaccataagccattctaagccaatttcaagcacaaaat 100  Q
    ||||||||||| |||||||||||||||||||       |||||||||||||| ||||||||||| |||||||||||  |||||||||| ||||| |||||    
T  42321826 gcataggagtttccaaaactccattgttacgtttttt-gcttccataggtgcgaatttcacaaagcataagccatttcaagccaatttaaagcaaaaaat 42321924  T
Q  101 caagtaagttttttgaatcctattgcgttgctattttgtgattgatttgatagnnnnnnnnnngttaaattgcgattatagaggtttattgattttatga 200  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||| |||          |||||||||||||||||||||||||||||||||||||    
T  42321925 caagtaagttttttgaatcctattgcattgttattttgtgattgatttgttagttttttttttgttaaattgcgattatagaggtttattgattttatga 42322024  T
Q  201 tgttatga 208  Q
    ||||||||    
T  42322025 tgttatga 42322032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 39 - 204
Target Start/End: Original strand, 10051739 - 10051903
Alignment:
Q  39 gcttccataggtgcaaatttcacaaaccataagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttg 138  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| |||||||||||    
T  10051739 gcttccataggtgcgaatttcacaaagcataagccattctaagccaatttcaagcacaaaatcaagtaaggtttttgaatcatattgcattgctattttg 10051838  T
Q  139 tgattgatttgatagnnnnnnnnnngttaaattgcgattatagaggtttattgattttatgatgtt 204  Q
    ||||||||||| |||          |||||||||||||||||||||||||||||||||||||||||    
T  10051839 tgattgatttgttag-tttttttttgttaaattgcgattatagaggtttattgattttatgatgtt 10051903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 11377344 - 11377549
Alignment:
Q  1 gcataggagttaccaaaactccattgttacgnnnnnnngcttccataggtgcaaatttcacaaaccataagccattctaagccaatttcaagcacaaaat 100  Q
    ||||||||||| ||||||||| |||||||||       ||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  11377344 gcataggagtttccaaaactcaattgttacgtttttt-gcttcaataggtgcgaatttcacaaaccataagccattccaagccaatttcaagcacaaaat 11377442  T
Q  101 caagtaagttttttgaatcctattgcgttgctattttgtgattgatttgatagnnnnnnnnnngttaaattgcgattatagaggtttattgattttatga 200  Q
     || ||||||||| |||||| ||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||| |||||||||    
T  11377443 taattaagtttttcgaatccaattgcgttgctattttgtgattgatttgatag-ttttttttggttaaattgcgattatagaggtttattaattttatga 11377541  T
Q  201 tgttatga 208  Q
    ||||||||    
T  11377542 tgttatga 11377549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 39 - 208
Target Start/End: Original strand, 34470449 - 34470617
Alignment:
Q  39 gcttccataggtgcaaatttcacaaaccataagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttg 138  Q
    |||||||||||||| ||||||||||| ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  34470449 gcttccataggtgcgaatttcacaaagcataaaccattccaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcattgctattttg 34470548  T
Q  139 tgattgatttgatagnnnnnnnnnngttaaattgcgattatagaggtttattgattttatgatgttatga 208  Q
    ||||||||||| |||          ||||||||| |||| ||||||||||||||||||||||||||||||    
T  34470549 tgattgatttgttag-ttttttttggttaaattgggattgtagaggtttattgattttatgatgttatga 34470617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 44929337 - 44929129
Alignment:
Q  1 gcataggagttaccaaaactccattgttacgnnnnnnngcttccataggtgcaaatttcacaaaccataagccattctaagccaatttcaagcacaaaat 100  Q
    ||||||||||| ||||||||||||||||||        |||||||||||||| ||||||||||| |||||| ||||| ||| ||||||||||||||||||    
T  44929337 gcataggagtttccaaaactccattgttac-attttttgcttccataggtgcgaatttcacaaagcataagtcattccaagtcaatttcaagcacaaaat 44929239  T
Q  101 caagtaagttttttgaatcctattgcgttgctattttgtgattgatttgatag--nnnnnnnnnngttaaattgcgattatagaggtttattgattttat 198  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||            ||||||||| ||||||| |||||||||| ||||||    
T  44929238 caagtaagttttttgaatcctattgtgttgctattttgtgattgatttgatagtttttttttttggttaaattgtgattataaaggtttattggttttat 44929139  T
Q  199 gatgttatga 208  Q
    ||||||||||    
T  44929138 gatgttatga 44929129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 2 - 208
Target Start/End: Complemental strand, 51017157 - 51016949
Alignment:
Q  2 cataggagttaccaaaactccattgttacgnnnnnnngcttccataggtgcaaatttcacaaaccataagccattctaagccaatttcaagcacaaaatc 101  Q
    |||||||||| |||||||||||||||||||       |||||||||||||| ||||||||||| |||||| ||||| || |||||||| |||||||||||    
T  51017157 cataggagtttccaaaactccattgttacgtttttt-gcttccataggtgcgaatttcacaaagcataagtcattccaaaccaatttctagcacaaaatc 51017059  T
Q  102 aagtaagttttttgaatcctattgcgttgctattttgtgattgatttgatag---nnnnnnnnnngttaaattgcgattatagaggtttattgattttat 198  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||| |||             |||||||||||||||||||||||||||||||||||    
T  51017058 aagtaagttttttgaatcctattgcattgatattttgtgattgatttgttagtctttttttttttgttaaattgcgattatagaggtttattgattttat 51016959  T
Q  199 gatgttatga 208  Q
    ||||||||||    
T  51016958 gatgttatga 51016949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 39 - 208
Target Start/End: Original strand, 51011707 - 51011875
Alignment:
Q  39 gcttccataggtgcaaatttcacaaaccataagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttg 138  Q
    |||||||||||||| |||||||||||||||||| ||||| ||| ||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||    
T  51011707 gcttccataggtgcgaatttcacaaaccataagtcattcgaagtcaatttcaagcacaaaatcaagtaaattttttgtatcctactgcgttgctattttg 51011806  T
Q  139 tgattgatttgatagnnnnnnnnnngttaaattgcgattatagaggtttattgattttatgatgttatga 208  Q
    |||||||||||||||          ||||||||| ||||||||||||||||||| |||||||||||||||    
T  51011807 tgattgatttgatag-ttttttttggttaaattgtgattatagaggtttattgaatttatgatgttatga 51011875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 39 - 204
Target Start/End: Complemental strand, 49275224 - 49275061
Alignment:
Q  39 gcttccataggtgcaaatttcacaaaccataagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttg 138  Q
    |||||||||||||| ||||||||||| |||||| ||||  |||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||    
T  49275224 gcttccataggtgcgaatttcacaaagcataagtcatttcaagccaatttcaagcacaaaattaagtaagtttttttaatcctattgcattgctattttg 49275125  T
Q  139 tgattgatttgatagnnnnnnnnnngttaaattgcgattatagaggtttattgattttatgatgtt 204  Q
     |||||||||| |||          |||||||||||||||||||||||||||||||||||||||||    
T  49275124 cgattgatttgttag--ttttttttgttaaattgcgattatagaggtttattgattttatgatgtt 49275061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 271 - 363
Target Start/End: Original strand, 42322102 - 42322194
Alignment:
Q  271 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatt 363  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  42322102 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgtgattagtttaggtttgttatgaaattttgttgttatgaatt 42322194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 453 - 568
Target Start/End: Original strand, 42322211 - 42322326
Alignment:
Q  453 gtaggttttgatcgtctatttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaataagaagaaggagggtgacgacaagaagaaagaaa 552  Q
    |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| || |  |||||| ||| |||||||||||||||||    
T  42322211 gtaggttttgatcgccaatttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaacaacagaaaggagtgtggcgacaagaagaaagaaa 42322310  T
Q  553 aatcgccgatgacatg 568  Q
    ||||||||||||||||    
T  42322311 aatcgccgatgacatg 42322326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 352 - 517
Target Start/End: Complemental strand, 27188534 - 27188370
Alignment:
Q  352 ttgttatgaatttgtgatagaattgttacgattagttacgttataatttttaggattagtataggttttgataaattattgtagaattgttacgacatga 451  Q
    ||||||||||||||||||||||||||||||||||||||   |||| |||||||||||||| ||| ||||||  ||||||||||||||  ||||||  |      
T  27188534 ttgttatgaatttgtgatagaattgttacgattagttattgtatactttttaggattagtttagtttttgaggaattattgtagaatcattacga-ttag 27188436  T
Q  452 tgtaggttttgatcgtctatttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaa 517  Q
    | || |||||||  | | |||||||||||||||||||||||||||||| |||||||||||||||||    
T  27188435 tttaagttttgactgccaatttgtttatgtagatatgtctcagaatcaaggaaacgttgagttgaa 27188370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 73 - 208
Target Start/End: Original strand, 50457668 - 50457802
Alignment:
Q  73 cattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtgattgatttgatagnnnnnnnnnngttaaattg 172  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||           ||||||||    
T  50457668 cattccaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcatcgctattttgtgattgatttgttagttttttattt-ttaaattg 50457766  T
Q  173 cgattatagaggtttattgattttatgatgttatga 208  Q
    |||||||  |||||||||||||||||||||||||||    
T  50457767 cgattatgtaggtttattgattttatgatgttatga 50457802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 70 - 145
Target Start/End: Original strand, 20374378 - 20374453
Alignment:
Q  70 agccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtgattga 145  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||| |||||||    
T  20374378 agccattccaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcattgttgttttatgattga 20374453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 46 - 208
Target Start/End: Original strand, 27096130 - 27096292
Alignment:
Q  46 taggtgcaaatttcacaaaccataagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtgattga 145  Q
    ||||||| | |||||| || | |||||||||| |||||||||  ||| | |||||||||||||| |||||||||||||||| ||||| | ||||||||||    
T  27096130 taggtgcgattttcaccaagcttaagccattccaagccaattctaaggaaaaaatcaagtaagtgttttgaatcctattgcattgctgtgttgtgattga 27096229  T
Q  146 tttgatagnnnnnnnnnngttaaattgcgattataga-ggtttattgattttatgatgttatga 208  Q
     ||| |||          |||||||| |||||||||| | ||||||||||||||||| ||||||    
T  27096230 attgttag-ttgtttttggttaaatttcgattatagatgttttattgattttatgattttatga 27096292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 73 - 140
Target Start/End: Original strand, 55267585 - 55267652
Alignment:
Q  73 cattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtg 140  Q
    ||||| ||||||||||||| ||||||| |||||||||||||||||||||||||| ||| | |||||||    
T  55267585 cattccaagccaatttcaatcacaaaaacaagtaagttttttgaatcctattgcattgttgttttgtg 55267652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 73 - 126
Target Start/End: Original strand, 2267225 - 2267278
Alignment:
Q  73 cattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    ||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  2267225 cattccaagccaatttcaatcacaaaaacaagtaagttttttgaatcctattgc 2267278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 3493750 - 3493807
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    ||||||||  ||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  3493750 aagccattagaagccaatttcaatcacaaaaacaagtaagttttttgaatcctattgc 3493807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 3497444 - 3497501
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    ||||||||  ||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  3497444 aagccattagaagccaatttcaatcacaaaaacaagtaagttttttgaatcctattgc 3497501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 73 - 126
Target Start/End: Complemental strand, 36136502 - 36136449
Alignment:
Q  73 cattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    ||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  36136502 cattccaagccaatttcaatcacaaaaacaagtaagttttttgaatcctattgc 36136449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 208
Target Start/End: Original strand, 47759398 - 47759512
Alignment:
Q  93 cacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtgattgatttgatagnnnnnnnnnngttaaattgcgattatagaggtttattga 192  Q
    |||||||||||||||||| ||   |||||||| | |||||||||||||||||||||| |||           |||||||||||||  |||||||||||||    
T  47759398 cacaaaatcaagtaagttgttaccatcctattacattgctattttgtgattgatttgttagttttttttta-ttaaattgcgattgcagaggtttattga 47759496  T
Q  193 ttttatgatgttatga 208  Q
    ||||||||||||||||    
T  47759497 ttttatgatgttatga 47759512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 73 - 126
Target Start/End: Complemental strand, 50998558 - 50998505
Alignment:
Q  73 cattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    ||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  50998558 cattccaagccaatttcaatcacaaaaacaagtaagttttttgaatcctattgc 50998505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 69 - 145
Target Start/End: Original strand, 45098970 - 45099046
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtgattga 145  Q
    ||||||||| ||| |||||| || ||||||| |||||||||||||||||||||||||| ||| | ||||||| ||||    
T  45098970 aagccattccaagtcaattttaatcacaaaaacaagtaagttttttgaatcctattgcattgttgttttgtggttga 45099046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 79 - 126
Target Start/End: Original strand, 8397740 - 8397787
Alignment:
Q  79 aagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  8397740 aagccaattacaagcacaaaatcaagtaagtgttttgaatcctattgc 8397787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 69 - 140
Target Start/End: Complemental strand, 43571591 - 43571520
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtg 140  Q
    ||||||||| ||| ||||||||| |||| || |||||||||||||||||||||||||| ||| | |||||||    
T  43571591 aagccattccaagtcaatttcaatcacagaaacaagtaagttttttgaatcctattgcattgttgttttgtg 43571520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 73 - 140
Target Start/End: Original strand, 44490515 - 44490582
Alignment:
Q  73 cattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtg 140  Q
    ||||| ||||||||||||| ||||||| ||||||||||||||||||| |||||| ||| | |||||||    
T  44490515 cattccaagccaatttcaatcacaaaaacaagtaagttttttgaatcttattgcattgttgttttgtg 44490582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 73 - 140
Target Start/End: Original strand, 55205437 - 55205504
Alignment:
Q  73 cattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtg 140  Q
    ||||| |||||||||| || ||||||| |||||||||||||||||||||||||| ||| | |||||||    
T  55205437 cattccaagccaattttaatcacaaaaacaagtaagttttttgaatcctattgcattgttgttttgtg 55205504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 140
Target Start/End: Complemental strand, 2430180 - 2430114
Alignment:
Q  74 attctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtg 140  Q
    |||| |||| |||||||| ||||||| |||||||||||||||||||||||||| ||| | |||||||    
T  2430180 attccaagctaatttcaatcacaaaaacaagtaagttttttgaatcctattgcattgttgttttgtg 2430114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 123
Target Start/End: Original strand, 34645726 - 34645780
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctat 123  Q
    ||||||||| ||||||||||| | ||||||| |||||||||||||||||||||||    
T  34645726 aagccattccaagccaatttcgatcacaaaaacaagtaagttttttgaatcctat 34645780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 145
Target Start/End: Complemental strand, 18442026 - 18441954
Alignment:
Q  73 cattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtgattga 145  Q
    ||||| |||||||||  ||||||| |||||||||||| ||||||||| |||||| ||| | ||||||||||||    
T  18442026 cattccaagccaattctaagcacataatcaagtaagtgttttgaatcatattgcattgttgttttgtgattga 18441954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 145
Target Start/End: Complemental strand, 19487100 - 19487028
Alignment:
Q  73 cattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtgattga 145  Q
    ||||| |||||||||  ||||||| |||||||||||| ||||||||| |||||| ||| | ||||||||||||    
T  19487100 cattccaagccaattctaagcacataatcaagtaagtgttttgaatcatattgcattgttgttttgtgattga 19487028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 41579640 - 41579584
Alignment:
Q  71 gccattctaagccaatttcaagcacaaaatcaagtaagtt-ttttgaatcctattgc 126  Q
    ||||||| ||||||||||||| ||||||| |||||||||| ||||||||||||||||    
T  41579640 gccattccaagccaatttcaatcacaaaaacaagtaagtttttttgaatcctattgc 41579584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 140
Target Start/End: Original strand, 46345095 - 46345163
Alignment:
Q  72 ccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtg 140  Q
    |||||| ||||||||||||| ||||||| |||||||||||||| |||| |||||| ||| | |||||||    
T  46345095 ccattccaagccaatttcaatcacaaaaacaagtaagtttttttaatcttattgcattgttgttttgtg 46345163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 204
Target Start/End: Original strand, 46412724 - 46412834
Alignment:
Q  93 cacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtgattgatttgatagnnnnnnnnnngttaaattgcgattatagaggtttattga 192  Q
    |||||||||||||||||| ||   |||||||| | |||||||||||||||||||||  |||          ||||||||||||||||||| ||||||| |    
T  46412724 cacaaaatcaagtaagttgttaccatcctattacattgctattttgtgattgatttattagttttttttt-gttaaattgcgattatagaagtttattaa 46412822  T
Q  193 ttttatgatgtt 204  Q
    ||||||||||||    
T  46412823 ttttatgatgtt 46412834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 145
Target Start/End: Original strand, 52567928 - 52568000
Alignment:
Q  73 cattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtgattga 145  Q
    ||||| ||| ||||||||| ||||||| ||||||||||||||||||| |||||| ||| | ||||||| ||||    
T  52567928 cattccaagtcaatttcaatcacaaaaacaagtaagttttttgaatcatattgcattgttgttttgtggttga 52568000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 525 - 568
Target Start/End: Complemental strand, 18441716 - 18441673
Alignment:
Q  525 aaggagggtgacgacaagaagaaagaaaaatcgccgatgacatg 568  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||    
T  18441716 aaggagggtgatgacaagaagaaagaaaaatcgcctatgacatg 18441673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 525 - 568
Target Start/End: Complemental strand, 19486790 - 19486747
Alignment:
Q  525 aaggagggtgacgacaagaagaaagaaaaatcgccgatgacatg 568  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||    
T  19486790 aaggagggtgatgacaagaagaaagaaaaatcgcctatgacatg 19486747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 2645631 - 2645677
Alignment:
Q  79 aagccaatttcaagcacaaaatcaagtaagttttttgaatcctattg 125  Q
    |||||||||| || ||||||| |||||||||||||||||||||||||    
T  2645631 aagccaattttaatcacaaaaacaagtaagttttttgaatcctattg 2645677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 123
Target Start/End: Original strand, 2950531 - 2950585
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctat 123  Q
    ||||||||  |||||||||| || ||||||| |||||||||||||||||||||||    
T  2950531 aagccattagaagccaattttaatcacaaaaacaagtaagttttttgaatcctat 2950585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 299 - 345
Target Start/End: Complemental strand, 27188571 - 27188525
Alignment:
Q  299 gatgaattgttgtataatcgttgcgattagtttaggtttgttatgaa 345  Q
    ||||||||||||||||||||||  |||| ||||||||||||||||||    
T  27188571 gatgaattgttgtataatcgttatgattggtttaggtttgttatgaa 27188525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 123
Target Start/End: Complemental strand, 34051221 - 34051167
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctat 123  Q
    ||||||||  |||||||||| || ||||||| |||||||||||||||||||||||    
T  34051221 aagccattagaagccaattttaatcacaaaaacaagtaagttttttgaatcctat 34051167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 126
Target Start/End: Complemental strand, 43478737 - 43478679
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagtt-ttttgaatcctattgc 126  Q
    ||||||||| ||||||||||||| ||||||| |||||||||| |||| |||||||||||    
T  43478737 aagccattccaagccaatttcaatcacaaaaacaagtaagttttttttaatcctattgc 43478679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 123
Target Start/End: Complemental strand, 46406499 - 46406445
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctat 123  Q
    ||||||||  |||||||||| || ||||||| |||||||||||||||||||||||    
T  46406499 aagccattagaagccaattttaatcacaaaaacaagtaagttttttgaatcctat 46406445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 123
Target Start/End: Original strand, 49138779 - 49138833
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctat 123  Q
    ||||||||  |||||||||| || ||||||| |||||||||||||||||||||||    
T  49138779 aagccattagaagccaattttaatcacaaaaacaagtaagttttttgaatcctat 49138833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 41805568 - 41805511
Alignment:
Q  83 caatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtg 140  Q
    ||||||||| ||||||| |||||||||||||| ||||||||||| ||| | |||||||    
T  41805568 caatttcaatcacaaaaacaagtaagtttttttaatcctattgcattgttgttttgtg 41805511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 126
Target Start/End: Original strand, 49217260 - 49217313
Alignment:
Q  73 cattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    ||||| || |||||||||| ||||||| |||||||||||||| |||||||||||    
T  49217260 cattccaaaccaatttcaatcacaaaaacaagtaagtttttttaatcctattgc 49217313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 165 - 201
Target Start/End: Complemental strand, 14633161 - 14633125
Alignment:
Q  165 ttaaattgcgattatagaggtttattgattttatgat 201  Q
    |||||||||||||||| ||||||||||||||||||||    
T  14633161 ttaaattgcgattataaaggtttattgattttatgat 14633125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 140
Target Start/End: Complemental strand, 7247774 - 7247707
Alignment:
Q  73 cattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtg 140  Q
    ||||| ||| ||||||||| || ||||  ||||||||||||||||||||||||| ||| | |||||||    
T  7247774 cattccaagtcaatttcaatcaaaaaaataagtaagttttttgaatcctattgcattgttgttttgtg 7247707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 140
Target Start/End: Original strand, 24700891 - 24700958
Alignment:
Q  73 cattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtg 140  Q
    ||||| ||||||| ||||| || |||| ||||||||||||||||||| |||||| ||| | |||||||    
T  24700891 cattccaagccaaattcaatcaaaaaaacaagtaagttttttgaatcttattgcattgttgttttgtg 24700958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 140
Target Start/End: Original strand, 34691795 - 34691862
Alignment:
Q  73 cattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtg 140  Q
    ||||| |||| |||||||| ||||||| ||||||||| || ||||||||||||| ||| | |||||||    
T  34691795 cattccaagctaatttcaatcacaaaaacaagtaagtattctgaatcctattgcattgttgttttgtg 34691862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 74 - 140
Target Start/End: Original strand, 4002884 - 4002949
Alignment:
Q  74 attctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtg 140  Q
    |||| |||||||||| || ||||||| ||||||||||||| |||||||||||| ||| | |||||||    
T  4002884 attccaagccaattt-aatcacaaaaacaagtaagtttttagaatcctattgcattgttgttttgtg 4002949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 126
Target Start/End: Original strand, 13894396 - 13894449
Alignment:
Q  73 cattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    ||||| ||||||||||||| ||| ||| |||||| ||||||| |||||||||||    
T  13894396 cattccaagccaatttcaatcaccaaaacaagtaggtttttttaatcctattgc 13894449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 454 - 509
Target Start/End: Original strand, 34692117 - 34692173
Alignment:
Q  454 taggttttgatcgtctatttgttta-tgtagatatgtctcagaatcagggaaacgtt 509  Q
    ||||||||||||| |  ||| |||| |||||||||||||||||||||||| ||||||    
T  34692117 taggttttgatcgccattttttttaatgtagatatgtctcagaatcagggtaacgtt 34692173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 454 - 509
Target Start/End: Original strand, 55267900 - 55267956
Alignment:
Q  454 taggttttgatcgtctatttgttta-tgtagatatgtctcagaatcagggaaacgtt 509  Q
    ||||||||||||| |  ||| |||| |||||||||||||||||||||||| ||||||    
T  55267900 taggttttgatcgccattttttttaatgtagatatgtctcagaatcagggtaacgtt 55267956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 246; Significance: 1e-136; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 271 - 568
Target Start/End: Original strand, 17537530 - 17537827
Alignment:
Q  271 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgata 370  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  17537530 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgtgattagtttaggtttgttatgaaattttgttgttatgaatttgtgata 17537629  T
Q  371 gaattgttacgattagttacgttataatttttaggattagtataggttttgataaattattgtagaattgttacgacatgatgtaggttttgatcgtcta 470  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |    
T  17537630 gaattgttacgattagttacggtataatttttaggattagtttaggttttgatgaattattgtagaattgttacgacatgatgcaggttttgatcgtcga 17537729  T
Q  471 tttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaataagaagaaggagggtgacgacaagaagaaagaaaaatcgccgatgacatg 568  Q
    ||| ||||||||||||||| ||||||||| || |||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  17537730 tttatttatgtagatatgtatcagaatcaagggaacgttgagttgaacaagaagaaggagggcgacgacaagaagaaagaaaaatcaccgatgacatg 17537827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 240; E-Value: 1e-132
Query Start/End: Original strand, 271 - 568
Target Start/End: Complemental strand, 6978417 - 6978123
Alignment:
Q  271 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgata 370  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  6978417 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgaatagtttaggtttgttatgaaattttgttgttatgaatttgtgata 6978318  T
Q  371 gaattgttacgattagttacgttataatttttaggattagtataggttttgataaattattgtagaattgttacgacatgatgtaggttttgatcgtcta 470  Q
    ||||||||||||||||||||  ||||||||||||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||||||||||  | |    
T  6978317 gaattgttacgattagttacagtataatttttaggattagtttaggttttgattaattattgtagaagtgttacgacatgatgtaggttttgatcaccga 6978218  T
Q  471 tttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaataagaagaaggagggtgacgacaagaagaaagaaaaatcgccgatgacatg 568  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||   || ||||||||||||||||||||||||||||||| ||||||||||||    
T  6978217 tttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaat---aaaaaggagggtgacgacaagaagaaagaaaaattgccgatgacatg 6978123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 271 - 568
Target Start/End: Original strand, 23719722 - 23720015
Alignment:
Q  271 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgata 370  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||    
T  23719722 tgaaattatggtagaatttttatgattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttaagaatttgt-ata 23719820  T
Q  371 gaattgttacgattagttacgttataatttttaggattagtataggttttgataaattattgtagaattgttacgacatgatgtaggttttgatcgtcta 470  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||| | |    
T  23719821 gaattgttacgattagttacggtataatttttaggattagtttaggttttgatgaattattgtagaattgttacgacatgaagtaggttttgatcgccaa 23719920  T
Q  471 tttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaataagaagaaggagggtgacgacaagaagaaagaaaaatcgccgatgacatg 568  Q
    |||||||||||||||||||||||||||||||||||||||||| ||   || || ||||||||||||||||||||||||||||||||||||||||||||    
T  23719921 tttgtttatgtagatatgtctcagaatcagggaaacgttgaggtg---aacaaaaaggagggtgacgacaagaagaaagaaaaatcgccgatgacatg 23720015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 271 - 568
Target Start/End: Original strand, 24107394 - 24107687
Alignment:
Q  271 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgata 370  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||    
T  24107394 tgaaattatggtagaatttttatgattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttaagaatttgt-ata 24107492  T
Q  371 gaattgttacgattagttacgttataatttttaggattagtataggttttgataaattattgtagaattgttacgacatgatgtaggttttgatcgtcta 470  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||| | |    
T  24107493 gaattgttacgattagttacggtataatttttaggattagtttaggttttgatgaattattgtagaattgttacgacatgaagtaggttttgatcgccaa 24107592  T
Q  471 tttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaataagaagaaggagggtgacgacaagaagaaagaaaaatcgccgatgacatg 568  Q
    |||||||||||||||||||||||||||||||||||||||||| ||   || || ||||||||||||||||||||||||||||||||||||||||||||    
T  24107593 tttgtttatgtagatatgtctcagaatcagggaaacgttgaggtg---aacaaaaaggagggtgacgacaagaagaaagaaaaatcgccgatgacatg 24107687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 271 - 568
Target Start/End: Original strand, 34520339 - 34520634
Alignment:
Q  271 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgata 370  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  34520339 tgaaattatggtagaatttttaggattagatgaattgttctataatagttgcgattagtttaggtttgttatgaaattttgttgtt--gaatttgtgata 34520436  T
Q  371 gaattgttacgattagttacgttataatttttaggattagtataggttttgataaattattgtagaattgttacgacatgatgtaggttttgatcgtcta 470  Q
    ||||||||||||||||||||| |||||||||||||||| || || ||| |||| |||||||||||| ||||||||||||||||| ||||||||||| | |    
T  34520437 gaattgttacgattagttacggtataatttttaggattcgtttaagttatgatgaattattgtagagttgttacgacatgatgtgggttttgatcgccga 34520536  T
Q  471 tttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaataagaagaaggagggtgacgacaagaagaaagaaaaatcgccgatgacatg 568  Q
     |||||||||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34520537 gttgtttatgtagatatgtctcaaaatcagggaaacgttgaggtgaacaagaagaaggagggtgacgacaagaagaaagaaaaatcgccgatgacatg 34520634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 271 - 562
Target Start/End: Original strand, 10359173 - 10359462
Alignment:
Q  271 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgata 370  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||    
T  10359173 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttattatgaaattttgttgtt--gaatttgtgata 10359270  T
Q  371 gaattgttacgattagttacgttataatttttaggattagtataggttttgataaattattgtagaattgttacgacatgatgtaggttttgatcgtcta 470  Q
    ||||||||||||||||||||   |||||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||||| |||||||| | | |    
T  10359271 gaattgttacgattagttacagaataatttttaggattagtttaggttatgatgaattattgtagaattgttacgacatgatgtatgttttgattgccga 10359370  T
Q  471 tttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaataagaagaaggagggtgacgacaagaagaaagaaaaatcgccgat 562  Q
     |||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| |||||    
T  10359371 gttgtttatgtagatatgtctcagaattagggaaacgttgaggtgaacaagaagaaggagggtgacgacaagaagaaagaaaaatcaccgat 10359462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 271 - 477
Target Start/End: Complemental strand, 5421918 - 5421711
Alignment:
Q  271 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgata 370  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||    
T  5421918 tgaaattatggtagaatttttatgattagatgaattgttgtataatcgttgcgattaatttaggtttgttatgaaattttgttgttatgaatttgtggta 5421819  T
Q  371 gaattgttacgattagttacgttataatttttaggattagtatagg-ttttgataaattattgtagaattgttacgacatgatgtaggttttgatcgtct 469  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||| ||||||| |||||||||||||||||||||| ||||||||||||||||||| |     
T  5421818 gaattgttacgattagttacggtataatttttaggattagtttaggtttttgatgaattattgtagaattgttacgaaatgatgtaggttttgatcgccg 5421719  T
Q  470 atttgttt 477  Q
    ||||||||    
T  5421718 atttgttt 5421711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 299 - 568
Target Start/End: Complemental strand, 33405307 - 33405042
Alignment:
Q  299 gatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgatagaattgttacgattagttacgttataat 398  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||||||||| | ||||||    
T  33405307 gatgaattgttgtataatcgttacgattagtttatgtttgttatgaatttttgtcgttatgaatttgtgatagaattgttacgattagttatggtataat 33405208  T
Q  399 ttttaggattagtataggttttgataaattattgtagaattgttacgacatgatgtaggttttgatcgtctatttgtttatgtagatatgtctcagaatc 498  Q
    ||||||||||||| ||| ||||||| |||||||||||||| ||||| |  |  | ||||||||||||| | ||||||||||||| |||||||||||||||    
T  33405207 ttttaggattagtttagtttttgatgaattattgtagaatcgttac-aattagtttaggttttgatcgccaatttgtttatgtatatatgtctcagaatc 33405109  T
Q  499 agggaaacgttgagttgaataagaagaaggagggtgacgacaagaagaaagaaaaatcgccgatgacatg 568  Q
    || ||||| ||||||||   || || ||||||||||| ||||||||||||||||| || || ||||||||    
T  33405108 agagaaacattgagttg---aacaaaaaggagggtgatgacaagaagaaagaaaagtcacctatgacatg 33405042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 2 - 208
Target Start/End: Complemental strand, 5422194 - 5421989
Alignment:
Q  2 cataggagttaccaaaactccattgttacgnnnnnnngcttccataggtgcaaatttcacaaaccataagccattctaagccaatttcaagcacaaaatc 101  Q
    ||||||||||  ||||||||||||||||||       |||||||||||||| |||||||||||||||||||||||  |||||||||||||||||||||||    
T  5422194 cataggagttttcaaaactccattgttacgtttttt-gcttccataggtgcgaatttcacaaaccataagccatttcaagccaatttcaagcacaaaatc 5422096  T
Q  102 aagtaagttttttgaatcctattgcgttgctattttgtgattgatttgatagnnnnnnnnnngttaaattgcgattatagaggtttattgattttatgat 201  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||          ||||||||| |||| |||||||||||||||||||||||    
T  5422095 aagtaagttttttgaattctattgcgttgctattttgtgattgatttgatagtttttttttggttaaattgtgattctagaggtttattgattttatgat 5421996  T
Q  202 gttatga 208  Q
    |||||||    
T  5421995 gttatga 5421989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 2 - 208
Target Start/End: Original strand, 37311062 - 37311265
Alignment:
Q  2 cataggagttaccaaaactccattgttacgnnnnnnngcttccataggtgcaaatttcacaaaccataagccattctaagccaatttcaagcacaaaatc 101  Q
    |||||||||| |||||| ||||||||||||       |||||||||||||| ||||||||||| ||||||||| || |||||||||||||||||||||||    
T  37311062 cataggagtttccaaaaatccattgttacgtttttt-gcttccataggtgcgaatttcacaaagcataagccaatccaagccaatttcaagcacaaaatc 37311160  T
Q  102 aagtaagttttttgaatcctattgcgttgctattttgtgattgatttgatagnnnnnnnnnngttaaattgcgattatagaggtttattgattttatgat 201  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||||| |||          ||||||||| ||||||||||||||||||||||||||||    
T  37311161 aagtaagttttctgaatcctattgcattgctattttgtgattgatttgttag--tttttttggttaaattgtgattatagaggtttattgattttatgat 37311258  T
Q  202 gttatga 208  Q
    |||||||    
T  37311259 gttatga 37311265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 39 - 204
Target Start/End: Original strand, 17537290 - 17537455
Alignment:
Q  39 gcttccataggtgcaaatttcacaaaccataagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttg 138  Q
    |||||||||||||| ||||||||| | |||||| ||||| |||| ||||||||||||||||||||||||||||| ||||||||||||| |||| ||||||    
T  17537290 gcttccataggtgcgaatttcacagagcataagtcattccaagctaatttcaagcacaaaatcaagtaagttttgtgaatcctattgcattgcaattttg 17537389  T
Q  139 tgattgatttgatagnnnnnnnnnngttaaattgcgattatagaggtttattgattttatgatgtt 204  Q
    ||||||||||| |||          ||||||||| |||||||||||||||||||||||||||||||    
T  17537390 tgattgatttgttagtttttttttggttaaattgtgattatagaggtttattgattttatgatgtt 17537455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 2 - 208
Target Start/End: Original strand, 23719445 - 23719651
Alignment:
Q  2 cataggagttaccaaaactccattgttacgnnnnnnngcttccataggtgcaaatttcacaaaccataagccattctaagccaatttcaagcacaaaatc 101  Q
    |||||||||| |||||||||||||||||||       |||||| ||||||| |||||||||||  ||||| ||||| ||||||||||||||||||||||     
T  23719445 cataggagtttccaaaactccattgttacgtttttt-gcttccgtaggtgcgaatttcacaaagtataagtcattccaagccaatttcaagcacaaaatt 23719543  T
Q  102 aagtaagttttttgaatcctattgcgttgctattttgtgattgatttgatag-nnnnnnnnnngttaaattgcgattatagaggtttattgattttatga 200  Q
    ||||||||||||||| ||||||||| ||||||||||||||||| |||| |||           || ||||||||||||||||||||||||||||||||||    
T  23719544 aagtaagttttttgagtcctattgcattgctattttgtgattggtttgttagttttttttttggtgaaattgcgattatagaggtttattgattttatga 23719643  T
Q  201 tgttatga 208  Q
    ||||||||    
T  23719644 tgttatga 23719651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 2 - 208
Target Start/End: Original strand, 24107117 - 24107323
Alignment:
Q  2 cataggagttaccaaaactccattgttacgnnnnnnngcttccataggtgcaaatttcacaaaccataagccattctaagccaatttcaagcacaaaatc 101  Q
    |||||||||| |||||||||||||||||||       |||||| ||||||| |||||||||||  ||||| ||||| ||||||||||||||||||||||     
T  24107117 cataggagtttccaaaactccattgttacgtttttt-gcttccgtaggtgcgaatttcacaaagtataagtcattccaagccaatttcaagcacaaaatt 24107215  T
Q  102 aagtaagttttttgaatcctattgcgttgctattttgtgattgatttgatag-nnnnnnnnnngttaaattgcgattatagaggtttattgattttatga 200  Q
    ||||||||||||||| ||||||||| ||||||||||||||||| |||| |||           || ||||||||||||||||||||||||||||||||||    
T  24107216 aagtaagttttttgagtcctattgcattgctattttgtgattggtttgttagttttttttttggtgaaattgcgattatagaggtttattgattttatga 24107315  T
Q  201 tgttatga 208  Q
    ||||||||    
T  24107316 tgttatga 24107323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 453 - 568
Target Start/End: Original strand, 37311445 - 37311560
Alignment:
Q  453 gtaggttttgatcgtctatttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaataagaagaaggagggtgacgacaagaagaaagaaa 552  Q
    |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| || |  ||||||||||||||||||||||||||||    
T  37311445 gtaggttttgatcgccaatttgtttatgtagatatgtctcagaatcagggaaacgttgagttgaacaacagaaaggagggtgacgacaagaagaaagaaa 37311544  T
Q  553 aatcgccgatgacatg 568  Q
    |||||  |||||||||    
T  37311545 aatcgttgatgacatg 37311560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 271 - 381
Target Start/End: Original strand, 37311336 - 37311445
Alignment:
Q  271 tgaaattatggtagaatttttaggattagatgaattgttgtataatcgttgcgattagtttaggtttgttatgaaattttgttgttatgaatttgtgata 370  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |  || ||||||||||| |||||||||||||  || ||    
T  37311336 tgaaattatggtagaatttttaggattagatgaattgttatataatcgttgcgattagttttgaatttttatgaaatttcgttgttatgaattattg-ta 37311434  T
Q  371 gaattgttacg 381  Q
    |||||||||||    
T  37311435 gaattgttacg 37311445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 70 - 208
Target Start/End: Original strand, 34520132 - 34520268
Alignment:
Q  70 agccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtgattgatttgatagnnnnnnnnnngttaaa 169  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||            |||||    
T  34520132 agccattccaagctaatttcaagcacaaaatcaagtaagttttttgaatcctattgcattgctattttgtgattgatttgtta--atttttttgattaaa 34520229  T
Q  170 ttgcgattatagaggtttattgattttatgatgttatga 208  Q
    | ||||||||| ||||||||| |||||||||||||||||    
T  34520230 tcgcgattatataggtttatttattttatgatgttatga 34520268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 70 - 208
Target Start/End: Original strand, 10358963 - 10359102
Alignment:
Q  70 agccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtgattgatttgatag--nnnnnnnnnngtta 167  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| |||            ||||    
T  10358963 agccattccaagccaatttcaaacacaaaatcaagtaagttttttgaatcctattgcattgctaatttgtgattgatttgttagttttttttttttgtta 10359062  T
Q  168 aattgcgattatagaggtttattgattttatgatgttatga 208  Q
    ||||||| ||||| |||||||||||||||||||||||||||    
T  10359063 aattgcg-ttatataggtttattgattttatgatgttatga 10359102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 485 - 529
Target Start/End: Complemental strand, 5421434 - 5421390
Alignment:
Q  485 tatgtctcagaatcagggaaacgttgagttgaataagaagaagga 529  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  5421434 tatgtctcagaatcagggaaacgttgagttgaataagaagaagga 5421390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 69 - 125
Target Start/End: Complemental strand, 8268657 - 8268601
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattg 125  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||    
T  8268657 aagccattctaagccaatttcaatcacaaaaacaagtaagttttttgaattctattg 8268601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 70 - 126
Target Start/End: Complemental strand, 14181740 - 14181684
Alignment:
Q  70 agccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    |||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  14181740 agccattccaagccaatttcaatcacaaaaacaagtaagttttttgaatcctattgc 14181684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 69 - 140
Target Start/End: Complemental strand, 43493192 - 43493121
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtg 140  Q
    ||||||||| ||||||||||||| ||||||| |||| ||||||||||||||||||||| ||| | |||||||    
T  43493192 aagccattccaagccaatttcaatcacaaaaacaagcaagttttttgaatcctattgcattgttgttttgtg 43493121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 68 - 126
Target Start/End: Original strand, 39798607 - 39798665
Alignment:
Q  68 taagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    |||||||||  ||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  39798607 taagccattacaagccaatttcaatcacaaaaacaagtaagttttttgaatcctattgc 39798665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 126
Target Start/End: Complemental strand, 22003309 - 22003252
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    ||||||||  ||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  22003309 aagccattacaagccaatttcaatcacaaaaacaagtaagttttttgaatcctattgc 22003252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 69 - 140
Target Start/End: Complemental strand, 23409410 - 23409341
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtg 140  Q
    ||||||||| ||||||||||||| ||||||  |||||||||||||||||||||||||| ||| | |||||||    
T  23409410 aagccattccaagccaatttcaatcacaaa--caagtaagttttttgaatcctattgcattgttgttttgtg 23409341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 73 - 140
Target Start/End: Complemental strand, 35493245 - 35493178
Alignment:
Q  73 cattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtg 140  Q
    ||||| ||||||||||||| ||||||| |||||||||||||| ||||||||||| ||| | |||||||    
T  35493245 cattccaagccaatttcaatcacaaaaacaagtaagtttttttaatcctattgcattgttgttttgtg 35493178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 73 - 140
Target Start/End: Original strand, 40675906 - 40675973
Alignment:
Q  73 cattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtg 140  Q
    ||||| ||||||||||||| ||||||| ||||| |||||||||||||||||||| ||| | |||||||    
T  40675906 cattccaagccaatttcaatcacaaaaacaagtcagttttttgaatcctattgcattgttgttttgtg 40675973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 126
Target Start/End: Original strand, 29090745 - 29090799
Alignment:
Q  72 ccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    |||||| ||||||||||||| ||||||| |||||||||||||| |||||||||||    
T  29090745 ccattccaagccaatttcaaccacaaaaacaagtaagtttttttaatcctattgc 29090799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 71 - 124
Target Start/End: Original strand, 2917840 - 2917893
Alignment:
Q  71 gccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctatt 124  Q
    ||||||| ||||||||||||||||||||| ||||||| | ||||||||||||||    
T  2917840 gccattccaagccaatttcaagcacaaaaacaagtaaatgttttgaatcctatt 2917893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 3936028 - 3936085
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    ||||||||  |||||||||| || ||||||| ||||||||||||||||||||||||||    
T  3936028 aagccattagaagccaattttaatcacaaaaacaagtaagttttttgaatcctattgc 3936085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 69 - 126
Target Start/End: Complemental strand, 17426273 - 17426216
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    ||||||||  |||||||||| || ||||||| ||||||||||||||||||||||||||    
T  17426273 aagccattagaagccaattttaatcacaaaaacaagtaagttttttgaatcctattgc 17426216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 164 - 208
Target Start/End: Complemental strand, 33405528 - 33405483
Alignment:
Q  164 gttaaattgcgattatagaggttt-attgattttatgatgttatga 208  Q
    |||||||||||||||||||||||| |||||||||||||||||||||    
T  33405528 gttaaattgcgattatagaggttttattgattttatgatgttatga 33405483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 73 - 126
Target Start/End: Original strand, 41497642 - 41497695
Alignment:
Q  73 cattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    ||||| ||||||||||||| |||||||  |||||||||||||||||||||||||    
T  41497642 cattcaaagccaatttcaatcacaaaaataagtaagttttttgaatcctattgc 41497695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 73 - 140
Target Start/End: Original strand, 23786295 - 23786362
Alignment:
Q  73 cattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtg 140  Q
    ||||| ||||||||||||| ||||||| |||||||||||| | ||||||||||| ||| | |||||||    
T  23786295 cattccaagccaatttcaatcacaaaaacaagtaagttttctaaatcctattgcattgttgttttgtg 23786362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 208
Target Start/End: Complemental strand, 6978604 - 6978488
Alignment:
Q  93 cacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtgattgatttgatagnnnnnnnnnn-gttaaattgcgattatagaggtttattg 191  Q
    |||||||||||||||||| |    |||||||| | |||||||||||||||||||||| |||           ||||| |||||||||||||| |||||||    
T  6978604 cacaaaatcaagtaagttgtcatcatcctattacattgctattttgtgattgatttgttagtttttttttttgttaagttgcgattatagagatttattg 6978505  T
Q  192 attttatgatgttatga 208  Q
    ||||| |||||||||||    
T  6978504 attttttgatgttatga 6978488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 123
Target Start/End: Complemental strand, 43984209 - 43984155
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctat 123  Q
    ||||||||  |||||||||| || ||||||| |||||||||||||||||||||||    
T  43984209 aagccattagaagccaattttaatcacaaaaacaagtaagttttttgaatcctat 43984155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 126
Target Start/End: Complemental strand, 3943094 - 3943041
Alignment:
Q  73 cattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    ||||| ||||||||||||| ||||||| ||||||| |||||| |||||||||||    
T  3943094 cattccaagccaatttcaatcacaaaaacaagtaaatttttttaatcctattgc 3943041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 122
Target Start/End: Complemental strand, 28476975 - 28476922
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatccta 122  Q
    ||||||||  ||||||||||||| ||||||| |||||||||||| |||||||||    
T  28476975 aagccattacaagccaatttcaatcacaaaaacaagtaagttttgtgaatccta 28476922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 73 - 126
Target Start/End: Complemental strand, 16583498 - 16583444
Alignment:
Q  73 cattctaagccaatttcaagcacaaaatcaagtaagtt-ttttgaatcctattgc 126  Q
    ||||| ||||||||||||| ||||||| |||||||||| |||| |||||||||||    
T  16583498 cattccaagccaatttcaatcacaaaaacaagtaagttttttttaatcctattgc 16583444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 454 - 500
Target Start/End: Original strand, 19470435 - 19470483
Alignment:
Q  454 taggttttgatcgtctatttgttt--atgtagatatgtctcagaatcag 500  Q
    |||||||||||||||| ||| |||  |||||||||||||||||||||||    
T  19470435 taggttttgatcgtcttttttttttaatgtagatatgtctcagaatcag 19470483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 114
Target Start/End: Complemental strand, 34639221 - 34639176
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagtttttt 114  Q
    ||||||||| |||||||||||||  |||||| ||||||||||||||    
T  34639221 aagccattccaagccaatttcaataacaaaaacaagtaagtttttt 34639176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 39 - 201
Target Start/End: Complemental strand, 2105 - 1942
Alignment:
Q  39 gcttccataggtgcaaatttcacaaaccataagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttg 138  Q
    ||||||| |||||| ||||||||||| |||||||||||| ||| ||||||||||||||||| |||||||||||| ||||| ||||||  ||| | |||||    
T  2105 gcttccaaaggtgcgaatttcacaaagcataagccattccaagtcaatttcaagcacaaaaacaagtaagttttgtgaattctattgtattgatgttttg 2006  T
Q  139 tgattgatttgatagnnnnnnnnnngttaaattgcgattatagagg-tttattgattttatgat 201  Q
    ||||||| ||| |||          |||||||| ||||||||| || |||||||||||||||||    
T  2005 tgattgaattgttagtttttttttggttaaatttcgattatagtggttttattgattttatgat 1942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 140
Target Start/End: Original strand, 16559 - 16628
Alignment:
Q  71 gccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtg 140  Q
    ||||||| ||| ||||||||||||||||| ||||||| |||||||||||||||||| ||| | |||||||    
T  16559 gccattccaagtcaatttcaagcacaaaaacaagtaaattttttgaatcctattgcattgttgttttgtg 16628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 126
Target Start/End: Complemental strand, 3491 - 3434
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    ||||||||| ||||||||||||| ||||||| |||||||||||| |||||||||||||    
T  3491 aagccattccaagccaatttcaatcacaaaaacaagtaagttttctgaatcctattgc 3434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 73 - 126
Target Start/End: Original strand, 10847 - 10900
Alignment:
Q  73 cattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    |||| |||||||||||||| ||||||| ||||||||||||||||||| ||||||    
T  10847 cattttaagccaatttcaatcacaaaaacaagtaagttttttgaatcatattgc 10900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 84745 - 84802
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    ||||||||  |||||||||| || ||||||| ||||||||||||||||||||||||||    
T  84745 aagccattagaagccaattttaatcacaaaaacaagtaagttttttgaatcctattgc 84802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 5496 - 5553
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgc 126  Q
    ||||||||  ||||||||||||| || |||| |||||||||||||| |||||||||||    
T  5496 aagccattacaagccaatttcaatcataaaaacaagtaagtttttttaatcctattgc 5553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 69 - 125
Target Start/End: Complemental strand, 112 - 56
Alignment:
Q  69 aagccattctaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattg 125  Q
    ||||||||  ||| |||||| || ||||||| |||||||||||||||||||||||||    
T  112 aagccattacaagtcaattttaatcacaaaaacaagtaagttttttgaatcctattg 56  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University