View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4107_low_32 (Length: 236)
Name: NF4107_low_32
Description: NF4107
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4107_low_32 |
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Alignment Details
Target: chr7 (Bit Score: 158; Significance: 3e-84; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 6550301 - 6550081
Alignment:
| Q |
1 |
aaagattaacatgatcacaaacatcacgaactaatattaaatcattaataatattagatttaattagattatcacccccaacaaaaacaaccaaatnnnn |
100 |
Q |
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| T |
6550301 |
aaagattaacatgatcacaaacatcacgaactaatattaaatcattaatgatattagatttaattagattatcacccccaacaaaaacaaccaaataaaa |
6550202 |
T |
|
| Q |
101 |
nnnnntcatttcattcttatagatatgaatnnnnnnnngtttaaagcaagattaactatattattttattaataataatcttaactatctatcataaaga |
200 |
Q |
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| T |
6550201 |
aaaaatcatttcattcttatagatatgaataaaaaaaagtttaaaccaagattaactatattattttattaataataatcttaactatttatcataaaga |
6550102 |
T |
|
| Q |
201 |
cataaatagatagaatgaaat |
221 |
Q |
| |
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||||||||||||||||||||| |
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| T |
6550101 |
cataaatagatagaatgaaat |
6550081 |
T |
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