View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4111_low_32 (Length: 307)
Name: NF4111_low_32
Description: NF4111
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4111_low_32 |
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Alignment Details
Target: chr5 (Bit Score: 272; Significance: 1e-152; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 20 - 295
Target Start/End: Original strand, 8467627 - 8467902
Alignment:
| Q |
20 |
aagctgcaagcttagtatcttcttgaaatttgctgggagcaccggcttgaacttctcgtccatgtatttcgctatagcgtaagggcttgagccattcctc |
119 |
Q |
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| T |
8467627 |
aagctgcaagcttagtatcttcttgaaatttgctgggagcaccggcttgaacttctcgtccatgtatttcgctatagcgtaagggcttgagccattcctc |
8467726 |
T |
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| Q |
120 |
tcctttagagccagtaaagcctccttaaccatctacaaaaataaataagtatacgcttaaatcaaccagtagtttgaaactatattgaaagtttgaaaca |
219 |
Q |
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| T |
8467727 |
tcctttagagccagtaaagcctccttaaccatctacaaaaataaataagtatacgcttaaatcaaccagaagtttgaaactatattgaaagtttgaaaca |
8467826 |
T |
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| Q |
220 |
attacctcaaaatatggaggatgagaagctgttttggtttgtttggaagcttttggtttcatttccttcacaggtt |
295 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8467827 |
attacctcaaaatatggaggatgagaagctgttttggtttgtttggaagcttttggtttcatttccttcacaggtt |
8467902 |
T |
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