View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4111_low_47 (Length: 240)
Name: NF4111_low_47
Description: NF4111
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4111_low_47 |
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Alignment Details
Target: chr7 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 5545687 - 5545463
Alignment:
| Q |
1 |
atgtacgtgttcactttcattagacatgccatattttgtatacgatttactcgagacttaacataaaagatcaaactaatcttaatgtgactaatgttac |
100 |
Q |
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| T |
5545687 |
atgtacgtgttcactttcattagacatgctatattttgtacacgatttactcgagacttaacataaaggatcaaactaatcctagtgtgactaatgttac |
5545588 |
T |
|
| Q |
101 |
atcaaattaaaatgtaaaagatggaagtataacttaaaataaacgcctgaggccaaatataaaattaaacttgtataatatttaattctaatcatgtgtc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5545587 |
atcaaattaaaatgtaaaagatggaagtataacttaaaataaacgcctgaggccaaatataaaattaaacttgtataatatttaattctaatcatgtgtc |
5545488 |
T |
|
| Q |
201 |
tatttatgttgggacatgtttttag |
225 |
Q |
| |
|
||||||||||||||||||||||||| |
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|
| T |
5545487 |
tatttatgttgggacatgtttttag |
5545463 |
T |
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