View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4114_low_26 (Length: 241)
Name: NF4114_low_26
Description: NF4114
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4114_low_26 |
 |  |
|
| [»] scaffold0012 (1 HSPs) |
 |  |  |
|
| [»] scaffold0011 (1 HSPs) |
 |  |  |
|
| [»] scaffold0508 (1 HSPs) |
 |  |  |
|
| [»] scaffold0147 (1 HSPs) |
 |  |  |
|
| [»] scaffold0022 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: scaffold0012 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0012
Description:
Target: scaffold0012; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 48744 - 48802
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggtttaattcttctaaaa |
82 |
Q |
| |
|
||||||||||| |||||||| ||||||||||||||||||||| |||||||| ||||||| |
|
|
| T |
48744 |
gttaaatatgtttttgatccctataaatatattaacttttcgttttaattcctctaaaa |
48802 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 13)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 41421440 - 41421498
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggtttaattcttctaaaa |
82 |
Q |
| |
|
||||||||||| ||| |||||||||||||||| ||||||||| |||||||||||||||| |
|
|
| T |
41421440 |
gttaaatatgtttttaatccttataaatatatcaacttttcgttttaattcttctaaaa |
41421498 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 2629867 - 2629925
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggtttaattcttctaaaa |
82 |
Q |
| |
|
||||||||||| |||||||| ||||||||||| ||||||||| |||| ||| ||||||| |
|
|
| T |
2629867 |
gttaaatatgtttttgatccctataaatatatcaacttttcgttttagttcctctaaaa |
2629925 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 10313505 - 10313447
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggtttaattcttctaaaa |
82 |
Q |
| |
|
||||||||||| ||||||||||||||||||| ||||||||| |||| ||| ||||||| |
|
|
| T |
10313505 |
gttaaatatgtttttgatccttataaatataccaacttttcgttttagttcctctaaaa |
10313447 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 82
Target Start/End: Complemental strand, 6376778 - 6376715
Alignment:
| Q |
19 |
ttagtgttaaatatgtatttgatccttataaatatattaacttttcggtttaattcttctaaaa |
82 |
Q |
| |
|
|||| ||||||||||| |||| ||||||||||||||| |||||||| |||| ||| ||||||| |
|
|
| T |
6376778 |
ttagggttaaatatgtttttggtccttataaatatatcaacttttcattttagttcctctaaaa |
6376715 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 82
Target Start/End: Complemental strand, 9740066 - 9740003
Alignment:
| Q |
19 |
ttagtgttaaatatgtatttgatccttataaatatattaacttttcggtttaattcttctaaaa |
82 |
Q |
| |
|
|||| ||||||||||| |||| ||| ||||||||||| |||||||| |||||||| ||||||| |
|
|
| T |
9740066 |
ttagggttaaatatgtttttgctccctataaatatatcaacttttcattttaattcctctaaaa |
9740003 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 63
Target Start/End: Complemental strand, 10590778 - 10590739
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaactttt |
63 |
Q |
| |
|
||||||||||| |||| ||||||||||||||||||||||| |
|
|
| T |
10590778 |
gttaaatatgtttttggtccttataaatatattaactttt |
10590739 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 82
Target Start/End: Complemental strand, 38204005 - 38203938
Alignment:
| Q |
15 |
ttttttagtgttaaatatgtatttgatccttataaatatattaacttttcggtttaattcttctaaaa |
82 |
Q |
| |
|
|||||||| ||||||||||| |||| ||| ||||||||| | ||||||||| |||| | ||||||||| |
|
|
| T |
38204005 |
ttttttagcgttaaatatgtttttggtccctataaatatgtcaacttttcgttttagtccttctaaaa |
38203938 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 5192315 - 5192257
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggtttaattcttctaaaa |
82 |
Q |
| |
|
||||||||||| |||| ||| ||||||||||| ||||||||| |||||| ||| ||||| |
|
|
| T |
5192315 |
gttaaatatgtttttggtccctataaatatatcaacttttcgttttaatccttgtaaaa |
5192257 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 6732209 - 6732151
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggtttaattcttctaaaa |
82 |
Q |
| |
|
||||||||||| |||| ||| ||||||||| ||||||||||| |||||| | ||||||| |
|
|
| T |
6732209 |
gttaaatatgtttttggtccctataaatatgttaacttttcgttttaatccctctaaaa |
6732151 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 10590284 - 10590330
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggttta |
70 |
Q |
| |
|
||||||||||| |||||||||||||||||| |||| |||||| |||| |
|
|
| T |
10590284 |
gttaaatatgtttttgatccttataaatatgttaatttttcgtttta |
10590330 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 26400866 - 26400924
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggtttaattcttctaaaa |
82 |
Q |
| |
|
||||||||||| |||||| |||||||||||| |||||||| |||||||| ||||||| |
|
|
| T |
26400866 |
gttaaatatgtttttgatacttataaatataccaacttttcattttaattcctctaaaa |
26400924 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 36450208 - 36450254
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggttta |
70 |
Q |
| |
|
||||||||||| ||||||||||||||||||| ||||||||| |||| |
|
|
| T |
36450208 |
gttaaatatgtttttgatccttataaatataccaacttttcgtttta |
36450254 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 27252037 - 27251985
Alignment:
| Q |
18 |
tttagtgttaaatatgtatttgatccttataaatatattaacttttcggttta |
70 |
Q |
| |
|
||||| ||||||||||| |||| ||| ||||||||||| ||||||||| |||| |
|
|
| T |
27252037 |
tttagggttaaatatgtttttggtccctataaatatatcaacttttcgtttta |
27251985 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 18)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 38389937 - 38389882
Alignment:
| Q |
15 |
ttttttagtgttaaatatgtatttgatccttataaatatattaacttttcggttta |
70 |
Q |
| |
|
|||||||| ||||||||||| ||||||||||||||||||| |||||||||| |||| |
|
|
| T |
38389937 |
ttttttagggttaaatatgtttttgatccttataaatatactaacttttcgtttta |
38389882 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 35024884 - 35024827
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggtttaattcttctaaaa |
82 |
Q |
| |
|
||||||||||| ||| ||||||||||||||| |||||||||| |||||||||||||||| |
|
|
| T |
35024884 |
gttaaatatgttttt-atccttataaatatactaacttttcgttttaattcttctaaaa |
35024827 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 13175903 - 13175960
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggtttaattcttctaaaa |
82 |
Q |
| |
|
||||||||||| ||||||||||||||||||| |||||||||| |||| ||| ||||||| |
|
|
| T |
13175903 |
gttaaatatgtttttgatccttataaatata-taacttttcgttttagttcctctaaaa |
13175960 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 16975656 - 16975714
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggtttaattcttctaaaa |
82 |
Q |
| |
|
||||||||||| |||| ||| ||||||||||||||||||||| |||||| | ||||||| |
|
|
| T |
16975656 |
gttaaatatgtttttggtccctataaatatattaacttttcgttttaatccctctaaaa |
16975714 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 21142297 - 21142239
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggtttaattcttctaaaa |
82 |
Q |
| |
|
||||||||| | |||| ||| ||||||||||||||||||||| |||| ||||||||||| |
|
|
| T |
21142297 |
gttaaatatatttttggtccatataaatatattaacttttcgttttagttcttctaaaa |
21142239 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 27751679 - 27751621
Alignment:
| Q |
25 |
ttaaatatgtatttgatccttataaa-tatattaacttttcggtttaattcttctaaaa |
82 |
Q |
| |
|
|||||||||| ||| ||||||||||| ||||||||||||||| |||||| ||||||||| |
|
|
| T |
27751679 |
ttaaatatgttttttatccttataaaatatattaacttttcgttttaatccttctaaaa |
27751621 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 5728683 - 5728729
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggttta |
70 |
Q |
| |
|
||||||||||| |||||||| ||||||||||| ||||||||| |||| |
|
|
| T |
5728683 |
gttaaatatgtttttgatccctataaatatatcaacttttcgtttta |
5728729 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 22199628 - 22199686
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggtttaattcttctaaaa |
82 |
Q |
| |
|
||||||||||| |||| |||||||||||||| ||||||||| |||||| | ||||||| |
|
|
| T |
22199628 |
gttaaatatgtttttggtccttataaatataccaacttttcgttttaatccctctaaaa |
22199686 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 23769439 - 23769497
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggtttaattcttctaaaa |
82 |
Q |
| |
|
||||||||||| |||||| | ||||||||||| ||||||||| |||| ||| ||||||| |
|
|
| T |
23769439 |
gttaaatatgtttttgattcctataaatatatcaacttttcgttttagttcctctaaaa |
23769497 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 23796954 - 23796896
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggtttaattcttctaaaa |
82 |
Q |
| |
|
||||||||||| |||| ||||||||||||| | ||||||||| |||| ||| ||||||| |
|
|
| T |
23796954 |
gttaaatatgtttttggtccttataaatatgtcaacttttcgttttagttcctctaaaa |
23796896 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 70
Target Start/End: Complemental strand, 29197759 - 29197713
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggttta |
70 |
Q |
| |
|
||||||||||| |||||||| ||||||||||| |||||||| ||||| |
|
|
| T |
29197759 |
gttaaatatgtttttgatccctataaatatatcaacttttcagttta |
29197713 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 42787653 - 42787711
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggtttaattcttctaaaa |
82 |
Q |
| |
|
||||||||||| ||| |||||||||||||| |||||||| | |||||| ||||||||| |
|
|
| T |
42787653 |
gttaaatatgtttttagtccttataaatatactaactttttgttttaatccttctaaaa |
42787711 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 2289068 - 2289031
Alignment:
| Q |
18 |
tttagtgttaaatatgtatttgatccttataaatatat |
55 |
Q |
| |
|
||||| ||||||||||| |||||||||||||||||||| |
|
|
| T |
2289068 |
tttagggttaaatatgtttttgatccttataaatatat |
2289031 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 35213370 - 35213419
Alignment:
| Q |
14 |
attttttagtgttaaatatgtatttgatccttataaatatattaactttt |
63 |
Q |
| |
|
||||||||| ||||||||||| |||| |||||||||||||| ||||||| |
|
|
| T |
35213370 |
attttttagggttaaatatgtttttggtccttataaatatacaaactttt |
35213419 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 1030770 - 1030810
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttc |
64 |
Q |
| |
|
||||||||||| ||||||||||||||||||| |||||||| |
|
|
| T |
1030770 |
gttaaatatgtttttgatccttataaatataccaacttttc |
1030810 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 13349281 - 13349321
Alignment:
| Q |
23 |
tgttaaatatgtatttgatccttataaatatattaactttt |
63 |
Q |
| |
|
|||||||||||| |||| ||||||||||||||| ||||||| |
|
|
| T |
13349281 |
tgttaaatatgtttttggtccttataaatatatcaactttt |
13349321 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 23767697 - 23767649
Alignment:
| Q |
15 |
ttttttagtgttaaatatgtatttgatccttataaatatattaactttt |
63 |
Q |
| |
|
|||||| ||||||||||||| |||| | | ||||||||||||||||||| |
|
|
| T |
23767697 |
tttttttgtgttaaatatgtttttggtgcctataaatatattaactttt |
23767649 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 45434492 - 45434544
Alignment:
| Q |
18 |
tttagtgttaaatatgtatttgatccttataaatatattaacttttcggttta |
70 |
Q |
| |
|
||||| ||||||||||| |||| ||||||||||| ||| ||||||||| |||| |
|
|
| T |
45434492 |
tttagggttaaatatgtttttggtccttataaatgtatcaacttttcgtttta |
45434544 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 38; Significance: 0.000000000001; HSPs: 23)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 41014054 - 41014001
Alignment:
| Q |
17 |
ttttagtgttaaatatgtatttgatccttataaatatattaacttttcggttta |
70 |
Q |
| |
|
|||||| ||||||||||| |||| ||||||||||||||||||||||||| |||| |
|
|
| T |
41014054 |
ttttagggttaaatatgtttttggtccttataaatatattaacttttcgtttta |
41014001 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 30903686 - 30903634
Alignment:
| Q |
18 |
tttagtgttaaatatgtatttgatccttataaatatattaacttttcggttta |
70 |
Q |
| |
|
||||| ||||||||||| |||||||| ||||||||||||||||||||| |||| |
|
|
| T |
30903686 |
tttagggttaaatatgtttttgatccctataaatatattaacttttcgtttta |
30903634 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 70
Target Start/End: Complemental strand, 18803869 - 18803823
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggttta |
70 |
Q |
| |
|
||||||||||| |||||||||||||||||||| ||||||||| |||| |
|
|
| T |
18803869 |
gttaaatatgtttttgatccttataaatatatcaacttttcgtttta |
18803823 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 70
Target Start/End: Complemental strand, 28036625 - 28036579
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggttta |
70 |
Q |
| |
|
||||||||||| |||||||||||||||||||| ||||||||| |||| |
|
|
| T |
28036625 |
gttaaatatgtttttgatccttataaatatataaacttttcgtttta |
28036579 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 70
Target Start/End: Original strand, 19228279 - 19228324
Alignment:
| Q |
25 |
ttaaatatgtatttgatccttataaatatattaacttttcggttta |
70 |
Q |
| |
|
|||||||||| |||||||||||||||||||| ||||||||| |||| |
|
|
| T |
19228279 |
ttaaatatgtttttgatccttataaatatatcaacttttcgtttta |
19228324 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 584860 - 584900
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttc |
64 |
Q |
| |
|
||||||||||| |||| |||||||||||||||||||||||| |
|
|
| T |
584860 |
gttaaatatgtttttggtccttataaatatattaacttttc |
584900 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 2443736 - 2443678
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggtttaattcttctaaaa |
82 |
Q |
| |
|
||||||||||| |||| ||| ||||||||||||||||||| | |||| | ||||||||| |
|
|
| T |
2443736 |
gttaaatatgtttttggtccctataaatatattaactttttgttttagtccttctaaaa |
2443678 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 2688125 - 2688183
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggtttaattcttctaaaa |
82 |
Q |
| |
|
||||||||||| |||||||| ||||||||||| ||||||| | |||| | ||||||||| |
|
|
| T |
2688125 |
gttaaatatgtttttgatccctataaatatatcaactttttgttttagtccttctaaaa |
2688183 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 8721582 - 8721640
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggtttaattcttctaaaa |
82 |
Q |
| |
|
||||||||||| |||| ||| ||||||||||| ||||||||| |||||| | ||||||| |
|
|
| T |
8721582 |
gttaaatatgtttttggtccctataaatatatcaacttttcgttttaatccctctaaaa |
8721640 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 12229667 - 12229713
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggttta |
70 |
Q |
| |
|
||||||||||| ||||||||||||||||||| ||||||||| |||| |
|
|
| T |
12229667 |
gttaaatatgtttttgatccttataaatataccaacttttcgtttta |
12229713 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 24518490 - 24518548
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggtttaattcttctaaaa |
82 |
Q |
| |
|
||||||||||| |||||||| ||||||||||| ||||||| | |||||| | ||||||| |
|
|
| T |
24518490 |
gttaaatatgtttttgatccctataaatatatcaactttttgttttaatccctctaaaa |
24518548 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 29553198 - 29553140
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggtttaattcttctaaaa |
82 |
Q |
| |
|
||||||||||| ||||||| ||||||||| |||| |||| | |||||||||||||||| |
|
|
| T |
29553198 |
gttaaatatgtttttgatctctataaatatgttaattttttgttttaattcttctaaaa |
29553140 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 32457232 - 32457174
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggtttaattcttctaaaa |
82 |
Q |
| |
|
||||||||||| |||| |||||||||||||| ||||||||| |||| ||| ||||||| |
|
|
| T |
32457232 |
gttaaatatgtttttggtccttataaatatactaacttttcattttagttcctctaaaa |
32457174 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 70
Target Start/End: Complemental strand, 40367182 - 40367136
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggttta |
70 |
Q |
| |
|
||||||||||| |||| ||| ||||||||||||||||||||| |||| |
|
|
| T |
40367182 |
gttaaatatgtttttggtccatataaatatattaacttttcgtttta |
40367136 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 82
Target Start/End: Complemental strand, 11290618 - 11290553
Alignment:
| Q |
17 |
ttttagtgttaaatatgtatttgatccttataaatatattaacttttcggtttaattcttctaaaa |
82 |
Q |
| |
|
|||||| ||||||||||| |||| ||| ||||||||| | ||||||||| |||||| | ||||||| |
|
|
| T |
11290618 |
ttttagggttaaatatgtttttggtccctataaatatgtcaacttttcgttttaatccctctaaaa |
11290553 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 65
Target Start/End: Complemental strand, 15076605 - 15076564
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcg |
65 |
Q |
| |
|
||||||||||| |||| ||||||||||||||| ||||||||| |
|
|
| T |
15076605 |
gttaaatatgtttttggtccttataaatatatcaacttttcg |
15076564 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 54
Target Start/End: Original strand, 18564269 - 18564306
Alignment:
| Q |
17 |
ttttagtgttaaatatgtatttgatccttataaatata |
54 |
Q |
| |
|
|||||| ||||||||||| ||||||||||||||||||| |
|
|
| T |
18564269 |
ttttagggttaaatatgtttttgatccttataaatata |
18564306 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 40366689 - 40366726
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaactt |
61 |
Q |
| |
|
||||||||||| |||| ||||||||||||||||||||| |
|
|
| T |
40366689 |
gttaaatatgtttttggtccttataaatatattaactt |
40366726 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 43301989 - 43301936
Alignment:
| Q |
17 |
ttttagtgttaaatatgtatttgatccttataaatatattaacttttcggttta |
70 |
Q |
| |
|
|||||| ||||||||||| |||| ||| ||||||||||| ||||||||| |||| |
|
|
| T |
43301989 |
ttttagggttaaatatgtttttggtccctataaatatatcaacttttcgtttta |
43301936 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 82
Target Start/End: Original strand, 4910931 - 4910983
Alignment:
| Q |
30 |
tatgtatttgatccttataaatatattaacttttcggtttaattcttctaaaa |
82 |
Q |
| |
|
||||| ||| |||| ||||||||||| |||||||| |||||||||||||||| |
|
|
| T |
4910931 |
tatgttttttatccctataaatatatcaacttttcattttaattcttctaaaa |
4910983 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 13752457 - 13752405
Alignment:
| Q |
18 |
tttagtgttaaatatgtatttgatccttataaatatattaacttttcggttta |
70 |
Q |
| |
|
||||| ||||||||||| |||| ||| |||||||||| |||||||||||||| |
|
|
| T |
13752457 |
tttagggttaaatatgtttttgttccctataaatataccaacttttcggttta |
13752405 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 15648617 - 15648561
Alignment:
| Q |
26 |
taaatatgtatttgatccttataaatatattaacttttcggtttaattcttctaaaa |
82 |
Q |
| |
|
||||||||||||||| | ||||||| ||||||||||||| ||||||| ||||||| |
|
|
| T |
15648617 |
taaatatgtatttgaatcctataaatgtattaacttttcgttttaatttctctaaaa |
15648561 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 24463746 - 24463710
Alignment:
| Q |
18 |
tttagtgttaaatatgtatttgatccttataaatata |
54 |
Q |
| |
|
||||| ||||||||||| ||||||||||||||||||| |
|
|
| T |
24463746 |
tttagggttaaatatgtttttgatccttataaatata |
24463710 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 38; Significance: 0.000000000001; HSPs: 8)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 767785 - 767842
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggtttaattcttctaaa |
81 |
Q |
| |
|
||||||||||| |||| ||||||||||||||||||||||||| |||||| | |||||| |
|
|
| T |
767785 |
gttaaatatgtttttggtccttataaatatattaacttttcgttttaatccctctaaa |
767842 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 7683987 - 7683936
Alignment:
| Q |
19 |
ttagtgttaaatatgtatttgatccttataaatatattaacttttcggttta |
70 |
Q |
| |
|
|||| ||||||||||| |||||||| ||||||||| ||||||||||| |||| |
|
|
| T |
7683987 |
ttagcgttaaatatgtttttgatccctataaatatgttaacttttcgtttta |
7683936 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 7575670 - 7575724
Alignment:
| Q |
16 |
tttttagtgttaaatatgtatttgatccttataaatatattaacttttcggttta |
70 |
Q |
| |
|
||||||| ||||||||||| |||| ||| |||||||||| |||||||||| |||| |
|
|
| T |
7575670 |
tttttagggttaaatatgtttttggtccctataaatatactaacttttcgtttta |
7575724 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 13691350 - 13691396
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggttta |
70 |
Q |
| |
|
||||||||| | |||||||||||||||||||| ||||||||| |||| |
|
|
| T |
13691350 |
gttaaatatatttttgatccttataaatatatcaacttttcgtttta |
13691396 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 19680945 - 19680888
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggtttaattcttctaaa |
81 |
Q |
| |
|
||||||||||| |||| ||| |||||||||| |||||||||| |||||| | |||||| |
|
|
| T |
19680945 |
gttaaatatgtttttggtccctataaatatactaacttttcgttttaatccctctaaa |
19680888 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 1336530 - 1336582
Alignment:
| Q |
18 |
tttagtgttaaatatgtatttgatccttataaatatattaacttttcggttta |
70 |
Q |
| |
|
||||| ||||||||||| |||| ||| ||||||||||| ||||||||| |||| |
|
|
| T |
1336530 |
tttagggttaaatatgtttttggtccctataaatatatcaacttttcgtttta |
1336582 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 17544861 - 17544929
Alignment:
| Q |
14 |
attttttagtgttaaatatgtatttgatccttataaatatattaacttttcggtttaattcttctaaaa |
82 |
Q |
| |
|
|||| |||| ||||||||||| |||||||| |||||||||| |||||||| |||| ||| ||||||| |
|
|
| T |
17544861 |
atttattagggttaaatatgtttttgatccctataaatataccaacttttcactttagttcctctaaaa |
17544929 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 33599936 - 33599884
Alignment:
| Q |
18 |
tttagtgttaaatatgtatttgatccttataaatatattaacttttcggttta |
70 |
Q |
| |
|
||||| ||||||||||| |||||||| |||||||||| ||||||||| |||| |
|
|
| T |
33599936 |
tttagggttaaatatgtttttgatccctataaatataccaacttttcgtttta |
33599884 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 38; Significance: 0.000000000001; HSPs: 16)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 80
Target Start/End: Complemental strand, 35683798 - 35683742
Alignment:
| Q |
23 |
tgttaaatatgtatttgatccttataaatatattaacttttcggtttaattcttctaa |
80 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||| |
|
|
| T |
35683798 |
tgttaaatatgt-tttgatccttataaatatattaacttttcattttaatttttctaa |
35683742 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 34373620 - 34373575
Alignment:
| Q |
18 |
tttagtgttaaatatgtatttgatccttataaatatattaactttt |
63 |
Q |
| |
|
||||| ||||||||||| |||||||| ||||||||||||||||||| |
|
|
| T |
34373620 |
tttagggttaaatatgtttttgatccctataaatatattaactttt |
34373575 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 82
Target Start/End: Original strand, 26487781 - 26487848
Alignment:
| Q |
15 |
ttttttagtgttaaatatgtatttgatccttataaatatattaacttttcggtttaattcttctaaaa |
82 |
Q |
| |
|
|||| ||| ||||||||||| |||| ||| ||||||||||| |||||||| |||||| ||||||||| |
|
|
| T |
26487781 |
ttttatagggttaaatatgtttttggtccctataaatatatcaacttttcattttaatccttctaaaa |
26487848 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 29772047 - 29771992
Alignment:
| Q |
15 |
ttttttagtgttaaatatgtatttgatccttataaatatattaacttttcggttta |
70 |
Q |
| |
|
|||||||| ||||||||||| |||| ||| ||||||||||| ||||||||| |||| |
|
|
| T |
29772047 |
ttttttagggttaaatatgtttttggtccctataaatatatcaacttttcgtttta |
29771992 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 39911100 - 39911041
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggtttaattcttctaaaac |
83 |
Q |
| |
|
||||||||||| |||| ||| |||||||||| |||||||||| |||| ||| |||||||| |
|
|
| T |
39911100 |
gttaaatatgtttttggtccctataaatatactaacttttcgttttagttcctctaaaac |
39911041 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 29965336 - 29965278
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggtttaattcttctaaaa |
82 |
Q |
| |
|
||||||||||| |||| ||| ||||||||||| ||||||||| |||| ||| ||||||| |
|
|
| T |
29965336 |
gttaaatatgtttttggtccctataaatatatcaacttttcgttttagttcctctaaaa |
29965278 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 36703907 - 36703849
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggtttaattcttctaaaa |
82 |
Q |
| |
|
||||||||||| |||| ||| ||||||||||| ||||||||| |||| | ||||||||| |
|
|
| T |
36703907 |
gttaaatatgtttttggtccctataaatatatcaacttttcgttttagtccttctaaaa |
36703849 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 82
Target Start/End: Complemental strand, 353690 - 353649
Alignment:
| Q |
41 |
tccttataaatatattaacttttcggtttaattcttctaaaa |
82 |
Q |
| |
|
||||||||||||||||||||||||| |||| ||| ||||||| |
|
|
| T |
353690 |
tccttataaatatattaacttttcgttttagttcctctaaaa |
353649 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 1309803 - 1309755
Alignment:
| Q |
14 |
attttttagtgttaaatatgtatttgatccttataaatatattaactttt |
63 |
Q |
| |
|
||||||||| ||||||||||| |||| ||||||||||||||| ||||||| |
|
|
| T |
1309803 |
attttttag-gttaaatatgtttttggtccttataaatatatcaactttt |
1309755 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 82
Target Start/End: Original strand, 19037384 - 19037449
Alignment:
| Q |
17 |
ttttagtgttaaatatgtatttgatccttataaatatattaacttttcggtttaattcttctaaaa |
82 |
Q |
| |
|
|||||| ||||||||||| |||||||| ||||||||| | |||||||| |||| | ||||||||| |
|
|
| T |
19037384 |
ttttagggttaaatatgtttttgatccctataaatatgtcaacttttcattttagtccttctaaaa |
19037449 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 19689444 - 19689497
Alignment:
| Q |
17 |
ttttagtgttaaatatgtatttgatccttataaatatattaacttttcggttta |
70 |
Q |
| |
|
|||||| ||||||||||| |||| ||| ||||||||||| ||||||||| |||| |
|
|
| T |
19689444 |
ttttagggttaaatatgtttttggtccctataaatatatcaacttttcgtttta |
19689497 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 30031982 - 30031925
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggtttaattcttctaaa |
81 |
Q |
| |
|
||||||||||| |||| ||| |||||||||| |||||||||| |||||| | |||||| |
|
|
| T |
30031982 |
gttaaatatgtttttggtccctataaatatactaacttttcgttttaatccctctaaa |
30031925 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 65
Target Start/End: Original strand, 43067232 - 43067273
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcg |
65 |
Q |
| |
|
||||||||||| |||| ||||||||||||||| ||||||||| |
|
|
| T |
43067232 |
gttaaatatgtttttggtccttataaatatataaacttttcg |
43067273 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 3460301 - 3460341
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttc |
64 |
Q |
| |
|
||||| ||||| ||| ||||||||||||||||||||||||| |
|
|
| T |
3460301 |
gttaattatgttttttatccttataaatatattaacttttc |
3460341 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 5497151 - 5497111
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttc |
64 |
Q |
| |
|
||||||||||| |||||||| ||||||||||| |||||||| |
|
|
| T |
5497151 |
gttaaatatgtttttgatccctataaatatatcaacttttc |
5497111 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 9369950 - 9370002
Alignment:
| Q |
18 |
tttagtgttaaatatgtatttgatccttataaatatattaacttttcggttta |
70 |
Q |
| |
|
||||| ||||||||||| ||| |||| ||||||||||| ||||||||| |||| |
|
|
| T |
9369950 |
tttagggttaaatatgtttttaatccctataaatatatcaacttttcgtttta |
9370002 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 35; Significance: 0.00000000008; HSPs: 33)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 30577729 - 30577671
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggtttaattcttctaaaa |
82 |
Q |
| |
|
||||||||||| ||||||| ||||||||||| ||||||||| |||||||| ||||||| |
|
|
| T |
30577729 |
gttaaatatgtttttgatctctataaatatatcaacttttcgttttaattcctctaaaa |
30577671 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 35460073 - 35460131
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggtttaattcttctaaaa |
82 |
Q |
| |
|
||||||||||| || ||||||||||||||||| ||| ||| | |||||||||||||||| |
|
|
| T |
35460073 |
gttaaatatgttttggatccttataaatatatcaaccttttgttttaattcttctaaaa |
35460131 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 43887214 - 43887156
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggtttaattcttctaaaa |
82 |
Q |
| |
|
||||||||||| ||||||||||||||||||| ||||||| | |||||||| ||||||| |
|
|
| T |
43887214 |
gttaaatatgtttttgatccttataaatataccaactttttgttttaattcctctaaaa |
43887156 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 19158849 - 19158901
Alignment:
| Q |
18 |
tttagtgttaaatatgtatttgatccttataaatatattaacttttcggttta |
70 |
Q |
| |
|
||||| ||||||||||| |||||||| ||||||||||| ||||||||| |||| |
|
|
| T |
19158849 |
tttagggttaaatatgtttttgatccctataaatatatcaacttttcgtttta |
19158901 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 34330765 - 34330821
Alignment:
| Q |
18 |
tttagtgttaaatatgtatttgatccttataaatatattaacttttcggtttaattc |
74 |
Q |
| |
|
||||| ||||||||||| |||| |||||||||||||| ||||||||| |||||||| |
|
|
| T |
34330765 |
tttagggttaaatatgtttttgttccttataaatatacaaacttttcgttttaattc |
34330821 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 72
Target Start/End: Original strand, 46887777 - 46887825
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggtttaat |
72 |
Q |
| |
|
||||||||| | |||||||||||||||||||| ||||||||| |||||| |
|
|
| T |
46887777 |
gttaaatatatttttgatccttataaatatatcaacttttcgttttaat |
46887825 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 43081641 - 43081586
Alignment:
| Q |
15 |
ttttttagtgttaaatatgtatttgatccttataaatatattaacttttcggttta |
70 |
Q |
| |
|
|||||||| ||||||||||| |||| |||||||||||||| ||||||||| |||| |
|
|
| T |
43081641 |
ttttttagggttaaatatgtttttggtccttataaatataccaacttttcgtttta |
43081586 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 47742719 - 47742774
Alignment:
| Q |
15 |
ttttttagtgttaaatatgtatttgatccttataaatatattaacttttcggttta |
70 |
Q |
| |
|
|||||||| ||||||||||| ||||||| ||||||||||| ||||||||| |||| |
|
|
| T |
47742719 |
ttttttagggttaaatatgtttttgatctttataaatataccaacttttcgtttta |
47742774 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 71
Target Start/End: Complemental strand, 49839179 - 49839132
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggtttaa |
71 |
Q |
| |
|
||||||||||| ||||||||||||||||||| ||||||||| ||||| |
|
|
| T |
49839179 |
gttaaatatgtttttgatccttataaatataccaacttttcgttttaa |
49839132 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 161022 - 160964
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggtttaattcttctaaaa |
82 |
Q |
| |
|
||||||||||| ||||||| ||||||||| |||| |||||| |||||||| ||||||| |
|
|
| T |
161022 |
gttaaatatgtttttgatctctataaatatgttaaattttcgttttaattcctctaaaa |
160964 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 7923292 - 7923246
Alignment:
| Q |
18 |
tttagtgttaaatatgtatttgatccttataaatatattaacttttc |
64 |
Q |
| |
|
||||| ||||||||||| |||||||||||||||||||| || ||||| |
|
|
| T |
7923292 |
tttagggttaaatatgtttttgatccttataaatatatcaatttttc |
7923246 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 17380275 - 17380321
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggttta |
70 |
Q |
| |
|
||||||||||| |||||||| ||||||||||| ||||||||| |||| |
|
|
| T |
17380275 |
gttaaatatgtttttgatccctataaatatatcaacttttcgtttta |
17380321 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 17551999 - 17551941
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggtttaattcttctaaaa |
82 |
Q |
| |
|
||||||||||| |||| ||| |||||||||| ||||||||| |||||||| ||||||| |
|
|
| T |
17551999 |
gttaaatatgtttttgctccctataaatatacaaacttttcgttttaattcctctaaaa |
17551941 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 70
Target Start/End: Complemental strand, 19114111 - 19114065
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggttta |
70 |
Q |
| |
|
||||||||||| |||| ||||||||||||||| ||||||||| |||| |
|
|
| T |
19114111 |
gttaaatatgtttttggtccttataaatatatcaacttttcgtttta |
19114065 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 28588939 - 28588881
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggtttaattcttctaaaa |
82 |
Q |
| |
|
||||||||||| |||| ||| ||||||||||| ||||||||| |||| ||| ||||||| |
|
|
| T |
28588939 |
gttaaatatgtttttggtccctataaatatatcaacttttcgttttagttcctctaaaa |
28588881 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 70
Target Start/End: Complemental strand, 29458858 - 29458812
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggttta |
70 |
Q |
| |
|
||||||||||| ||||||||||||||||||| ||||||||| |||| |
|
|
| T |
29458858 |
gttaaatatgtttttgatccttataaatataccaacttttcgtttta |
29458812 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 31310895 - 31310941
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggttta |
70 |
Q |
| |
|
||||||||||| ||||||||||||||||||| ||||||||| |||| |
|
|
| T |
31310895 |
gttaaatatgtttttgatccttataaatatacaaacttttcgtttta |
31310941 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 33463275 - 33463321
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggttta |
70 |
Q |
| |
|
|||||||||||||||||||| |||||||||| ||||||||| |||| |
|
|
| T |
33463275 |
gttaaatatgtatttgatccctataaatatacaaacttttcgtttta |
33463321 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 33805960 - 33806006
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggttta |
70 |
Q |
| |
|
||||||||||| |||||||| ||||||||||| ||||||||| |||| |
|
|
| T |
33805960 |
gttaaatatgtttttgatccctataaatatatcaacttttcgtttta |
33806006 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 36181385 - 36181443
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggtttaattcttctaaaa |
82 |
Q |
| |
|
||||||||||| |||| ||| ||||||||| | ||||||||| |||||||| ||||||| |
|
|
| T |
36181385 |
gttaaatatgtttttggtccctataaatatgtcaacttttcgttttaattcctctaaaa |
36181443 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 49083815 - 49083757
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggtttaattcttctaaaa |
82 |
Q |
| |
|
||||||||||| |||| ||| ||||||||||||||||||||| || | | ||||||||| |
|
|
| T |
49083815 |
gttaaatatgtttttggtccctataaatatattaacttttcgtttcagtccttctaaaa |
49083757 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 52169607 - 52169549
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggtttaattcttctaaaa |
82 |
Q |
| |
|
||||||||| | |||| ||| ||||||||||| ||||||||| |||| ||||||||||| |
|
|
| T |
52169607 |
gttaaatatatttttggtccctataaatatatcaacttttcgttttagttcttctaaaa |
52169549 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 52253119 - 52253061
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggtttaattcttctaaaa |
82 |
Q |
| |
|
||||||||||| |||| ||| ||||||||||| ||||||||| |||| ||| ||||||| |
|
|
| T |
52253119 |
gttaaatatgtttttggtccctataaatatataaacttttcgttttagttcctctaaaa |
52253061 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 53277070 - 53277116
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggttta |
70 |
Q |
| |
|
||||||||||| ||| |||| ||||||||||||||||||||| |||| |
|
|
| T |
53277070 |
gttaaatatgtttttaatccctataaatatattaacttttcgtttta |
53277116 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 51335826 - 51335769
Alignment:
| Q |
25 |
ttaaatatgtatttgatccttataaatatattaacttttcggtttaattcttctaaaa |
82 |
Q |
| |
|
|||||||||| |||| |||||||||||||| ||||||||| |||||| | ||||||| |
|
|
| T |
51335826 |
ttaaatatgtttttggtccttataaatataccaacttttcgttttaatccctctaaaa |
51335769 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 82
Target Start/End: Complemental strand, 52336938 - 52336874
Alignment:
| Q |
17 |
ttttagtgttaaatatgtatttgatccttataaatatattaacttttcggtttaattcttctaaaa |
82 |
Q |
| |
|
|||||| ||||||||||| ||| ||||||| || |||| ||||||||||||||| |||||||||| |
|
|
| T |
52336938 |
ttttagggttaaatatgttttttatccttacaagtatacaaacttttcggtttaa-tcttctaaaa |
52336874 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 6134599 - 6134635
Alignment:
| Q |
17 |
ttttagtgttaaatatgtatttgatccttataaatat |
53 |
Q |
| |
|
|||||| ||||||||||| |||||||||||||||||| |
|
|
| T |
6134599 |
ttttagggttaaatatgtttttgatccttataaatat |
6134635 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 23804064 - 23804012
Alignment:
| Q |
18 |
tttagtgttaaatatgtatttgatccttataaatatattaacttttcggttta |
70 |
Q |
| |
|
||||||||||||||||| |||| ||| |||||||||| ||||||||| |||| |
|
|
| T |
23804064 |
tttagtgttaaatatgtttttggtccctataaatatacaaacttttcgtttta |
23804012 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 26859815 - 26859767
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggtttaat |
72 |
Q |
| |
|
||||||||||| |||| ||| ||||||||||| ||||||||| |||||| |
|
|
| T |
26859815 |
gttaaatatgtttttggtccctataaatatatcaacttttcgttttaat |
26859767 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 46710225 - 46710281
Alignment:
| Q |
14 |
attttttagtgttaaatatgtatttgatccttataaatatattaacttttcggttta |
70 |
Q |
| |
|
|||||| || ||||||||||| |||| ||| ||||||||| | |||||||||||||| |
|
|
| T |
46710225 |
atttttaagggttaaatatgtttttggtccctataaatatgtcaacttttcggttta |
46710281 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 72
Target Start/End: Original strand, 46835642 - 46835690
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggtttaat |
72 |
Q |
| |
|
||||||||||| ||||||||||||||||||| ||||||| | |||||| |
|
|
| T |
46835642 |
gttaaatatgtttttgatccttataaatataccaactttttgttttaat |
46835690 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 48380995 - 48381059
Alignment:
| Q |
18 |
tttagtgttaaatatgtatttgatccttataaatatattaacttttcggtttaattcttctaaaa |
82 |
Q |
| |
|
|||| |||||||||||| |||| ||||||||||||||| || ||||| |||||| | ||||||| |
|
|
| T |
48380995 |
tttaatgttaaatatgtttttggtccttataaatatatcaatttttcattttaatccctctaaaa |
48381059 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 64
Target Start/End: Original strand, 55320017 - 55320061
Alignment:
| Q |
21 |
agtgttaaatatgtatttgatccttat-aaatatattaacttttc |
64 |
Q |
| |
|
|||||||||||||| |||||| ||||| ||||||||||||||||| |
|
|
| T |
55320017 |
agtgttaaatatgtttttgattcttataaaatatattaacttttc |
55320061 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 35; Significance: 0.00000000008; HSPs: 22)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 14422623 - 14422681
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggtttaattcttctaaaa |
82 |
Q |
| |
|
||||||||||| |||||||| ||||||||||| ||||||||| |||| | ||||||||| |
|
|
| T |
14422623 |
gttaaatatgtttttgatccctataaatatatcaacttttcgttttagtccttctaaaa |
14422681 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 31275740 - 31275798
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggtttaattcttctaaaa |
82 |
Q |
| |
|
||||||||||| |||| ||| |||||||||||||| |||||| |||||||| ||||||| |
|
|
| T |
31275740 |
gttaaatatgtttttgttccctataaatatattaagttttcgttttaattcctctaaaa |
31275798 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 82
Target Start/End: Original strand, 9593260 - 9593325
Alignment:
| Q |
17 |
ttttagtgttaaatatgtatttgatccttataaatatattaacttttcggtttaattcttctaaaa |
82 |
Q |
| |
|
|||||| ||||||||||| |||| ||| ||||||||| ||||||||||| |||| ||| ||||||| |
|
|
| T |
9593260 |
ttttagggttaaatatgtttttgctccctataaatatgttaacttttcgttttagttcctctaaaa |
9593325 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 36042318 - 36042382
Alignment:
| Q |
18 |
tttagtgttaaatatgtatttgatccttataaatatattaacttttcggtttaattcttctaaaa |
82 |
Q |
| |
|
||||| ||||||||||| |||||||| ||||||||| | ||||||||| |||| | ||||||||| |
|
|
| T |
36042318 |
tttagggttaaatatgtttttgatccctataaatatgtcaacttttcgttttagtccttctaaaa |
36042382 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 37848205 - 37848157
Alignment:
| Q |
15 |
ttttttagtgttaaatatgtatttgatccttataaatatattaactttt |
63 |
Q |
| |
|
|||||||| ||||||||||| |||||||||||||||||| | ||||||| |
|
|
| T |
37848205 |
ttttttagggttaaatatgtttttgatccttataaatatgtcaactttt |
37848157 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 2969677 - 2969732
Alignment:
| Q |
15 |
ttttttagtgttaaatatgtatttgatccttataaatatattaacttttcggttta |
70 |
Q |
| |
|
|||||||| ||||||||||| |||| ||| ||||||||||| ||||||||| |||| |
|
|
| T |
2969677 |
ttttttagggttaaatatgtttttggtccctataaatatatcaacttttcgtttta |
2969732 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 70
Target Start/End: Complemental strand, 4051492 - 4051446
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggttta |
70 |
Q |
| |
|
||||||||||| |||| |||||||||||||| |||||||||| |||| |
|
|
| T |
4051492 |
gttaaatatgtttttggtccttataaatatactaacttttcgtttta |
4051446 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 17337971 - 17338017
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggttta |
70 |
Q |
| |
|
||||||||||| |||| ||||||||||||||| ||||||||| |||| |
|
|
| T |
17337971 |
gttaaatatgtttttggtccttataaatatatcaacttttcgtttta |
17338017 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 18104307 - 18104353
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggttta |
70 |
Q |
| |
|
||||||||||| |||| ||| ||||||||| |||||||||||||||| |
|
|
| T |
18104307 |
gttaaatatgtttttggtccctataaatatgttaacttttcggttta |
18104353 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 35864314 - 35864360
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggttta |
70 |
Q |
| |
|
||||||||||| |||||||| ||||||||||| ||||||||| |||| |
|
|
| T |
35864314 |
gttaaatatgtttttgatccctataaatatatcaacttttcgtttta |
35864360 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 41885557 - 41885499
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggtttaattcttctaaaa |
82 |
Q |
| |
|
||||||||||| |||| ||| |||||||||| |||||||||| |||| ||| ||||||| |
|
|
| T |
41885557 |
gttaaatatgtttttggtccctataaatatactaacttttcgttttagttcctctaaaa |
41885499 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 70
Target Start/End: Original strand, 1053297 - 1053342
Alignment:
| Q |
25 |
ttaaatatgtatttgatccttataaatatattaacttttcggttta |
70 |
Q |
| |
|
|||||||||| |||| |||||||||||||| |||||||||| |||| |
|
|
| T |
1053297 |
ttaaatatgtttttggtccttataaatatactaacttttcgtttta |
1053342 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 26821284 - 26821227
Alignment:
| Q |
25 |
ttaaatatgtatttgatccttataaatatattaacttttcggtttaattcttctaaaa |
82 |
Q |
| |
|
|||||||||| |||| |||||||||||||| ||||||||| |||| ||| ||||||| |
|
|
| T |
26821284 |
ttaaatatgtttttggtccttataaatatacaaacttttcgttttagttcctctaaaa |
26821227 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 82
Target Start/End: Original strand, 27640974 - 27641039
Alignment:
| Q |
17 |
ttttagtgttaaatatgtatttgatccttataaatatattaacttttcggtttaattcttctaaaa |
82 |
Q |
| |
|
|||||| ||||||||| | |||||||| ||||||||||| ||||||| | |||||| | ||||||| |
|
|
| T |
27640974 |
ttttagggttaaatatatttttgatccctataaatatatcaactttttgttttaatccctctaaaa |
27641039 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 35259634 - 35259581
Alignment:
| Q |
17 |
ttttagtgttaaatatgtatttgatccttataaatatattaacttttcggttta |
70 |
Q |
| |
|
|||||| ||||||||| | |||| ||||||||||||| | |||||||||||||| |
|
|
| T |
35259634 |
ttttagggttaaatatttttttggtccttataaatatgtcaacttttcggttta |
35259581 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 53
Target Start/End: Complemental strand, 42101619 - 42101590
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatat |
53 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
42101619 |
gttaaatatgtatttgatccttataaatat |
42101590 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 4618140 - 4618204
Alignment:
| Q |
18 |
tttagtgttaaatatgtatttgatccttataaatatattaacttttcggtttaattcttctaaaa |
82 |
Q |
| |
|
||||| ||||||||||| |||| ||| |||||||||| ||||||||| |||| | ||||||||| |
|
|
| T |
4618140 |
tttagggttaaatatgtttttgctccctataaatatacaaacttttcgttttagtccttctaaaa |
4618204 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 33417986 - 33417942
Alignment:
| Q |
26 |
taaatatgtatttgatccttataaatatattaacttttcggttta |
70 |
Q |
| |
|
||||||||| |||||||||||||||||| |||||||||| |||| |
|
|
| T |
33417986 |
taaatatgtttttgatccttataaatatgctaacttttcgtttta |
33417942 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 34941619 - 34941571
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggtttaat |
72 |
Q |
| |
|
||||||||||| ||||||| |||||||||||||| |||||| |||||| |
|
|
| T |
34941619 |
gttaaatatgtttttgatctctataaatatattaaattttcgttttaat |
34941571 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 38163361 - 38163413
Alignment:
| Q |
18 |
tttagtgttaaatatgtatttgatccttataaatatattaacttttcggttta |
70 |
Q |
| |
|
||||| ||||||||||| |||| ||| ||||||||||| ||||||||| |||| |
|
|
| T |
38163361 |
tttagggttaaatatgtttttggtccctataaatatatcaacttttcgtttta |
38163413 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 47843875 - 47843927
Alignment:
| Q |
18 |
tttagtgttaaatatgtatttgatccttataaatatattaacttttcggttta |
70 |
Q |
| |
|
||||| ||||||||||| |||| ||| ||||||||||| ||||||||| |||| |
|
|
| T |
47843875 |
tttagggttaaatatgtttttggtccctataaatatatcaacttttcgtttta |
47843927 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 51680856 - 51680896
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttc |
64 |
Q |
| |
|
||||||||||| ||||||||||||||||||| |||||||| |
|
|
| T |
51680856 |
gttaaatatgtttttgatccttataaatataccaacttttc |
51680896 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 34; Significance: 0.0000000003; HSPs: 17)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 70
Target Start/End: Original strand, 19103895 - 19103944
Alignment:
| Q |
21 |
agtgttaaatatgtatttgatccttataaatatattaacttttcggttta |
70 |
Q |
| |
|
|||||||||||||| |||||||| ||||||||||| ||||||||| |||| |
|
|
| T |
19103895 |
agtgttaaatatgtttttgatccctataaatatatcaacttttcgtttta |
19103944 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 39025659 - 39025728
Alignment:
| Q |
13 |
aattttttagtgttaaatatgtatttgatccttataaatatattaacttttcggtttaattcttctaaaa |
82 |
Q |
| |
|
|||||||||| ||||||||||| |||| ||||||||||||| ||||||||| |||||| | ||||||| |
|
|
| T |
39025659 |
aattttttagggttaaatatgtttttggtccttataaatatgccaacttttcgttttaatccctctaaaa |
39025728 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 12331120 - 12331175
Alignment:
| Q |
15 |
ttttttagtgttaaatatgtatttgatccttataaatatattaacttttcggttta |
70 |
Q |
| |
|
|||||||| ||||||||||| |||| ||| ||||||||| ||||||||||| |||| |
|
|
| T |
12331120 |
ttttttagggttaaatatgtttttggtccctataaatatgttaacttttcgtttta |
12331175 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 3637513 - 3637455
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggtttaattcttctaaaa |
82 |
Q |
| |
|
||||||||||| |||| |||||||||||||| ||||||||| |||| ||| ||||||| |
|
|
| T |
3637513 |
gttaaatatgtttttggtccttataaatataccaacttttcgttttagttcctctaaaa |
3637455 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 5244295 - 5244352
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggtttaattcttctaaaa |
82 |
Q |
| |
|
||||||||||| |||| || |||||||||||||||||||||| |||| ||| ||||||| |
|
|
| T |
5244295 |
gttaaatatgtttttggtc-ttataaatatattaacttttcgttttagttcctctaaaa |
5244352 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 11374973 - 11375019
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggttta |
70 |
Q |
| |
|
||||||||||| |||||||| ||||||||| ||||||||||| |||| |
|
|
| T |
11374973 |
gttaaatatgtttttgatccctataaatatgttaacttttcgtttta |
11375019 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 11690797 - 11690739
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggtttaattcttctaaaa |
82 |
Q |
| |
|
||||||||||| ||||| || ||||||||| | || |||||| |||||||||||||||| |
|
|
| T |
11690797 |
gttaaatatgtttttgacccctataaatatgtcaatttttcgttttaattcttctaaaa |
11690739 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 42661347 - 42661393
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggttta |
70 |
Q |
| |
|
||||||||||| |||||||| ||||||||||| ||||||||| |||| |
|
|
| T |
42661347 |
gttaaatatgtttttgatccctataaatatatcaacttttcgtttta |
42661393 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 64
Target Start/End: Complemental strand, 4001011 - 4000962
Alignment:
| Q |
15 |
ttttttagtgttaaatatgtatttgatccttataaatatattaacttttc |
64 |
Q |
| |
|
|||||||| ||||||||||| |||| ||| ||||||||||| |||||||| |
|
|
| T |
4001011 |
ttttttagggttaaatatgtttttggtccctataaatatatcaacttttc |
4000962 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 14523644 - 14523587
Alignment:
| Q |
25 |
ttaaatatgtatttgatccttataaatatattaacttttcggtttaattcttctaaaa |
82 |
Q |
| |
|
|||||||||| |||| |||||||||||||| ||||||||| |||||| | ||||||| |
|
|
| T |
14523644 |
ttaaatatgtttttgctccttataaatatacaaacttttcgttttaatccctctaaaa |
14523587 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 26910448 - 26910501
Alignment:
| Q |
17 |
ttttagtgttaaatatgtatttgatccttataaatatattaacttttcggttta |
70 |
Q |
| |
|
|||||| ||||||||||| |||| ||| ||||||||||| ||||||||| |||| |
|
|
| T |
26910448 |
ttttagggttaaatatgtttttggtccctataaatatatcaacttttcgtttta |
26910501 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 82
Target Start/End: Original strand, 34448488 - 34448553
Alignment:
| Q |
17 |
ttttagtgttaaatatgtatttgatccttataaatatattaacttttcggtttaattcttctaaaa |
82 |
Q |
| |
|
|||||| ||||||||||| ||| ||||||||||||||| ||||||| | |||| | ||||||||| |
|
|
| T |
34448488 |
ttttagggttaaatatgtttttagtccttataaatatatcaactttttgttttagtccttctaaaa |
34448553 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 16218431 - 16218471
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttc |
64 |
Q |
| |
|
||||||||||| |||| |||||||||| ||||||||||||| |
|
|
| T |
16218431 |
gttaaatatgtttttggtccttataaaaatattaacttttc |
16218471 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 26020348 - 26020292
Alignment:
| Q |
14 |
attttttagtgttaaatatgtatttgatccttataaatatattaacttttcggttta |
70 |
Q |
| |
|
||||||||| ||||||||||| |||| ||| ||||||||||| || |||||| |||| |
|
|
| T |
26020348 |
attttttagggttaaatatgtttttggtccctataaatatatcaatttttcgtttta |
26020292 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 28137371 - 28137423
Alignment:
| Q |
18 |
tttagtgttaaatatgtatttgatccttataaatatattaacttttcggttta |
70 |
Q |
| |
|
||||| ||||||||||| |||| ||| ||||||||||| ||||||||| |||| |
|
|
| T |
28137371 |
tttagggttaaatatgtttttggtccctataaatatatcaacttttcgtttta |
28137423 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 30896202 - 30896258
Alignment:
| Q |
14 |
attttttagtgttaaatatgtatttgatccttataaatatattaacttttcggttta |
70 |
Q |
| |
|
||||||||| |||||||||| |||| |||||||||||||| ||||||||| |||| |
|
|
| T |
30896202 |
attttttagaattaaatatgtttttggtccttataaatatacaaacttttcgtttta |
30896258 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 34598151 - 34598191
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttc |
64 |
Q |
| |
|
||||||||||| |||| ||||||||||||||| |||||||| |
|
|
| T |
34598151 |
gttaaatatgtttttggtccttataaatatatcaacttttc |
34598191 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0011 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0011
Description:
Target: scaffold0011; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 225172 - 225117
Alignment:
| Q |
15 |
ttttttagtgttaaatatgtatttgatccttataaatatattaacttttcggttta |
70 |
Q |
| |
|
|||||| | ||||||||||| |||| ||||||||||||||| ||||||||| |||| |
|
|
| T |
225172 |
tttttttgggttaaatatgtttttggtccttataaatatatcaacttttcgtttta |
225117 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0508 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0508
Description:
Target: scaffold0508; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 70
Target Start/End: Complemental strand, 6769 - 6723
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttcggttta |
70 |
Q |
| |
|
||||||||||| |||| ||||||||||||||| ||||||||| |||| |
|
|
| T |
6769 |
gttaaatatgtttttggtccttataaatatatcaacttttcgtttta |
6723 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0147 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0147
Description:
Target: scaffold0147; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 39799 - 39839
Alignment:
| Q |
24 |
gttaaatatgtatttgatccttataaatatattaacttttc |
64 |
Q |
| |
|
||||| ||||| ||| ||||||||||||||||||||||||| |
|
|
| T |
39799 |
gttaattatgttttttatccttataaatatattaacttttc |
39839 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0022 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0022
Description:
Target: scaffold0022; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 65376 - 65320
Alignment:
| Q |
14 |
attttttagtgttaaatatgtatttgatccttataaatatattaacttttcggttta |
70 |
Q |
| |
|
||||||||| ||||||||||| |||| ||| ||||||||| | ||||||||| |||| |
|
|
| T |
65376 |
attttttagggttaaatatgtttttggtccctataaatatgtcaacttttcgtttta |
65320 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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