View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4115_high_3 (Length: 649)

Name: NF4115_high_3
Description: NF4115
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4115_high_3
NF4115_high_3
[»] chr3 (64 HSPs)
chr3 (362-602)||(47979833-47980074)
chr3 (373-549)||(50716354-50716529)
chr3 (373-549)||(50796318-50796493)
chr3 (372-466)||(38977712-38977806)
chr3 (372-466)||(51258504-51258599)
chr3 (372-466)||(3352030-3352124)
chr3 (373-549)||(35142176-35142350)
chr3 (373-549)||(28873107-28873282)
chr3 (372-463)||(43472936-43473027)
chr3 (381-550)||(47123136-47123303)
chr3 (373-466)||(33438623-33438716)
chr3 (381-550)||(47130502-47130669)
chr3 (373-466)||(501105-501198)
chr3 (373-466)||(3902770-3902863)
chr3 (372-466)||(49096190-49096285)
chr3 (373-463)||(2358589-2358679)
chr3 (373-459)||(34821314-34821400)
chr3 (373-466)||(47739896-47739989)
chr3 (373-466)||(51540578-51540671)
chr3 (406-549)||(35345792-35345933)
chr3 (374-466)||(39149912-39150004)
chr3 (373-461)||(45712053-45712141)
chr3 (372-450)||(27143396-27143474)
chr3 (373-454)||(3937481-3937562)
chr3 (373-549)||(47302122-47302294)
chr3 (373-497)||(47769364-47769486)
chr3 (372-541)||(29035899-29036067)
chr3 (373-546)||(40062481-40062652)
chr3 (377-549)||(51492905-51493076)
chr3 (373-463)||(52777333-52777423)
chr3 (394-451)||(8735309-8735366)
chr3 (394-451)||(9087550-9087607)
chr3 (373-465)||(26053485-26053578)
chr3 (373-549)||(46622678-46622841)
chr3 (373-549)||(54229780-54229954)
chr3 (374-454)||(5127875-5127955)
chr3 (373-464)||(512214-512305)
chr3 (418-552)||(46624867-46624999)
chr3 (392-466)||(8735514-8735588)
chr3 (392-466)||(9087755-9087829)
chr3 (373-549)||(14828801-14828976)
chr3 (206-362)||(29048258-29048417)
chr3 (376-466)||(46555445-46555535)
chr3 (395-454)||(45244514-45244573)
chr3 (256-354)||(43472332-43472430)
chr3 (401-466)||(33842038-33842103)
chr3 (373-450)||(43420110-43420187)
chr3 (214-330)||(5128022-5128138)
chr3 (373-441)||(29035816-29035884)
chr3 (322-362)||(47980091-47980131)
chr3 (373-463)||(30721777-30721861)
chr3 (479-546)||(40062258-40062325)
chr3 (205-291)||(4300437-4300523)
chr3 (373-463)||(29048445-29048534)
chr3 (373-463)||(34010056-34010146)
chr3 (476-549)||(50384358-50384432)
chr3 (401-454)||(45244729-45244782)
chr3 (514-549)||(4394220-4394255)
chr3 (205-362)||(11266186-11266342)
chr3 (287-362)||(51816244-51816319)
chr3 (476-546)||(51816417-51816487)
chr3 (325-362)||(32025021-32025058)
chr3 (506-550)||(33439413-33439458)
chr3 (394-454)||(32025111-32025171)
[»] chr7 (49 HSPs)
chr7 (372-570)||(48776071-48776269)
chr7 (373-497)||(48775712-48775834)
chr7 (373-549)||(42925523-42925698)
chr7 (373-466)||(9151898-9151991)
chr7 (373-466)||(28230432-28230525)
chr7 (373-466)||(31985481-31985574)
chr7 (373-466)||(42865066-42865159)
chr7 (372-549)||(36408472-36408647)
chr7 (372-549)||(36468420-36468595)
chr7 (373-463)||(5278366-5278456)
chr7 (373-466)||(24042152-24042245)
chr7 (362-466)||(3936199-3936303)
chr7 (373-466)||(1518809-1518902)
chr7 (373-463)||(3304725-3304815)
chr7 (376-466)||(43185887-43185977)
chr7 (373-463)||(47202596-47202686)
chr7 (373-466)||(24690298-24690391)
chr7 (373-549)||(36946175-36946348)
chr7 (373-466)||(37518259-37518352)
chr7 (372-463)||(33574010-33574101)
chr7 (256-360)||(5278226-5278336)
chr7 (373-466)||(36629307-36629398)
chr7 (373-466)||(19225562-19225655)
chr7 (386-466)||(8214254-8214334)
chr7 (373-464)||(6467106-6467197)
chr7 (379-466)||(8214465-8214552)
chr7 (373-463)||(31643143-31643233)
chr7 (401-454)||(5731161-5731214)
chr7 (373-549)||(7115153-7115327)
chr7 (385-466)||(19818494-19818575)
chr7 (373-466)||(33151310-33151398)
chr7 (476-549)||(37398774-37398847)
chr7 (205-362)||(39581656-39581813)
chr7 (374-549)||(48705882-48706055)
chr7 (255-362)||(37218189-37218296)
chr7 (373-463)||(8155001-8155091)
chr7 (373-466)||(16983706-16983799)
chr7 (318-362)||(6467225-6467269)
chr7 (282-362)||(48775577-48775657)
chr7 (418-452)||(16278253-16278287)
chr7 (205-362)||(30861021-30861178)
chr7 (408-465)||(5730941-5730998)
chr7 (213-310)||(43185720-43185817)
chr7 (422-463)||(43737233-43737274)
chr7 (373-417)||(6467800-6467844)
chr7 (379-431)||(16278423-16278475)
chr7 (515-549)||(24690216-24690250)
chr7 (515-549)||(36629445-36629479)
chr7 (326-362)||(25613198-25613234)
[»] chr8 (53 HSPs)
chr8 (373-570)||(8621499-8621695)
chr8 (358-550)||(3094772-3094962)
chr8 (373-549)||(27927824-27927998)
chr8 (373-466)||(28916877-28916970)
chr8 (391-549)||(36980689-36980845)
chr8 (190-351)||(8621767-8621927)
chr8 (373-466)||(8885417-8885510)
chr8 (373-549)||(40392638-40392812)
chr8 (373-462)||(40994894-40994983)
chr8 (373-466)||(42280855-42280948)
chr8 (373-549)||(36317894-36318072)
chr8 (372-467)||(16310700-16310795)
chr8 (372-467)||(37248659-37248754)
chr8 (373-466)||(34853430-34853523)
chr8 (373-465)||(7982480-7982572)
chr8 (373-466)||(9073606-9073699)
chr8 (373-549)||(11698199-11698373)
chr8 (373-466)||(14164021-14164114)
chr8 (373-466)||(36165802-36165895)
chr8 (373-466)||(44106325-44106418)
chr8 (375-549)||(7981618-7981790)
chr8 (407-497)||(7965903-7965993)
chr8 (373-466)||(4259599-4259692)
chr8 (373-466)||(17119843-17119936)
chr8 (373-549)||(31519775-31519949)
chr8 (373-466)||(33472380-33472473)
chr8 (394-462)||(31234486-31234554)
chr8 (372-466)||(33472172-33472266)
chr8 (400-464)||(9845315-9845379)
chr8 (394-466)||(10833479-10833551)
chr8 (256-362)||(36980556-36980661)
chr8 (190-355)||(7966120-7966285)
chr8 (372-547)||(6395185-6395358)
chr8 (372-549)||(28423522-28423696)
chr8 (373-549)||(1374042-1374216)
chr8 (401-454)||(41530805-41530858)
chr8 (374-454)||(1076659-1076738)
chr8 (394-454)||(24627697-24627757)
chr8 (256-362)||(33472036-33472142)
chr8 (483-549)||(41876707-41876773)
chr8 (389-466)||(40328015-40328092)
chr8 (390-549)||(21004503-21004660)
chr8 (190-310)||(28219151-28219271)
chr8 (395-454)||(31234705-31234764)
chr8 (373-451)||(9845495-9845573)
chr8 (255-358)||(10840848-10840947)
chr8 (392-454)||(24627903-24627965)
chr8 (373-466)||(10840721-10840814)
chr8 (235-362)||(4259720-4259848)
chr8 (418-466)||(34645524-34645572)
chr8 (325-362)||(24627605-24627642)
chr8 (325-362)||(31234817-31234854)
chr8 (373-449)||(32504284-32504360)
[»] scaffold0006 (2 HSPs)
scaffold0006 (373-566)||(59836-60027)
scaffold0006 (383-497)||(59472-59584)
[»] chr1 (47 HSPs)
chr1 (372-549)||(3561218-3561393)
chr1 (372-549)||(17000479-17000655)
chr1 (380-550)||(41584547-41584715)
chr1 (380-549)||(45567773-45567940)
chr1 (373-466)||(15069805-15069898)
chr1 (373-547)||(7011312-7011484)
chr1 (372-549)||(34162604-34162780)
chr1 (372-466)||(27794932-27795026)
chr1 (377-550)||(45046732-45046903)
chr1 (373-462)||(32817579-32817668)
chr1 (373-466)||(42546069-42546162)
chr1 (205-357)||(890426-890578)
chr1 (373-549)||(24472710-24472884)
chr1 (405-549)||(25563297-25563439)
chr1 (373-549)||(33611293-33611467)
chr1 (373-466)||(44573061-44573153)
chr1 (373-466)||(49677585-49677678)
chr1 (373-549)||(52744726-52744900)
chr1 (373-549)||(40650558-40650732)
chr1 (379-454)||(9446071-9446146)
chr1 (373-549)||(34006362-34006537)
chr1 (373-466)||(28866594-28866687)
chr1 (373-549)||(42928986-42929160)
chr1 (256-362)||(800886-800992)
chr1 (373-463)||(23442840-23442930)
chr1 (373-463)||(49786370-49786460)
chr1 (373-549)||(18583427-18583601)
chr1 (373-466)||(8704482-8704575)
chr1 (385-462)||(40907902-40907979)
chr1 (372-543)||(5284208-5284378)
chr1 (373-463)||(26723455-26723545)
chr1 (394-447)||(800781-800834)
chr1 (373-434)||(32542495-32542556)
chr1 (394-466)||(43318944-43319016)
chr1 (429-549)||(38885371-38885489)
chr1 (394-466)||(9445850-9445922)
chr1 (408-466)||(800556-800614)
chr1 (377-439)||(834820-834882)
chr1 (373-454)||(890616-890697)
chr1 (401-454)||(43319167-43319220)
chr1 (476-549)||(45879992-45880065)
chr1 (204-360)||(7828295-7828451)
chr1 (373-404)||(38885329-38885360)
chr1 (515-549)||(42546210-42546244)
chr1 (476-549)||(6223634-6223707)
chr1 (397-446)||(6223730-6223779)
chr1 (326-354)||(42928931-42928959)
[»] chr5 (68 HSPs)
chr5 (373-549)||(27158148-27158322)
chr5 (373-466)||(28083342-28083435)
chr5 (373-549)||(33487674-33487849)
chr5 (372-549)||(4064602-4064778)
chr5 (373-549)||(31221222-31221396)
chr5 (372-549)||(29862675-29862851)
chr5 (373-466)||(31929089-31929181)
chr5 (373-466)||(38871735-38871828)
chr5 (373-466)||(20891677-20891770)
chr5 (373-466)||(38372373-38372466)
chr5 (373-466)||(38692747-38692840)
chr5 (373-547)||(37183666-37183838)
chr5 (373-459)||(15799289-15799375)
chr5 (373-466)||(32841934-32842028)
chr5 (373-546)||(39524840-39525011)
chr5 (373-466)||(6156795-6156888)
chr5 (373-454)||(21070430-21070511)
chr5 (373-549)||(40613558-40613732)
chr5 (378-549)||(12847512-12847681)
chr5 (373-452)||(25747089-25747168)
chr5 (373-466)||(8738949-8739042)
chr5 (373-466)||(26093510-26093603)
chr5 (372-550)||(6800809-6800985)
chr5 (379-466)||(8739152-8739239)
chr5 (389-549)||(14111947-14112103)
chr5 (374-465)||(24203649-24203740)
chr5 (372-549)||(7884256-7884431)
chr5 (373-463)||(15957813-15957903)
chr5 (373-463)||(26190265-26190355)
chr5 (373-454)||(13908612-13908693)
chr5 (373-466)||(40619954-40620047)
chr5 (265-362)||(41253240-41253337)
chr5 (386-466)||(8973573-8973653)
chr5 (192-359)||(14001553-14001717)
chr5 (381-460)||(27494123-27494202)
chr5 (256-351)||(26622017-26622113)
chr5 (373-466)||(26095156-26095249)
chr5 (394-455)||(28445380-28445441)
chr5 (394-466)||(34530300-34530372)
chr5 (373-549)||(41253364-41253538)
chr5 (256-466)||(23269272-23269494)
chr5 (476-549)||(33901124-33901197)
chr5 (401-454)||(38640818-38640871)
chr5 (373-537)||(41639385-41639550)
chr5 (379-463)||(16429352-16429436)
chr5 (277-351)||(11186271-11186345)
chr5 (373-549)||(26622177-26622348)
chr5 (392-466)||(28445173-28445247)
chr5 (401-454)||(38641026-38641079)
chr5 (401-454)||(43388042-43388094)
chr5 (256-355)||(41639585-41639682)
chr5 (392-454)||(4650178-4650240)
chr5 (257-362)||(18514732-18514838)
chr5 (190-315)||(28445542-28445668)
chr5 (392-466)||(34530117-34530190)
chr5 (482-550)||(26898685-26898753)
chr5 (255-355)||(7036467-7036569)
chr5 (373-428)||(11186177-11186232)
chr5 (409-460)||(27493919-27493970)
chr5 (408-466)||(16429171-16429229)
chr5 (515-549)||(31929008-31929042)
chr5 (373-450)||(1350290-1350367)
chr5 (329-362)||(3435255-3435288)
chr5 (333-362)||(14649949-14649978)
chr5 (476-549)||(26093621-26093694)
chr5 (399-435)||(8032330-8032366)
chr5 (395-463)||(12465086-12465154)
chr5 (266-310)||(30209225-30209269)
[»] chr6 (33 HSPs)
chr6 (372-549)||(23406897-23407073)
chr6 (373-466)||(2539553-2539646)
chr6 (375-549)||(2813107-2813280)
chr6 (376-552)||(236899-237072)
chr6 (373-466)||(1945494-1945587)
chr6 (373-466)||(3717247-3717340)
chr6 (373-549)||(29289508-29289682)
chr6 (373-466)||(4508266-4508359)
chr6 (373-466)||(5699667-5699760)
chr6 (373-549)||(14587443-14587617)
chr6 (385-466)||(34528554-34528635)
chr6 (373-466)||(17264512-17264605)
chr6 (372-549)||(6704010-6704184)
chr6 (373-549)||(16450316-16450490)
chr6 (373-466)||(24604325-24604418)
chr6 (373-550)||(13800909-13801084)
chr6 (373-466)||(29519381-29519474)
chr6 (418-549)||(21514914-21515043)
chr6 (205-355)||(4893102-4893252)
chr6 (373-466)||(7734290-7734383)
chr6 (258-362)||(10310486-10310591)
chr6 (476-547)||(14037850-14037921)
chr6 (422-549)||(10310314-10310439)
chr6 (373-463)||(5638964-5639054)
chr6 (256-310)||(13896075-13896129)
chr6 (391-451)||(9905234-9905295)
chr6 (406-459)||(17501001-17501054)
chr6 (257-345)||(29631015-29631101)
chr6 (515-549)||(9905357-9905391)
chr6 (373-454)||(14037938-14038019)
chr6 (426-463)||(32044537-32044574)
chr6 (325-361)||(9905156-9905192)
chr6 (426-454)||(17501236-17501264)
[»] chr2 (48 HSPs)
chr2 (205-549)||(19109893-19110250)
chr2 (373-466)||(17474758-17474851)
chr2 (373-466)||(32187828-32187921)
chr2 (373-549)||(41203064-41203238)
chr2 (373-466)||(15995072-15995165)
chr2 (373-466)||(33452402-33452495)
chr2 (373-466)||(39447264-39447357)
chr2 (373-549)||(41510307-41510480)
chr2 (373-466)||(44465686-44465779)
chr2 (374-549)||(42478846-42479019)
chr2 (373-464)||(42894479-42894570)
chr2 (373-463)||(36948907-36948997)
chr2 (373-454)||(5507521-5507602)
chr2 (204-355)||(33440554-33440707)
chr2 (373-549)||(35251032-35251206)
chr2 (373-466)||(45153750-45153843)
chr2 (392-466)||(17766788-17766862)
chr2 (372-549)||(45293742-45293916)
chr2 (373-549)||(34517203-34517377)
chr2 (373-466)||(36875087-36875180)
chr2 (373-466)||(8388753-8388846)
chr2 (372-466)||(27900573-27900667)
chr2 (476-549)||(13704690-13704763)
chr2 (373-466)||(16750388-16750479)
chr2 (376-464)||(25217736-25217825)
chr2 (401-466)||(34519496-34519561)
chr2 (373-454)||(38066644-38066725)
chr2 (374-549)||(26228169-26228342)
chr2 (420-549)||(30763798-30763925)
chr2 (256-362)||(34519620-34519726)
chr2 (401-454)||(9847183-9847236)
chr2 (255-351)||(34817059-34817155)
chr2 (373-466)||(41854863-41854951)
chr2 (372-452)||(3957874-3957954)
chr2 (257-354)||(3957988-3958088)
chr2 (388-460)||(33440474-33440546)
chr2 (408-459)||(9847386-9847437)
chr2 (373-462)||(33833857-33833943)
chr2 (418-546)||(37773696-37773823)
chr2 (205-354)||(30763562-30763710)
chr2 (385-466)||(34817215-34817296)
chr2 (406-454)||(25715695-25715743)
chr2 (294-362)||(37773888-37773958)
chr2 (257-362)||(2764481-2764584)
chr2 (266-360)||(38308875-38308969)
chr2 (376-462)||(41204037-41204123)
chr2 (516-549)||(38308710-38308743)
chr2 (418-454)||(38308804-38308840)
[»] chr4 (60 HSPs)
chr4 (373-466)||(53893989-53894082)
chr4 (373-466)||(2505995-2506088)
chr4 (373-466)||(40703774-40703867)
chr4 (375-549)||(41412981-41413153)
chr4 (372-549)||(55052501-55052677)
chr4 (373-466)||(8106503-8106597)
chr4 (373-466)||(19835630-19835723)
chr4 (373-466)||(48319028-48319121)
chr4 (373-549)||(25752326-25752501)
chr4 (373-466)||(25491359-25491452)
chr4 (373-549)||(14474095-14474268)
chr4 (373-466)||(17933101-17933194)
chr4 (373-549)||(38536280-38536455)
chr4 (373-549)||(6003556-6003730)
chr4 (373-546)||(7863551-7863722)
chr4 (373-550)||(31582304-31582479)
chr4 (373-463)||(34972974-34973064)
chr4 (373-466)||(7931767-7931860)
chr4 (373-466)||(27879658-27879751)
chr4 (373-549)||(46440155-46440331)
chr4 (373-549)||(32441920-32442094)
chr4 (390-546)||(41322978-41323132)
chr4 (379-454)||(25140691-25140766)
chr4 (376-466)||(47784101-47784191)
chr4 (373-451)||(372029-372107)
chr4 (401-454)||(25140898-25140951)
chr4 (476-549)||(47456811-47456884)
chr4 (374-466)||(3703213-3703305)
chr4 (390-466)||(25538943-25539019)
chr4 (373-463)||(6228780-6228870)
chr4 (205-307)||(14474349-14474451)
chr4 (256-362)||(20083002-20083107)
chr4 (372-437)||(38416936-38417002)
chr4 (375-466)||(27742077-27742169)
chr4 (266-362)||(55433803-55433899)
chr4 (256-354)||(7863208-7863306)
chr4 (392-466)||(25140470-25140544)
chr4 (408-454)||(47873955-47874001)
chr4 (372-462)||(49002822-49002912)
chr4 (373-439)||(53836209-53836275)
chr4 (373-466)||(42497840-42497933)
chr4 (393-466)||(52089315-52089388)
chr4 (255-323)||(29515484-29515552)
chr4 (373-549)||(37222071-37222244)
chr4 (255-362)||(53836302-53836409)
chr4 (476-550)||(29822791-29822865)
chr4 (389-451)||(32600966-32601028)
chr4 (256-316)||(20078524-20078584)
chr4 (394-454)||(42660351-42660411)
chr4 (186-362)||(47456507-47456683)
chr4 (514-549)||(18051072-18051107)
chr4 (373-404)||(29822729-29822760)
chr4 (515-549)||(2505914-2505948)
chr4 (401-435)||(7794198-7794232)
chr4 (257-362)||(39118096-39118201)
chr4 (333-362)||(42497961-42497990)
chr4 (476-549)||(48095750-48095823)
chr4 (373-461)||(346135-346222)
chr4 (282-362)||(3703334-3703414)
chr4 (514-546)||(49001446-49001478)
[»] scaffold0027 (1 HSPs)
scaffold0027 (373-462)||(141931-142020)
[»] scaffold0508 (1 HSPs)
scaffold0508 (373-549)||(3277-3452)
[»] scaffold0137 (1 HSPs)
scaffold0137 (373-466)||(9461-9554)
[»] scaffold0010 (1 HSPs)
scaffold0010 (408-549)||(140622-140761)
[»] scaffold0564 (2 HSPs)
scaffold0564 (373-454)||(4473-4554)
scaffold0564 (326-362)||(4408-4444)
[»] scaffold0400 (1 HSPs)
scaffold0400 (205-355)||(9100-9249)
[»] scaffold0365 (1 HSPs)
scaffold0365 (205-355)||(9743-9892)
[»] scaffold0182 (1 HSPs)
scaffold0182 (408-466)||(23239-23297)
[»] scaffold0014 (1 HSPs)
scaffold0014 (373-462)||(100881-100970)
[»] scaffold0016 (1 HSPs)
scaffold0016 (394-454)||(205782-205842)


Alignment Details
Target: chr3 (Bit Score: 202; Significance: 1e-110; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 362 - 602
Target Start/End: Complemental strand, 47980074 - 47979833
Alignment:
Q  362 aaacagtcacaattatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaact 461  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  47980074 aaacagtcacaattatataatccgaactgtatcagcacaaattttgaacatatttataacatagatagtcattttaaggacaatattaatctttctaact 47979975  T
Q  462 ctcatggatagtcattttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaacttggcattgaccat 561  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  47979974 ctcatggatagtcattttaggtcattgttagttgttattaatcaaaaaatcaatttccgggctacttgatcagattgctccgaaacttggcattgaccat 47979875  T
Q  562 aaaatcagg-nnnnnnnntcaaggatcatgactctcttagaa 602  Q
    |||||||||         ||||||||||||||||||||||||    
T  47979874 aaaatcaggaaaaaaaaatcaaggatcatgactctcttagaa 47979833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 373 - 549
Target Start/End: Original strand, 50716354 - 50716529
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatag 472  Q
    ||||||||||| |||||||||||||||||||| | ||||| ||| ||||||| |||||||||||| |||||||||||||||| |||||||||||  ||      
T  50716354 attatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatgaatagtcattttagggacaatattaatcttcctaactctcat-cattc 50716452  T
Q  473 tcattttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
       |||| ||||||||||| ||||| ||| |||||||     |||||||||||||||||| ||||||||||||||||    
T  50716453 cgtttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctccgaaactt 50716529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 373 - 549
Target Start/End: Complemental strand, 50796493 - 50796318
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatag 472  Q
    ||||||||||| |||||||||||||||||||| | ||||| ||| ||||||| |||||||||||| |||||||||||||||| |||||||||||  ||      
T  50796493 attatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatgaatagtcattttagggacaatattaatcttcctaactctcat-cattc 50796395  T
Q  473 tcattttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
       |||| ||||||||||| ||||| ||| |||||||     |||||||||||||||||| ||||||||||||||||    
T  50796394 cgtttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctccgaaactt 50796318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 372 - 466
Target Start/End: Complemental strand, 38977806 - 38977712
Alignment:
Q  372 aattatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    ||||||||||||||||||||||||||||||||| | ||||| ||| |||||||||||||||||||| |||||||||||||||| |||||||||||    
T  38977806 aattatataatccgaactgtatcagcacaaattataaacatgtttgtaacatggatagtcattttatggacaatattaatcttcctaactctcat 38977712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 372 - 466
Target Start/End: Original strand, 51258504 - 51258599
Alignment:
Q  372 aattatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaagg-acaatattaatctttctaactctcat 466  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| || ||||||||||||||  ||||||||||    
T  51258504 aattatataatccgaactgtatcagcacaaattttaaacatgtttataacatggatagtcattttagggaacaatattaatcttcataactctcat 51258599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 372 - 466
Target Start/End: Complemental strand, 3352124 - 3352030
Alignment:
Q  372 aattatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    |||||||||||| |||||||||||||||||||| | ||||| ||| |||||||||||||||||||| |||||||||||||||| |||||||||||    
T  3352124 aattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcat 3352030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 373 - 549
Target Start/End: Original strand, 35142176 - 35142350
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatag 472  Q
    ||||||||||  ||| |||||||||||||||| | ||||| ||| ||||||||||||||||||||| ||||||||||||||| |||||||||||   |      
T  35142176 attatataatatgaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttaaagacaatattaatcttcctaactctcatccttct 35142275  T
Q  473 tcattttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
     |  ||| |||||||||||  |||| ||| ||||||| |   |||||||||||||||||| ||||||||||||||||    
T  35142276 gc--tttgggtcattgttatctgttcttagtcaaaaactgggttttcgggctacttgatcggattgctccgaaactt 35142350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 373 - 549
Target Start/End: Original strand, 28873107 - 28873282
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatag 472  Q
    ||||||||||| |||||||||||||||||||| | ||||| ||| |||||| ||||||||||||| ||||||||||||||||  ||||||||||   |      
T  28873107 attatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatagatagtcattttagggacaatattaatcttcttaactctcattcttcc 28873206  T
Q  473 tcattttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
     | |||| ||||| ||||| ||||| ||| |||||||     |||||||||||||||||| ||||||||||||||||    
T  28873207 gc-ttttgggtcactgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctccgaaactt 28873282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 372 - 463
Target Start/End: Complemental strand, 43473027 - 43472936
Alignment:
Q  372 aattatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactct 463  Q
    ||||||||||||||||||||||||||||||||  | ||||||||| ||||||| |||| |||||||||||||||||||||||| ||||||||    
T  43473027 aattatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttaaggacaatattaatcttcctaactct 43472936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 381 - 550
Target Start/End: Original strand, 47123136 - 47123303
Alignment:
Q  381 atccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatagtcatttta 480  Q
    |||||||||||||||||||||||| | ||||| ||| ||||||||||| |||||||| |||||||||||||||| |||||||||||   |     ||||     
T  47123136 atccgaactgtatcagcacaaattctaaacatgtttgtaacatggataatcattttagggacaatattaatcttcctaactctcatcctt--ctgttttg 47123233  T
Q  481 ggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaacttg 550  Q
    || ||||||||  |||| ||| | |||||   |||||||||||||||||||| |||||||||||||||||    
T  47123234 ggccattgttacctgttcttagttaaaaaccgaattttcgggctacttgatcggattgctccgaaacttg 47123303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 373 - 466
Target Start/End: Original strand, 33438623 - 33438716
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    ||||||||||| |||||||||||||||||||| | ||||| ||| ||| |||||||||||||||| |||||||||||||||| |||||||||||    
T  33438623 attatataatctgaactgtatcagcacaaattctaaacatgtttgtaatatggatagtcattttagggacaatattaatcttcctaactctcat 33438716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 381 - 550
Target Start/End: Original strand, 47130502 - 47130669
Alignment:
Q  381 atccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatagtcatttta 480  Q
    |||||||||||||||||||||||| | ||||| ||| ||||||||| | |||||||| |||||||||||||||| |||||||||||   |     ||||     
T  47130502 atccgaactgtatcagcacaaattctaaacatgtttgtaacatggacaatcattttagggacaatattaatcttcctaactctcatcctt--ctgttttg 47130599  T
Q  481 ggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaacttg 550  Q
    || ||||||||  |||| ||| | |||||   |||||||||||||||||||| |||||||||||||||||    
T  47130600 ggccattgttacctgttcttagttaaaaaccgaattttcgggctacttgatcggattgctccgaaacttg 47130669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 373 - 466
Target Start/End: Complemental strand, 501198 - 501105
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    ||||||||||||||||||||| |||||||||| | ||||| ||| ||| |||||||||||||||| |||||||||||||||| ||| |||||||    
T  501198 attatataatccgaactgtataagcacaaattctaaacatgtttgtaaaatggatagtcattttatggacaatattaatcttcctagctctcat 501105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 373 - 466
Target Start/End: Complemental strand, 3902863 - 3902770
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    |||||||||||||||||||||||||||||||| | ||||| ||| ||||||||||  |||||||| ||||||||||||||||  ||||||||||    
T  3902863 attatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatgatcattttatggacaatattaatcttcataactctcat 3902770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 372 - 466
Target Start/End: Complemental strand, 49096285 - 49096190
Alignment:
Q  372 aattatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaagg-acaatattaatctttctaactctcat 466  Q
    |||||||||||| |||||||||||||||||||||| ||||| ||| |||||| ||||||||||||| || ||||||| |||||| |||||||||||    
T  49096285 aattatataatctgaactgtatcagcacaaattttaaacatgtttgtaacatagatagtcattttagggaacaatataaatcttcctaactctcat 49096190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 373 - 463
Target Start/End: Complemental strand, 2358679 - 2358589
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactct 463  Q
    |||||||||||||||||||||||||| ||||  | ||||||||| ||||||| |||| ||||||| |||||||||||||||| ||||||||    
T  2358679 attatataatccgaactgtatcagcataaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactct 2358589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 373 - 459
Target Start/End: Complemental strand, 34821400 - 34821314
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaa 459  Q
    ||||||||||| |||||||||||||||||||| | ||||| ||| |||||| ||||||||||||| |||||||||||||||| ||||    
T  34821400 attatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatagatagtcattttatggacaatattaatcttcctaa 34821314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 373 - 466
Target Start/End: Complemental strand, 47739989 - 47739896
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    ||||||||||| |||||||||||||||||||| | ||||| ||| |||||| ||||||||||| | ||||||||||||||||  ||||||||||    
T  47739989 attatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatagatagtcatttaagggacaatattaatcttcataactctcat 47739896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 373 - 466
Target Start/End: Complemental strand, 51540671 - 51540578
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    ||||||||||| |||  ||||||||||||||| | ||||| ||| |||| ||||||||||||||| |||||||||||||||| |||||||||||    
T  51540671 attatataatctgaatagtatcagcacaaattctaaacatgtttgtaacttggatagtcattttagggacaatattaatcttcctaactctcat 51540578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 406 - 549
Target Start/End: Complemental strand, 35345933 - 35345792
Alignment:
Q  406 tgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatagtcattttaggtcattgttagttgttattaatca 505  Q
    ||||||| ||| |||||||||||||||||||| ||||||||||||| ||||||||||||||   |  |  ||||  |||||||||||||||| ||| |||    
T  35345933 tgaacatgtttgtaacatggatagtcattttatggacaatattaatatttctaactctcatcctt--ttgtttttcgtcattgttagttgttcttagtca 35345836  T
Q  506 aaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
    |||| |   |||||||| || |||||| ||||||||||||||||    
T  35345835 aaaattgggttttcgggttaattgatcggattgctccgaaactt 35345792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 374 - 466
Target Start/End: Original strand, 39149912 - 39150004
Alignment:
Q  374 ttatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    |||||||||||||||| |||||||||||||||| ||||| ||| |||||| | |||||||||||  |||||||||||| || |||||||||||    
T  39149912 ttatataatccgaactctatcagcacaaattttaaacatgtttgtaacattggtagtcattttagagacaatattaattttcctaactctcat 39150004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 373 - 461
Target Start/End: Complemental strand, 45712141 - 45712053
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaact 461  Q
    ||||||||||| |||||||||||||||||||| ||| ||| ||| ||||||||||| ||||||||| ||| ||||||||||| ||||||    
T  45712141 attatataatctgaactgtatcagcacaaattatgatcatgtttgtaacatggataatcattttaaagaccatattaatcttcctaact 45712053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 27143474 - 27143396
Alignment:
Q  372 aattatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaa 450  Q
    |||||||||||| || ||||||||||||||||| ||||||| ||| ||||||||||||| |||||||||| ||||||||    
T  27143474 aattatataatctgatctgtatcagcacaaattctgaacatgtttgtaacatggatagttattttaaggataatattaa 27143396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 373 - 454
Target Start/End: Original strand, 3937481 - 3937562
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctt 454  Q
    |||||||||||||||||||||||||||||||  | ||||||||| ||||||| |||  ||||||| ||||||||||||||||    
T  3937481 attatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtataaccattttatggacaatattaatctt 3937562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 373 - 549
Target Start/End: Original strand, 47302122 - 47302294
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatag 472  Q
    |||||||||||||||||||||||||||||||  | ||||||||| ||||||| |||| |||||| ||||||||||||||  |||||||||| ||   |      
T  47302122 attatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtatagccatttt-aggacaatattaat-attctaactcttatcctt-- 47302217  T
Q  473 tcattttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
    |  |||| |||||||||||  |||| ||| |||||||   | |||||||||||||||||| ||||| || |||||||    
T  47302218 ttgttttgggtcattgttacatgttcttagtcaaaaatcgagttttcgggctacttgatcggattgttctgaaactt 47302294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 373 - 497
Target Start/End: Original strand, 47769364 - 47769486
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatag 472  Q
    |||||| |||| ||| ||||||||| |||||| ||||||| ||| |||||||||||||||||||||| |  |||||||||||| ||||| ||||  ||      
T  47769364 attatagaatctgaattgtatcagcgcaaattctgaacatgtttgtaacatggatagtcattttaagaatcatattaatctttttaactatcat-cattc 47769462  T
Q  473 tcattttaggtcattgttagttgtt 497  Q
    | |||||||||||||||||||||||    
T  47769463 t-attttaggtcattgttagttgtt 47769486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 372 - 541
Target Start/End: Original strand, 29035899 - 29036067
Alignment:
Q  372 aattatataatccgaactgt-atcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggat 470  Q
    |||||||||||| ||||||| |||| |||||||| | | ||| ||| ||||||||||| ||||||||||||| |||||| |||| |||||||||||   |    
T  29035899 aattatataatctgaactgttatcaacacaaattctaagcatgtttgtaacatggataatcattttaaggaccatattactcttcctaactctcatcatt 29035998  T
Q  471 agtcattttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctc 541  Q
    |    ||||||||||||||||  ||||   |||| ||||| |||| ||| ||||| |||||||||||||||    
T  29035999 a--tgttttaggtcattgttaactgttcccaatcgaaaaaacaatattctggctatttgatcagattgctc 29036067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 373 - 546
Target Start/End: Original strand, 40062481 - 40062652
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatag 472  Q
    ||||||||||||||||| ||||||||||||||||||   | ||| |||||||||||   | ||||| ||| ||||||||||| ||||||||  |   |      
T  40062481 attatataatccgaactatatcagcacaaattttgagtttgtttgtaacatggataactagtttaaagaccatattaatcttcctaactctggtcctt-- 40062578  T
Q  473 tcattttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaa 546  Q
    |  |||||||||||| ||||||||| ||| |||||||     ||||||||||||||||||||||||| ||||||    
T  40062579 ttgttttaggtcattattagttgttcttagtcaaaaatctggttttcgggctacttgatcagattgcaccgaaa 40062652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 377 - 549
Target Start/End: Original strand, 51492905 - 51493076
Alignment:
Q  377 tataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatagtcat 476  Q
    ||||||||||||||||  |||||||||| | | ||| ||| ||| ||| ||||| |||||| |||||||||||||||| |||||||||||   ||    |    
T  51492905 tataatccgaactgtactagcacaaattctaatcatgtttgtaatatgaatagttattttatggacaatattaatcttcctaactctcatcctta--tgt 51493002  T
Q  477 tttaggtcattgttagttgttattaatcaaaaaa-tcaattttcgggctacttgatcagattgctccgaaactt 549  Q
    ||| |||||||||||| |||| ||| | |||||| |   |||| || |||||||||||||||||||||||||||    
T  51493003 ttttggtcattgttagctgttcttagtaaaaaaattgggtttttggcctacttgatcagattgctccgaaactt 51493076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 373 - 463
Target Start/End: Original strand, 52777333 - 52777423
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactct 463  Q
    ||||||||||  |||||||||||||||||||| | ||||| ||| ||||||| |||| ||||||| ||||||||||||||||  |||||||    
T  52777333 attatataatttgaactgtatcagcacaaattctaaacatgtttgtaacatgtatagccattttagggacaatattaatcttcttaactct 52777423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 394 - 451
Target Start/End: Original strand, 8735309 - 8735366
Alignment:
Q  394 cagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaat 451  Q
    |||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  8735309 cagcaccaattctgaacatgtttataacatggatagtcattttaaggacaatattaat 8735366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 394 - 451
Target Start/End: Original strand, 9087550 - 9087607
Alignment:
Q  394 cagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaat 451  Q
    |||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  9087550 cagcaccaattctgaacatgtttataacatggatagtcattttaaggacaatattaat 9087607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 373 - 465
Target Start/End: Complemental strand, 26053578 - 26053485
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaagg-acaatattaatctttctaactctca 465  Q
    |||||||||||| |||||||||| |||||||| | ||||| |||||||| ||||||||||||||| || |||||| ||||||| |||| |||||    
T  26053578 attatataatccaaactgtatcaacacaaattctaaacatgtttataacttggatagtcattttagggaacaatactaatcttcctaattctca 26053485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 373 - 549
Target Start/End: Complemental strand, 46622841 - 46622678
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatag 472  Q
    |||||||||||||||||||||||||||||||| |            ||||||||||||||||||| |||||||||||||||| || ||||||||   |      
T  46622841 attatataatccgaactgtatcagcacaaattct-----------aaacatggatagtcattttagggacaatattaatcttccttactctcat---tct 46622756  T
Q  473 tc-attttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
    ||  |||| ||||||||||| ||||| ||| |||||||    |||||||| |||||||||| ||||||||||||||||    
T  46622755 tctgttttgggtcattgttacttgttcttagtcaaaaatcggattttcggactacttgatcggattgctccgaaactt 46622678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 373 - 549
Target Start/End: Complemental strand, 54229954 - 54229780
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatag 472  Q
    |||||||||| | |||||||||| |||||||| |||   | ||| ||||||| |||  || ||||||||| ||||||||||| || |||| |||   ||     
T  54229954 attatataattcaaactgtatcaacacaaattctgagtctgtttgtaacatgaatatccagtttaaggaccatattaatcttccttactcgcatcattat 54229855  T
Q  473 tcattttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
       || ||||||||||||||||||||||| ||||||| ||  |||||  |||||||||||||||||||| |||||||    
T  54229854 g--ttctaggtcattgttagttgttattagtcaaaaattcggttttcttgctacttgatcagattgctctgaaactt 54229780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 374 - 454
Target Start/End: Complemental strand, 5127955 - 5127875
Alignment:
Q  374 ttatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctt 454  Q
    |||||||||| ||| |||||||||| ||||||| ||||| ||| |||||||||||  ||||||| ||||||||||||||||    
T  5127955 ttatataatctgaattgtatcagcataaattttaaacatgtttgtaacatggatatccattttatggacaatattaatctt 5127875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 373 - 464
Target Start/End: Complemental strand, 512305 - 512214
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctc 464  Q
    ||||||| ||| ||| |||||||  ||||||| ||||||| ||||||||||||||||||||||||| ||| |||||||| ||  ||||||||    
T  512305 attatatcatctgaattgtatcaatacaaattatgaacatgtttataacatggatagtcattttaaagaccatattaatattcataactctc 512214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 418 - 552
Target Start/End: Original strand, 46624867 - 46624999
Alignment:
Q  418 taacatggatagtcattttaaggacaatattaatctttctaactctcatggatagtcattttaggtcattgttagttgttattaatcaaaaaatcaattt 517  Q
    ||||||| |||||||||||| ||| |||||||||||| |||||||||||   |     |||| ||||||| ||||||||||||| |||||||   |||||    
T  46624867 taacatgtatagtcattttatggaaaatattaatcttcctaactctcatccttctg--ttttgggtcattattagttgttattagtcaaaaatctaattt 46624964  T
Q  518 tcgggctacttgatcagattgctccgaaacttggc 552  Q
    | || ||||||||||  ||||||||||||||||||    
T  46624965 ttggactacttgatcgaattgctccgaaacttggc 46624999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 392 - 466
Target Start/End: Original strand, 8735514 - 8735588
Alignment:
Q  392 atcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    |||| ||| |||| ||||||| ||| |||||| |||||||||||||||||||||||||||||| |||||| ||||    
T  8735514 atcaacaccaattatgaacatgtttgtaacattgatagtcattttaaggacaatattaatcttcctaactttcat 8735588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 392 - 466
Target Start/End: Original strand, 9087755 - 9087829
Alignment:
Q  392 atcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    |||| ||| |||| ||||||| ||| |||||| |||||||||||||||||||||||||||||| |||||| ||||    
T  9087755 atcaacaccaattatgaacatgtttgtaacattgatagtcattttaaggacaatattaatcttcctaactttcat 9087829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 373 - 549
Target Start/End: Complemental strand, 14828976 - 14828801
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatag 472  Q
    ||||||||||||||| | ||| | | |||||| | || || ||||||||||||||| | |||||||||| ||||||||||||  |||| |||||  ||      
T  14828976 attatataatccgaaatatattaacgcaaattctaaatatgtttataacatggataataattttaaggataatattaatcttcataaccctcatccat-- 14828879  T
Q  473 tcattttaggtcattgttagttgttattaatcaaaaaatc-aattttcgggctacttgatcagattgctccgaaactt 549  Q
       |||| |||| |||||||||||| ||| ||||||||||  ||||||||  ||||||||  ||||||||||||||||    
T  14828878 ctgttttgggtccttgttagttgttcttagtcaaaaaatctgattttcggattacttgattggattgctccgaaactt 14828801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 206 - 362
Target Start/End: Original strand, 29048258 - 29048417
Alignment:
Q  206 attttcggattttagaatccaaacttagttttttcttcgttatgatatg--gaaaaaatgattttttcaccatttcaaattttataattcgaaaacctca 303  Q
    ||||| |||||||| ||||| |||| ||||||| ||| ||||||   ||  ||||||| || |||||||||| |||| ||||||||||  |||| ||||     
T  29048258 atttttggattttaaaatccgaactaagtttttcctttgttatggggtgaagaaaaaaagagtttttcaccaattcagattttataatatgaaa-cctcc 29048356  T
Q  304 aaaaatatggcgttttcctttatttttc--cggattatagaatccgaacaccccctaaaca 362  Q
    ||||||| |||   |||||| ||||||   |||||||||||||||||||||||||||||||    
T  29048357 aaaaatagggcaagttccttgattttttttcggattatagaatccgaacaccccctaaaca 29048417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 376 - 466
Target Start/End: Original strand, 46555445 - 46555535
Alignment:
Q  376 atataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    |||||||| ||| ||||| ||||||||||||||  || |||||||||| ||||  |||||||||||| |||||||||||  ||||||||||    
T  46555445 atataatctgaattgtataagcacaaattttgagtatgtttataacatagataaccattttaaggaccatattaatcttcataactctcat 46555535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 454
Target Start/End: Original strand, 45244514 - 45244573
Alignment:
Q  395 agcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctt 454  Q
    ||||| |||| ||||||| ||| |||||||| ||||||||||||||||||||||||||||    
T  45244514 agcaccaattctgaacatgtttgtaacatggttagtcattttaaggacaatattaatctt 45244573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 256 - 354
Target Start/End: Complemental strand, 43472430 - 43472332
Alignment:
Q  256 aaaaaatgattttttcaccatttcaaattttataattcgaaaacctcaaaaaatatggcgttttcctttatttttccggattatagaatccgaacaccc 354  Q
    ||||||||| |||||||||| |||   ||||||||||||||||||||||| |||| ||||  |||||   ||||| ||| ||||||||| |||||||||    
T  43472430 aaaaaatgagtttttcaccaattcggcttttataattcgaaaacctcaaacaatagggcgcgttcctaacttttttcgggttatagaattcgaacaccc 43472332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 401 - 466
Target Start/End: Complemental strand, 33842103 - 33842038
Alignment:
Q  401 aattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    |||||| ||||| ||| ||| |||||||||||||||||||||||||||||| ||  ||||||||||    
T  33842103 aattttaaacatgtttgtaatatggatagtcattttaaggacaatattaatgttcgtaactctcat 33842038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 373 - 450
Target Start/End: Complemental strand, 43420187 - 43420110
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaa 450  Q
    ||||||||||| ||| ||||||| |||||||| ||||||  ||| ||||||||||| |||||||||| || |||||||    
T  43420187 attatataatcagaattgtatcaacacaaattatgaacacgtttgtaacatggataatcattttaagaaccatattaa 43420110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 214 - 330
Target Start/End: Complemental strand, 5128138 - 5128022
Alignment:
Q  214 attttagaatccaaacttagttttttcttcgttatgatatggaaaaaatgattttttcaccatttcaaattttataattcgaaaacctcaaaaaatatgg 313  Q
    |||||| |||||||||  ||||||| ||| |||||    || ||||||||| || ||||||| |||  |||||||||||||||||| |||||||||| ||    
T  5128138 attttaaaatccaaacggagtttttactttgttatagggtgaaaaaaatgagttcttcaccaattcggattttataattcgaaaacttcaaaaaataagg 5128039  T
Q  314 cgttttcctttattttt 330  Q
    |||  ||||| ||||||    
T  5128038 cgtggtccttaattttt 5128022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 373 - 441
Target Start/End: Original strand, 29035816 - 29035884
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaagga 441  Q
    |||||||||| |||| ||||| |  ||||||| ||||||| ||| ||||||||||||||||||||||||    
T  29035816 attatataattcgaattgtatgaatacaaattctgaacatgtttgtaacatggatagtcattttaagga 29035884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 322 - 362
Target Start/End: Complemental strand, 47980131 - 47980091
Alignment:
Q  322 tttatttttccggattatagaatccgaacaccccctaaaca 362  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  47980131 tttatttttccggattatagaatctgaacaccccctaaaca 47980091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 373 - 463
Target Start/End: Complemental strand, 30721861 - 30721777
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactct 463  Q
    |||||||||||||||||||||||||||||||| | ||||| ||| ||||        |||||||| |||||||||||||||| ||||||||    
T  30721861 attatataatccgaactgtatcagcacaaattctaaacatgtttgtaac------tctcattttagggacaatattaatcttcctaactct 30721777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 479 - 546
Target Start/End: Complemental strand, 40062325 - 40062258
Alignment:
Q  479 taggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaa 546  Q
    ||||||||| ||||||||| |||||||||||  | |||||| || |||||||||||||||| ||||||    
T  40062325 taggtcattattagttgttcttaatcaaaaatccgattttcaggttacttgatcagattgcaccgaaa 40062258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 205 - 291
Target Start/End: Complemental strand, 4300523 - 4300437
Alignment:
Q  205 gattttcggattttagaatccaaacttagttttttcttcgttatgatatggaaaaaatgattttttcaccatttcaaattttataat 291  Q
    |||||||||||||||||||||||| | | ||||||||| ||| ||   || || |||||| |||||||||| ||| |||||||||||    
T  4300523 gattttcggattttagaatccaaattaaattttttctttgttgtggggtgaaataaatgagtttttcaccaattcgaattttataat 4300437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 373 - 463
Target Start/End: Original strand, 29048445 - 29048534
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactct 463  Q
    ||||||||||| ||||| ||||| |||||||| |||| || ||| |||||| || ||| |||||||||| ||||||||||||  |||||||    
T  29048445 attatataatcggaactatatcaacacaaattctgaatatgtttgtaacat-gacagttattttaaggataatattaatcttcataactct 29048534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 373 - 463
Target Start/End: Complemental strand, 34010146 - 34010056
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactct 463  Q
    ||||||||||||||| ||||||| || |||||||||   | ||| ||||||||||||  | ||||||||  |||||||| |||||||||||    
T  34010146 attatataatccgaattgtatcaacataaattttgagtctgtttgtaacatggatagctagtttaaggatcatattaatttttctaactct 34010056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 476 - 549
Target Start/End: Complemental strand, 50384432 - 50384358
Alignment:
Q  476 ttttaggtcattgttagttgttattaatcaaaaaat-caattttcgggctacttgatcagattgctccgaaactt 549  Q
    ||||| ||||||||||||| || ||| | ||||||| || ||||||| | |||||||||||||||||||||||||    
T  50384432 ttttatgtcattgttagttattcttagtaaaaaaatgcagttttcggtccacttgatcagattgctccgaaactt 50384358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 45244729 - 45244782
Alignment:
Q  401 aattttgaacatatttataacatggatagtcattttaaggacaatattaatctt 454  Q
    |||| ||||||| |||||||||| |||||||||| ||||||| |||||||||||    
T  45244729 aattctgaacatgtttataacattgatagtcattataaggacgatattaatctt 45244782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 514 - 549
Target Start/End: Original strand, 4394220 - 4394255
Alignment:
Q  514 attttcgggctacttgatcagattgctccgaaactt 549  Q
    |||||||| |||||||||||||||||||||||||||    
T  4394220 attttcggactacttgatcagattgctccgaaactt 4394255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 362
Target Start/End: Original strand, 11266186 - 11266342
Alignment:
Q  205 gattttcggattttagaatccaaacttagttttttcttcgttatgatatggaaaaaatgattttttcaccatttcaaattttataattcgaaaacctcaa 304  Q
    |||||||||| |||||||||| |||| || |||| |||  |||||  |||  |||||||  |||||||| | || | |||||||||| ||||||||| ||    
T  11266186 gattttcggaatttagaatccgaactgagcttttcctttattatgggatg--aaaaatgcgtttttcacaaatttagattttataatccgaaaaccttaa 11266283  T
Q  305 aaaa-tatggcgttttcctttatttttccggattatagaatccgaacaccccctaaaca 362  Q
    |||| || ||| | ||||||  ||||| |||||||||||||  ||||  ||||||||||    
T  11266284 aaaaatagggcatgttccttgcttttttcggattatagaatttgaactgcccctaaaca 11266342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 362
Target Start/End: Original strand, 51816244 - 51816319
Alignment:
Q  287 ataattcgaaaacctcaaaaaatatggcgttttcctttatttttccggattatagaatccgaacaccccctaaaca 362  Q
    |||||| ||||||||||||||||| |  |  || ||| |||||| |||||||||||| |||||||||| |||||||    
T  51816244 ataatttgaaaacctcaaaaaataggatgcattacttgattttttcggattatagaacccgaacaccctctaaaca 51816319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 476 - 546
Target Start/End: Original strand, 51816417 - 51816487
Alignment:
Q  476 ttttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaa 546  Q
    ||||||||||||||||||||||  || || ||||   | ||||| || |||||||||||||||||||||||    
T  51816417 ttttaggtcattgttagttgttcctagtcgaaaatatagttttctggttacttgatcagattgctccgaaa 51816487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 362
Target Start/End: Original strand, 32025021 - 32025058
Alignment:
Q  325 atttttccggattatagaatccgaacaccccctaaaca 362  Q
    |||||| |||||||||||||| ||||||||||||||||    
T  32025021 attttttcggattatagaatctgaacaccccctaaaca 32025058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 506 - 550
Target Start/End: Original strand, 33439413 - 33439458
Alignment:
Q  506 aaaaatca-attttcgggctacttgatcagattgctccgaaacttg 550  Q
    |||||||| |||||||| |||||||||| |||||||||||||||||    
T  33439413 aaaaatcagattttcggactacttgatcggattgctccgaaacttg 33439458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 394 - 454
Target Start/End: Original strand, 32025111 - 32025171
Alignment:
Q  394 cagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctt 454  Q
    |||||| |||| ||||||| ||| ||| ||  |||||| ||||||||||||||||||||||    
T  32025111 cagcaccaattctgaacatgtttgtaatataaatagtcgttttaaggacaatattaatctt 32025171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 127; Significance: 3e-65; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 372 - 570
Target Start/End: Complemental strand, 48776269 - 48776071
Alignment:
Q  372 aattatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggata 471  Q
    ||||||||||||| || | ||| |||||||||||||||||| ||||||||||||||||| |||||||||| |||||||||||| |||||||||||| |||    
T  48776269 aattatataatccaaattatattagcacaaattttgaacatgtttataacatggatagtgattttaaggataatattaatcttcctaactctcatgcata 48776170  T
Q  472 gtcattttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaacttggcattgaccataaaatcagg 570  Q
    ||||||||||||||||| |||||||| ||| ||||||| |  ||||||| ||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  48776169 gtcattttaggtcattgctagttgttcttagtcaaaaatttgattttcgagctacttaatcagattgctccgaaacttggcattggccataaaatcagg 48776071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 373 - 497
Target Start/End: Original strand, 48775712 - 48775834
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatag 472  Q
    |||||||||||||||||||||  ||||||||||| |||||  || ||||||| ||||||| ||||||||||||||||||||| |||||| ||||||||||    
T  48775712 attatataatccgaactgtat--gcacaaattttaaacatgcttgtaacatgaatagtcagtttaaggacaatattaatcttcctaactatcatggatag 48775809  T
Q  473 tcattttaggtcattgttagttgtt 497  Q
    |||||||||||||||||||||||||    
T  48775810 tcattttaggtcattgttagttgtt 48775834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 373 - 549
Target Start/End: Complemental strand, 42925698 - 42925523
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggat-a 471  Q
    |||||||||| ||||||||||||||||||||| | ||||| ||| |||||||||||||||||||| |||||||||||||||| |||||||||||   |      
T  42925698 attatataatacgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttcc 42925599  T
Q  472 gtcattttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
    ||  |||| | ||||||||| ||||| ||| ||||||| |   |||||||||||||||||| ||||||||||||||||    
T  42925598 gt--ttttggatcattgttacttgttcttagtcaaaaattgggttttcgggctacttgatcggattgctccgaaactt 42925523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 373 - 466
Target Start/End: Original strand, 9151898 - 9151991
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    |||||||||||||||||||||||||||||||| | ||||| ||| |||||||||||||||||||| |||||||||||||||| |||||||||||    
T  9151898 attatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcat 9151991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 373 - 466
Target Start/End: Complemental strand, 28230525 - 28230432
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    |||||||||||||||||||||||||||||||| | ||||| ||| |||||||||||||||||||| |||||||||||||||| |||||||||||    
T  28230525 attatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttatggacaatattaatcttcctaactctcat 28230432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 373 - 466
Target Start/End: Complemental strand, 31985574 - 31985481
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    |||||||||| |||||||||||| |||||||||| ||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  31985574 attatataattcgaactgtatcaacacaaattttaaacatatttttaacatgaatagtcattttatggacaatattaatctttctaactctcat 31985481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 373 - 466
Target Start/End: Complemental strand, 42865159 - 42865066
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    |||||||||||||||||||||||||||||||| | || || ||| |||||||||||||||||||| |||||||||||||||| |||||||||||    
T  42865159 attatataatccgaactgtatcagcacaaattctaaatatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcat 42865066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 372 - 549
Target Start/End: Original strand, 36408472 - 36408647
Alignment:
Q  372 aattatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggata 471  Q
    ||||||||||||||||||||||||||||||||| | ||||| ||| ||||||||||||| |||||| ||||||||||||||||  |||||||| |   |     
T  36408472 aattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtaattttagggacaatattaatcttcttaactctctt---tc 36408568  T
Q  472 gtc-attttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
     ||  |||| |||||||||||  |||| ||| ||||||| |   ||||||| |||||||||| ||||||||||||||||    
T  36408569 ttctgttttgggtcattgttacgtgttcttagtcaaaaatttggttttcggactacttgatcggattgctccgaaactt 36408647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 372 - 549
Target Start/End: Complemental strand, 36468595 - 36468420
Alignment:
Q  372 aattatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggata 471  Q
    ||||||||||||||||||||||||||||||||| | ||||| ||| |||||||||||||||||||| | ||||||||||||||  ||||||||||   |     
T  36468595 aattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttaggaacaatattaatcttcataactctcatcctt- 36468497  T
Q  472 gtcattttaggtcattgttagttgttattaatcaaaaaatc-aattttcgggctacttgatcagattgctccgaaactt 549  Q
        |||| |||||||||||  |||| ||| | ||||||||   |||||||||||||||||| ||||||||||||||||    
T  36468496 -ctgttttgggtcattgttacatgttcttagt-aaaaaatcgggttttcgggctacttgatcggattgctccgaaactt 36468420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 373 - 463
Target Start/End: Original strand, 5278366 - 5278456
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactct 463  Q
    ||||||||||| ||||||||| |||| ||||||||||||| ||| |||||||||||||||||||||||| |||||||||||| ||||||||    
T  5278366 attatataatctgaactgtattagcataaattttgaacatgtttgtaacatggatagtcattttaaggataatattaatcttcctaactct 5278456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 373 - 466
Target Start/End: Complemental strand, 24042245 - 24042152
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    |||||||||||||||||||||||||||||||| | ||||| ||| |||||| ||||||||||||| ||||||||| |||||| |||||||||||    
T  24042245 attatataatccgaactgtatcagcacaaattctaaacatgtttgtaacattgatagtcattttagggacaatatcaatcttcctaactctcat 24042152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 362 - 466
Target Start/End: Original strand, 3936199 - 3936303
Alignment:
Q  362 aaacagtcacaattatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaact 461  Q
    ||||||||  |||||||||||||||| ||||| |||||||||| | ||||| ||| ||||||||||| |||||||| |||||||||||||||| ||||||    
T  3936199 aaacagtccgaattatataatccgaaatgtattagcacaaattgtaaacatgtttgtaacatggataatcattttagggacaatattaatcttcctaact 3936298  T
Q  462 ctcat 466  Q
    |||||    
T  3936299 ctcat 3936303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 373 - 466
Target Start/End: Original strand, 1518809 - 1518902
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    |||||||||||||||||||||||||||||||| | ||||| ||| |||||| |||| |||||||| ||||||||||||||||  ||||||||||    
T  1518809 attatataatccgaactgtatcagcacaaattataaacatgtttgtaacatcgataatcattttatggacaatattaatcttcttaactctcat 1518902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 373 - 463
Target Start/End: Complemental strand, 3304815 - 3304725
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactct 463  Q
    |||||||||||||||||||||||||||||||  | ||||||||| ||||||| |||  ||||||| |||||||||||||||| ||||||||    
T  3304815 attatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtataaccattttagggacaatattaatcttcctaactct 3304725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 376 - 466
Target Start/End: Original strand, 43185887 - 43185977
Alignment:
Q  376 atataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    ||||||||| ||||||||||||||||||||| ||||| ||||||||||||||| |||||||  ||||||||||||  || |||||||||||    
T  43185887 atataatccaaactgtatcagcacaaattttaaacatgtttataacatggataatcattttttggacaatattaacattcctaactctcat 43185977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 373 - 463
Target Start/End: Original strand, 47202596 - 47202686
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactct 463  Q
    |||||||||||||||||||||||||||||||  | ||||||||| ||||||| |||| | ||||| |||||||||||||||| ||||||||    
T  47202596 attatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtatagccgttttagggacaatattaatcttcctaactct 47202686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 373 - 466
Target Start/End: Complemental strand, 24690391 - 24690298
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    ||||||||||| |||||||||||||| ||||||| | ||| ||| |||||||||| ||||||||| |||||||||||||||  |||||||||||    
T  24690391 attatataatctgaactgtatcagcataaattttaagcatgtttgtaacatggatcgtcattttatggacaatattaatctacctaactctcat 24690298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 373 - 549
Target Start/End: Complemental strand, 36946348 - 36946175
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatag 472  Q
    ||||||||| |||||||||||||||||||||| |||| || ||| ||||||| ||| ||||||||| ||||||||||| ||| |||||||||||   |      
T  36946348 attatataacccgaactgtatcagcacaaattctgaatatgtttgtaacatgaataatcattttaa-gacaatattaagcttcctaactctcatcctt-- 36946252  T
Q  473 tcattttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
    |  |||| ||||||||||||||||||||| ||||||      |||||||| |||||||||  |||||| ||||||||    
T  36946251 ttgttttgggtcattgttagttgttattagtcaaaattctggttttcgggatacttgatcgaattgcttcgaaactt 36946175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 373 - 466
Target Start/End: Complemental strand, 37518352 - 37518259
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    |||||||||||||||||||||||||| ||||| | ||||| ||| |||||  ||||||||||||| | ||| |||||||||| |||||||||||    
T  37518352 attatataatccgaactgtatcagcataaattctaaacatgtttgtaacagagatagtcattttaggaacactattaatcttcctaactctcat 37518259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 372 - 463
Target Start/End: Complemental strand, 33574101 - 33574010
Alignment:
Q  372 aattatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactct 463  Q
    |||||||||||| ||||||||| |||||||||  | ||||||||| ||||||| |||   |||||| |||||||||||||||||||||||||    
T  33574101 aattatataatctgaactgtatgagcacaaatcataaacatatttgtaacatgtataactattttagggacaatattaatctttctaactct 33574010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 256 - 360
Target Start/End: Original strand, 5278226 - 5278336
Alignment:
Q  256 aaaaaatgattttttcaccatttcaaattttataattcgaaaacctcaaaaaatatggcgttttcctt----tatttttc--cggattatagaatccgaa 349  Q
    ||||||||| |||||||||| |||| |||||||||| ||||||||| |||||||| ||||| ||||||    ||||||||  ||||||||||||||| ||    
T  5278226 aaaaaatgagtttttcaccaattcagattttataatccgaaaacctaaaaaaataaggcgtgttccttgatttatttttcttcggattatagaatccaaa 5278325  T
Q  350 caccccctaaa 360  Q
    |||||| ||||    
T  5278326 caccccttaaa 5278336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 373 - 466
Target Start/End: Original strand, 36629307 - 36629398
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    ||||||||||||||||||||||||| |||||||| ||||| ||| | |||||  | ||||||||| ||| |||||||||||| |||||||||||    
T  36629307 attatataatccgaactgtatcagcgcaaattttaaacatgtttgttacatg--tcgtcattttagggagaatattaatcttcctaactctcat 36629398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 373 - 466
Target Start/End: Complemental strand, 19225655 - 19225562
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    ||||||||||| |||| ||||||||||||||| | ||||| ||| ||||||||||| |||||||| |||  |||| |||||| |||||||||||    
T  19225655 attatataatctgaacggtatcagcacaaattctaaacatgtttgtaacatggatattcattttatggatgatataaatcttcctaactctcat 19225562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 386 - 466
Target Start/End: Complemental strand, 8214334 - 8214254
Alignment:
Q  386 aactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    ||||| |||| ||| |||| ||||||| |||  |||||||||||||||| ||||||||||||||||||| |||||||||||    
T  8214334 aactgcatcaacaccaattctgaacatgtttgcaacatggatagtcattctaaggacaatattaatcttcctaactctcat 8214254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 373 - 464
Target Start/End: Complemental strand, 6467197 - 6467106
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctc 464  Q
    ||||||||||||||||| ||||| ||||| || | ||||| ||| ||| ||||||||| ||||||||| |||||||||| || |||||||||    
T  6467197 attatataatccgaactatatcaacacaagttctaaacatgtttgtaatatggatagttattttaagggcaatattaattttcctaactctc 6467106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 379 - 466
Target Start/End: Complemental strand, 8214552 - 8214465
Alignment:
Q  379 taatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    |||||| ||||| | ||| || |||| ||||||| ||| |||||| ||| |||||||||||||||||||||||||| |||||||||||    
T  8214552 taatccaaactgcaccagaacgaattatgaacatgtttgtaacatcgattgtcattttaaggacaatattaatcttcctaactctcat 8214465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 373 - 463
Target Start/End: Original strand, 31643143 - 31643233
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactct 463  Q
    ||||||||||| |||||| ||||||| ||||  | ||||||||| ||||||| ||||  |||||| |||||||||||||||| ||||||||    
T  31643143 attatataatctgaactggatcagcataaatcctaaacatatttttaacatgtatagctattttagggacaatattaatcttcctaactct 31643233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 5731214 - 5731161
Alignment:
Q  401 aattttgaacatatttataacatggatagtcattttaaggacaatattaatctt 454  Q
    |||| ||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  5731214 aattctgaacatgtttataacatggatagtcatttgaaggacaatattaatctt 5731161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 373 - 549
Target Start/End: Complemental strand, 7115327 - 7115153
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatag 472  Q
    |||||||||| || || |||||| ||||||||||||   | ||| |||||||||||  || |||| ||||||||||||||||  ||||||||||   |      
T  7115327 attatataattcggaccgtatcaacacaaattttgagtttgtttctaacatggataaccaatttatggacaatattaatcttgataactctcatcctt-- 7115230  T
Q  473 tcattttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
      ||||| ||||||||||||||||| ||| |||||||     ||||||||||||||||||  ||||||| |||||||    
T  7115229 ctatttttggtcattgttagttgttcttagtcaaaaatcgtgttttcgggctacttgatcgtattgctctgaaactt 7115153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 385 - 466
Target Start/End: Original strand, 19818494 - 19818575
Alignment:
Q  385 gaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    ||||| |||||||||||||  | |||||  || ||||||||||||| |||||| |||||||||||||||| |||||||||||    
T  19818494 gaactctatcagcacaaatcctaaacatgcttgtaacatggatagttattttagggacaatattaatcttcctaactctcat 19818575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 373 - 466
Target Start/End: Original strand, 33151310 - 33151398
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    |||||||||| ||||||||||||||||||||| | ||||| ||| ||||||| |||||     || |||||||||||||||| |||||||||||    
T  33151310 attatataattcgaactgtatcagcacaaattctaaacatgtttgtaacatgaatagt-----tagggacaatattaatcttcctaactctcat 33151398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 476 - 549
Target Start/End: Complemental strand, 37398847 - 37398774
Alignment:
Q  476 ttttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
    |||||||||||||||||||||| ||| | ||||| ||  ||||  |||||||||||||||||||||||||||||    
T  37398847 ttttaggtcattgttagttgttcttagtaaaaaattcggtttttaggctacttgatcagattgctccgaaactt 37398774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 205 - 362
Target Start/End: Original strand, 39581656 - 39581813
Alignment:
Q  205 gattttcggattttagaatccaaacttagttttttcttcgttatgatatggaaaaaatgattttttcaccatttcaaattttataattcgaaaacctcaa 304  Q
    ||||| ||||||||||||| | |||| |||||||||||  |||||  ||  ||||||||| |||||||| | ||  ||||||||||| ||||||||| ||    
T  39581656 gatttacggattttagaattcgaactgagttttttctttattatgggataaaaaaaatgagtttttcacaaatttgaattttataatccgaaaaccttaa 39581755  T
Q  305 aaaatatggcgttttcctttatttttccggattatagaatccgaacaccccctaaaca 362  Q
    |||||| | ||  || |||  | ||| ||||||||||||| | |||||||| ||||||    
T  39581756 aaaataagacgcgttacttgctattttcggattatagaattcaaacaccccataaaca 39581813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 374 - 549
Target Start/End: Complemental strand, 48706055 - 48705882
Alignment:
Q  374 ttatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatagt 473  Q
    |||||||||| |||||||||||||||| ||| | | | ||||| ||||| |||||   | |||||| || ||||||||||| |||||||    ||||  |    
T  48706055 ttatataatctgaactgtatcagcacagattctaagcctatttttaacacggataactagtttaagtaccatattaatcttcctaactc----ggatctt 48705960  T
Q  474 cat--tttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
     ||  ||||||||||||||  ||||| | | | ||||| ||||||||||||||||||||||| |||| ||||||||||    
T  48705959 tatgttttaggtcattgtttattgttctcagtaaaaaattcaattttcgggctacttgatcatattgttccgaaactt 48705882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 255 - 362
Target Start/End: Complemental strand, 37218296 - 37218189
Alignment:
Q  255 gaaaaaatgattttttcaccatttcaaattttataattcgaaaacctcaaaaaatatggcgttttcctttatttttccggattatagaatccgaacaccc 354  Q
    |||||||||| || ||||||| |||  |||||||||| ||||||| |||||||||| |||   |||||| |||||| ||||||||| |||  ||||||||    
T  37218296 gaaaaaatgagttcttcaccaattcggattttataatccgaaaacttcaaaaaatagggcacattccttgattttttcggattatataatatgaacaccc 37218197  T
Q  355 cctaaaca 362  Q
    ||| ||||    
T  37218196 cctgaaca 37218189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 373 - 463
Target Start/End: Original strand, 8155001 - 8155091
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactct 463  Q
    |||||||||||  |||| |||||||||||||  | ||||||||| ||||||| |||| ||||||| ||||||||| |||||| ||| ||||    
T  8155001 attatataatctaaactctatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatatcaatcttcctagctct 8155091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 373 - 466
Target Start/End: Complemental strand, 16983799 - 16983706
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    ||||||||||| ||| |||||||||||||||||||    | ||| |||||||||||  || ||||  ||||||||||||||| |||||||||||    
T  16983799 attatataatctgaattgtatcagcacaaattttgggtctgtttgtaacatggataaccagtttacagacaatattaatcttcctaactctcat 16983706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 6467269 - 6467225
Alignment:
Q  318 ttcctttatttttccggattatagaatccgaacaccccctaaaca 362  Q
    |||||| |||||||||||||||||||||||||||||| |||||||    
T  6467269 ttccttgatttttccggattatagaatccgaacaccctctaaaca 6467225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 282 - 362
Target Start/End: Original strand, 48775577 - 48775657
Alignment:
Q  282 attttataattcgaaaacctcaaaaaatatggcgttttcctttatttttccggattatagaatccgaacaccccctaaaca 362  Q
    ||||||||||||||||||||||||||||| || |  || ||| || ||| |||||||| |||| |||||||||| ||||||    
T  48775577 attttataattcgaaaacctcaaaaaatagggtgcattacttgatgttttcggattatggaattcgaacaccccttaaaca 48775657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 418 - 452
Target Start/End: Original strand, 16278253 - 16278287
Alignment:
Q  418 taacatggatagtcattttaaggacaatattaatc 452  Q
    |||||||||||||||||||||||||||||||||||    
T  16278253 taacatggatagtcattttaaggacaatattaatc 16278287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 205 - 362
Target Start/End: Original strand, 30861021 - 30861178
Alignment:
Q  205 gattttcggattttagaatccaaacttagttttttcttcgttatgatatggaa-aaaatgattttttcaccatttcaaattttataattcgaaaacctca 303  Q
    ||||||||||||||||||||| || | ||||||| ||| |||||| | |  || |||| || ||||||| |  ||   |||||||||| ||||  |||||    
T  30861021 gattttcggattttagaatccgaattgagtttttcctttgttatggtgtaaaagaaaaagagtttttcatcgatttggattttataatccgaat-cctca 30861119  T
Q  304 aaaaatatggcgttttcctttatttttccggattatagaatccgaacaccccctaaaca 362  Q
    |||||||  | || ||||||  ||||| |||||||||||||||||||||||| ||||||    
T  30861120 aaaaatagtgtgtgttccttgcttttttcggattatagaatccgaacaccccataaaca 30861178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 408 - 465
Target Start/End: Complemental strand, 5730998 - 5730941
Alignment:
Q  408 aacatatttataacatggatagtcattttaaggacaatattaatctttctaactctca 465  Q
    ||||| ||| || |||| |||||||||||||  |||||||||||||||||||||||||    
T  5730998 aacatgtttgtagcatgaatagtcattttaaatacaatattaatctttctaactctca 5730941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 213 - 310
Target Start/End: Original strand, 43185720 - 43185817
Alignment:
Q  213 gattttagaatccaaacttagttttttcttcgttatgatatggaaaaaatgattttttcaccatttcaaattttataattcgaaaacctcaaaaaata 310  Q
    ||||||| ||||||| || ||||||| ||| |||||    || |||||| || |||||||||| ||| ||||||||||| ||||||| ||||||||||    
T  43185720 gattttaaaatccaatctgagtttttcctttgttatagggtgaaaaaaaagagtttttcaccaattcgaattttataatccgaaaacttcaaaaaata 43185817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 422 - 463
Target Start/End: Original strand, 43737233 - 43737274
Alignment:
Q  422 atggatagtcattttaaggacaatattaatctttctaactct 463  Q
    |||||||||||||||| |||||||||||||||| ||||||||    
T  43737233 atggatagtcattttagggacaatattaatcttcctaactct 43737274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 373 - 417
Target Start/End: Original strand, 6467800 - 6467844
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatattta 417  Q
    |||||||||||||||||||||||||| ||||||| ||||| ||||    
T  6467800 attatataatccgaactgtatcagcataaattttaaacatgttta 6467844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 379 - 431
Target Start/End: Original strand, 16278423 - 16278475
Alignment:
Q  379 taatccgaactgtatcagcacaaattttgaacatatttataacatggatagtc 431  Q
    |||||| |||||||||||||| |||| ||||||| ||| ||||||||||||||    
T  16278423 taatccaaactgtatcagcaccaattctgaacatgtttctaacatggatagtc 16278475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 515 - 549
Target Start/End: Complemental strand, 24690250 - 24690216
Alignment:
Q  515 ttttcgggctacttgatcagattgctccgaaactt 549  Q
    |||||||||||||||||| ||||||||||||||||    
T  24690250 ttttcgggctacttgatcggattgctccgaaactt 24690216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 515 - 549
Target Start/End: Original strand, 36629445 - 36629479
Alignment:
Q  515 ttttcgggctacttgatcagattgctccgaaactt 549  Q
    |||||||||||||||||| ||||||||||||||||    
T  36629445 ttttcgggctacttgatcggattgctccgaaactt 36629479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 326 - 362
Target Start/End: Complemental strand, 25613234 - 25613198
Alignment:
Q  326 tttttccggattatagaatccgaacaccccctaaaca 362  Q
    ||||| ||||||||||||||||| |||||||||||||    
T  25613234 ttttttcggattatagaatccgagcaccccctaaaca 25613198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 118; Significance: 7e-60; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 373 - 570
Target Start/End: Complemental strand, 8621695 - 8621499
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatag 472  Q
    ||||||||| ||||||||||||||||||||||| |||  | ||  ||||||||||| |||||||||||| ||||||||||||||||||||| |||||||     
T  8621695 attatataacccgaactgtatcagcacaaattt-gaatttgttcgtaacatggataatcattttaaggataatattaatctttctaactcttatggataa 8621597  T
Q  473 tcattttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaacttggcattgaccataaaatcagg 570  Q
    ||||||||||||||||||||||||| ||| |||||||  ||||||| | ||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  8621596 tcattttaggtcattgttagttgttcttagtcaaaaatccaatttttgagctacttgatcggattgctccgaaacttggcattggccataaaatcagg 8621499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 358 - 550
Target Start/End: Original strand, 3094772 - 3094962
Alignment:
Q  358 aaacaaacagtcacaattatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttct 457  Q
    |||||||||||  | ||||||||||| |||||||||||||||||||| | ||||| ||| ||||||||||| |||||||| |||||||||||||||| ||    
T  3094772 aaacaaacagttccgattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatggataatcattttatggacaatattaatcttcct 3094871  T
Q  458 aactctcatggatagtcattttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaacttg 550  Q
    |||||||||   |     |||| |||||||||||  |||| ||| |||||||   | ||||||| |||||||||| |||||||||||||||||    
T  3094872 aactctcatcctt--ctgttttgggtcattgttacatgttcttagtcaaaaatcgagttttcggactacttgatcggattgctccgaaacttg 3094962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 373 - 549
Target Start/End: Complemental strand, 27927998 - 27927824
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatag 472  Q
    |||||||||||||||||||||||||||||||| | ||||| ||| ||||||||||||||||||||  ||||||||||||||| |||||||||||   |      
T  27927998 attatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagagacaatattaatcttcctaactctcatcctt-- 27927901  T
Q  473 tcattttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
       |||| |||||||||||  |||| ||| | ||||| |   ||||||| |||||||||||||||||||||||||||    
T  27927900 ctgttttgggtcattgttacctgttcttagttaaaaattgggttttcggactacttgatcagattgctccgaaactt 27927824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 373 - 466
Target Start/End: Original strand, 28916877 - 28916970
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    |||||||||||||||||||||||||||||||| | ||||| ||| | |||||||||||||||||| ||||||||||||||||||||||||||||    
T  28916877 attatataatccgaactgtatcagcacaaattctaaacatgtttgttacatggatagtcattttagggacaatattaatctttctaactctcat 28916970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 391 - 549
Target Start/End: Original strand, 36980689 - 36980845
Alignment:
Q  391 tatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatagtcattttaggtcattgtt 490  Q
    |||||||||||||| ||||||| ||| ||||||||||| ||||||||||||||||||| |||||||||||||| ||   |    ||||| ||||||||||    
T  36980689 tatcagcacaaattatgaacatgtttgtaacatggataatcattttaaggacaatattgatctttctaactcttatcctt--ctattttgggtcattgtt 36980786  T
Q  491 agttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
    || | || ||| |||||||  | ||||||||||||||||||| ||||||||||||||||    
T  36980787 agctattcttagtcaaaaatccgattttcgggctacttgatcggattgctccgaaactt 36980845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 190 - 351
Target Start/End: Complemental strand, 8621927 - 8621767
Alignment:
Q  190 caaaaatgttcttaagattttcggattttagaatccaaacttagttttttcttcgttatgatatggaaaaaatgattttttcaccatttcaaattttata 289  Q
    |||||||||| | | ||||||||||||||||||||| ||   ||||||| ||| |||||||  || ||||||||| |||||||||| || ||||||||||    
T  8621927 caaaaatgttttgatgattttcggattttagaatccgaataaagtttttcctttgttatgaggtgaaaaaaatgaatttttcaccaatttaaattttata 8621828  T
Q  290 attcgaaaacctcaaaaaatatggcgttttcctttatttttccggattatagaatccgaaca 351  Q
    || ||||||||||||||||||| |||  ||  || |||||| ||||||||||||||||||||    
T  8621827 atacgaaaacctcaaaaaatatagcgcgttatttgattttt-cggattatagaatccgaaca 8621767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 373 - 466
Target Start/End: Complemental strand, 8885510 - 8885417
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    ||||||||||| |||||||||||||||||||| | ||||| ||| |||||||||||||||||||| |||||||||||||||| |||||||||||    
T  8885510 attatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcat 8885417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 373 - 549
Target Start/End: Original strand, 40392638 - 40392812
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatag 472  Q
    ||||||||||| | |||||||||||||||||| | ||||| ||| |||||||||||||||||||| |||||||||||||||| |||||||| ||   ||     
T  40392638 attatataatctgtactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttatggacaatattaatcttcctaactcttatcttta- 40392736  T
Q  473 tcattttaggtcattgttagttgttattaatcaaaaaatcaa-ttttcgggctacttgatcagattgctccgaaactt 549  Q
    | | ||| ||||||||||||||||| ||| || ||||||||| |||||  ||||||||||| |||| |||||||||||    
T  40392737 tga-tttgggtcattgttagttgttcttagtc-aaaaatcaagttttcaagctacttgatcggatttctccgaaactt 40392812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 373 - 462
Target Start/End: Original strand, 40994894 - 40994983
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactc 462  Q
    |||||||||||||||||||||||||||||||| | ||||| ||| |||||||||||||||||||| |||||||||||||||| |||||||    
T  40994894 attatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactc 40994983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 373 - 466
Target Start/End: Complemental strand, 42280948 - 42280855
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    ||||||||||| |||||||||||||||||||||| ||||| ||| ||||||| |||||||||||| |||||||||||||||| |||||||||||    
T  42280948 attatataatctgaactgtatcagcacaaattttaaacatgtttgtaacatgcatagtcattttagggacaatattaatcttcctaactctcat 42280855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 373 - 549
Target Start/End: Original strand, 36317894 - 36318072
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacat----atttataacatggatagtcattttaaggacaatattaatctttctaactctcatgg 468  Q
    ||||||||||| ||||||||| |||||||||| |||||||    |||| ||||||||||| |||||||||||||||||||||||||||||||||| ||      
T  36317894 attatataatctgaactgtattagcacaaattgtgaacatgttaatttgtaacatggataatcattttaaggacaatattaatctttctaactcttat-- 36317991  T
Q  469 atagtcattttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
     |    ||||| |||||||||||| |||| ||| ||| ||| || ||||||||||||||||||| ||| | ||| ||||||    
T  36317992 ctttcaattttgggtcattgttagctgttcttagtcagaaattcgattttcgggctacttgatcggatagttccaaaactt 36318072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 372 - 467
Target Start/End: Original strand, 16310700 - 16310795
Alignment:
Q  372 aattatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatg 467  Q
    |||||||||||||||||| |||||||||||||| | ||||| ||| ||||||| |||||||||||| |||||||||||||||| ||||||||||||    
T  16310700 aattatataatccgaactatatcagcacaaattctaaacatgtttgtaacatgaatagtcattttagggacaatattaatcttcctaactctcatg 16310795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 372 - 467
Target Start/End: Original strand, 37248659 - 37248754
Alignment:
Q  372 aattatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatg 467  Q
    |||||||||||||||| |||||||||||||||| | ||||| ||| | |||||||||||||||||| |||||||||||||||| ||||||||||||    
T  37248659 aattatataatccgaattgtatcagcacaaattctaaacatgtttgttacatggatagtcattttagggacaatattaatcttcctaactctcatg 37248754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 373 - 466
Target Start/End: Original strand, 34853430 - 34853523
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    |||||||||||| ||||||||||||||||||| | || || ||| |||||||||||||||||||| |||||||||||||||| |||||||||||    
T  34853430 attatataatccaaactgtatcagcacaaattctaaaaatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcat 34853523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 373 - 465
Target Start/End: Original strand, 7982480 - 7982572
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctca 465  Q
    ||||||||||| |||||||||| ||||||||||||||||| ||| ||||||  ||||||||||||||||||||||||||||| | ||||||||    
T  7982480 attatataatctgaactgtatcggcacaaattttgaacatgtttgtaacataaatagtcattttaaggacaatattaatcttcccaactctca 7982572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 373 - 466
Target Start/End: Original strand, 9073606 - 9073699
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    ||||||||| ||||||||||| |||||||||| | ||||| ||| |||||||||||||||||||| |||||||||||||||| |||| ||||||    
T  9073606 attatataacccgaactgtattagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaagtctcat 9073699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 373 - 549
Target Start/End: Complemental strand, 11698373 - 11698199
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatag 472  Q
    |||||||||| ||||||||||||||| ||||| | | ||| ||| |||||||||||||||||||| ||| |||||||||||| |||||||||||   |      
T  11698373 attatataattcgaactgtatcagcagaaattctaagcatgtttttaacatggatagtcattttagggataatattaatcttcctaactctcatcctt-- 11698276  T
Q  473 tcattttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
     | |||| |||||||||||  |||| ||| |||||||     |||||||||||||||||| || |||||||||||||    
T  11698275 ccgtttttggtcattgttatctgttcttagtcaaaaatcgggttttcgggctacttgatcggaatgctccgaaactt 11698199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 373 - 466
Target Start/End: Complemental strand, 14164114 - 14164021
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    ||||||||||| ||| |||||||||||||||| | ||||| ||| |||||||||||||||||||| ||||||||||||| || |||||||||||    
T  14164114 attatataatctgaaatgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaattttcctaactctcat 14164021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 373 - 466
Target Start/End: Complemental strand, 36165895 - 36165802
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    |||||||||||||||||||||||||||||||| | ||||| ||| ||||||||||||| ||||||  |||||||||||||||  ||||||||||    
T  36165895 attatataatccgaactgtatcagcacaaattgtaaacatgtttgtaacatggatagttattttagagacaatattaatcttcttaactctcat 36165802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 373 - 466
Target Start/End: Original strand, 44106325 - 44106418
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    ||||||||||| |||||||||||||||||||| | ||||| ||| |||||||||||||||||  | |||||||||||||||| |||||||||||    
T  44106325 attatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattccatggacaatattaatcttcctaactctcat 44106418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 375 - 549
Target Start/End: Original strand, 7981618 - 7981790
Alignment:
Q  375 tatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatagtc 474  Q
    |||| |||| |||||||| || |||||||||||||||| ||| ||||||||||| | |||||||||||||| ||||  || ||||| |||||   |        
T  7981618 tatagaatctgaactgtaccaacacaaattttgaacatgtttgtaacatggatatttattttaaggacaatgttaagtttcctaaccctcatccttctg- 7981716  T
Q  475 attttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
     |||| ||| ||||||||||||||||||| |||||  |||||||| |||||||||||| ||||||| ||||||||    
T  7981717 -ttttgggttattgttagttgttattaattaaaaatgcaattttcaggctacttgatcggattgcttcgaaactt 7981790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 407 - 497
Target Start/End: Complemental strand, 7965993 - 7965903
Alignment:
Q  407 gaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatagtcattttaggtcattgttagttgtt 497  Q
    |||||| ||| ||||||||||||||| ||||||||||||| || |||| |||||||||| | |||||||||||||||| ||||||||||||    
T  7965993 gaacatgtttgtaacatggatagtcactttaaggacaatactagtcttcctaactctcacgaatagtcattttaggtccttgttagttgtt 7965903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 373 - 466
Target Start/End: Complemental strand, 4259692 - 4259599
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    ||||||||||| |||||||||||||||||||| | | ||| ||| |||||| ||||||||||||| |||||||||||||||| |||||| ||||    
T  4259692 attatataatctgaactgtatcagcacaaattctaagcatgtttgtaacattgatagtcattttatggacaatattaatcttcctaactatcat 4259599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 373 - 466
Target Start/End: Complemental strand, 17119936 - 17119843
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    ||||||||||| ||| |||||||||||||||| | || || ||| |||||||||| ||||||||| |||||||||||||||| |||||||||||    
T  17119936 attatataatctgaattgtatcagcacaaattctaaatatgtttgtaacatggattgtcattttacggacaatattaatcttcctaactctcat 17119843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 373 - 549
Target Start/End: Complemental strand, 31519949 - 31519775
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatag 472  Q
    |||||||||||||||||||||||||||||||  | || ||| || ||||||| |||| ||||||| |||||||||||||||| |||||||  ||   |      
T  31519949 attatataatccgaactgtatcagcacaaatcctaaatataattgtaacatgtatagccattttagggacaatattaatcttcctaactcgtatcctt-- 31519852  T
Q  473 tcattttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
    |  |||| ||||||||||| ||||| ||| |||||||     |||||||||||||||||| |||||||| |||||||    
T  31519851 ttgtttttggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaactt 31519775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 373 - 466
Target Start/End: Original strand, 33472380 - 33472473
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    |||| ||||||| ||||| |||| ||| |||| ||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  33472380 attacataatccaaactgcatcatcaccaattctgaacatgtttgtaacatggatagtcattttaaggacaatattaatcttcctaactatcat 33472473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 394 - 462
Target Start/End: Complemental strand, 31234554 - 31234486
Alignment:
Q  394 cagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactc 462  Q
    |||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  31234554 cagcaccaattctgaacatatttgtaacatggatagtcattttaaggacaatattaatcttcctaactc 31234486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 372 - 466
Target Start/End: Original strand, 33472172 - 33472266
Alignment:
Q  372 aattatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    ||||| ||||||| ||||| |  ||||| |||| | ||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  33472172 aattacataatccaaactgcacaagcaccaattcttaacatgtttgtaacatggatagtcattttaaggacaatattaatcttcctaactctcat 33472266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 400 - 464
Target Start/End: Original strand, 9845315 - 9845379
Alignment:
Q  400 aaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctc 464  Q
    ||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||||    
T  9845315 aaattatgaacatgtttgtaacatggatagtcattttaaggacaatattaatcttcctaactctc 9845379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 394 - 466
Target Start/End: Complemental strand, 10833551 - 10833479
Alignment:
Q  394 cagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    |||||| |||| ||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  10833551 cagcaccaattctgaacatgtttgtaacatggatagtcattttaaggacaatattaatcttcctaactttcat 10833479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 256 - 362
Target Start/End: Original strand, 36980556 - 36980661
Alignment:
Q  256 aaaaaatgattttttcaccatttcaaattttataattcgaaaacctcaaaaaatatggcgttttcctttatttttccggattatagaatccgaacacccc 355  Q
    |||||| || |||||||||| |||| |||||||||  |||||||||||||||||| ||| | || ||| |||||| |||||||||| ||||||||| |||    
T  36980556 aaaaaaagagtttttcaccaattcagattttataaaccgaaaacctcaaaaaatagggcatgtttcttgattttttcggattatagcatccgaaca-ccc 36980654  T
Q  356 ctaaaca 362  Q
    |||||||    
T  36980655 ctaaaca 36980661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 190 - 355
Target Start/End: Complemental strand, 7966285 - 7966120
Alignment:
Q  190 caaaaatgttcttaagattttcggattttagaatccaaacttagttttttcttcgttatgatatggaaaaaatgattttttcaccatttcaaattttata 289  Q
    |||||||||  || |||||||||||||||| ||| | |||| ||||||| ||| ||||||  ||| ||||||||| ||||||||||  ||  |||||| |    
T  7966285 caaaaatgtcattgagattttcggattttaaaattcgaactgagtttttcctttgttatgggatgaaaaaaatgagtttttcaccaaatcggattttaga 7966186  T
Q  290 attcgaaaacctcaaaaaatatggcgttttcctttatttttccggattatagaatccgaacacccc 355  Q
    |  ||||||  |||||||||| ||||| || ||| | ||||  ||||||||||||||| |||||||    
T  7966185 acccgaaaatatcaaaaaatagggcgtgttacttgaattttttggattatagaatccgtacacccc 7966120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 372 - 547
Target Start/End: Original strand, 6395185 - 6395358
Alignment:
Q  372 aattatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggata 471  Q
    ||||||||||||  || ||||||||||| ||||  |||| | ||| || |||||||| |||||||| |||||||||||| ||| |||||||||||   |     
T  6395185 aattatataatcttaattgtatcagcaccaattccgaacttttttgtagcatggatattcattttatggacaatattaaacttcctaactctcat---tc 6395281  T
Q  472 gtc-attttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaac 547  Q
     ||  ||||||||||||||||| ||||  || |||||||    ||||||||||||||||||| ||||| || |||||    
T  6395282 ttctgttttaggtcattgttagctgttcgtagtcaaaaatctgattttcgggctacttgatcggattgttctgaaac 6395358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 372 - 549
Target Start/End: Original strand, 28423522 - 28423696
Alignment:
Q  372 aattatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggata 471  Q
    |||||||||||| |||||| ||||  ||||||| | ||||| ||| ||||||||||   |||||||  ||||||||||||||| |||||||||||   |     
T  28423522 aattatataatctgaactgcatcactacaaattctaaacatgtttgtaacatggatgaacattttacagacaatattaatcttcctaactctcatcctt- 28423620  T
Q  472 gtcattttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
       |||||  ||||||| |||||||| ||| ||||||| |   |||||||||||||||||| |||| |||||||||||    
T  28423621 -ctattttgcgtcattg-tagttgttcttagtcaaaaattagtttttcgggctacttgatcggattactccgaaactt 28423696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 373 - 549
Target Start/End: Original strand, 1374042 - 1374216
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatag 472  Q
    ||||| ||||||||||| ||||| |||||||| | | ||| ||| ||| |||||||||||  ||||| || ||||||||| |||||||||||||   ||     
T  1374042 attatgtaatccgaactatatcatcacaaattataagcatgtttgtaatatggatagtcagattaagaactatattaatcattctaactctcatcctta- 1374140  T
Q  473 tcattttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
       |||||||||||||||||||||| | | ||||||| |    |||| | ||||||||||| |||||||| ||||||    
T  1374141 -tgttttaggtcattgttagttgttttcattcaaaaatttggatttcagactacttgatcaaattgctccaaaactt 1374216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 41530805 - 41530858
Alignment:
Q  401 aattttgaacatatttataacatggatagtcattttaaggacaatattaatctt 454  Q
    |||||||||||| ||| |||||||||||||||||| ||||||||||||||||||    
T  41530805 aattttgaacatgtttgtaacatggatagtcatttcaaggacaatattaatctt 41530858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 374 - 454
Target Start/End: Original strand, 1076659 - 1076738
Alignment:
Q  374 ttatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctt 454  Q
    |||||||||||||| ||||| |||||||||||| ||||| ||| ||||||| |||  ||||||| ||||||||||||||||    
T  1076659 ttatataatccgaattgtat-agcacaaattttaaacatgtttgtaacatgaatatccattttatggacaatattaatctt 1076738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 394 - 454
Target Start/End: Original strand, 24627697 - 24627757
Alignment:
Q  394 cagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctt 454  Q
    |||||| |||| |||| || ||| |||||||||||||||||||||||||||||||||||||    
T  24627697 cagcaccaattctgaatatgtttgtaacatggatagtcattttaaggacaatattaatctt 24627757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 256 - 362
Target Start/End: Original strand, 33472036 - 33472142
Alignment:
Q  256 aaaaaatgattttttcaccatttcaaattttataattcgaaaacctcaaaaaatatggcgttttcctttatttttccggattatagaatccgaacacccc 355  Q
    ||||||||| |||||||||| |||  ||| |||||| |||||||||||||||||| ||||   |  || |||||| ||||||||||||||  | ||||||    
T  33472036 aaaaaatgagtttttcaccaattcggattctataatccgaaaacctcaaaaaatagggcgcgctatttgattttttcggattatagaatctaaccacccc 33472135  T
Q  356 ctaaaca 362  Q
    |||||||    
T  33472136 ctaaaca 33472142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 483 - 549
Target Start/End: Original strand, 41876707 - 41876773
Alignment:
Q  483 tcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
    |||||||||||||||  || || |||| ||| ||||||||||||||||||| |||||||||||||||    
T  41876707 tcattgttagttgtttctagtcgaaaattcagttttcgggctacttgatcatattgctccgaaactt 41876773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 389 - 466
Target Start/End: Original strand, 40328015 - 40328092
Alignment:
Q  389 tgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    |||||||||| ||||  | ||||| ||| |||||||||| ||||||||| ||| |||||||||||| |||||||||||    
T  40328015 tgtatcagcataaatactaaacatgtttgtaacatggattgtcattttatggataatattaatcttcctaactctcat 40328092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 390 - 549
Target Start/End: Original strand, 21004503 - 21004660
Alignment:
Q  390 gtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatagtcattttaggtcattgt 489  Q
    ||||||| ||||||  | ||||||||| ||||||| |||| ||||||| ||||||||||||||||  ||||||| ||   |  |  |||| |||||||||    
T  21004503 gtatcagtacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcataactcttatcctt--ttgttttgggtcattgt 21004600  T
Q  490 tagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
    ||  |||| ||| |||||||     ||||| ||||||||||||||||||||| |||||||    
T  21004601 tacatgttcttagtcaaaaatcgggttttccggctacttgatcagattgctctgaaactt 21004660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 310
Target Start/End: Complemental strand, 28219271 - 28219151
Alignment:
Q  190 caaaaatgttcttaagattttcggattttagaatccaaacttagttttttcttcgttatgatatggaaaaaatgattttttcaccatttcaaattttata 289  Q
    ||||||||||| |  |||||| |||||||| ||||| || | ||||||| ||| ||||||   || ||||||||| ||||||| || ||   ||||||||    
T  28219271 caaaaatgttcatgtgattttgggattttataatccgaattgagtttttcctttgttatggggtgaaaaaaatgagtttttcaacaatttggattttata 28219172  T
Q  290 attcgaaaacctcaaaaaata 310  Q
    || ||||||||||||||||||    
T  28219171 atccgaaaacctcaaaaaata 28219151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 395 - 454
Target Start/End: Complemental strand, 31234764 - 31234705
Alignment:
Q  395 agcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctt 454  Q
    ||||| |||| ||||||| ||  |||||||||| ||||||||||||||||||||||||||    
T  31234764 agcaccaattctgaacatgttcgtaacatggatcgtcattttaaggacaatattaatctt 31234705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 373 - 451
Target Start/End: Original strand, 9845495 - 9845573
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaat 451  Q
    |||| ||||||| |||||  ||||||| |||| | ||||| ||| ||||||||||| ||||||||||| ||||||||||    
T  9845495 attacataatccaaactgcgtcagcaccaattctaaacatgtttgtaacatggatactcattttaagggcaatattaat 9845573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 255 - 358
Target Start/End: Complemental strand, 10840947 - 10840848
Alignment:
Q  255 gaaaaaatgattttttcaccatttcaaattttataattcgaaaacctcaaaaaatatggcgttttcctttatttttccggattatagaatccgaacaccc 354  Q
    ||||||||||  ||| ||||| |||  |||||||||| |||||||||||||||||| ||||  || |||| |||||    |||||||||||||||||||     
T  10840947 gaaaaaatgaggtttccaccaattcggattttataatccgaaaacctcaaaaaatagggcgcattacttttttttt----attatagaatccgaacacct 10840852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 392 - 454
Target Start/End: Original strand, 24627903 - 24627965
Alignment:
Q  392 atcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctt 454  Q
    |||| ||| |||| ||||||| ||| |||||| |||||||||||||| |||||||||||||||    
T  24627903 atcaacaccaattctgaacatgtttgtaacattgatagtcattttaatgacaatattaatctt 24627965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 373 - 466
Target Start/End: Complemental strand, 10840814 - 10840721
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    |||||||| | |||| ||||| |||||||||| |||   | ||| |||||||||||  || | ||||||||||||||||||| |||||||||||    
T  10840814 attatatatttcgaattgtattagcacaaattctgagtttttttgtaacatggataaccagtgtaaggacaatattaatcttcctaactctcat 10840721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 235 - 362
Target Start/End: Complemental strand, 4259848 - 4259720
Alignment:
Q  235 tttttcttcgttatgatatggaaaaaatgattttttcaccatttcaaattttataattcgaaaacctcaaaaaa-tatggcgttttcctttatttttccg 333  Q
    |||| ||| ||||| | ||| ||||||||| || |||| || |||| ||||||||||   ||||| |||||||| || ||||| |||||| |||||| ||    
T  4259848 ttttcctttgttataagatgaaaaaaatgagttcttcatcaattcagattttataatataaaaacttcaaaaaaatagggcgtgttccttgattttttcg 4259749  T
Q  334 gattatagaatccgaacaccccctaaaca 362  Q
    ||||||| |||  || |||||||||||||    
T  4259748 gattatataatttgagcaccccctaaaca 4259720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 418 - 466
Target Start/End: Original strand, 34645524 - 34645572
Alignment:
Q  418 taacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    |||||| ||||||||||||||||| ||| ||||| ||||||||||||||    
T  34645524 taacatagatagtcattttaaggataattttaatttttctaactctcat 34645572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 362
Target Start/End: Original strand, 24627605 - 24627642
Alignment:
Q  325 atttttccggattatagaatccgaacaccccctaaaca 362  Q
    |||||| |||||||||||||||||| ||||||||||||    
T  24627605 attttttcggattatagaatccgaataccccctaaaca 24627642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 362
Target Start/End: Complemental strand, 31234854 - 31234817
Alignment:
Q  325 atttttccggattatagaatccgaacaccccctaaaca 362  Q
    |||||| |||||||||||||||||||| ||||||||||    
T  31234854 attttttcggattatagaatccgaacaacccctaaaca 31234817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 373 - 449
Target Start/End: Complemental strand, 32504360 - 32504284
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatatta 449  Q
    ||||||||||  ||||| ||||||||||||||||||| || ||| ||||||| |||  || ||||| ||| ||||||    
T  32504360 attatataatatgaactatatcagcacaaattttgaatatgtttgtaacatgtataaccaatttaatgaccatatta 32504284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 107; Significance: 3e-53; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 373 - 566
Target Start/End: Complemental strand, 60027 - 59836
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatag 472  Q
    ||||||||||  |||||||| ||||||||||||||||||| ||| |||||| |||||||||||||| ||||||||||||||| |||||||  ||||||||    
T  60027 attatataatatgaactgtaccagcacaaattttgaacatgtttgtaacatagatagtcattttaaagacaatattaatcttcctaactc--atggatag 59930  T
Q  473 tcattttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaacttggcattgaccataaaat 566  Q
    ||||||||||||||||||||  ||| ||| ||||||| |  ||||||||| |||||||||||||| |||||||||||||| ||| |||||||||    
T  59929 tcattttaggtcattgttagccgttcttagtcaaaaatttgattttcgggttacttgatcagatttctccgaaacttggccttggccataaaat 59836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 383 - 497
Target Start/End: Original strand, 59472 - 59584
Alignment:
Q  383 ccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatagtcattttagg 482  Q
    ||||||| |||||| ||||||||| ||||| ||| | ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  59472 ccgaactatatcagtacaaattttaaacatgtttgtgacatggatagtcattttaaggacaatattaatctttctaa--ctcatggatagtcattttagg 59569  T
Q  483 tcattgttagttgtt 497  Q
    |||||||||||||||    
T  59570 tcattgttagttgtt 59584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 90; Significance: 4e-43; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 372 - 549
Target Start/End: Complemental strand, 3561393 - 3561218
Alignment:
Q  372 aattatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggata 471  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||| |||||| |||||| |||||||||||| ||||||||||||||||||||||  ||     
T  3561393 aattatataatccgaactgtatcagcacaaattatgaacatgtttgtaacatagatagtaattttaaggacagtattaatctttctaactctcat-catt 3561295  T
Q  472 gtcattttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
     |  |||||||||||||||||||||| ||| |||||||  | || || ||| ||||||||||||||||||||||||||    
T  3561294 ct-gttttaggtcattgttagttgttcttagtcaaaaatccgatctttgggttacttgatcagattgctccgaaactt 3561218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 372 - 549
Target Start/End: Original strand, 17000479 - 17000655
Alignment:
Q  372 aattatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggat- 470  Q
    |||||||||||| || ||||||||||||||||| | ||||| ||| |||||||||||||||||||| |||||||||||||||| |||||||||||   |     
T  17000479 aattatataatctgagctgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttc 17000578  T
Q  471 agtcattttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
     ||  |||| |||||||||||  |||| ||| |||||||   |||||||||||||||||||  ||||||||||||||||    
T  17000579 cgt--ttttgggtcattgttacctgttcttagtcaaaaatcgaattttcgggctacttgattggattgctccgaaactt 17000655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 380 - 550
Target Start/End: Complemental strand, 41584715 - 41584547
Alignment:
Q  380 aatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatagtcatttt 479  Q
    ||||||||||||||||||||||||| | ||||| ||| |||||||||||||||||||| |||||||||||||||| |||||||||||   |     ||||    
T  41584715 aatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttatggacaatattaatcttcctaactctcatcctt--ctgtttt 41584618  T
Q  480 aggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaacttg 550  Q
     |||||||||||  |||| ||| |||||||     |||||||||||||||||| |||||||||||||||||    
T  41584617 gggtcattgttacatgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctccgaaacttg 41584547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 380 - 549
Target Start/End: Complemental strand, 45567940 - 45567773
Alignment:
Q  380 aatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatagtcatttt 479  Q
    ||||||||||||||||||||||||| | ||||| ||| ||| |||||||||||||||| ||||||||||||||||||||||||||||  ||  |  ||||    
T  45567940 aatccgaactgtatcagcacaaattctaaacatgtttgtaatatggatagtcattttagggacaatattaatctttctaactctcatccat--ttgtttt 45567843  T
Q  480 aggtcattgttagttgttattaatcaaaaaatc-aattttcgggctacttgatcagattgctccgaaactt 549  Q
     |||||||||||  |||| ||| | ||||||||   ||||||| |||||||||| ||||||||||||||||    
T  45567842 gggtcattgttacctgttcttagt-aaaaaatcgggttttcggactacttgatcggattgctccgaaactt 45567773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 373 - 466
Target Start/End: Complemental strand, 15069898 - 15069805
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    |||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||  ||||||||||||||| |||||| ||||    
T  15069898 attatataatccgaactgtatcagcacaaattttaaacatgtttgtaacatggatagtcattttagagacaatattaatcttactaactttcat 15069805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 373 - 547
Target Start/End: Original strand, 7011312 - 7011484
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatag 472  Q
    |||||||||||||||||||||||||| ||||| | ||||| ||| |||||||||||||||||||| ||||||||||||||||  ||||||||||   |      
T  7011312 attatataatccgaactgtatcagcaaaaattctaaacatgtttctaacatggatagtcattttagggacaatattaatcttcttaactctcatcctt-- 7011409  T
Q  473 tcattttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaac 547  Q
       |||||||||||||| |  |||| ||| |||||||     |||||||||||||||||| ||||||||||||||    
T  7011410 ctgttttaggtcattgtaacctgtttttagtcaaaaatcgggttttcgggctacttgatcggattgctccgaaac 7011484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 372 - 549
Target Start/End: Complemental strand, 34162780 - 34162604
Alignment:
Q  372 aattatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggat- 470  Q
    ||||||||||||||||||||||||||||||||| | ||||| ||| |||||||||||| ||||||| |||||||||||||||| |||||||  ||   |     
T  34162780 aattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagccattttagggacaatattaatcttcctaactcctatccttc 34162681  T
Q  471 agtcattttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
     ||  |||| |||||||||||  |||| ||| |||||||   |||||||||||||||||||  | ||||||||||||||    
T  34162680 cgt--ttttgggtcattgttacatgttcttagtcaaaaatcgaattttcgggctacttgattggtttgctccgaaactt 34162604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 372 - 466
Target Start/End: Original strand, 27794932 - 27795026
Alignment:
Q  372 aattatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    |||||||||||| ||||||||||||| |||||||| ||||| |||||||||| ||||||||||||| |||||||||||||||| |||||| ||||    
T  27794932 aattatataatctgaactgtatcagcgcaaattttaaacatgtttataacatagatagtcattttatggacaatattaatcttcctaactatcat 27795026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 377 - 550
Target Start/End: Complemental strand, 45046903 - 45046732
Alignment:
Q  377 tataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatagtcat 476  Q
    |||||||||||||||||||||||||||| | ||||| ||| |||||||||||||||||| | |||||||||||||||| |||||||||||   |     |    
T  45046903 tataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcatttcagggacaatattaatcttcctaactctcatcctt--ctgt 45046806  T
Q  477 tttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaacttg 550  Q
    ||| |||||||||||  |||| ||| | |||||     |||||||||||||||||| |||||||||||||||||    
T  45046805 tttgggtcattgttacctgttcttagttaaaaaccgggttttcgggctacttgatcggattgctccgaaacttg 45046732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 373 - 462
Target Start/End: Complemental strand, 32817668 - 32817579
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactc 462  Q
    |||||||||||||||||||||||||||||||  | ||||| ||| |||||||||||||||||||| |||||||||||||||| |||||||    
T  32817668 attatataatccgaactgtatcagcacaaatcctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactc 32817579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 373 - 466
Target Start/End: Original strand, 42546069 - 42546162
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    |||||||||||||||||||||||||||||||| | ||||| ||| ||||||||||||||||||||  || |||||||||| |||||||||||||    
T  42546069 attatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagagataatattaatcattctaactctcat 42546162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 205 - 357
Target Start/End: Original strand, 890426 - 890578
Alignment:
Q  205 gattttcggattttagaatccaaacttagttttttcttcgttatgatatggaaaaaatgattttttcaccatttcaaattttataattcgaaaacctcaa 304  Q
    ||||||| ||||||||||||| |||  | ||||||||| ||||||   || ||||||||| |||||||| | |||  |||||||||| ||||||||||||    
T  890426 gattttcagattttagaatccgaaccgaattttttctttgttatggggtgaaaaaaatgactttttcacgaattcggattttataatccgaaaacctcaa 890525  T
Q  305 aaaatatggcgttttcctttatttttccggattatagaatccgaacaccccct 357  Q
    |||||| ||||| |||| |  ||||| ||||||||||||||| ||||||||||    
T  890526 aaaatagggcgtgttccctgcttttttcggattatagaatcccaacaccccct 890578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 373 - 549
Target Start/End: Complemental strand, 24472884 - 24472710
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatag 472  Q
    ||||||||||||||||| ||| |||||||||||| ||||| ||| |||||||||||||||||||||||| |||||||| ||| |||||| ||||   |      
T  24472884 attatataatccgaactatattagcacaaattttaaacatgtttgtaacatggatagtcattttaaggaaaatattaagcttcctaactatcat---tct 24472788  T
Q  473 tc-attttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
    ||  |||| |||||||||||| |||| ||| |||||||   |||||  |||| |||||||  ||||||||||||||||    
T  24472787 tctgtttttggtcattgttagctgttcttagtcaaaaatcgaatttgtgggcaacttgattggattgctccgaaactt 24472710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 405 - 549
Target Start/End: Complemental strand, 25563439 - 25563297
Alignment:
Q  405 ttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatagtcattttaggtcattgttagttgttattaatc 504  Q
    |||||||| ||| ||| ||||||||||||||||||||||||||||| |||  |||| |||||   |  |  |||||||||||||||||||||||||| ||    
T  25563439 ttgaacatgtttgtaatatggatagtcattttaaggacaatattaagcttcataaccctcatcctt--ttgttttaggtcattgttagttgttattagtc 25563342  T
Q  505 aaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
    |||||  | || |||| ||||||||||| ||||||||||||||||    
T  25563341 aaaaatccgatattcgagctacttgatcggattgctccgaaactt 25563297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 373 - 549
Target Start/End: Complemental strand, 33611467 - 33611293
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatag 472  Q
    |||||||||||||||||||||||||||||||  | ||||||||| ||||||| |||| |||||||||||||||||| ||||| |||| ||| ||   |      
T  33611467 attatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttaaggacaatatttatcttcctaaatcttatcctt-- 33611370  T
Q  473 tcattttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
    |  |||| |||||||||||  |||| ||| |||||||     |||||||||||||||||| |||||||| |||||||    
T  33611369 ttgttttgggtcattgttacctgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaactt 33611293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 373 - 466
Target Start/End: Complemental strand, 44573153 - 44573061
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    ||||||||||| ||||||||| |||||||||| | ||||| ||| ||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  44573153 attatataatctgaactgtat-agcacaaattataaacatgtttgtaacatgaatagtcattttagggacaatattaatctttctaactctcat 44573061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 373 - 466
Target Start/End: Original strand, 49677585 - 49677678
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    |||||||||||||||||||||||||| ||||| | | ||| ||| |||||| ||||||||||||| |||||||||||||||| |||||||||||    
T  49677585 attatataatccgaactgtatcagcataaattctaaccatgtttgtaacatagatagtcattttagggacaatattaatcttcctaactctcat 49677678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 373 - 549
Target Start/End: Complemental strand, 52744900 - 52744726
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatag 472  Q
    |||| |||||| |||||||||||||||||||  | ||||| ||| |||||||||||||||||||| | |||| ||||||||| |||||||||||   |      
T  52744900 attaaataatctgaactgtatcagcacaaatgctaaacatgtttgtaacatggatagtcattttaggaacaacattaatcttcctaactctcatcctt-- 52744803  T
Q  473 tcattttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
       |||| ||||||||||| ||||| ||| ||||||| |   ||||||| |||||||||| ||||||||||||||||    
T  52744802 ctgttttgggtcattgttacttgttcttagtcaaaaattgggttttcggactacttgatcggattgctccgaaactt 52744726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 373 - 549
Target Start/End: Complemental strand, 40650732 - 40650558
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatag 472  Q
    ||||||| ||| |||||||||||||||||||| | | ||| ||| ||||||||||| |||||||| |||||||||||||||| |||||||||||   |      
T  40650732 attatatgatctgaactgtatcagcacaaattataaccatgtttgtaacatggataatcattttagggacaatattaatcttcctaactctcat-ccttc 40650634  T
Q  473 tcattttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
    ||  ||| |||||||||||  |||| ||| | |||||   | |||||||||||||||||| ||||||||||||||||    
T  40650633 tc-gtttgggtcattgttacctgttcttagttaaaaaccgagttttcgggctacttgatcggattgctccgaaactt 40650558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 379 - 454
Target Start/End: Complemental strand, 9446146 - 9446071
Alignment:
Q  379 taatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctt 454  Q
    |||||||||| ||| |||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  9446146 taatccgaacagtaccagcaccaattctgaacatgtttataacatggatagtcattttaaggacaatattaatctt 9446071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 373 - 549
Target Start/End: Original strand, 34006362 - 34006537
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaagg-acaatattaatctttctaactctcatggata 471  Q
    |||||||||||| || ||||| |||||||||||| || || ||| |||||||||||||||||||| || |||||||||||||| |||||||||||   |     
T  34006362 attatataatccaaattgtattagcacaaattttaaagatgtttgtaacatggatagtcattttagggaacaatattaatcttcctaactctcatcctt- 34006460  T
Q  472 gtcattttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
       |||||  ||||||| ||  |||| ||| ||||||| |   |||||||||||||||||| ||||||||||||||||    
T  34006461 -ctattttgtgtcattgctacctgttcttagtcaaaaattaggttttcgggctacttgatcggattgctccgaaactt 34006537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 373 - 466
Target Start/End: Complemental strand, 28866687 - 28866594
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    ||||||||||| |||||||||||||||||||||| ||||| ||| |||||||||||| ||||||| ||||| | ||||||||  ||||||||||    
T  28866687 attatataatctgaactgtatcagcacaaattttaaacatgtttgtaacatggatagccattttatggacatttttaatcttcataactctcat 28866594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 373 - 549
Target Start/End: Original strand, 42928986 - 42929160
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatag 472  Q
    ||||||||||||| |||||||||| ||||||  ||| ||| ||||||||||| || | |||||||||||| |||||||| ||  ||||||||||   ||     
T  42928986 attatataatccggactgtatcagtacaaatcatgagcatgtttataacatgtattgccattttaaggaccatattaattttcttaactctcattctta- 42929084  T
Q  473 tcattttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
       |||||| ||||||||||||||| | | |||||||     |||||| ||||||||||||||||||||||||||||    
T  42929085 -tgttttagatcattgttagttgttctcagtcaaaaatctggttttcgagctacttgatcagattgctccgaaactt 42929160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 256 - 362
Target Start/End: Complemental strand, 800992 - 800886
Alignment:
Q  256 aaaaaatgattttttcaccatttcaaattttataattcgaaaacctcaaaaaatatggcgttttcctttatttttccggattatagaatccgaacacccc 355  Q
    ||||||||| |||||||| | |||  ||||| |||| |||||| ||||||||||| |||| |||  || |||||| ||||||||||||||||||||||||    
T  800992 aaaaaatgagtttttcactaattcggattttgtaatccgaaaatctcaaaaaatagggcgctttatttgattttttcggattatagaatccgaacacccc 800893  T
Q  356 ctaaaca 362  Q
    |||||||    
T  800892 ctaaaca 800886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 373 - 463
Target Start/End: Original strand, 23442840 - 23442930
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactct 463  Q
    |||||||||||| ||||||||||||||||||  | ||||||||| ||||||| | || ||||||| |||||||||||||||| ||||||||    
T  23442840 attatataatccaaactgtatcagcacaaatcctaaacatatttgtaacatgtacagccattttagggacaatattaatcttcctaactct 23442930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 373 - 463
Target Start/End: Original strand, 49786370 - 49786460
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactct 463  Q
    |||||||||||| ||||||||||||||||||  | ||| ||||| ||||||| |||| ||||||| |||||||||||||||| ||||||||    
T  49786370 attatataatcctaactgtatcagcacaaatcctaaacttatttgtaacatgtatagccattttatggacaatattaatcttcctaactct 49786460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 373 - 549
Target Start/End: Complemental strand, 18583601 - 18583427
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatag 472  Q
    ||||||||||| |||||||||| ||||||||  | ||||||||| ||||||| |||| ||||||| |||||||||||||||  |||||||| ||   |      
T  18583601 attatataatctgaactgtatcggcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatctgcctaactcttatcctt-- 18583504  T
Q  473 tcattttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
    |  |||| |||||||||||  |||| ||| |||||||     |||||||||||||||||| |||||||| |||||||    
T  18583503 ttgttttgggtcattgttacctgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaactt 18583427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 373 - 466
Target Start/End: Complemental strand, 8704575 - 8704482
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    ||||||||||||||||||||||| ||| | || |||||||  ||||| |||||||||||||||||||||   |||||||||| |||||| ||||    
T  8704575 attatataatccgaactgtatcaccaccagttctgaacatgattatatcatggatagtcattttaaggatcttattaatcttcctaactatcat 8704482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 385 - 462
Target Start/End: Complemental strand, 40907979 - 40907902
Alignment:
Q  385 gaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactc 462  Q
    |||||||||||||||||||| | ||||| ||| ||||||||||| ||||||||  ||||||||||||||| |||||||    
T  40907979 gaactgtatcagcacaaattctaaacatgtttgtaacatggataatcattttagagacaatattaatcttcctaactc 40907902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 372 - 543
Target Start/End: Complemental strand, 5284378 - 5284208
Alignment:
Q  372 aattatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggata 471  Q
    |||||||||||  ||| || ||||||| ||||||||||||| ||||| |||||||||  || |||||||   ||||||||||| |||||  ||||  ||     
T  5284378 aattatataatatgaaatgcatcagcataaattttgaacatgtttatgacatggataaccagtttaagggtcatattaatcttcctaaccttcatc-att 5284280  T
Q  472 gtcattttaggtcattgttagttgttattaatcaaaaaatc-aattttcgggctacttgatcagattgctccg 543  Q
     |  ||||||||||||||||||||||  || | |||||||| |||||| | ||||||||||||||||||||||    
T  5284279 ctg-ttttaggtcattgttagttgttcctagtaaaaaaatctaatttttgagctacttgatcagattgctccg 5284208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 373 - 463
Target Start/End: Complemental strand, 26723545 - 26723455
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaagg-acaatattaatctttctaactct 463  Q
    ||||||||||||||||| |||||||||||||||  ||||| ||| |||||| ||||||||||||| || |||||||||||||| || |||||    
T  26723545 attatataatccgaactatatcagcacaaatttaaaacatgtttgtaacat-gatagtcattttagggaacaatattaatcttccttactct 26723455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 394 - 447
Target Start/End: Complemental strand, 800834 - 800781
Alignment:
Q  394 cagcacaaattttgaacatatttataacatggatagtcattttaaggacaatat 447  Q
    |||||| |||| ||||||| ||||||||||||||||||||||||||||||||||    
T  800834 cagcaccaattctgaacatgtttataacatggatagtcattttaaggacaatat 800781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 373 - 434
Target Start/End: Original strand, 32542495 - 32542556
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcatt 434  Q
    |||||||||||||||||||||||||||||||  | ||||||||| ||||||| |||||||||    
T  32542495 attatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtatagtcatt 32542556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 394 - 466
Target Start/End: Complemental strand, 43319016 - 43318944
Alignment:
Q  394 cagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    |||||| |||| ||||||| ||| |||||| ||||||||||||||| |||||||||||||| |||||| ||||    
T  43319016 cagcaccaattctgaacatgtttgtaacattgatagtcattttaagaacaatattaatcttcctaactttcat 43318944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 429 - 549
Target Start/End: Original strand, 38885371 - 38885489
Alignment:
Q  429 gtcattttaaggacaatattaatctttctaactctcatggatagtcattttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctactt 528  Q
    ||||||||||||||||||||||| || |||||||||||   |     |||| ||||||||||| ||||| ||| | ||||| |   ||||||||||||||    
T  38885371 gtcattttaaggacaatattaattttcctaactctcatccttctg--ttttgggtcattgttacttgttcttagttaaaaattgggttttcgggctactt 38885468  T
Q  529 gatcagattgctccgaaactt 549  Q
    |||| ||||||||||||||||    
T  38885469 gatcggattgctccgaaactt 38885489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 394 - 466
Target Start/End: Complemental strand, 9445922 - 9445850
Alignment:
Q  394 cagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    |||||| |||| | ||||| ||| || ||||||||||||||||||||| ||| |||||||| |||||||||||    
T  9445922 cagcaccaattctaaacatctttgtagcatggatagtcattttaaggagaatgttaatcttcctaactctcat 9445850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 408 - 466
Target Start/End: Complemental strand, 800614 - 800556
Alignment:
Q  408 aacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    ||||| ||| || |||||||||||||||| |||||||||||||| || |||||||||||    
T  800614 aacatgtttgtagcatggatagtcatttttaggacaatattaattttcctaactctcat 800556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 377 - 439
Target Start/End: Complemental strand, 834882 - 834820
Alignment:
Q  377 tataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaag 439  Q
    ||||||| |||||||||||||| |||  |||||||||||| ||||| ||||||||| ||||||    
T  834882 tataatctgaactgtatcagcataaagattgaacatatttgtaacagggatagtcagtttaag 834820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 373 - 454
Target Start/End: Original strand, 890616 - 890697
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctt 454  Q
    ||||||| ||||||| |||||||||||||||| | |   | ||| |||||||||||  || |||||||||||||||||||||    
T  890616 attatattatccgaaatgtatcagcacaaattctaagtctgtttgtaacatggataaccagtttaaggacaatattaatctt 890697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 43319220 - 43319167
Alignment:
Q  401 aattttgaacatatttataacatggatagtcattttaaggacaatattaatctt 454  Q
    |||| ||||||| ||| |||||| ||||||||||||||||| ||||||||||||    
T  43319220 aattctgaacatgtttgtaacattgatagtcattttaaggataatattaatctt 43319167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 476 - 549
Target Start/End: Complemental strand, 45880065 - 45879992
Alignment:
Q  476 ttttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
    ||||||||||||||||||| || ||| |||||||   | |||| ||| |||||||||| |||||||||||||||    
T  45880065 ttttaggtcattgttagttttttttagtcaaaaatctagtttttgggatacttgatcaaattgctccgaaactt 45879992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 204 - 360
Target Start/End: Original strand, 7828295 - 7828451
Alignment:
Q  204 agattttcggattttagaatccaaacttagttttttcttcgttatgatatggaaaaaatgattttttcaccatttcaaattttataattcgaaaacctca 303  Q
    |||||||||||||||| ||||  |||| ||||||| |||  |||||    | ||||||| | |||||||||| |||||||||||||||   |||| | ||    
T  7828295 agattttcggattttaaaatctgaactgagtttttcctttcttatggggcgaaaaaaattagtttttcaccaattcaaattttataatataaaaatccca 7828394  T
Q  304 aaaaatatggcgttttcctttatttttccggattatagaatccgaacaccccctaaa 360  Q
    ||||||| || || ||| |   |||||  ||||||||||||||||| || |||||||    
T  7828395 aaaaataaggtgtgttcatcgctttttttggattatagaatccgaatacaccctaaa 7828451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 373 - 404
Target Start/End: Original strand, 38885329 - 38885360
Alignment:
Q  373 attatataatccgaactgtatcagcacaaatt 404  Q
    ||||||||||||||||||||||||||||||||    
T  38885329 attatataatccgaactgtatcagcacaaatt 38885360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 515 - 549
Target Start/End: Original strand, 42546210 - 42546244
Alignment:
Q  515 ttttcgggctacttgatcagattgctccgaaactt 549  Q
    |||||||||||||||||| ||||||||||||||||    
T  42546210 ttttcgggctacttgatcggattgctccgaaactt 42546244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 476 - 549
Target Start/End: Complemental strand, 6223707 - 6223634
Alignment:
Q  476 ttttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
    ||||||||||||||||  |||| ||| |||||||     |||||||||||||||||| |||||||| |||||||    
T  6223707 ttttaggtcattgttacatgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaactt 6223634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 446
Target Start/End: Complemental strand, 6223779 - 6223730
Alignment:
Q  397 cacaaattttgaacatatttataacatggatagtcattttaaggacaata 446  Q
    |||||||||| || || ||| |||||||||||||||||||| ||||||||    
T  6223779 cacaaattttaaatatgtttgtaacatggatagtcattttagggacaata 6223730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 326 - 354
Target Start/End: Original strand, 42928931 - 42928959
Alignment:
Q  326 tttttccggattatagaatccgaacaccc 354  Q
    |||||||||||||||||||||||||||||    
T  42928931 tttttccggattatagaatccgaacaccc 42928959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 80; Significance: 3e-37; HSPs: 68)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 373 - 549
Target Start/End: Original strand, 27158148 - 27158322
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatag 472  Q
    ||||||||||| |||||||||||||||||||| ||||||| |||  |||||||||||||||||||||||||||||||| ||| ||||  |||||          
T  27158148 attatataatctgaactgtatcagcacaaattatgaacatgtttgaaacatggatagtcattttaaggacaatattaagcttcctaatcctcat---cct 27158244  T
Q  473 tca-ttttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
    ||| |||| ||||||| ||||||||||||||| ||||| ||  ||||| |||||||||||||||||||||||||||||    
T  27158245 tcacttttgggtcattattagttgttattaataaaaaattcggttttcaggctacttgatcagattgctccgaaactt 27158322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 373 - 466
Target Start/End: Complemental strand, 28083435 - 28083342
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    |||||||||||||||||||||||||||||||| | ||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  28083435 attatataatccgaactgtatcagcacaaattataaacatatttgtaacatggatagtcattttagggacaatattaatctttctaactttcat 28083342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 373 - 549
Target Start/End: Original strand, 33487674 - 33487849
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggat-a 471  Q
    |||||||||||||||||||||||||||||||| | || || ||| |||||||||||||||||||| |||||||||||||||| |||||||||||   | |    
T  33487674 attatataatccgaactgtatcagcacaaattctaaaaatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttca 33487773  T
Q  472 gtcattttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
    ||  |||| |||||||||||  |||| ||| |||||||   | ||||||||||||||||||   ||||||||||||||    
T  33487774 gt--ttttgggtcattgttacatgttcttagtcaaaaatcgagttttcgggctacttgatcgatttgctccgaaactt 33487849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 372 - 549
Target Start/End: Complemental strand, 4064778 - 4064602
Alignment:
Q  372 aattatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggata 471  Q
    |||||||||||||||||| |||||||||||||| | ||||| ||| |||||||||||||||||||| ||||||| |||||||| |||||| ||||   |     
T  4064778 aattatataatccgaactttatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatgttaatcttcctaactatcat-cctt 4064680  T
Q  472 gtcattttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
     |  |||| |||||||||||  |||| ||| |||||||   |||||||||||||||||||  ||||||||||||||||    
T  4064679 ctatttttgggtcattgttacctgttcttagtcaaaaatcgaattttcgggctacttgattggattgctccgaaactt 4064602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 373 - 549
Target Start/End: Complemental strand, 31221396 - 31221222
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatag 472  Q
    |||||||||||| ||||||||||||||||||| | ||||| ||| |||||||||||||||||||| |||||||||||||||| |||||||||||   |      
T  31221396 attatataatccaaactgtatcagcacaaattataaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcat--cttt 31221299  T
Q  473 tcattttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
       |||| |||||||||||  |||| ||| | ||||| |   |||||||||||||||||| ||||||||||||||||    
T  31221298 ctgttttgggtcattgttacatgttcttagttaaaaactgggttttcgggctacttgatcggattgctccgaaactt 31221222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 372 - 549
Target Start/End: Original strand, 29862675 - 29862851
Alignment:
Q  372 aattatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggat- 470  Q
    ||||||||||||||||||||||||||||||||| | ||||| ||| |||||||||||||||||||| |||||||||||||||| |||||| ||||   |     
T  29862675 aattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactttcatccttc 29862774  T
Q  471 agtcattttaggtcattgttagttgttattaatcaaaaaatcaa-ttttcgggctacttgatcagattgctccgaaactt 549  Q
     ||  |||| ||||||| |||  |||| ||| || ||||||||| |||||||||||||||||  ||||||||||||||||    
T  29862775 cgt--ttttgggtcattattacctgttcttagtc-aaaaatcaagttttcgggctacttgatgtgattgctccgaaactt 29862851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 373 - 466
Target Start/End: Complemental strand, 31929181 - 31929089
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    ||||||||||| |||||||||||||||||||||| ||||| ||| ||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  31929181 attatataatctgaactgtatcagcacaaattttaaacatgtttgtaacatggatagtcatttt-aggacaatattaatcttcctaactctcat 31929089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 373 - 466
Target Start/End: Original strand, 38871735 - 38871828
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    |||||||||||||||||||||||||||||||| | ||||| ||| |||||||||||||||||||| |||||||| ||||||| |||||||||||    
T  38871735 attatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaataataatcttcctaactctcat 38871828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 373 - 466
Target Start/End: Original strand, 20891677 - 20891770
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    ||||||||||| |||||||||||||||||||| | ||||| ||| |||||||||||||||||||| ||| |||||||||||| |||||||||||    
T  20891677 attatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggataatattaatcttcctaactctcat 20891770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 373 - 466
Target Start/End: Original strand, 38372373 - 38372466
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    ||||||||||||||||||||| |||||||||| | ||||| ||| | |||||||||||||||||| |||||||||||||||| |||||||||||    
T  38372373 attatataatccgaactgtattagcacaaattctaaacatgtttgttacatggatagtcattttagggacaatattaatcttcctaactctcat 38372466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 373 - 466
Target Start/End: Complemental strand, 38692840 - 38692747
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    |||||||||||||||||||||||||||||||| | ||||| ||| ||||||||||| |||||||||||||||||||||| ||  ||||||||||    
T  38692840 attatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggataatcattttaaggacaatattaatattcataactctcat 38692747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 373 - 547
Target Start/End: Complemental strand, 37183838 - 37183666
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatag 472  Q
    ||||||||||| ||||||||||| |||||||| | || || ||| |||||||||||||||||||| |||||||||||||||| |||||||||||   |      
T  37183838 attatataatctgaactgtatcaacacaaattctaaatatgtttgtaacatggatagtcattttatggacaatattaatcttcctaactctcat--cttt 37183741  T
Q  473 tcattttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaac 547  Q
    |  |||| ||||||||||| ||||| ||| |||||||     ||||| | |||||||||| ||||||||||||||    
T  37183740 ttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcagactacttgatcggattgctccgaaac 37183666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 373 - 459
Target Start/End: Original strand, 15799289 - 15799375
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaa 459  Q
    |||||||||||||||||||||||||||||||| | ||||| ||| |||||||||||||||||||| ||||||||||| |||| ||||    
T  15799289 attatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttatggacaatattattcttcctaa 15799375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 373 - 466
Target Start/End: Complemental strand, 32842028 - 32841934
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaagg-acaatattaatctttctaactctcat 466  Q
    |||||||||| |||| |||||||||||||||||| ||||| ||| |||||||||||||||||||| || |||||||||||||| |||||||||||    
T  32842028 attatataattcgaattgtatcagcacaaattttaaacatgtttgtaacatggatagtcattttagggaacaatattaatcttcctaactctcat 32841934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 373 - 546
Target Start/End: Original strand, 39524840 - 39525011
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatag 472  Q
    ||||||||||||||||||||||| |||||||| | ||||||||| ||| ||| |||||||||||| | |||||||||||||| |||||||||||   |      
T  39524840 attatataatccgaactgtatcatcacaaattctaaacatatttgtaatatgtatagtcattttaggaacaatattaatcttcctaactctcatcctt-- 39524937  T
Q  473 tcattttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaa 546  Q
       |||| ||||||||||| ||||| ||| || |||| |   ||||||  ||||||||||||||||||||||||    
T  39524938 ctgttttgggtcattgttacttgttcttagtccaaaattgggttttcgaactacttgatcagattgctccgaaa 39525011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 373 - 466
Target Start/End: Original strand, 6156795 - 6156888
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    |||||||||| |||| |||||||||| ||||| | ||||| ||| |||||||||||||||||||| |||||||||||||||| |||||||||||    
T  6156795 attatataatacgaattgtatcagcataaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcat 6156888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 373 - 454
Target Start/End: Original strand, 21070430 - 21070511
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctt 454  Q
    |||||||||||| ||||| ||||| ||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  21070430 attatataatccaaactgaatcagtacaaattctgaacatatttgtaacatagatagtcattttaaggacaatattaatctt 21070511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 373 - 549
Target Start/End: Complemental strand, 40613732 - 40613558
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatag 472  Q
    ||||||||||||||||||||| |||| ||||| ||||||| ||| ||||||||||| | |||||||||||| |||||||||| |||||| ||||   ||     
T  40613732 attatataatccgaactgtatgagcaaaaattatgaacatgtttgtaacatggataattattttaaggacattattaatcttcctaactttcatcctta- 40613634  T
Q  473 tcattttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
       | ||||||||||| ||  |||| ||| | |||||  || |||| | ||||||||||||||||||||||||||||    
T  40613633 -tgtattaggtcattgctaactgttcttagttaaaaatccagtttttgagctacttgatcagattgctccgaaactt 40613558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 378 - 549
Target Start/End: Original strand, 12847512 - 12847681
Alignment:
Q  378 ataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatagtcatt 477  Q
    ||||||||||||||||||||||||||| ||||||| ||| |||||| |||| |||||||| |||||||||||||||| | |||||||  | ||     ||    
T  12847512 ataatccgaactgtatcagcacaaattctgaacatgtttgtaacatagataatcattttatggacaatattaatcttcccaactctc--gtatttctgtt 12847609  T
Q  478 ttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
    || | |||||||||| |||| ||| |||||||   | ||||||||||||||||||| ||| ||| |||||||    
T  12847610 ttggatcattgttagctgttcttagtcaaaaatcgagttttcgggctacttgatcatattactctgaaactt 12847681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 373 - 452
Target Start/End: Original strand, 25747089 - 25747168
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatc 452  Q
    |||||||||||||||||||||||||||||||| | ||||| ||| |||||||||||||||||||| |||||| |||||||    
T  25747089 attatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaacattaatc 25747168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 373 - 466
Target Start/End: Complemental strand, 8739042 - 8738949
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    |||| ||||||| ||||| |||| ||| |||| ||||||| ||| |||||||||||||||||||||| |||||||||||||| |||||||||||    
T  8739042 attacataatccaaactgcatcaacaccaattctgaacatgtttgtaacatggatagtcattttaagaacaatattaatcttcctaactctcat 8738949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 373 - 466
Target Start/End: Original strand, 26093510 - 26093603
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    |||||||||||| |||| |||||||| ||||| ||||||| ||| |||||||||||||||||||| |||||| |||||||||  ||||||||||    
T  26093510 attatataatcctaactatatcagcataaattatgaacatgtttctaacatggatagtcattttatggacaaaattaatcttcttaactctcat 26093603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 372 - 550
Target Start/End: Complemental strand, 6800985 - 6800809
Alignment:
Q  372 aattatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggata 471  Q
    |||||||||||  |||||||||||||| ||||| ||||||| |||  |||||||| ||||||||||||||||||  ||||||| || | ||||||   |     
T  6800985 aattatataatttgaactgtatcagcataaattatgaacatgtttgcaacatggacagtcattttaaggacaatgctaatcttcctcattctcatcctt- 6800887  T
Q  472 gtcattttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaacttg 550  Q
        ||||||||||||||||| |||| ||| |||||||  |  ||||||  ||||||||||| ||||||||||||||||    
T  6800886 -ctgttttaggtcattgttagatgttcttagtcaaaaatccggttttcgaactacttgatcatattgctccgaaacttg 6800809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 379 - 466
Target Start/End: Complemental strand, 8739239 - 8739152
Alignment:
Q  379 taatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    |||||| ||||| | |||||| |||| ||||||| ||| |||||||| |||||||||||||||||||||||||||| |||||||||||    
T  8739239 taatccaaactgcaccagcaccaattctgaacatgtttgtaacatgggtagtcattttaaggacaatattaatcttcctaactctcat 8739152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 389 - 549
Target Start/End: Original strand, 14111947 - 14112103
Alignment:
Q  389 tgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatagtcattttaggtcattg 488  Q
    |||||||||||||||||| || || ||| |||||||||||||||||||| |||||||||||||||| |||||| ||    ||  | ||||| ||| ||||    
T  14111947 tgtatcagcacaaattttaaatatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactttc----atccttattttgggttattg 14112042  T
Q  489 ttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
    ||| ||||| ||| |||||||     ||||||| |||||||||  ||||||||||||||||    
T  14112043 ttacttgttcttagtcaaaaatcgggttttcggactacttgataggattgctccgaaactt 14112103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 374 - 465
Target Start/End: Complemental strand, 24203740 - 24203649
Alignment:
Q  374 ttatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctca 465  Q
    ||||||||||||||||||||||||| ||||| | ||||| ||| ||||  ||||| |||||||||||||||||||||| || ||||||||||    
T  24203740 ttatataatccgaactgtatcagcataaattctaaacatgtttgtaactgggataatcattttaaggacaatattaatgttcctaactctca 24203649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 372 - 549
Target Start/End: Original strand, 7884256 - 7884431
Alignment:
Q  372 aattatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggata 471  Q
    |||||||||||| ||||||||||| |||||||| | || || ||| ||| ||| || ||||||||| |||||||||||||||| |||||||||||   |     
T  7884256 aattatataatctgaactgtatcaacacaaattctaaatatgtttgtaatatgtattgtcattttagggacaatattaatcttcctaactctcatcctt- 7884354  T
Q  472 gtcattttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
        |||| |||||||||||  |||| ||| |||| ||    ||||||||||||||||||| ||||||||||||||||    
T  7884355 -ctgttttgggtcattgttacatgttcttagtcaagaatcggattttcgggctacttgatcggattgctccgaaactt 7884431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 373 - 463
Target Start/End: Original strand, 15957813 - 15957903
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactct 463  Q
    ||||||||||| |||||||||||| ||||||| | ||||| ||| |||||| |||||| |||||| |||||||||||||||| ||||||||    
T  15957813 attatataatctgaactgtatcagtacaaattctaaacatgtttgtaacatagatagtaattttagggacaatattaatcttcctaactct 15957903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 373 - 463
Target Start/End: Complemental strand, 26190355 - 26190265
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactct 463  Q
    |||||||||||||||||||||||||||||||  | ||||||||| ||||||| |||| ||||||||||| ||| ||||| || ||||||||    
T  26190355 attatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttaaggataattttaatattcctaactct 26190265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 373 - 454
Target Start/End: Original strand, 13908612 - 13908693
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctt 454  Q
    ||||||||||||||| ||||||| || ||||||| ||||| ||| ||||| |||||||||||||| ||||||||||||||||    
T  13908612 attatataatccgaattgtatcaacataaattttaaacatgtttgtaacacggatagtcattttatggacaatattaatctt 13908693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 373 - 466
Target Start/End: Complemental strand, 40620047 - 40619954
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    ||||||||||||||| |||||||| ||||||| | |||||  || ||||||||| | |||||||| |||||||||||||||| |||||||||||    
T  40620047 attatataatccgaattgtatcagtacaaattctaaacatgcttgtaacatggacaatcattttagggacaatattaatcttcctaactctcat 40619954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 265 - 362
Target Start/End: Original strand, 41253240 - 41253337
Alignment:
Q  265 ttttttcaccatttcaaattttataattcgaaaacctcaaaaaatatggcgttttcctttatttttccggattatagaatccgaacaccccctaaaca 362  Q
    ||||||||||| ||| |||||||||||  |||| ||| |||||||| |||| ||||||   ||||||||||||||||||||| |||||||||||||||    
T  41253240 ttttttcaccaattcgaattttataatctgaaaccctaaaaaaatagggcgctttcctcactttttccggattatagaatccaaacaccccctaaaca 41253337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 386 - 466
Target Start/End: Complemental strand, 8973653 - 8973573
Alignment:
Q  386 aactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    ||||||| | |||| |||||||||||| ||| ||||||||||| ||||||||||||||||||||| ||| |||||||||||    
T  8973653 aactgtacccgcaccaattttgaacatgtttgtaacatggataatcattttaaggacaatattaaccttcctaactctcat 8973573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 192 - 359
Target Start/End: Original strand, 14001553 - 14001717
Alignment:
Q  192 aaaatgttcttaagattttcggattttagaatccaaacttagttttttcttcgttatgatatggaaaaaatgattttttcaccatttcaaattttataat 291  Q
    ||||||| |||  |||||||||||||||||||||||| | ||| ||  ||| |||||| | || |||||| | |||||  |||| ||| |||||||||||    
T  14001553 aaaatgtccttgtgattttcggattttagaatccaaattgagtcttc-ctttgttatggtgtgaaaaaaaagtttttt--accaattcgaattttataat 14001649  T
Q  292 tcgaaaacctcaaaaaatatggcgttttcctttatttttccggattatagaatccgaacaccccctaa 359  Q
      ||||||||||||||||| ||||| ||| ||  ||||| ||||||||| |||||||||||| |||||    
T  14001650 ctgaaaacctcaaaaaatagggcgtgttcattccttttttcggattataaaatccgaacaccacctaa 14001717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 381 - 460
Target Start/End: Complemental strand, 27494202 - 27494123
Alignment:
Q  381 atccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaac 460  Q
    |||| ||||| | |||||| |||| | ||||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  27494202 atccaaactgcaccagcaccaattctaaacatatttgtaacatggatagtcattttaaggacaatattaatcttcctaac 27494123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 256 - 351
Target Start/End: Original strand, 26622017 - 26622113
Alignment:
Q  256 aaaaaatgattttttcaccatttcaaattttataattcgaaaacctcaaaaaatatggcgttttcct--ttatttttccggattatagaatccgaaca 351  Q
    |||||| || |||||||||| |||  ||||||||||||||||||||||||||||| ||||| |||||  |||||||| | ||||||||||||||||||    
T  26622017 aaaaaaagagtttttcaccagttcggattttataattcgaaaacctcaaaaaataaggcgtgttccttgttattttt-cagattatagaatccgaaca 26622113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 373 - 466
Target Start/End: Original strand, 26095156 - 26095249
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    ||||||||||| ||| ||||||| || ||||| | ||||| ||| |||||||||||||||| ||| ||||||||||||||||  ||||||||||    
T  26095156 attatataatctgaattgtatcaacataaattctaaacatgtttgtaacatggatagtcatattatggacaatattaatcttcttaactctcat 26095249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 394 - 455
Target Start/End: Complemental strand, 28445441 - 28445380
Alignment:
Q  394 cagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatcttt 455  Q
    |||||| |||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  28445441 cagcacgaattctgaacatgtttgtaacatggatagtcattttaaggacaatattaatcttt 28445380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 394 - 466
Target Start/End: Original strand, 34530300 - 34530372
Alignment:
Q  394 cagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    |||||| |||| ||||||| ||| |||||||| |||||||||||||||||||||||||||| |||||| ||||    
T  34530300 cagcactaattctgaacatgtttgtaacatggttagtcattttaaggacaatattaatcttcctaactttcat 34530372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 373 - 549
Target Start/End: Original strand, 41253364 - 41253538
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatag 472  Q
    |||||||||| ||||||||| |||||| |||| ||||| | ||| ||||||| |||   | |||||| || ||||||||||| |||||| ||||   |      
T  41253364 attatataattcgaactgtaccagcaccaattatgaacttgtttgtaacatgaataacgaatttaagtaccatattaatcttcctaactatcatcc-tcc 41253462  T
Q  473 tcattttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
    |  ||||||||||||||||||||||  |||| |||||  ||| || ||||| |||||||||||||||||||||||||    
T  41253463 tg-ttttaggtcattgttagttgttcctaataaaaaatccaaattccgggccacttgatcagattgctccgaaactt 41253538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 256 - 466
Target Start/End: Original strand, 23269272 - 23269494
Alignment:
Q  256 aaaaaatgattttttcaccatttcaaattttataattcgaaaacctcaaaaaatatggcgttttcctttatttttccggattatagaatccgaacacccc 355  Q
    ||||||||| |||||||| | |||  |||||||||| |||||| |||| |||||| || ||||| ||| |||||| ||||||| | |||||||||||||     
T  23269272 aaaaaatgagtttttcactaattcggattttataatccgaaaatctcataaaatagggtgttttacttgattttttcggattaaataatccgaacaccct 23269371  T
Q  356 ct------aa---acaaacagtcacaattatataatccgaactgtatcagca---caaattttgaacatatttataacatggatagtcattttaaggaca 443  Q
     |      ||   | |||||||    ||||||||||||||||| ||||| ||   ||| || ||||||| ||| ||||||| | | ||||||||||||||    
T  23269372 ttcttttcaagggaaaaacagttcagattatataatccgaactttatcatcatcacaacttctgaacatgtttgtaacatgaacaatcattttaaggaca 23269471  T
Q  444 atattaatctttctaactctcat 466  Q
    ||||||||||| |||||||||||    
T  23269472 atattaatcttcctaactctcat 23269494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 476 - 549
Target Start/End: Original strand, 33901124 - 33901197
Alignment:
Q  476 ttttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
    |||||||||||||||||||||| ||| ||||||| |  |||||| | ||| |||||||||||||||||||||||    
T  33901124 ttttaggtcattgttagttgtttttagtcaaaaatttgattttcagactatttgatcagattgctccgaaactt 33901197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 38640818 - 38640871
Alignment:
Q  401 aattttgaacatatttataacatggatagtcattttaaggacaatattaatctt 454  Q
    |||| ||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  38640818 aattctgaacatgtttataacatggatagtcaatttaaggacaatattaatctt 38640871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 373 - 537
Target Start/End: Complemental strand, 41639550 - 41639385
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatag 472  Q
    |||||||||||||||||||||||||||||||| |||   | ||| |||||| ||||  || ||||| |||||||||||| |  |||||||||||   |      
T  41639550 attatataatccgaactgtatcagcacaaattctgagtctgtttgtaacatagataaccagtttaatgacaatattaatttccctaactctcat--cttt 41639453  T
Q  473 tcattttaggtcattgttagttgttatta--atcaaaaaatc-aattttcgggctacttgatcagatt 537  Q
    |  |||||||||||||||||||||| |||  |  ||||||||  |||||| |||||||||||||||||    
T  41639452 ttgttttaggtcattgttagttgttcttagtaaaaaaaaatctgattttcaggctacttgatcagatt 41639385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 379 - 463
Target Start/End: Original strand, 16429352 - 16429436
Alignment:
Q  379 taatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactct 463  Q
    |||||| ||||  |||||||| |||| ||||||| ||| ||||||| |||||| |||||||||||||||||||||| | ||||||    
T  16429352 taatccaaactacatcagcaccaattctgaacatgtttgtaacatgaatagtcgttttaaggacaatattaatcttccaaactct 16429436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 277 - 351
Target Start/End: Complemental strand, 11186345 - 11186271
Alignment:
Q  277 ttcaaattttataattcgaaaacctcaaaaaatatggcgttttcctttatttttccggattatagaatccgaaca 351  Q
    |||| |||||||||| |||||||||||||||||| ||||  ||||||  ||||| ||||||||||||| ||||||    
T  11186345 ttcagattttataatccgaaaacctcaaaaaatagggcgcgttccttgcttttttcggattatagaattcgaaca 11186271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 373 - 549
Target Start/End: Original strand, 26622177 - 26622348
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatag 472  Q
    |||||||||| |||||||||||||||||||||| |||  | ||| |||||| | ||  ||  |||||||| ||||||| ||| |||||| ||||   |      
T  26622177 attatataattcgaactgtatcagcacaaatttcgaatttgtttgtaacatag-taaccagattaaggaccatattaaacttcctaactttcatccttct 26622275  T
Q  473 tcattttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
      ||||||||| |||||||||||||  || |||||||  |  ||||||| |||||||||||||||||||||||||||    
T  26622276 --attttaggttattgttagttgtt--tagtcaaaaatccggttttcggactacttgatcagattgctccgaaactt 26622348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 392 - 466
Target Start/End: Complemental strand, 28445247 - 28445173
Alignment:
Q  392 atcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    |||| ||| |||| ||||||| ||| ||||||| || ||| |||||||||||||||||||||| |||||||||||    
T  28445247 atcaacaccaattctgaacatgtttgtaacatgtatggtcgttttaaggacaatattaatcttcctaactctcat 28445173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 38641026 - 38641079
Alignment:
Q  401 aattttgaacatatttataacatggatagtcattttaaggacaatattaatctt 454  Q
    |||| ||||||| ||| |||||| ||||||||||||||||||||||||||||||    
T  38641026 aattctgaacatgtttgtaacatagatagtcattttaaggacaatattaatctt 38641079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 43388094 - 43388042
Alignment:
Q  401 aattttgaacatatttataacatggatagtcattttaaggacaatattaatctt 454  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||||||||||    
T  43388094 aattctgaacatatttataacatggatagt-tttttaaggacaatattaatctt 43388042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 256 - 355
Target Start/End: Complemental strand, 41639682 - 41639585
Alignment:
Q  256 aaaaaatgattttttcaccatttcaaattttataattcgaaaacctcaaaaaatatggcgttttcctttatttttccggattatagaatccgaacacccc 355  Q
    ||||||||| |||||||| | |||| ||||||||||||||||||||  ||||||| || || ||||||  |||||  ||  |||||||||||||||||||    
T  41639682 aaaaaatgagtttttcacaaattcagattttataattcgaaaaccttgaaaaatagggtgtgttccttgcttttt--gggatatagaatccgaacacccc 41639585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 392 - 454
Target Start/End: Original strand, 4650178 - 4650240
Alignment:
Q  392 atcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctt 454  Q
    |||| ||| |||||||||||| ||| | ||||||||||||||| |||| ||||||||||||||    
T  4650178 atcaacaccaattttgaacatgtttgtcacatggatagtcattgtaagaacaatattaatctt 4650240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 362
Target Start/End: Original strand, 18514732 - 18514838
Alignment:
Q  257 aaaaatgattttttcaccatttcaaattttataattcgaaaacctcaaaaaatatggcgttttccttt-atttttccggattatagaatccgaacacccc 355  Q
    |||||| | |||||||||| |||||||||| |||| |||| ||| ||||||||| || |  ||||||  |||||| |||||||||||||  || ||||||    
T  18514732 aaaaataagtttttcaccaattcaaattttgtaatccgaacaccccaaaaaatagggtgcgttccttacattttttcggattatagaatttgatcacccc 18514831  T
Q  356 ctaaaca 362  Q
    |||||||    
T  18514832 ctaaaca 18514838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 190 - 315
Target Start/End: Complemental strand, 28445668 - 28445542
Alignment:
Q  190 caaaaatgttcttaagattttcggattttagaatccaaacttagttttttcttcgttatgatatg-gaaaaaatgattttttcaccatttcaaattttat 288  Q
    ||||||||| ||| |||||||||||||||| ||||| |||| |  |||| ||| ||||| |  ||  ||||||||| |||||||||| |||  ||||| |    
T  28445668 caaaaatgtccttgagattttcggattttaaaatccgaactaatgttttcctttgttataaggtgaaaaaaaatgagtttttcaccaattcggattttgt 28445569  T
Q  289 aattcgaaaacctcaaaaaatatggcg 315  Q
    ||| |||||| ||||||||||| ||||    
T  28445568 aatccgaaaatctcaaaaaatagggcg 28445542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 392 - 466
Target Start/End: Original strand, 34530117 - 34530190
Alignment:
Q  392 atcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    |||||||| ||||||| |||| ||| || | ||||||||||||||||||||| |||||||||| |||||| ||||    
T  34530117 atcagcaccaattttggacatgtttgtagc-tggatagtcattttaaggacagtattaatcttcctaactttcat 34530190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 482 - 550
Target Start/End: Complemental strand, 26898753 - 26898685
Alignment:
Q  482 gtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaacttg 550  Q
    ||||||||||  |||| ||| |||||||   | |||||||||||||||||| |||||||||||||||||    
T  26898753 gtcattgttatatgttcttagtcaaaaatcgagttttcgggctacttgatcggattgctccgaaacttg 26898685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 255 - 355
Target Start/End: Original strand, 7036467 - 7036569
Alignment:
Q  255 gaaaaaatgattttttcaccatttcaaattttataattcgaaaacctcaaaaaatat--ggcgttttcctttatttttccggattatagaatccgaacac 352  Q
    |||||||||| | |||||||| |||| |||||||||| |||||||| ||||||| ||  ||||| || |||  ||||| | ||||||||||| ||| |||    
T  7036467 gaaaaaatgagtatttcaccaattcagattttataatccgaaaaccacaaaaaaaatagggcgtgtttcttacttttttcagattatagaattcgagcac 7036566  T
Q  353 ccc 355  Q
    |||    
T  7036567 ccc 7036569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 373 - 428
Target Start/End: Complemental strand, 11186232 - 11186177
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggata 428  Q
    |||||||||||||||||||||||||| ||||| |||   ||||| |||||||||||    
T  11186232 attatataatccgaactgtatcagcataaattctgagtctatttgtaacatggata 11186177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 409 - 460
Target Start/End: Complemental strand, 27493970 - 27493919
Alignment:
Q  409 acatatttataacatggatagtcattttaaggacaatattaatctttctaac 460  Q
    |||| ||| |||||||||||||||||||||  |||||||||||||| |||||    
T  27493970 acatgtttgtaacatggatagtcattttaaaaacaatattaatcttcctaac 27493919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 408 - 466
Target Start/End: Original strand, 16429171 - 16429229
Alignment:
Q  408 aacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    ||||| ||| ||||||||||||||||||||| || |||| |||||||  ||||||||||    
T  16429171 aacatgtttgtaacatggatagtcattttaatgataatactaatcttcataactctcat 16429229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 515 - 549
Target Start/End: Complemental strand, 31929042 - 31929008
Alignment:
Q  515 ttttcgggctacttgatcagattgctccgaaactt 549  Q
    |||||||||||||||||| ||||||||||||||||    
T  31929042 ttttcgggctacttgatcggattgctccgaaactt 31929008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 450
Target Start/End: Complemental strand, 1350367 - 1350290
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaa 450  Q
    |||||||||| | |||| ||||| |||||||| | ||||| ||| |||||||||||  ||||||| ||| ||||||||    
T  1350367 attatataattcaaactatatcaacacaaattctaaacatgtttgtaacatggataaccattttatggataatattaa 1350290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Original strand, 3435255 - 3435288
Alignment:
Q  329 ttccggattatagaatccgaacaccccctaaaca 362  Q
    ||||||| ||||||||||||||||||||||||||    
T  3435255 ttccggagtatagaatccgaacaccccctaaaca 3435288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 362
Target Start/End: Original strand, 14649949 - 14649978
Alignment:
Q  333 ggattatagaatccgaacaccccctaaaca 362  Q
    ||||||||||||||||||||||||||||||    
T  14649949 ggattatagaatccgaacaccccctaaaca 14649978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 476 - 549
Target Start/End: Original strand, 26093621 - 26093694
Alignment:
Q  476 ttttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
    |||| ||||||||||||||||| ||| ||||||| | | ||||| ||||| |||| ||||||||  ||||||||    
T  26093621 ttttgggtcattgttagttgttcttagtcaaaaattgagttttcaggctatttgaacagattgcctcgaaactt 26093694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 8032330 - 8032366
Alignment:
Q  399 caaattttgaacatatttataacatggatagtcattt 435  Q
    |||||||| ||||| ||||||||||||||||||||||    
T  8032330 caaattttaaacatgtttataacatggatagtcattt 8032366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 395 - 463
Target Start/End: Complemental strand, 12465154 - 12465086
Alignment:
Q  395 agcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactct 463  Q
    |||||||||  | ||||||||| ||| ||| ||||| |||||| ||||||||||||||||  |||||||    
T  12465154 agcacaaatcctaaacatatttgtaatatgtatagttattttagggacaatattaatcttcataactct 12465086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 266 - 310
Target Start/End: Complemental strand, 30209269 - 30209225
Alignment:
Q  266 tttttcaccatttcaaattttataattcgaaaacctcaaaaaata 310  Q
    |||||||||| ||||||||||||||| |||| ||| |||||||||    
T  30209269 tttttcaccaattcaaattttataatacgaacaccccaaaaaata 30209225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 77; Significance: 2e-35; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 372 - 549
Target Start/End: Original strand, 23406897 - 23407073
Alignment:
Q  372 aattatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggat- 470  Q
    ||||||||||||||||||||||||||||||||| | ||||| ||| |||||||||||||||||||| |||||||||||||||| |||||||||||   |     
T  23406897 aattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttc 23406996  T
Q  471 agtcattttaggtcattgttagttgttattaatcaaaaaatcaa-ttttcgggctacttgatcagattgctccgaaactt 549  Q
     ||  |||| ||||||| ||| ||||| ||| || ||||||||| |||||||||||||||||  ||||||||||||||||    
T  23406997 cgt--ttttgggtcattattacttgttcttagtc-aaaaatcaagttttcgggctacttgatttgattgctccgaaactt 23407073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 373 - 466
Target Start/End: Original strand, 2539553 - 2539646
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    ||||||||||||||||| |||| ||||||||| ||||||| ||| |||||||||||||||||||| |||||||||||||||| |||||||||||    
T  2539553 attatataatccgaactctatccgcacaaattctgaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcat 2539646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 375 - 549
Target Start/End: Complemental strand, 2813280 - 2813107
Alignment:
Q  375 tatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggat-agt 473  Q
    ||||||||||||||||||||| |||||||| | ||||||||| ||||||| |||||||||||| ||| |||||||||||| |||||||||||   |  ||    
T  2813280 tatataatccgaactgtatcaccacaaattctaaacatatttttaacatgaatagtcattttatggataatattaatcttcctaactctcatccttccgt 2813181  T
Q  474 cattttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
      |||| |||||||||||  |||| ||| |||||||     |||||||||||||||||| ||||||||||||||||    
T  2813180 --ttttgggtcattgttacctgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctccgaaactt 2813107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 376 - 552
Target Start/End: Original strand, 236899 - 237072
Alignment:
Q  376 atataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatagtca 475  Q
    ||||||| |||||| |||||||||||||| ||||||| ||| ||||||||| | ||||||||||||| ||||||||||| ||||||||||| | |    |    
T  236899 atataattcgaactatatcagcacaaattatgaacatgtttgtaacatggaaaatcattttaaggaccatattaatcttcctaactctcatcgtt--cta 236996  T
Q  476 ttttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaacttggc 552  Q
    |||||||||||||||||||||| | | ||  |||| |||| ||| || || |||||| |||||||| ||||||||||    
T  236997 ttttaggtcattgttagttgttttcagtc-gaaaaccaatattcaggttatttgatcggattgctctgaaacttggc 237072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 373 - 466
Target Start/End: Complemental strand, 1945587 - 1945494
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    |||||||||||||||||||||| ||||||||| | ||||| ||| |||||||||||||||||||| ||| |||||||||||| |||||||||||    
T  1945587 attatataatccgaactgtatcggcacaaattctaaacatgtttgtaacatggatagtcattttagggataatattaatcttcctaactctcat 1945494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 373 - 466
Target Start/End: Complemental strand, 3717340 - 3717247
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    ||||||||||||||||||||||| |||||||| | ||||| | | |||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  3717340 attatataatccgaactgtatcatcacaaattctaaacatgtctgtaacatggatagtcattttagggacaatattaatttttctaactctcat 3717247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 373 - 549
Target Start/End: Complemental strand, 29289682 - 29289508
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatag 472  Q
    ||||||||||| |||||||||||||||||||| ||||||| ||| |||||| |||| | |||||| ||||||||||||| || ||||||| |||   |      
T  29289682 attatataatctgaactgtatcagcacaaattatgaacatctttgtaacatagatattaattttatggacaatattaattttcctaactcgcatcctt-- 29289585  T
Q  473 tcattttaggtcattgttagttgttattaatcaaaaaatca-attttcgggctacttgatcagattgctccgaaactt 549  Q
       ||||||||||||||||| |||| ||| || ||||||||  |||||| |||||||||||| |||||||||||||||    
T  29289584 ctgttttaggtcattgttagatgttcttagtc-aaaaatcaggttttcgtgctacttgatcaaattgctccgaaactt 29289508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 373 - 466
Target Start/End: Complemental strand, 4508359 - 4508266
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    ||||||||||| |||||||||||||||||||| | ||||| ||| ||| |||||||||||||||| |||||||||||||||| |||||| ||||    
T  4508359 attatataatctgaactgtatcagcacaaattctaaacatgtttgtaatatggatagtcattttagggacaatattaatcttcctaactttcat 4508266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 373 - 466
Target Start/End: Original strand, 5699667 - 5699760
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    ||||||||||||||||||||| | |||||||| | || || ||| |||||||||||||||||||||||||||||||||||||  ||||||||||    
T  5699667 attatataatccgaactgtattaacacaaattctaaatatgtttgtaacatggatagtcattttaaggacaatattaatcttcataactctcat 5699760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 373 - 549
Target Start/End: Complemental strand, 14587617 - 14587443
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatag 472  Q
    |||||||||||  ||||||||| ||||||||| | ||||| ||| |||||||||||||||||||| |||||||||||||||| |||||||| ||   ||     
T  14587617 attatataatcataactgtatcggcacaaattctaaacatgtttgtaacatggatagtcattttacggacaatattaatcttcctaactctaatcctta- 14587519  T
Q  473 tcattttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
       |||| |||||||||||  |||| ||| | |||||||  ||||| ||||||||||||  ||||||| ||||||||    
T  14587518 -tgttttgggtcattgttacatgttcttagtaaaaaaatggatttttgggctacttgattggattgcttcgaaactt 14587443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 385 - 466
Target Start/End: Original strand, 34528554 - 34528635
Alignment:
Q  385 gaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    |||||||||||||||||||| ||||||| ||| ||||||||||| |||||| ||||| ||||||||||||||||||||||||    
T  34528554 gaactgtatcagcacaaattatgaacatgtttgtaacatggatattcatttcaaggataatattaatctttctaactctcat 34528635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 373 - 466
Target Start/End: Original strand, 17264512 - 17264605
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    ||||||||||| |||||||||||||||||||| | ||||| |||  ||||||| ||||||||||| |||||||||| ||||| |||||||||||    
T  17264512 attatataatctgaactgtatcagcacaaattctaaacatgtttgcaacatggttagtcattttagggacaatatttatcttcctaactctcat 17264605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 372 - 549
Target Start/End: Complemental strand, 6704184 - 6704010
Alignment:
Q  372 aattatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggata 471  Q
    |||||||||||||||||||| | ||||||||||   ||  ||||| |||||||||||   | ||||||||||||||||||||| |||||||||||   |     
T  6704184 aattatataatccgaactgtgttagcacaaattccaaatctatttgtaacatggataactagtttaaggacaatattaatcttcctaactctcatcattc 6704085  T
Q  472 gtcattttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
    |  |||||||||||||||||| ||||| |  |||||||  |  ||||||| ||| ||||||||||||||| |||||||    
T  6704084 g--attttaggtcattgttagctgttaat-gtcaaaaatccggttttcggactatttgatcagattgctctgaaactt 6704010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 373 - 549
Target Start/End: Original strand, 16450316 - 16450490
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatag 472  Q
    |||||||||||  | |||||||| || ||||||||| | ||||| |||||||||||  || ||||||||  ||||||||||| |||| ||||||   ||     
T  16450316 attatataatctaatctgtatcaacataaattttgagcttatttgtaacatggataaccagtttaaggaacatattaatcttcctaaatctcatcattat 16450415  T
Q  473 tcattttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
       ||||||||||||||||| |||| ||| ||||||| |   |||| ||||||||||||||||||||| ||||||||    
T  16450416 g--ttttaggtcattgttagctgttcttagtcaaaaatttggtttttgggctacttgatcagattgcttcgaaactt 16450490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 373 - 466
Target Start/End: Complemental strand, 24604418 - 24604325
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    ||||||||||| ||||| |||||||||||||| | ||||||||| |||||  |||||||||||||  ||||||||||||||| |||||| ||||    
T  24604418 attatataatctgaactctatcagcacaaattctaaacatatttgtaacaaagatagtcattttagagacaatattaatcttcctaactttcat 24604325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 373 - 550
Target Start/End: Complemental strand, 13801084 - 13800909
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatag 472  Q
    |||| |||||| ||||||||| |||| ||||| | ||||| ||| |||||| |||  |||||||| | |||||||||||||| |||||||||||   ||     
T  13801084 attacataatcggaactgtattagcataaattctaaacatgtttgtaacatagattatcattttatgaacaatattaatcttcctaactctcatcatta- 13800986  T
Q  473 tcattttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaacttg 550  Q
       |||| ||||||||||||||||| ||| |||||||    ||||| |  |||||||||| |||||||||||||||||    
T  13800985 -tgttttgggtcattgttagttgttcttagtcaaaaatcggatttttgaactacttgatcggattgctccgaaacttg 13800909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 373 - 466
Target Start/End: Original strand, 29519381 - 29519474
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    ||||||||||  |||||||||||||||||||| | ||||| ||| ||||||| || ||||||||| ||| |||||||||||| |||||| ||||    
T  29519381 attatataatatgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggaaaatattaatcttcctaactatcat 29519474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 418 - 549
Target Start/End: Complemental strand, 21515043 - 21514914
Alignment:
Q  418 taacatggatagtcattttaaggacaatattaatctttctaactctcatggatagtcattttaggtcattgttagttgttattaatcaaaaaatcaattt 517  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||||   |   |  ||| |||||||||||  |||| ||| |||||||    ||||    
T  21515043 taacatggatagtcattttagggacaatattaatcttcctaactctcatccttctcc--tttgggtcattgttacctgttcttagtcaaaaatcggattt 21514946  T
Q  518 tcgggctacttgatcagattgctccgaaactt 549  Q
    |||| |||||||||| ||||||||||||||||    
T  21514945 tcggactacttgatcggattgctccgaaactt 21514914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 205 - 355
Target Start/End: Original strand, 4893102 - 4893252
Alignment:
Q  205 gattttcggattttagaatccaaacttagttttttcttcgttatgatatggaaaaaatgattttttcaccatttcaaattttataattcgaaaacctcaa 304  Q
    ||||||||||||||| |||   |||| | ||||| ||| ||||||  ||| ||||||||| ||||||   | |||  |||||||||||| ||||||| ||    
T  4893102 gattttcggattttaaaatttgaactgattttttcctttgttatgggatgaaaaaaatgagtttttctttaattcggattttataattccaaaaccttaa 4893201  T
Q  305 aaaatatggcgttttcctttatttttccggattatagaatccgaacacccc 355  Q
    |||||| |  || ||||||  ||||| ||||||||||||||||||||||||    
T  4893202 aaaataggatgtgttccttgtttttttcggattatagaatccgaacacccc 4893252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 373 - 466
Target Start/End: Complemental strand, 7734383 - 7734290
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    |||||||||| ||||||||||||  ||||||| | ||||| ||| ||||| | || ||||||||| |||||||||||||||| |||||| ||||    
T  7734383 attatataattcgaactgtatcaatacaaattctaaacatgtttgtaacacgaattgtcattttatggacaatattaatcttcctaactatcat 7734290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 258 - 362
Target Start/End: Complemental strand, 10310591 - 10310486
Alignment:
Q  258 aaaatgattttttcaccatttcaaattttataattcgaaaacctcaaaaaatatggcgttttcctt-tatttttccggattatagaatccgaacaccccc 356  Q
    ||||||| |||||||| | ||  |||||||||||||||||| || |||||||| |||   |||||| | |||||  ||||||||||||||||||||||||    
T  10310591 aaaatgagtttttcacaaatttgaattttataattcgaaaatctaaaaaaatagggcacgttccttatttttttttggattatagaatccgaacaccccc 10310492  T
Q  357 taaaca 362  Q
    ||||||    
T  10310491 taaaca 10310486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 476 - 547
Target Start/End: Complemental strand, 14037921 - 14037850
Alignment:
Q  476 ttttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaac 547  Q
    |||||||||||||||||||||| ||| |||||||   | |||||| ||||||||||||||||||||| ||||    
T  14037921 ttttaggtcattgttagttgttcttagtcaaaaatctagttttcgtgctacttgatcagattgctccaaaac 14037850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 422 - 549
Target Start/End: Complemental strand, 10310439 - 10310314
Alignment:
Q  422 atggatagtcattttaaggacaatattaatctttctaactctcatggatagtc-attttaggtcattgttagttgttattaatcaaaaaatcaattttcg 520  Q
    ||||||||||| ||||||||| ||||||||||| |||||| ||||   |  || ||||||||| ||||| ||||||| | | |||||||  |||||||      
T  10310439 atggatagtcaatttaaggaccatattaatcttcctaactatcat---tcttctattttaggttattgtaagttgttctcagtcaaaaatccaattttta 10310343  T
Q  521 ggctacttgatcagattgctccgaaactt 549  Q
    ||||||||| |||||||| ||||||||||    
T  10310342 ggctacttggtcagattgttccgaaactt 10310314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 373 - 463
Target Start/End: Original strand, 5638964 - 5639054
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactct 463  Q
    |||||||||||||||||||||||||||| ||  | ||||| | | ||||||  |||| |||| || ||||||||||||||||  |||||||    
T  5638964 attatataatccgaactgtatcagcacatatcataaacatgtctgtaacatatatagccattctagggacaatattaatcttcttaactct 5639054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 256 - 310
Target Start/End: Complemental strand, 13896129 - 13896075
Alignment:
Q  256 aaaaaatgattttttcaccatttcaaattttataattcgaaaacctcaaaaaata 310  Q
    |||||| || |||||||||| ||||||||||||||| ||||||||| ||||||||    
T  13896129 aaaaaaagagtttttcaccaattcaaattttataatccgaaaacctaaaaaaata 13896075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 391 - 451
Target Start/End: Original strand, 9905234 - 9905295
Alignment:
Q  391 tatcagcacaaattttgaacatatttataacatggatagtcattttaagg-acaatattaat 451  Q
    |||||||||||||||| ||||| ||| ||||||||||| |||||||| || |||||||||||    
T  9905234 tatcagcacaaattttaaacatgtttgtaacatggataatcattttagggaacaatattaat 9905295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 406 - 459
Target Start/End: Original strand, 17501001 - 17501054
Alignment:
Q  406 tgaacatatttataacatggatagtcattttaaggacaatattaatctttctaa 459  Q
    ||||||| ||| ||||||| |||||||||||||||||| |||||||||| ||||    
T  17501001 tgaacatgtttgtaacatgaatagtcattttaaggacattattaatcttcctaa 17501054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 257 - 345
Target Start/End: Complemental strand, 29631101 - 29631015
Alignment:
Q  257 aaaaatgattttttcaccatttcaaattttataattcgaaaacctcaaaaaatatggcgttttcctttatttttccggattatagaatc 345  Q
    |||||||| ||||||| ||||||  |||||||||| |||| |||  |||||||| || |||||||||  ||||| ||||||||||||||    
T  29631101 aaaaatgagtttttcatcatttcggattttataatccgaacacc--aaaaaatagggtgttttccttgcttttttcggattatagaatc 29631015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 515 - 549
Target Start/End: Original strand, 9905357 - 9905391
Alignment:
Q  515 ttttcgggctacttgatcagattgctccgaaactt 549  Q
    |||||||||||||||||| ||||||||||||||||    
T  9905357 ttttcgggctacttgatcggattgctccgaaactt 9905391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 454
Target Start/End: Complemental strand, 14038019 - 14037938
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctt 454  Q
    ||||||||| |||||||||||||||||||||| |||   | ||| |||||||||||  |  ||||| ||| |||||||||||    
T  14038019 attatataacccgaactgtatcagcacaaattctgagtctctttgtaacatggataacctgtttaaagaccatattaatctt 14037938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 426 - 463
Target Start/End: Original strand, 32044537 - 32044574
Alignment:
Q  426 atagtcattttaaggacaatattaatctttctaactct 463  Q
    |||||||||||| |||||||||||||||| ||||||||    
T  32044537 atagtcattttagggacaatattaatcttcctaactct 32044574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 325 - 361
Target Start/End: Original strand, 9905156 - 9905192
Alignment:
Q  325 atttttccggattatagaatccgaacaccccctaaac 361  Q
    |||||||||||||| | ||||||||||||||||||||    
T  9905156 atttttccggattacataatccgaacaccccctaaac 9905192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 426 - 454
Target Start/End: Original strand, 17501236 - 17501264
Alignment:
Q  426 atagtcattttaaggacaatattaatctt 454  Q
    |||||||||||||||||||||||||||||    
T  17501236 atagtcattttaaggacaatattaatctt 17501264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 2e-35; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 205 - 549
Target Start/End: Complemental strand, 19110250 - 19109893
Alignment:
Q  205 gattttcggattttagaatccaaacttagttttttcttcgttatgatatggaaaaaatgattttttcaccatttcaaattttataattcgaaaacctcaa 304  Q
    ||||||||||||||||||||| |||| ||||||| ||| || |||   || |||||||||||||| ||||| ||   |||||||||| | |||| || ||    
T  19110250 gattttcggattttagaatccgaactgagtttttcctttgtcatggggtgaaaaaaatgattttt-caccaatttggattttataatccaaaaatctgaa 19110152  T
Q  305 aaaatatggcgttttcctttatttttccggattatagaatccgaacaccccctaaacaaacagtcacaa----------------ttatataatccgaac 388  Q
    |||||| ||||| |||||| |||||| | |||||||||||| || |||||||||||||  |  |  |||                ||||||||||| |||    
T  19110151 aaaatagggcgtgttccttgattttttctgattatagaatctgatcaccccctaaacaccctttttcaagggaaaaattgttcgattatataatccaaac 19110052  T
Q  389 tgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatagtcattttaggtcattg 488  Q
    | |||||||||||||||| || || ||| |||||||||| ||||||||||||| |||||||||||| |||||||||||   |  | ||||| ||||||||    
T  19110051 tatatcagcacaaattttaaatatctttgtaacatggatcgtcattttaaggataatattaatcttcctaactctcatcctt--ttattttgggtcattg 19109954  T
Q  489 ttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
    |||| |||| ||| |||||||  || |||| || |||||||||| ||||||||||||||||    
T  19109953 ttagctgttcttagtcaaaaatccagtttttggactacttgatcggattgctccgaaactt 19109893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 373 - 466
Target Start/End: Complemental strand, 17474851 - 17474758
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    |||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||  ||||||||||||||| |||||||||||    
T  17474851 attatataatccgaactgtatcagcacaaattttaaacatgtttgtaacatggatagtcattttagagacaatattaatcttcctaactctcat 17474758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 373 - 466
Target Start/End: Complemental strand, 32187921 - 32187828
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    |||||||||||||||||||||||||||||||||| || || ||| |||||||||||||||||||| |||||||||||||||| |||||||||||    
T  32187921 attatataatccgaactgtatcagcacaaattttaaatatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcat 32187828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 373 - 549
Target Start/End: Complemental strand, 41203238 - 41203064
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatag 472  Q
    ||||||||| |||||||||||||||||||||||| ||||| ||| |||||||||||||||||||| |||||||||||||||| |||||| ||||   |      
T  41203238 attatataaaccgaactgtatcagcacaaattttaaacatgtttgtaacatggatagtcattttatggacaatattaatcttcctaactttcatcctt-- 41203141  T
Q  473 tcattttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
       |||| |||||||||||  |||| ||| | ||||| |  |||||||||| |||||||| ||||||||||||||||    
T  41203140 ctgttttgggtcattgttacctgttcttagttaaaaattggattttcgggcaacttgatcggattgctccgaaactt 41203064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 373 - 466
Target Start/End: Complemental strand, 15995165 - 15995072
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    |||||||||| ||||||||||||||| ||||| | ||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  15995165 attatataattcgaactgtatcagcaaaaattctaaacatgtttgtaacatggatagtcattttatggacaatattaatctttctaactctcat 15995072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 373 - 466
Target Start/End: Complemental strand, 33452495 - 33452402
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    ||||||||||||||||||||| |||||||||| | ||||| ||| ||||||||||| |||||||| |||||||||||||||| |||||||||||    
T  33452495 attatataatccgaactgtattagcacaaattctaaacatgtttgtaacatggataatcattttagggacaatattaatcttcctaactctcat 33452402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 373 - 466
Target Start/End: Original strand, 39447264 - 39447357
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    |||||||||| | ||||||||||||||||||| | ||||| ||| ||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  39447264 attatataattcaaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttaaagacaatattaatcttcctaactctcat 39447357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 373 - 549
Target Start/End: Complemental strand, 41510480 - 41510307
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatag 472  Q
    ||||||||||| ||||||||||||||||| || | ||||| ||| ||||||| |||||||||||| |||||||||||||||| |||||||||||   |      
T  41510480 attatataatctgaactgtatcagcacaatttctaaacatgtttgtaacatg-atagtcattttagggacaatattaatcttcctaactctcatcctt-- 41510384  T
Q  473 tcattttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
       |||| ||||||||||| ||||| ||| | ||||| |   |||||||||||||||||| ||||||||||||||||    
T  41510383 ctgttttgggtcattgttacttgttcttagttaaaaactgggttttcgggctacttgatcggattgctccgaaactt 41510307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 373 - 466
Target Start/End: Complemental strand, 44465779 - 44465686
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    ||||||||||||||| |||||||||||||||| | ||||| ||| |||||||| ||||||||||| |||||||||||||||| |||||||||||    
T  44465779 attatataatccgaaatgtatcagcacaaattctaaacatgtttgtaacatggttagtcattttagggacaatattaatcttcctaactctcat 44465686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 374 - 549
Target Start/End: Original strand, 42478846 - 42479019
Alignment:
Q  374 ttatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatagt 473  Q
    |||||||||| ||| ||||||||||||||||||||   ||||| ||| || ||||  || ||||||||| ||||||||||| |||||||||||   ||      
T  42478846 ttatataatctgaaatgtatcagcacaaattttgagtttatttgtaatatagataaccagtttaaggaccatattaatcttcctaactctcatccttatg 42478945  T
Q  474 cattttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
      |||||||||||||||||  ||| | | ||||||| ||| ||||||||||||||||||||||||||| |||||||    
T  42478946 --ttttaggtcattgttagccgttctcagtcaaaaattcagttttcgggctacttgatcagattgctctgaaactt 42479019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 373 - 464
Target Start/End: Original strand, 42894479 - 42894570
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctc 464  Q
    |||||||| ||||||||||||||||||||||| | ||||| ||| ||||||||||| |||||||| |||||||||||||||| |||||||||    
T  42894479 attatatattccgaactgtatcagcacaaattctaaacatgtttctaacatggataatcattttagggacaatattaatcttcctaactctc 42894570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 373 - 463
Target Start/End: Complemental strand, 36948997 - 36948907
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactct 463  Q
    |||||||||||| ||||||||||||||||||  | ||||||||||||||||| ||||  |||||| |||||||||||||||| ||||||||    
T  36948997 attatataatccaaactgtatcagcacaaatcctaaacatatttataacatgtatagctattttagggacaatattaatcttcctaactct 36948907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 373 - 454
Target Start/End: Original strand, 5507521 - 5507602
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctt 454  Q
    |||||||||||||||||||||||||||||||| | ||||| ||| ||||||||||||||||||||   ||||||||||||||    
T  5507521 attatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttataaacaatattaatctt 5507602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 204 - 355
Target Start/End: Complemental strand, 33440707 - 33440554
Alignment:
Q  204 agattttcggattttagaatccaaacttagttttttcttcgttatgatatggaaaaaatga-ttttttcaccatttcaaattttataattcgaaaacctc 302  Q
    ||||||||  |||||||||||| |||| ||||||| ||| |||||   ||| ||||||||| ||||||||||| |||  |||||||||| ||||||||||    
T  33440707 agattttcaaattttagaatccgaactgagtttttcctttgttataggatgaaaaaaatgagttttttcaccaattcggattttataatccgaaaacctc 33440608  T
Q  303 aaaaaatatggcgttttccttta-tttttccggattatagaatccgaacacccc 355  Q
     ||||||| ||||| |||||| | ||||| |||||||||||||| ||| |||||    
T  33440607 taaaaatagggcgtgttccttgatttttttcggattatagaatctgaatacccc 33440554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 373 - 549
Target Start/End: Original strand, 35251032 - 35251206
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatag 472  Q
    |||||||||||| |||||||| |||||||||| |||   | ||| ||| |||||||| || ||||||||| |||||||||||  ||||||  ||   |      
T  35251032 attatataatccaaactgtattagcacaaattctgagtttgtttgtaatatggatagccagtttaaggaccatattaatcttcttaactcctatccttct 35251131  T
Q  473 tcattttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
      ||||||||||||||||||||||| ||| || ||||  |  |||||||||||||||||||||||||||||||||||    
T  35251132 --attttaggtcattgttagttgttcttagtcgaaaatccggttttcgggctacttgatcagattgctccgaaactt 35251206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 373 - 466
Target Start/End: Complemental strand, 45153843 - 45153750
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    ||||||||||  ||||||||||||||||| || | ||||| ||| |||||||||||||||||||| ||||||||||||||||  ||||||||||    
T  45153843 attatataatttgaactgtatcagcacaagttataaacatgtttgtaacatggatagtcattttagggacaatattaatcttcttaactctcat 45153750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 392 - 466
Target Start/End: Complemental strand, 17766862 - 17766788
Alignment:
Q  392 atcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    |||| ||| |||||||||||| ||| |||||| |||||||||||||||||||||||||||||| |||||||||||    
T  17766862 atcaacaccaattttgaacatgtttgtaacattgatagtcattttaaggacaatattaatcttcctaactctcat 17766788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 372 - 549
Target Start/End: Original strand, 45293742 - 45293916
Alignment:
Q  372 aattatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggata 471  Q
    |||||||||||| |||||||||||||||||||| ||| | || ||||||||||||||  |  |||||||   ||||||||||| |||||||||||   |     
T  45293742 aattatataatctgaactgtatcagcacaaattctgatc-taattataacatggataaccggtttaagggtcatattaatcttcctaactctcat--ctt 45293838  T
Q  472 gtcattttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
        ||||||||||||| |||||||| ||| |||||||  |  ||||||||||||||||||| ||||||| |||||||    
T  45293839 tctgttttaggtcattgctagttgttcttagtcaaaaatccggttttcgggctacttgatcatattgctctgaaactt 45293916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 373 - 549
Target Start/End: Original strand, 34517203 - 34517377
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatag 472  Q
    |||||||||||||||||||||||||||||||| | ||||| |   |||||||||||||||||||| | |||||||||||| |  ||||| ||||   |      
T  34517203 attatataatccgaactgtatcagcacaaattctaaacatgtcggtaacatggatagtcattttatgaacaatattaatcatcataactttcatcctt-- 34517300  T
Q  473 tcattttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
    |  |||| |||||||||||  |||| ||| ||||||| |   |||||||  ||||||||| ||||||||||||||||    
T  34517301 ttgttttgggtcattgttacctgttcttagtcaaaaattgggttttcggaatacttgatcggattgctccgaaactt 34517377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 373 - 466
Target Start/End: Original strand, 36875087 - 36875180
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    |||||||||||| |||||||| |||| ||||| | ||||  ||| |||||||||||||||||||| ||| |||||||||||| |||||||||||    
T  36875087 attatataatccaaactgtattagcataaattctaaacaagtttgtaacatggatagtcattttagggataatattaatcttcctaactctcat 36875180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 373 - 466
Target Start/End: Original strand, 8388753 - 8388846
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    |||||||| |||||| |||||||||||||||| | || || ||| |||||||||| | ||| ||| |||||||||||||||| |||||||||||    
T  8388753 attatatagtccgaaatgtatcagcacaaattctaaagatgtttgtaacatggattgccatcttatggacaatattaatcttcctaactctcat 8388846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 372 - 466
Target Start/End: Complemental strand, 27900667 - 27900573
Alignment:
Q  372 aattatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    |||||||||||| |||||||||||||||||||| |||   | |||||||||||||||  || ||||||||| |||||||| ||  ||||||||||    
T  27900667 aattatataatctgaactgtatcagcacaaattatgagtttgtttataacatggataaccagtttaaggaccatattaattttcttaactctcat 27900573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 476 - 549
Target Start/End: Complemental strand, 13704763 - 13704690
Alignment:
Q  476 ttttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
    |||||||| ||||||||||||| | | |||||||  | |||||||||||||||||||||||||||| |||||||    
T  13704763 ttttaggttattgttagttgttttcagtcaaaaatccgattttcgggctacttgatcagattgctctgaaactt 13704690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 373 - 466
Target Start/End: Complemental strand, 16750479 - 16750388
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    |||||||||| ||||||||||||||| ||||| | || || ||| ||| |||||||||||||||| | |||||||||||| |||||||||||||    
T  16750479 attatataattcgaactgtatcagcataaattct-aatatgtttgtaatatggatagtcattttaggaacaatattaatc-ttctaactctcat 16750388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 376 - 464
Target Start/End: Complemental strand, 25217825 - 25217736
Alignment:
Q  376 atataatccg-aactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctc 464  Q
    |||||||||| |||||||| |||||||||| | ||||| ||| || ||||||||||||||||  ||||||| |||||||| |||||||||    
T  25217825 atataatccggaactgtattagcacaaattctaaacatgtttgtagcatggatagtcattttggggacaattttaatcttcctaactctc 25217736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 401 - 466
Target Start/End: Complemental strand, 34519561 - 34519496
Alignment:
Q  401 aattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    |||| ||||||| ||| ||||||||||| ||||||||||||||||||||||||| |||||| ||||    
T  34519561 aattctgaacatgtttgtaacatggataatcattttaaggacaatattaatcttcctaactttcat 34519496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 373 - 454
Target Start/End: Complemental strand, 38066725 - 38066644
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctt 454  Q
    ||||||||| |||||| |||| | |||||||| | || || ||| ||| |||||||||||||||||||||||||||||||||    
T  38066725 attatataaaccgaacagtattaacacaaattctaaatatgtttgtaaaatggatagtcattttaaggacaatattaatctt 38066644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 374 - 549
Target Start/End: Original strand, 26228169 - 26228342
Alignment:
Q  374 ttatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatagt 473  Q
    ||||||||| ||||||||||||||| | ||| ||||  | ||| | |||||||||   | ||||| ||| ||||||||||| |||||||||||   |  |    
T  26228169 ttatataattcgaactgtatcagcatacattatgaatctgtttgtgacatggataactagtttaatgaccatattaatcttgctaactctcatcctt--t 26228266  T
Q  474 cattttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
      |||||||| ||||||||||||| ||| |||||||   | |||||| ||||||||||||||||  ||||||||||    
T  26228267 tgttttaggtaattgttagttgttcttagtcaaaaatctagttttcgagctacttgatcagattcgtccgaaactt 26228342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 420 - 549
Target Start/End: Original strand, 30763798 - 30763925
Alignment:
Q  420 acatggatagtcattttaaggacaatattaatctttctaactctcatggatagtcattttaggtcattgttagttgttattaatcaaaaaatcaattttc 519  Q
    |||| ||||||||||||| |||||||||||||||| |||||||||||   |     |||| |||||||||||| |||| ||| |||||||    |||||     
T  30763798 acatagatagtcattttatggacaatattaatcttcctaactctcat--ctttctgtttttggtcattgttagctgttcttagtcaaaaatctgattttt 30763895  T
Q  520 gggctacttgatcagattgctccgaaactt 549  Q
    |||| |||||||| ||||||||||||||||    
T  30763896 gggcaacttgatcggattgctccgaaactt 30763925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 256 - 362
Target Start/End: Complemental strand, 34519726 - 34519620
Alignment:
Q  256 aaaaaatgattttttcaccatttcaaattttataattcgaaaacctcaaaaaatatggcgttttcctttatttttccggattatagaatccgaacacccc 355  Q
    ||||||||| |||||||||| |||| |||||||||| |||||| ||||||||||| ||||   |  || ||||||  |||||||||||| | |||||||     
T  34519726 aaaaaatgagtttttcaccaattcagattttataatccgaaaatctcaaaaaatagggcgcgctatttaatttttttggattatagaatacaaacaccct 34519627  T
Q  356 ctaaaca 362  Q
    |||||||    
T  34519626 ctaaaca 34519620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 9847236 - 9847183
Alignment:
Q  401 aattttgaacatatttataacatggatagtcattttaaggacaatattaatctt 454  Q
    |||| ||||||| ||| |||||| ||||||||||||||||||||||||||||||    
T  9847236 aattctgaacatgtttgtaacattgatagtcattttaaggacaatattaatctt 9847183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 255 - 351
Target Start/End: Original strand, 34817059 - 34817155
Alignment:
Q  255 gaaaaaatga-ttttttcaccatttcaaattttataattcgaaaacctcaaaaaatatggcgttttcctttatttttccggattatagaatccgaaca 351  Q
    |||||||||| ||||||||||| || | |||| |||||||||||||||||||||||| | ||| || ||| || ||| |||||||||||| |||||||    
T  34817059 gaaaaaatgagttttttcaccaatttagattt-ataattcgaaaacctcaaaaaataggacgtgttacttgatgttttcggattatagaacccgaaca 34817155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 373 - 466
Target Start/End: Complemental strand, 41854951 - 41854863
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    ||||||||||  |||||||||||||||||||| | ||||| ||| |||     |||||||||| | |||||||||||||||| |||||||||||    
T  41854951 attatataatttgaactgtatcagcacaaattctaaacatgtttgtaa-----atagtcatttcagggacaatattaatcttcctaactctcat 41854863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 372 - 452
Target Start/End: Complemental strand, 3957954 - 3957874
Alignment:
Q  372 aattatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatc 452  Q
    |||||||||||||||||| ||| |||| ||||||| | ||| ||  |||||| |||||||| ||||||||| |||||||||    
T  3957954 aattatataatccgaactatattagcataaattttaagcatgttcgtaacattgatagtcactttaaggaccatattaatc 3957874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 257 - 354
Target Start/End: Complemental strand, 3958088 - 3957988
Alignment:
Q  257 aaaaatgattttttcaccatttcaaattttataattcgaaaacctcaaaaaatatggcgttttcc----tttatttttccggattatagaatccgaacac 352  Q
    |||||||| |||||||||| || ||||||||||||||||| ||| |||||| || ||||| ||||    ||| ||||| ||||||||||||| |||||||    
T  3958088 aaaaatgagtttttcaccaattaaaattttataattcgaacaccccaaaaagtagggcgtgttccttgtttttttttttcggattatagaat-cgaacac 3957990  T
Q  353 cc 354  Q
    ||    
T  3957989 cc 3957988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 388 - 460
Target Start/End: Complemental strand, 33440546 - 33440474
Alignment:
Q  388 ctgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaac 460  Q
    |||||||| |||||||| ||||||| ||| | ||||| | | |||||||||||| ||||||||||||||||||    
T  33440546 ctgtatcaacacaaattctgaacatgtttgttacatgaaaattcattttaaggataatattaatctttctaac 33440474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 408 - 459
Target Start/End: Complemental strand, 9847437 - 9847386
Alignment:
Q  408 aacatatttataacatggatagtcattttaaggacaatattaatctttctaa 459  Q
    ||||||||| |||| | |||||||||||||||||||||||||||||| ||||    
T  9847437 aacatatttgtaacgtcgatagtcattttaaggacaatattaatcttcctaa 9847386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 373 - 462
Target Start/End: Original strand, 33833857 - 33833943
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactc 462  Q
    ||||||||||||||||||||||| |||||||| ||| ||| |   || ||||||||| ||  |||||||| |||||||| ||||||||||    
T  33833857 attatataatccgaactgtatcatcacaaattatgagcatgt---tagcatggatagccagattaaggaccatattaatgtttctaactc 33833943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 418 - 546
Target Start/End: Complemental strand, 37773823 - 37773696
Alignment:
Q  418 taacatggatagtcattttaaggacaatattaatctttctaactctcatggatagtcattttaggtcattgttagttgttattaatcaaaaaatcaat-t 516  Q
    |||||||||||| || ||||||||| || ||||||||||||||||||||   |     |||||| ||||||||||||||| ||| ||||||   || | |    
T  37773823 taacatggatagccagtttaaggactatgttaatctttctaactctcatcctt--ctgttttagttcattgttagttgttcttagtcaaaagtccagtat 37773726  T
Q  517 ttcgggctacttgatcagattgctccgaaa 546  Q
    || |||||||||||||||||||||| ||||    
T  37773725 tttgggctacttgatcagattgctctgaaa 37773696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 205 - 354
Target Start/End: Original strand, 30763562 - 30763710
Alignment:
Q  205 gattttcggattttagaatccaaacttagttttttcttcgttatgatatggaaaaaatgattttttcaccatttcaaattttataattcgaaaacctcaa 304  Q
    ||||||| ||||||| ||||| |||| |||||||| || ||| | | |  ||||||||||  ||||||||| |||| |||||||||||||||||  |  |    
T  30763562 gattttcagattttaaaatccgaactgagttttttgtttgtttt-agagtgaaaaaatgaggttttcaccaattcacattttataattcgaaaaatttta 30763660  T
Q  305 aaaatatggcgttttcctttatttttccggattatagaatccgaacaccc 354  Q
    |||||| | ||  ||| || ||||||  |||||||| |||||||||||||    
T  30763661 aaaataggacgcgttcgttgatttttttggattatataatccgaacaccc 30763710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 385 - 466
Target Start/End: Original strand, 34817215 - 34817296
Alignment:
Q  385 gaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    ||||||||||||||| |||| ||||| | ||| |||||||||||  || | ||||||| ||||||||||| |||||| ||||    
T  34817215 gaactgtatcagcaccaattctgaacttgtttgtaacatggataaccaatgtaaggaccatattaatcttcctaactatcat 34817296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 406 - 454
Target Start/End: Original strand, 25715695 - 25715743
Alignment:
Q  406 tgaacatatttataacatggatagtcattttaaggacaatattaatctt 454  Q
    ||||||| ||| |||||| |||||||||||||| |||||||||||||||    
T  25715695 tgaacatgtttgtaacattgatagtcattttaaagacaatattaatctt 25715743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 362
Target Start/End: Complemental strand, 37773958 - 37773888
Alignment:
Q  294 gaaaacctcaaaaaatatggcgttttcctt--tatttttccggattatagaatccgaacaccccctaaaca 362  Q
    ||||||||||||||||| ||||  ||||||  | ||||| |||||||||||||| ||||||||| ||||||    
T  37773958 gaaaacctcaaaaaatagggcgcgttccttatttttttttcggattatagaatctgaacaccccttaaaca 37773888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 257 - 362
Target Start/End: Original strand, 2764481 - 2764584
Alignment:
Q  257 aaaaatgattttttcaccatttcaaattttataattcgaaaacctcaaaaaatatggcgttttcctttatttttccggattatagaatccgaacaccccc 356  Q
    |||||||  |||||||||| || | |||||||||| |||||||||||||||||| || |  ||||||  ||||| || |||||||||| || | |||||     
T  2764481 aaaaatgtgtttttcaccaatttagattttataatccgaaaacctcaaaaaatagggagcgttcctt--ttttttcgtattatagaatacggaaacccca 2764578  T
Q  357 taaaca 362  Q
    ||||||    
T  2764579 taaaca 2764584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 266 - 360
Target Start/End: Complemental strand, 38308969 - 38308875
Alignment:
Q  266 tttttcaccatttcaaattttataattcgaaaacctcaaaaaatatggcgttttcctttatttttccggattatagaatccgaacaccccctaaa 360  Q
    |||||||| | |||| ||| | |||| ||||||| |||||||||| ||||   |  || |||||||||||||||| |||||||||||||| ||||    
T  38308969 tttttcacaaattcagattatgtaatccgaaaacttcaaaaaatagggcgcgctatttgatttttccggattatataatccgaacaccccttaaa 38308875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 376 - 462
Target Start/End: Original strand, 41204037 - 41204123
Alignment:
Q  376 atataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactc 462  Q
    |||||||| ||||||||||| |||||||| ||||||| ||| |||| || ||| | |||||||||   |||||||| || |||||||    
T  41204037 atataatctgaactgtatcaacacaaattctgaacatgtttgtaacttgaatattgattttaagggttatattaattttcctaactc 41204123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 516 - 549
Target Start/End: Complemental strand, 38308743 - 38308710
Alignment:
Q  516 tttcgggctacttgatcagattgctccgaaactt 549  Q
    |||||||||||||||||||||||||| |||||||    
T  38308743 tttcgggctacttgatcagattgctctgaaactt 38308710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 418 - 454
Target Start/End: Complemental strand, 38308840 - 38308804
Alignment:
Q  418 taacatggatagtcattttaaggacaatattaatctt 454  Q
    |||||||||| ||||||||| ||||||||||||||||    
T  38308840 taacatggattgtcattttatggacaatattaatctt 38308804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 74; Significance: 1e-33; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 373 - 466
Target Start/End: Complemental strand, 53894082 - 53893989
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    |||||||||||||||||||||||||||||||| | ||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  53894082 attatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatctttctaactctcat 53893989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 373 - 466
Target Start/End: Complemental strand, 2506088 - 2505995
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    |||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||| |||||||||||||||| |||| ||||||    
T  2506088 attatataatccgaactgtatcagcacaaattttaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaattctcat 2505995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 373 - 466
Target Start/End: Original strand, 40703774 - 40703867
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    |||||||||||||||||||||||||||||||| | ||||| ||| |||||||||||||||||||| |||||||||||||||| |||||||||||    
T  40703774 attatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcat 40703867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 375 - 549
Target Start/End: Complemental strand, 41413153 - 41412981
Alignment:
Q  375 tatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatagtc 474  Q
    |||||||||||||||||||||||||||||  | ||||||||| ||||||| |||||||||||| | |||||||||||||| |||||||| ||   |  |     
T  41413153 tatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtatagtcattttaggaacaatattaatcttcctaactcttatcatt--tt 41413056  T
Q  475 attttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
     ||||||||||||||||  |||| |||||||||||     |||||||||||||||||||||||| || |||||||    
T  41413055 gttttaggtcattgttacatgttcttaatcaaaaatctggttttcgggctacttgatcagattgttctgaaactt 41412981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 372 - 549
Target Start/End: Complemental strand, 55052677 - 55052501
Alignment:
Q  372 aattatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggata 471  Q
    |||||||||||||||||| |||||||||||||| | ||||| ||| |||||||||||||||||||| ||||||| |||||||| |||||| ||||   |     
T  55052677 aattatataatccgaactttatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatgttaatcttcctaactatcatcctt- 55052579  T
Q  472 gtca-ttttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
      || |||| |||||||||||  |||| ||| |||||||   |||||||||||||||||||  ||||||||||||||||    
T  55052578 -ccattttttggtcattgttacctgttcttagtcaaaaatcgaattttcgggctacttgattggattgctccgaaactt 55052501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 373 - 466
Target Start/End: Original strand, 8106503 - 8106597
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcatttta-aggacaatattaatctttctaactctcat 466  Q
    |||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||| || ||||| ||||||||||||||||||||    
T  8106503 attatataatccgaactgtatcagcacaaattttaaacatgtttgtaacatggatagtcattttagagaacaatgttaatctttctaactctcat 8106597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 373 - 466
Target Start/End: Original strand, 19835630 - 19835723
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    |||||||||||||||||||||||||||||||| | ||||| ||| |||||||||||||||||||| | |||||||||||||| |||||||||||    
T  19835630 attatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttaggaacaatattaatcttcctaactctcat 19835723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 373 - 466
Target Start/End: Complemental strand, 48319121 - 48319028
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    |||||||||||||||||||||||||||||||| | ||||| ||| |||||| ||||||||||||| |||||||||||||||| |||||||||||    
T  48319121 attatataatccgaactgtatcagcacaaattctaaacatgtttgtaacattgatagtcattttagggacaatattaatcttcctaactctcat 48319028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 373 - 549
Target Start/End: Complemental strand, 25752501 - 25752326
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatag 472  Q
    ||||||| ||||||| ||||| |||||||||| | ||||| ||| |||||||||||||||||||||||||||||| |||||| ||| |||||||   ||     
T  25752501 attatatgatccgaaatgtattagcacaaattctaaacatgtttgtaacatggatagtcattttaaggacaatatcaatcttcctagctctcatcttta- 25752403  T
Q  473 tcattttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
    |  |||| ||| |||||||  |||| ||| |||||||     |||||||||||||||||||||||||||||||||||    
T  25752402 tgtttttgggtgattgttacctgttcttagtcaaaaatcgggttttcgggctacttgatcagattgctccgaaactt 25752326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 373 - 466
Target Start/End: Complemental strand, 25491452 - 25491359
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    ||||||||||| |||||||||||||||||||| | ||||| ||| ||||||| |||||||||||| |||||||||||||||| |||||||||||    
T  25491452 attatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatgaatagtcattttatggacaatattaatcttcctaactctcat 25491359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 373 - 549
Target Start/End: Complemental strand, 14474268 - 14474095
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatag 472  Q
    ||||||||||| ||| ||||||| |||||||||||||||| ||| ||||||||||||||  |||||| |||||||||||||| ||||| |||||   |      
T  14474268 attatataatctgaattgtatcaacacaaattttgaacatgtttgtaacatggatagtc-gtttaagaacaatattaatcttcctaaccctcatcctt-- 14474172  T
Q  473 tcattttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
      |||||||||||||||||  |||| || ||||||||  |  |||||  ||||||||||| ||||||||||||||||    
T  14474171 ctattttaggtcattgttacctgttcttgatcaaaaatcctgttttcaagctacttgatcggattgctccgaaactt 14474095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 373 - 466
Target Start/End: Complemental strand, 17933194 - 17933101
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    |||||||||||||||| ||||||||||||||| | ||||| ||| ||||||||||| |||||||| ||||| |||||||||| |||||||||||    
T  17933194 attatataatccgaacagtatcagcacaaattctaaacatgtttgtaacatggataatcattttagggacattattaatcttcctaactctcat 17933101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 373 - 549
Target Start/End: Original strand, 38536280 - 38536455
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatag 472  Q
    |||||||||||  || |||||| ||||||||| | ||||| ||| ||||||| |||||||||||| |||||||||||||||| |||||||||||  ||      
T  38536280 attatataatctaaattgtatctgcacaaattctaaacatgtttgtaacatgaatagtcattttatggacaatattaatcttcctaactctcat-tattc 38536378  T
Q  473 tcattttaggtcattgttagttgttattaatcaaaaaatcaa-ttttcgggctacttgatcagattgctccgaaactt 549  Q
    |  ||||||||||||||||  |||| ||| || ||||||||| ||||| |||||||||||| ||||| ||| ||||||    
T  38536379 tgtttttaggtcattgttacatgttcttagtc-aaaaatcaagttttcaggctacttgatcggattgttccaaaactt 38536455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 373 - 549
Target Start/End: Complemental strand, 6003730 - 6003556
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatag 472  Q
    |||||||||||||||||||||| ||||||||  | ||||||||| ||| ||| |||||||||||| ||| |||||||||||| |||||||| ||   |      
T  6003730 attatataatccgaactgtatcggcacaaatcataaacatatttttaatatgtatagtcattttagggataatattaatcttcctaactcttatcctt-- 6003633  T
Q  473 tcattttaggtcattgttagttgttattaatcaaaaaatca-attttcgggctacttgatcagattgctccgaaactt 549  Q
    |  |||| ||||||||||| ||||| ||| || ||||||||  |||||||||||||||||  |||||||| |||||||    
T  6003632 ttgttttgggtcattgttacttgttcttagtc-aaaaatcaggttttcgggctacttgattggattgctctgaaactt 6003556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 373 - 546
Target Start/End: Original strand, 7863551 - 7863722
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatag 472  Q
    ||||||||||| |||||||||| ||||||||| | ||||| ||| ||||||||| | |||||||||||||||||||||| || |||||| | ||   |      
T  7863551 attatataatctgaactgtatctgcacaaattctaaacatgtttgtaacatggacaatcattttaaggacaatattaatattcctaacttttatcctt-- 7863648  T
Q  473 tcattttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaa 546  Q
       ||||||||||||| ||  |||| ||||| ||||| ||  |||||||||||||| |||||||||||||||||    
T  7863649 ctgttttaggtcattggtaactgttcttaataaaaaattcggttttcgggctacttaatcagattgctccgaaa 7863722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 373 - 550
Target Start/End: Complemental strand, 31582479 - 31582304
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatag 472  Q
    ||||||||||| ||| |||||||||||||||| | ||||| ||| |||||||||||||||||||| | ||||| ||||| || |||||||||||   |      
T  31582479 attatataatctgaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttatgaacaatgttaattttcctaactctcatcctt-- 31582382  T
Q  473 tcattttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaacttg 550  Q
       |||| |||||||||||  |||| ||| |||||||   | ||||||||||| |||||| |||||||||||||||||    
T  31582381 ctgttttgggtcattgttacatgttcttagtcaaaaatctagttttcgggctaattgatcggattgctccgaaacttg 31582304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 373 - 463
Target Start/End: Original strand, 34972974 - 34973064
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactct 463  Q
    |||||||||||||||||||||||||| ||||  | ||||||||| ||||||| |||| ||||||| |||||||||||||||| ||||||||    
T  34972974 attatataatccgaactgtatcagcataaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactct 34973064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 373 - 466
Target Start/End: Original strand, 7931767 - 7931860
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    ||||||||||| ||||| ||| |||||||||| | ||||| ||| ||||||||||||| |||||| |||||||||||||||| |||||||||||    
T  7931767 attatataatctgaactatattagcacaaattctaaacatgtttgtaacatggatagttattttagggacaatattaatcttcctaactctcat 7931860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 373 - 466
Target Start/End: Original strand, 27879658 - 27879751
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    ||||||||||| |||||||||||||||||||| |||||||  || ||||||| || |||||||||||||| |||||||| || |||||||||||    
T  27879658 attatataatctgaactgtatcagcacaaattctgaacatgcttgtaacatgaatggtcattttaaggaccatattaatattcctaactctcat 27879751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 373 - 549
Target Start/End: Complemental strand, 46440331 - 46440155
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatag 472  Q
    ||||||||||||||||| |||||||||||||| | |||||  || ||||||||||| |||||||| |||||||| |||||||  ||||||||||   |      
T  46440331 attatataatccgaactatatcagcacaaattctaaacatggttgtaacatggatattcattttagggacaatactaatcttcataactctcat-ccttc 46440233  T
Q  473 tcattttaggtcattgtta--gttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
    || |||||| |||||||||    |||| |||||||||||    |||||||| |||||||||| ||||||||||||||||    
T  46440232 tc-ttttagatcattgttacctgtgttcttaatcaaaaatcggattttcggactacttgatcggattgctccgaaactt 46440155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 373 - 549
Target Start/End: Original strand, 32441920 - 32442094
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatag 472  Q
    |||||||||||| ||||||| ||||||| ||  | ||||||||| ||||||| |||  |||||||| ||||||||||||||| |||||||| ||   |      
T  32441920 attatataatccaaactgtaccagcacatatcgtaaacatatttgtaacatgtataaccattttaaagacaatattaatcttcctaactcttatcctt-- 32442017  T
Q  473 tcattttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
    |  |||| |||||||||||  |||| ||| |||||||   | |||||||||||||||||| |||||||| |||||||    
T  32442018 ttgttttgggtcattgttacctgttcttagtcaaaaatcgagttttcgggctacttgatcggattgctctgaaactt 32442094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 390 - 546
Target Start/End: Complemental strand, 41323132 - 41322978
Alignment:
Q  390 gtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatagtcattttaggtcattgt 489  Q
    |||||| |||||||| | ||||| ||| ||||||||||| |||||||| |||||||||||||||| |||||||||||   |  |  |||| |||||||||    
T  41323132 gtatcaacacaaattctaaacatgtttgtaacatggataatcattttatggacaatattaatcttcctaactctcatcctt--ttgtttttggtcattgt 41323035  T
Q  490 tagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaa 546  Q
    || ||||| ||| | ||||| | | |||||||  ||||||||| |||||||||||||    
T  41323034 taattgttcttagttaaaaattgagttttcggcatacttgatcggattgctccgaaa 41322978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 379 - 454
Target Start/End: Complemental strand, 25140766 - 25140691
Alignment:
Q  379 taatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctt 454  Q
    |||||||||| | |||||||| |||| ||||||| ||| ||||||||||||||||||| |||||||||||||||||    
T  25140766 taatccgaacagcatcagcaccaattctgaacatgtttgtaacatggatagtcattttgaggacaatattaatctt 25140691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 376 - 466
Target Start/End: Original strand, 47784101 - 47784191
Alignment:
Q  376 atataatccgaactgtatcagcacaaattttgaacata-tttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    |||||||||||||| |||||||||||||| | |||||  ||| ||| ||||||||||||||||||||||||||||||| | |||||||||||    
T  47784101 atataatccgaactatatcagcacaaattctaaacattgtttgtaatatggatagtcattttaaggacaatattaatc-tcctaactctcat 47784191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 373 - 451
Target Start/End: Original strand, 372029 - 372107
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaat 451  Q
    ||||||| |||  ||||||||||||||||||| ||| ||| ||||||||||||||||||||||||| ||| ||||||||    
T  372029 attatatcatctcaactgtatcagcacaaattatgagcatgtttataacatggatagtcattttaaagaccatattaat 372107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 25140951 - 25140898
Alignment:
Q  401 aattttgaacatatttataacatggatagtcattttaaggacaatattaatctt 454  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  25140951 aattttgaacatgtttgtaacatggatagtcattttaaggacaatattaatctt 25140898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 476 - 549
Target Start/End: Original strand, 47456811 - 47456884
Alignment:
Q  476 ttttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
    ||||||||||||||||| | || ||| ||||||| ||  |||||||||||||||||||||||||||||||||||    
T  47456811 ttttaggtcattgttagatattcttagtcaaaaattcggttttcgggctacttgatcagattgctccgaaactt 47456884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 374 - 466
Target Start/End: Complemental strand, 3703305 - 3703213
Alignment:
Q  374 ttatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    ||||||||| | ||||||||||||||||||| | ||||| ||| |||||| ||||||||||||| | | ||||||||||||  ||||||||||    
T  3703305 ttatataattcaaactgtatcagcacaaattctaaacatttttgtaacatagatagtcattttaggaagaatattaatcttcataactctcat 3703213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 390 - 466
Target Start/End: Complemental strand, 25539019 - 25538943
Alignment:
Q  390 gtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    ||||||||||||||| | ||||| ||| |||||||||||||||||||| ||||||||||||| ||  ||||||||||    
T  25539019 gtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaattttcttaactctcat 25538943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 373 - 463
Target Start/End: Complemental strand, 6228870 - 6228780
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactct 463  Q
    ||||||||||||||||||||||| | |||||  | || |||||  ||||||| |||| ||||||| |||||||||||||||| ||||||||    
T  6228870 attatataatccgaactgtatcaactcaaatcctaaagatattagtaacatgtatagccattttagggacaatattaatcttcctaactct 6228780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 205 - 307
Target Start/End: Complemental strand, 14474451 - 14474349
Alignment:
Q  205 gattttcggattttagaatccaaacttagttttttcttcgttatgatatggaaaaaatgattttttcaccatttcaaattttataattcgaaaacctcaa 304  Q
    ||||||| |||||||||||||||| | ||||||| |||  |||||  ||| ||||||||| || ||||||| |||  |||||||||| ||||||||||||    
T  14474451 gattttcagattttagaatccaaattgagtttttccttttttatgggatgaaaaaaatgagttcttcaccaattcggattttataatccgaaaacctcaa 14474352  T
Q  305 aaa 307  Q
    |||    
T  14474351 aaa 14474349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 256 - 362
Target Start/End: Original strand, 20083002 - 20083107
Alignment:
Q  256 aaaaaatgattttttcaccatttcaaattttataattcgaaaacctcaaaaaatatggcgttttcctttatttttccggattatagaatccgaacacccc 355  Q
    ||||| ||| |||||||||| |||  ||| |||||||| |||||||||||||||||||||| ||||  | ||||| || ||||||||||||||||| | |    
T  20083002 aaaaattgagtttttcaccaattcggattctataattcaaaaacctcaaaaaatatggcgtgttcc-atgttttttcgaattatagaatccgaacaactc 20083100  T
Q  356 ctaaaca 362  Q
    |||||||    
T  20083101 ctaaaca 20083107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 372 - 437
Target Start/End: Original strand, 38416936 - 38417002
Alignment:
Q  372 aattatataatccgaactgtatcagcacaaattttgaacatatttataaca-tggatagtcatttta 437  Q
    |||||||||||| |||||||||||||||||||||| ||||| ||| ||||| |||||||||||||||    
T  38416936 aattatataatctgaactgtatcagcacaaattttaaacatgtttgtaacattggatagtcatttta 38417002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 375 - 466
Target Start/End: Complemental strand, 27742169 - 27742077
Alignment:
Q  375 tatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaagg-acaatattaatctttctaactctcat 466  Q
    ||||||||  ||| |||||||||||||||||| ||||| ||| ||||||  ||||| |||||| || |||||||||||||| |||||||||||    
T  27742169 tatataatttgaattgtatcagcacaaattttaaacatgtttgtaacataaatagttattttagggaacaatattaatcttcctaactctcat 27742077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 266 - 362
Target Start/End: Complemental strand, 55433899 - 55433803
Alignment:
Q  266 tttttcaccatttcaaattttataattcgaaaacctcaaaaaatatggcgttttcctttatttttccggattatagaatccgaacaccccctaaaca 362  Q
    |||||||||  ||| |||||||||||||||| |||  ||||||||||| || ||||||  |||||  |||||||||||||| ||||||| |||||||    
T  55433899 tttttcaccgattcgaattttataattcgaacaccctaaaaaatatggtgtgttccttactttttttggattatagaatccaaacacccactaaaca 55433803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 256 - 354
Target Start/End: Original strand, 7863208 - 7863306
Alignment:
Q  256 aaaaaatgattttttcaccatttcaaattttataattcgaaaacctcaaaaaatatggcgttttcctttatttttccggattatagaatccgaacaccc 354  Q
    |||||| || |||||||||| ||   ||||||||||| ||||||||||||||||| ||||  || ||| | |||| | |||||||||||||||||||||    
T  7863208 aaaaaaagagtttttcaccaatttggattttataatttgaaaacctcaaaaaatagggcgcgttacttaagtttttcagattatagaatccgaacaccc 7863306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 392 - 466
Target Start/End: Complemental strand, 25140544 - 25140470
Alignment:
Q  392 atcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    |||| ||| |||| ||||||| ||| ||||||| ||| |||||||||| |||||||||||||| |||||||||||    
T  25140544 atcaacaccaattctgaacatgtttgtaacatgtataatcattttaagaacaatattaatcttcctaactctcat 25140470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 408 - 454
Target Start/End: Original strand, 47873955 - 47874001
Alignment:
Q  408 aacatatttataacatggatagtcattttaaggacaatattaatctt 454  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||    
T  47873955 aacatgtttataacatggatagtcattttagggacaatattaatctt 47874001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 372 - 462
Target Start/End: Complemental strand, 49002912 - 49002822
Alignment:
Q  372 aattatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactc 462  Q
    ||||||||| ||| |||| |||||||||||||| | || || ||| ||||||  |||||||||||| ||| |||||||||||| |||||||    
T  49002912 aattatatattccaaactatatcagcacaaattctaaatatgtttgtaacataaatagtcattttatggaaaatattaatcttcctaactc 49002822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 373 - 439
Target Start/End: Complemental strand, 53836275 - 53836209
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaag 439  Q
    |||||||||||||||||||||||  | ||||| ||||| |||||  |||||||||||||||||||||    
T  53836275 attatataatccgaactgtatcaatataaattatgaacctatttgcaacatggatagtcattttaag 53836209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 373 - 466
Target Start/End: Complemental strand, 42497933 - 42497840
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    ||||||||||| ||| |||||||||||||||| ||| | | ||| |||| |  ||||  | ||||||||| |||||||||||||||||||||||    
T  42497933 attatataatctgaattgtatcagcacaaattatgagcttgtttgtaacttatatagctagtttaaggaccatattaatctttctaactctcat 42497840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 393 - 466
Target Start/End: Original strand, 52089315 - 52089388
Alignment:
Q  393 tcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    ||||||||||| || ||||| ||| |||||||||||||||||||  ||||||||||||| || |||||| ||||    
T  52089315 tcagcacaaatcttaaacatgtttgtaacatggatagtcatttttgggacaatattaattttcctaactttcat 52089388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 255 - 323
Target Start/End: Complemental strand, 29515552 - 29515484
Alignment:
Q  255 gaaaaaatgattttttcaccatttcaaattttataattcgaaaacctcaaaaaatatggcgttttcctt 323  Q
    |||||||||| |||||||||| || | |||||||||| |||||||||||||||||| || || ||||||    
T  29515552 gaaaaaatgagtttttcaccaatttagattttataatccgaaaacctcaaaaaatagggtgtgttcctt 29515484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 373 - 549
Target Start/End: Original strand, 37222071 - 37222244
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatag 472  Q
    ||||||||||  ||| |||||||||| ||||| | ||||| ||| |||||||||||  || ||||||||| ||||||||  |||| | ||||||  ||      
T  37222071 attatataatttgaattgtatcagcataaattctaaacatgtttgtaacatggataaccactttaaggaccatattaattcttcttaatctcat-cattc 37222169  T
Q  473 tcattttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
    |  |||| ||||||||||||||||| ||| | ||||| ||  || ||||| ||| ||||||||||||||||||||||    
T  37222170 t-gttttgggtcattgttagttgttcttagtaaaaaattcggttctcggggtac-tgatcagattgctccgaaactt 37222244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 255 - 362
Target Start/End: Complemental strand, 53836409 - 53836302
Alignment:
Q  255 gaaaaaatgattttttcaccatttcaaattttataattcgaaaacctcaaaaaatatggcgttttcctttatttttccggattatagaatccgaacaccc 354  Q
    ||||||| || ||||||| || ||| |||||||||||  ||| ||| ||||||||| | ||| ||||||  ||||| |||||||||| ||||||||| |     
T  53836409 gaaaaaaggagtttttcatcaattcgaattttataatctgaacaccccaaaaaataggacgtgttccttgcttttttcggattatagtatccgaacaacg 53836310  T
Q  355 cctaaaca 362  Q
    ||||||||    
T  53836309 cctaaaca 53836302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 476 - 550
Target Start/End: Original strand, 29822791 - 29822865
Alignment:
Q  476 ttttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaacttg 550  Q
    |||| |||||||||||  |||| ||||||||||| |  ||||||||||||||||||| ||||||||  |||||||    
T  29822791 ttttgggtcattgttacatgttcttaatcaaaaattggattttcgggctacttgatcggattgctcaaaaacttg 29822865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 389 - 451
Target Start/End: Original strand, 32600966 - 32601028
Alignment:
Q  389 tgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaat 451  Q
    |||||||||||||||| |||||||  || ||||||||  ||||||||||||||| ||||||||    
T  32600966 tgtatcagcacaaattctgaacatgcttgtaacatggccagtcattttaaggaccatattaat 32601028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 256 - 316
Target Start/End: Original strand, 20078524 - 20078584
Alignment:
Q  256 aaaaaatgattttttcaccatttcaaattttataattcgaaaacctcaaaaaatatggcgt 316  Q
    ||||| ||| |||||||||| |||  ||| |||||||| ||||||||||||||||||||||    
T  20078524 aaaaattgagtttttcaccaattcggattctataattcaaaaacctcaaaaaatatggcgt 20078584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 394 - 454
Target Start/End: Complemental strand, 42660411 - 42660351
Alignment:
Q  394 cagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctt 454  Q
    |||||| |||| ||| ||| ||| ||| || ||||||||||||||||||||||||||||||    
T  42660411 cagcaccaattctgagcatgtttgtaatattgatagtcattttaaggacaatattaatctt 42660351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 186 - 362
Target Start/End: Original strand, 47456507 - 47456683
Alignment:
Q  186 ctttcaaaaatgttcttaagattttcggattttagaatccaaacttagttttttcttcgttatgatatggaaaaaatgattttttcaccatttcaaattt 285  Q
    ||||| ||||||| ||| ||||||| |||||||  ||||| |||| |||||||  || ||||||   || |||||| || ||||||||   ||   ||||    
T  47456507 ctttcgaaaatgtccttgagatttttggattttgaaatccgaactgagtttttcatttgttatggcgtgaaaaaaaagagtttttcacatatttggattt 47456606  T
Q  286 tataattcgaaaacctcaaaaaatatggcgttttcctttatttttccggattatagaatccgaacaccccctaaaca 362  Q
    ||| || | |||||||||||||||| || |  ||||||  ||||| ||||||||| |||| |||||| |||||||||    
T  47456607 tatgatccaaaaacctcaaaaaatagggagcgttccttgtttttttcggattataaaatcggaacacgccctaaaca 47456683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 514 - 549
Target Start/End: Complemental strand, 18051107 - 18051072
Alignment:
Q  514 attttcgggctacttgatcagattgctccgaaactt 549  Q
    |||||||| |||||||||||||||||||||||||||    
T  18051107 attttcggactacttgatcagattgctccgaaactt 18051072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 373 - 404
Target Start/End: Original strand, 29822729 - 29822760
Alignment:
Q  373 attatataatccgaactgtatcagcacaaatt 404  Q
    ||||||||||||||||||||||||||||||||    
T  29822729 attatataatccgaactgtatcagcacaaatt 29822760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 515 - 549
Target Start/End: Complemental strand, 2505948 - 2505914
Alignment:
Q  515 ttttcgggctacttgatcagattgctccgaaactt 549  Q
    |||||||||||||||||| ||||||||||||||||    
T  2505948 ttttcgggctacttgatcggattgctccgaaactt 2505914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 401 - 435
Target Start/End: Complemental strand, 7794232 - 7794198
Alignment:
Q  401 aattttgaacatatttataacatggatagtcattt 435  Q
    |||||||||||||||||||||||||||| ||||||    
T  7794232 aattttgaacatatttataacatggatattcattt 7794198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 362
Target Start/End: Original strand, 39118096 - 39118201
Alignment:
Q  257 aaaaatgattttttcaccatttcaaattttataattcgaaaacctcaaaaaatatggcgttttcctttatttttccggattatagaatccgaacaccccc 356  Q
    |||||||| ||||| |||| |||  |||||||||||| || ||| ||||||||| |||   ||||||  |||||  | |||||| ||||||||||||| |    
T  39118096 aaaaatgagtttttaaccaattcggattttataattcaaacaccccaaaaaatagggctcgttccttgctttttttgaattataaaatccgaacaccctc 39118195  T
Q  357 taaaca 362  Q
    ||||||    
T  39118196 taaaca 39118201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 362
Target Start/End: Complemental strand, 42497990 - 42497961
Alignment:
Q  333 ggattatagaatccgaacaccccctaaaca 362  Q
    ||||||||||||||||||||||||||||||    
T  42497990 ggattatagaatccgaacaccccctaaaca 42497961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 476 - 549
Target Start/End: Complemental strand, 48095823 - 48095750
Alignment:
Q  476 ttttaggtcattgttagttgttattaatcaaaaaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
    ||||||||||||||||||| || ||| |||||||     |||||||||||||| |||| |||||| ||||||||    
T  48095823 ttttaggtcattgttagttatttttagtcaaaaatctggttttcgggctactttatcatattgcttcgaaactt 48095750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 373 - 461
Target Start/End: Complemental strand, 346222 - 346135
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaact 461  Q
    |||||| |||| ||||||||||| ||||||||  || | ||||| |||||||||||| || |||||||   ||||||||||| ||||||    
T  346222 attatagaatctgaactgtatcaacacaaattacga-cttatttgtaacatggataggcaatttaagggtcatattaatcttcctaact 346135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 282 - 362
Target Start/End: Complemental strand, 3703414 - 3703334
Alignment:
Q  282 attttataattcgaaaacctcaaaaaatatggcgttttcctttatttttccggattatagaatccgaacaccccctaaaca 362  Q
    ||||| |||| ||||||| |||||||||| | ||| || | | |||||| ||||||| | ||| |||||||||||||||||    
T  3703414 attttgtaatccgaaaacttcaaaaaataggacgtgttacatgattttttcggattacataattcgaacaccccctaaaca 3703334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 514 - 546
Target Start/End: Complemental strand, 49001478 - 49001446
Alignment:
Q  514 attttcgggctacttgatcagattgctccgaaa 546  Q
    ||||||||||||||||||| |||||||||||||    
T  49001478 attttcgggctacttgatcggattgctccgaaa 49001446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 66; Significance: 8e-29; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 373 - 462
Target Start/End: Complemental strand, 142020 - 141931
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactc 462  Q
    |||||||||||||||||||||||||||||||| | ||||| ||| |||||||||||||||||||| |||||||||||||||| |||||||    
T  142020 attatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactc 141931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 373 - 549
Target Start/End: Complemental strand, 3452 - 3277
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatag 472  Q
    ||||||||||| |||||||||| || |||||| | ||||| ||| |||||| |||| |||||||| ||||||||||||||||  ||||||||||   |      
T  3452 attatataatctgaactgtatcggcgcaaattctaaacatgtttgtaacatcgataatcattttagggacaatattaatcttcgtaactctcatcctt-- 3355  T
Q  473 tcattttaggtcattgttagttgttattaatcaaaaaatca-attttcgggctacttgatcagattgctccgaaactt 549  Q
       |||| ||||||||||| ||||| ||| | |||||||||  ||||||||||||||||||||||||||| |||||||    
T  3354 ctgttttgggtcattgttacttgttcttagtaaaaaaatcaggttttcgggctacttgatcagattgctctgaaactt 3277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 373 - 466
Target Start/End: Complemental strand, 9554 - 9461
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    |||||||||||||||||||||||||| ||||| |  |||| ||| |||||||||||||||||||| ||||||||||||| ||| ||||| ||||    
T  9554 attatataatccgaactgtatcagcataaattctatacatgtttgtaacatggatagtcattttatggacaatattaatatttataactttcat 9461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 408 - 549
Target Start/End: Original strand, 140622 - 140761
Alignment:
Q  408 aacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcatggatagtcattttaggtcattgttagttgttattaatcaaa 507  Q
    ||||| ||| |||||| ||||||||||||| |||||||||||||||| |||||||||||   |  |  |||||||||||||||| ||||| ||| |||||    
T  140622 aacatgtttgtaacattgatagtcattttagggacaatattaatcttcctaactctcatcctt--ttgttttaggtcattgttacttgttcttagtcaaa 140719  T
Q  508 aaatcaattttcgggctacttgatcagattgctccgaaactt 549  Q
    ||     ||||| | |||||||||| ||||||||||||||||    
T  140720 aatcgggttttcagactacttgatcggattgctccgaaactt 140761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 46; Significance: 7e-17; HSPs: 2)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 373 - 454
Target Start/End: Original strand, 4473 - 4554
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctt 454  Q
    ||||||||||| |||||||||| ||||||||||||||| | ||| ||| || |||||||||||||| ||| |||||||||||    
T  4473 attatataatctgaactgtatcggcacaaattttgaacctgtttgtaaaatagatagtcattttaaagaccatattaatctt 4554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 326 - 362
Target Start/End: Original strand, 4408 - 4444
Alignment:
Q  326 tttttccggattatagaatccgaacaccccctaaaca 362  Q
    ||||||| |||||||||| ||||||||||||||||||    
T  4408 tttttccagattatagaaaccgaacaccccctaaaca 4444  T

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Target: scaffold0400 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 205 - 355
Target Start/End: Original strand, 9100 - 9249
Alignment:
Q  205 gattttcggattttagaatccaaacttagttttttcttcgttatgatatggaaaaaatgattttttcaccatttcaaattttataattcgaaaacctcaa 304  Q
    |||||||  |||||| |||| ||| | ||||||||||| ||||||  ||  ||||||||| |||||||||  |||  |||||||||| | ||||||||||    
T  9100 gattttcaaattttataatctaaattgagttttttctttgttatgggattaaaaaaatgaatttttcaccggttcggattttataatccaaaaacctcaa 9199  T
Q  305 aaaatatggcgttttcctttatttttccggattatagaatccgaacacccc 355  Q
     ||||| ||||| |||| ||| ||||  ||||||||||||||||| |||||    
T  9200 gaaatagggcgtgttcc-ttacttttttggattatagaatccgaatacccc 9249  T

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Target: scaffold0365 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 205 - 355
Target Start/End: Original strand, 9743 - 9892
Alignment:
Q  205 gattttcggattttagaatccaaacttagttttttcttcgttatgatatggaaaaaatgattttttcaccatttcaaattttataattcgaaaacctcaa 304  Q
    |||||||  |||||| |||| ||| | ||||||||||| ||||||  ||  ||||||||| |||||||||  |||  |||||||||| | ||||||||||    
T  9743 gattttcaaattttataatctaaattgagttttttctttgttatgggattaaaaaaatgaatttttcaccggttcggattttataatccaaaaacctcaa 9842  T
Q  305 aaaatatggcgttttcctttatttttccggattatagaatccgaacacccc 355  Q
     ||||| ||||| |||| ||| ||||  ||||||||||||||||| |||||    
T  9843 gaaatagggcgtgttcc-ttacttttttggattatagaatccgaatacccc 9892  T

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Target: scaffold0182 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 408 - 466
Target Start/End: Original strand, 23239 - 23297
Alignment:
Q  408 aacatatttataacatggatagtcattttaaggacaatattaatctttctaactctcat 466  Q
    ||||| ||| |||||||||||||||||||| |||||||||||||||| |||||||||||    
T  23239 aacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcat 23297  T

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Target: scaffold0014 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 373 - 462
Target Start/End: Complemental strand, 100970 - 100881
Alignment:
Q  373 attatataatccgaactgtatcagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctttctaactc 462  Q
    |||||||||| | | ||||||| | ||| ||||||||||| ||||||||||  ||||||| ||||||| | |||| |||||| |||||||    
T  100970 attatataattcaacctgtatcggtacagattttgaacatgtttataacatatatagtcagtttaagggccatatcaatcttcctaactc 100881  T

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Target: scaffold0016 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 394 - 454
Target Start/End: Complemental strand, 205842 - 205782
Alignment:
Q  394 cagcacaaattttgaacatatttataacatggatagtcattttaaggacaatattaatctt 454  Q
    |||||| |||| ||||||| ||| |||||| | ||||||||||||||| ||||||||||||    
T  205842 cagcaccaattctgaacatgtttgtaacattggtagtcattttaaggataatattaatctt 205782  T

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