View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4121_high_7 (Length: 220)
Name: NF4121_high_7
Description: NF4121
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4121_high_7 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 11 - 220
Target Start/End: Complemental strand, 8230207 - 8229998
Alignment:
| Q |
11 |
cagagaggaccatgctttcgagttggtaaaacatatagcatctctaaatgggattcaagttatgaagttgaacttggattggataaaaaccaaccatata |
110 |
Q |
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| T |
8230207 |
cagaaaggaccatgctttcgagttggtaaaacatatagcatctctaaatgggattcaagttatgaagttgaacttggattggataaaaaccaaccatata |
8230108 |
T |
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| Q |
111 |
attataaaatagaaagcagcacttgcaagccagcttgcaaaataatggacaagaatggagtgatagttgcagaggtaattaagatctctaacattttttc |
210 |
Q |
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| T |
8230107 |
attataaaatagaaagcagcacttgcaagccagcttgcaaaataatggacaagaatggagtgatagttgcagaggtaattaagatttctaacattttttc |
8230008 |
T |
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| Q |
211 |
agcaaagttt |
220 |
Q |
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|||||||||| |
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| T |
8230007 |
agcaaagttt |
8229998 |
T |
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