View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4121_low_1 (Length: 502)
Name: NF4121_low_1
Description: NF4121
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4121_low_1 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 472; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 472; E-Value: 0
Query Start/End: Original strand, 19 - 502
Target Start/End: Original strand, 34077610 - 34078093
Alignment:
| Q |
19 |
ctgggtgcatgcggaaagtttcacgtacaacacatcgtaggtaattaaggttaggcaaatcagattcaatcaccattctattagggccaaccactacatc |
118 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34077610 |
ctggatgcatgcggaaagtttcacgtacaacacatcgtaggtaattaaggttaggcaaatcagattcaatcaccattctattagggccaaccactacatc |
34077709 |
T |
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| Q |
119 |
aagctcttcttggattttgtgaaggacgtgtggatgtttgattacctctgtcatcgcccattcattagtaacggctgaagtgtccgttgcagccgcgatc |
218 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
34077710 |
aagctcttcttggattttgtgaagaacgtgtggatgtttgattacctctgtcatcgcccattcattagtaacggctgaagtgtctgttgcagccgcgatc |
34077809 |
T |
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| Q |
219 |
atgtcctaaatatttagtataactacattattttcaatcattacatgaaaaattaaacaaaattaatagagaaaaagtcatacctgaatcaaagctttta |
318 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34077810 |
atgtcctaaatatttagtataactacattattttcaatcattacatgaaaaattaaacaaaattaatagagaaaaagtcatacctgaatcaaagctttta |
34077909 |
T |
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| Q |
319 |
tctcaacatcatccatatgctcttttccatcttcaccaggcaaagacaataaaatatccacaaaatcaagttcttcatcactttttcctatccctttctt |
418 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34077910 |
tctcaacatcatccatatgctcttttccatcttcaccaggcaaagacaataaaatatccacaaaatcaagttcttcatcactttttcctatccctttctt |
34078009 |
T |
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| Q |
419 |
atctttccttgcctttctatgttcttcaagaattttggagtgaaagtcatcaactcttttttctacttccctcattttcttctc |
502 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34078010 |
atctttccttgcctttctatgttcttcaagaattttggagtgaaagtcatcaactcttttttctacttccctcattttcttctc |
34078093 |
T |
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