View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4125_low_10 (Length: 673)

Name: NF4125_low_10
Description: NF4125
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4125_low_10
NF4125_low_10
[»] chr7 (44 HSPs)
chr7 (450-589)||(11683490-11683631)
chr7 (308-454)||(11683273-11683427)
chr7 (308-439)||(38613883-38614014)
chr7 (308-434)||(33038260-33038386)
chr7 (308-439)||(2167892-2168030)
chr7 (307-436)||(46995542-46995678)
chr7 (307-439)||(47340725-47340857)
chr7 (142-264)||(11683069-11683192)
chr7 (450-586)||(34784683-34784821)
chr7 (323-408)||(23954432-23954517)
chr7 (307-439)||(3690910-3691049)
chr7 (450-571)||(48705198-48705321)
chr7 (313-375)||(31914645-31914707)
chr7 (450-556)||(36756290-36756400)
chr7 (450-556)||(36762087-36762197)
chr7 (314-369)||(23965669-23965724)
chr7 (392-454)||(19710572-19710634)
chr7 (450-556)||(3690723-3690833)
chr7 (449-532)||(12903713-12903795)
chr7 (497-565)||(23954649-23954721)
chr7 (450-556)||(47340538-47340648)
chr7 (313-381)||(6058038-6058106)
chr7 (313-381)||(25972142-25972210)
chr7 (313-381)||(46866926-46866994)
chr7 (450-559)||(46995348-46995461)
chr7 (461-581)||(38614103-38614227)
chr7 (450-581)||(2168108-2168243)
chr7 (597-665)||(10259691-10259759)
chr7 (450-554)||(33038070-33038178)
chr7 (308-439)||(36756074-36756212)
chr7 (308-439)||(36761871-36762009)
chr7 (450-571)||(7402784-7402906)
chr7 (459-556)||(45464320-45464419)
chr7 (459-556)||(48303025-48303124)
chr7 (190-250)||(48455266-48455326)
chr7 (196-263)||(1546619-1546686)
chr7 (221-264)||(48704528-48704571)
chr7 (203-264)||(8423004-8423065)
chr7 (536-565)||(27956723-27956752)
chr7 (333-381)||(48457063-48457112)
chr7 (461-489)||(19711980-19712008)
chr7 (459-556)||(30109449-30109548)
chr7 (483-554)||(40785004-40785080)
chr7 (308-380)||(46811529-46811601)
[»] chr4 (33 HSPs)
chr4 (310-454)||(39294301-39294452)
chr4 (308-454)||(230969-231112)
chr4 (449-557)||(10543995-10544104)
chr4 (308-434)||(51041503-51041629)
chr4 (450-572)||(25994538-25994662)
chr4 (308-407)||(44557396-44557495)
chr4 (314-375)||(27383316-27383377)
chr4 (313-374)||(50132666-50132727)
chr4 (307-407)||(2349473-2349580)
chr4 (455-558)||(4614408-4614512)
chr4 (307-381)||(35997031-35997104)
chr4 (308-381)||(10371617-10371690)
chr4 (308-381)||(10767406-10767479)
chr4 (335-454)||(9590683-9590801)
chr4 (313-381)||(44973670-44973738)
chr4 (459-555)||(42880140-42880238)
chr4 (450-532)||(2828064-2828146)
chr4 (450-532)||(27626137-27626219)
chr4 (459-556)||(39084289-39084388)
chr4 (450-486)||(39294515-39294551)
chr4 (459-556)||(43779243-43779342)
chr4 (450-489)||(13438273-13438312)
chr4 (209-264)||(25993847-25993902)
chr4 (450-558)||(7150307-7150416)
chr4 (329-381)||(231096-231149)
chr4 (536-581)||(4519814-4519859)
chr4 (462-556)||(5485191-5485287)
chr4 (598-631)||(13269375-13269408)
chr4 (598-631)||(13959499-13959532)
chr4 (459-556)||(39189955-39190054)
chr4 (459-556)||(39922143-39922242)
chr4 (450-518)||(44557218-44557286)
chr4 (459-556)||(44993664-44993763)
[»] chr1 (28 HSPs)
chr1 (307-439)||(45379843-45379975)
chr1 (449-586)||(42558964-42559102)
chr1 (307-436)||(31802781-31802910)
chr1 (307-381)||(46637707-46637781)
chr1 (307-439)||(44158483-44158622)
chr1 (308-439)||(33680000-33680138)
chr1 (307-439)||(42135437-42135576)
chr1 (450-559)||(46637452-46637565)
chr1 (452-555)||(18183341-18183448)
chr1 (450-553)||(31802990-31803097)
chr1 (313-366)||(42559269-42559323)
chr1 (458-556)||(42135661-42135763)
chr1 (450-556)||(44158699-44158809)
chr1 (313-381)||(43869875-43869943)
chr1 (308-375)||(51545888-51545956)
chr1 (450-532)||(6576513-6576595)
chr1 (450-558)||(3370227-3370336)
chr1 (450-556)||(33679812-33679922)
chr1 (450-556)||(45379656-45379766)
chr1 (308-381)||(47264687-47264760)
chr1 (452-556)||(5783995-5784101)
chr1 (313-362)||(18063867-18063917)
chr1 (598-654)||(51110839-51110895)
chr1 (450-532)||(35478686-35478768)
chr1 (597-631)||(50058050-50058084)
chr1 (209-262)||(51122245-51122298)
chr1 (591-631)||(24549759-24549799)
chr1 (452-571)||(51122813-51122935)
[»] chr8 (39 HSPs)
chr8 (450-589)||(25371348-25371489)
chr8 (307-381)||(33749285-33749359)
chr8 (449-589)||(10771043-10771184)
chr8 (308-381)||(38882218-38882291)
chr8 (307-386)||(31822559-31822638)
chr8 (307-408)||(1321505-1321613)
chr8 (308-381)||(33159485-33159558)
chr8 (307-439)||(24527573-24527711)
chr8 (450-589)||(12515996-12516135)
chr8 (386-452)||(10269038-10269104)
chr8 (386-452)||(11031930-11031996)
chr8 (450-565)||(42895432-42895551)
chr8 (450-558)||(17807593-17807702)
chr8 (450-559)||(31822775-31822888)
chr8 (450-526)||(38881999-38882075)
chr8 (313-375)||(37803230-37803293)
chr8 (308-381)||(462006-462079)
chr8 (386-454)||(9186133-9186202)
chr8 (450-559)||(33749022-33749135)
chr8 (450-489)||(10268221-10268260)
chr8 (314-369)||(15143411-15143466)
chr8 (313-375)||(44527739-44527802)
chr8 (450-556)||(1321721-1321831)
chr8 (450-558)||(24285667-24285776)
chr8 (172-264)||(9184697-9184789)
chr8 (172-264)||(11721489-11721581)
chr8 (597-665)||(28848013-28848081)
chr8 (450-554)||(461755-461863)
chr8 (308-367)||(9186093-9186152)
chr8 (461-532)||(24527414-24527485)
chr8 (308-347)||(38884465-38884504)
chr8 (407-454)||(38884540-38884587)
chr8 (483-554)||(33159235-33159310)
chr8 (483-554)||(37525417-37525493)
chr8 (450-489)||(11031826-11031865)
chr8 (450-588)||(11790098-11790239)
chr8 (450-489)||(12515497-12515536)
chr8 (329-381)||(9186056-9186109)
chr8 (329-370)||(10269019-10269060)
[»] chr5 (26 HSPs)
chr5 (308-454)||(24497500-24497644)
chr5 (307-408)||(32089009-32089110)
chr5 (450-565)||(32836549-32836668)
chr5 (307-407)||(35399794-35399893)
chr5 (310-381)||(18727505-18727576)
chr5 (450-586)||(1344098-1344236)
chr5 (450-552)||(27076819-27076922)
chr5 (450-589)||(40329776-40329919)
chr5 (450-552)||(38177306-38177412)
chr5 (450-552)||(38204530-38204636)
chr5 (198-273)||(6114934-6115009)
chr5 (463-557)||(28036522-28036617)
chr5 (470-565)||(1343877-1343974)
chr5 (184-273)||(13452214-13452303)
chr5 (461-555)||(43317463-43317561)
chr5 (329-381)||(24497463-24497516)
chr5 (316-363)||(19997964-19998012)
chr5 (496-571)||(27349837-27349915)
chr5 (450-559)||(32089218-32089331)
chr5 (450-559)||(33257062-33257175)
chr5 (452-486)||(25509794-25509828)
chr5 (313-366)||(27076496-27076550)
chr5 (314-363)||(27076603-27076653)
chr5 (407-453)||(27076709-27076755)
chr5 (459-553)||(42620142-42620238)
chr5 (482-559)||(35400036-35400117)
[»] chr3 (39 HSPs)
chr3 (461-589)||(2976454-2976586)
chr3 (450-565)||(23774951-23775070)
chr3 (449-557)||(32843581-32843689)
chr3 (307-439)||(18429504-18429643)
chr3 (450-558)||(1846900-1847012)
chr3 (307-381)||(33851773-33851847)
chr3 (450-565)||(48634671-48634790)
chr3 (308-381)||(2976740-2976813)
chr3 (450-563)||(30501629-30501743)
chr3 (450-589)||(26448413-26448553)
chr3 (450-558)||(23876363-23876472)
chr3 (307-439)||(45256249-45256391)
chr3 (324-381)||(24382528-24382585)
chr3 (308-381)||(31886347-31886419)
chr3 (313-381)||(5127008-5127076)
chr3 (482-555)||(33112577-33112654)
chr3 (209-264)||(26449021-26449076)
chr3 (450-524)||(45256098-45256172)
chr3 (450-559)||(45897727-45897839)
chr3 (308-381)||(5134258-5134331)
chr3 (309-381)||(1846682-1846754)
chr3 (450-571)||(35862567-35862689)
chr3 (313-366)||(35862852-35862906)
chr3 (594-631)||(20961662-20961699)
chr3 (450-558)||(22219106-22219215)
chr3 (450-552)||(24382295-24382401)
chr3 (316-381)||(41624927-41624992)
chr3 (322-367)||(54093741-54093786)
chr3 (450-555)||(31886089-31886198)
chr3 (452-571)||(49495191-49495313)
chr3 (407-454)||(7589619-7589666)
chr3 (308-347)||(7589702-7589741)
chr3 (407-454)||(17260477-17260524)
chr3 (313-363)||(22219382-22219433)
chr3 (450-524)||(18429353-18429427)
chr3 (308-366)||(32843827-32843885)
chr3 (198-264)||(54093023-54093089)
chr3 (591-631)||(23432687-23432727)
chr3 (459-556)||(41945227-41945326)
[»] chr2 (34 HSPs)
chr2 (449-550)||(40150849-40150951)
chr2 (307-436)||(91188-91323)
chr2 (307-381)||(36223-36296)
chr2 (172-273)||(20941036-20941137)
chr2 (449-545)||(40151991-40152087)
chr2 (399-454)||(363200-363255)
chr2 (450-565)||(37418065-37418184)
chr2 (452-592)||(20941607-20941748)
chr2 (450-559)||(35968-36081)
chr2 (142-273)||(361727-361859)
chr2 (313-375)||(32607643-32607706)
chr2 (461-565)||(42880122-42880230)
chr2 (308-381)||(25620255-25620327)
chr2 (450-559)||(90995-91108)
chr2 (313-369)||(860445-860501)
chr2 (450-558)||(26581688-26581797)
chr2 (322-369)||(62382-62429)
chr2 (450-532)||(25620467-25620549)
chr2 (450-558)||(161302-161411)
chr2 (450-556)||(42002882-42002992)
chr2 (459-556)||(11022390-11022489)
chr2 (459-556)||(28247312-28247411)
chr2 (459-556)||(38149154-38149253)
chr2 (450-489)||(363317-363356)
chr2 (209-264)||(4416687-4416742)
chr2 (594-629)||(30947854-30947889)
chr2 (190-264)||(11315072-11315146)
chr2 (336-374)||(15806574-15806612)
chr2 (190-264)||(40097875-40097949)
chr2 (313-454)||(40098843-40098982)
chr2 (326-375)||(4415631-4415680)
chr2 (512-586)||(11313466-11313542)
chr2 (313-366)||(40151101-40151154)
chr2 (496-571)||(7744577-7744655)
[»] chr6 (19 HSPs)
chr6 (594-665)||(32669175-32669246)
chr6 (387-454)||(31209954-31210021)
chr6 (449-557)||(17935363-17935471)
chr6 (308-408)||(4645666-4645773)
chr6 (591-646)||(12464629-12464684)
chr6 (311-370)||(31209916-31209975)
chr6 (147-262)||(31209151-31209267)
chr6 (202-273)||(4314590-4314661)
chr6 (308-381)||(29114230-29114303)
chr6 (594-654)||(13729962-13730022)
chr6 (482-532)||(30640068-30640118)
chr6 (459-556)||(17951418-17951517)
chr6 (308-375)||(25170704-25170769)
chr6 (459-556)||(35175238-35175337)
chr6 (450-489)||(31210084-31210123)
chr6 (598-631)||(28043675-28043708)
chr6 (598-631)||(28044532-28044565)
chr6 (329-381)||(31209876-31209929)
chr6 (221-273)||(17933662-17933714)
[»] scaffold0129 (1 HSPs)
scaffold0129 (316-375)||(5637-5696)
[»] scaffold0204 (1 HSPs)
scaffold0204 (323-369)||(28809-28855)
[»] scaffold0072 (1 HSPs)
scaffold0072 (594-631)||(19075-19112)
[»] scaffold0062 (1 HSPs)
scaffold0062 (594-631)||(1692-1729)


Alignment Details
Target: chr7 (Bit Score: 99; Significance: 2e-48; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 450 - 589
Target Start/End: Original strand, 11683490 - 11683631
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca--tcattcatcttcaacc 547  Q
    |||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||| ||||||  ||||||||||||||||    
T  11683490 atataatgtagggatcgatttgatagttagtcaaataattcagggactaatttgatgataatattattatagaaatgttacatttcattcatcttcaacc 11683589  T
Q  548 tcttttcattagaactttgcacactccaagaacaatacaata 589  Q
    ||||||||||| |||||| |||||||| ||||||||||||||    
T  11683590 tcttttcattataactttacacactcctagaacaatacaata 11683631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 308 - 454
Target Start/End: Original strand, 11683273 - 11683427
Alignment:
Q  308 tttaagacttatgccttgttaatgccccatagttgggttgtttttgcctatgtaatatttcagacttatgacttctaac--------ttttgcctatgta 399  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||| | |||||||||||||||||| ||||| ||||        |||| ||||||||    
T  11683273 tttaagatttatgacttgttaatgccccatagttgggttgtttttgcttgtgtaatatttcagacttaagacttataacttatgacttttttcctatgta 11683372  T
Q  400 atatttcaggatcaagttatgtcttctgacttttttactttgttctgcacatata 454  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  11683373 atattttaggatcaagttgtgtcttctgacttttttactttgttctgcacatata 11683427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 308 - 439
Target Start/End: Original strand, 38613883 - 38614014
Alignment:
Q  308 tttaagacttatgccttgttaatgccccatagttgggttgtttttgcctatgtaatatttcagacttatgacttctaacttttgcctatgtaatatttca 407  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||| | | ||||||||||||| |||||||||    
T  38613883 tttaagacttatgacttgttaatgccccatagttgggttgcttttgcctatgtaatttctcagacttatgacatatgacttttgcctatgaaatatttca 38613982  T
Q  408 ggatcaagttatgtcttctgacttttttactt 439  Q
    |  |||| || ||| |||||  ||||||||||    
T  38613983 gtttcaatttgtgtgttctggattttttactt 38614014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 308 - 434
Target Start/End: Complemental strand, 33038386 - 33038260
Alignment:
Q  308 tttaagacttatgccttgttaatgccccatagttgggttgtttttgcctatgtaatatttcagacttatgacttctaacttttgcctatgtaatatttca 407  Q
    |||||||||| || |||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||| | | |||||||||||||||||||||||    
T  33038386 tttaagacttgtgacttgttaatgccccatagttgggttggttttgcctatgtaatttctcagacttatgacatatgacttttgcctatgtaatatttca 33038287  T
Q  408 ggatcaagttatgtcttctgacttttt 434  Q
    |  |||| || ||| ||||| ||||||    
T  33038286 gtttcaatttttgtgttctggcttttt 33038260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 308 - 439
Target Start/End: Original strand, 2167892 - 2168030
Alignment:
Q  308 tttaagacttatgccttgttaatgccccatagttgggttgtttttgcctatgtaatatttcagacttatgactt-----cta--acttttgcctatgtaa 400  Q
    ||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||| | |||||||||||||||     |||  ||||||||||||||||    
T  2167892 tttaagacttatgacttgttaatgccccataattgggttgcttttgcctatgtaatttctcagacttatgacttatgacctatgacttttgcctatgtaa 2167991  T
Q  401 tatttcaggatcaagttatgtcttctgacttttttactt 439  Q
    ||||||||  |||| || ||| |||||||||||||||||    
T  2167992 tatttcagtttcaatttgtgtgttctgacttttttactt 2168030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 307 - 436
Target Start/End: Complemental strand, 46995678 - 46995542
Alignment:
Q  307 gtttaagacttatgccttgttaatgccccatagttgggttgtttttgcctatgtaatatttcagacttatgact-----tcta--acttttgcctatgta 399  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||     ||||  |||| ||||||||||    
T  46995678 gtttaagacttatgacttgttaatgccccatagttgggttgtttttgcctatgtaatatctcagacttacgacttatgatctatgacttatgcctatgta 46995579  T
Q  400 atatttcaggatcaagttatgtcttctgactttttta 436  Q
    |||||||||  |||| || ||| ||||| ||||||||    
T  46995578 atatttcagtttcaatttgtgtgttctgcctttttta 46995542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 307 - 439
Target Start/End: Complemental strand, 47340857 - 47340725
Alignment:
Q  307 gtttaagacttatgccttgttaatgccccatagttgggttgtttttgcctatgtaatatttcagacttatgacttctaacttttgcctatgtaatatttc 406  Q
    ||||||||||||||  ||||||||||||||||||| ||||| |||| |||||||||| | ||||||||||||| | | ||||||||||||||||||||||    
T  47340857 gtttaagacttatgatttgttaatgccccatagttaggttgcttttacctatgtaatttatcagacttatgacctatgacttttgcctatgtaatatttc 47340758  T
Q  407 aggatcaagttatgtcttctgacttttttactt 439  Q
    ||  |||| || ||| ||||| | |||||||||    
T  47340757 agtttcaatttgtgtgttctggcatttttactt 47340725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 142 - 264
Target Start/End: Original strand, 11683069 - 11683192
Alignment:
Q  142 acccctctcttatccatt-atttacatacttacatttcattcggacacgtcaaacaagtccatgactcttctcctttccactaaaaccttcaccatcatc 240  Q
    |||||||||||| ||||| |||||||| ||||||||| |||| ||||| ||||||||| |  ||| ||||||||||||| ||||||||||||||||| ||    
T  11683069 acccctctcttacccattcatttacatccttacattttattcagacacatcaaacaagactctgattcttctcctttccgctaaaaccttcaccatcttc 11683168  T
Q  241 ttctctccaaaatcatcatcatct 264  Q
     |||||||||||||| ||||||||    
T  11683169 atctctccaaaatcaccatcatct 11683192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 450 - 586
Target Start/End: Complemental strand, 34784821 - 34784683
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttacat--cattcatcttcaacc 547  Q
    |||||||| ||||||| |||||||||||||  |||||||||| |  ||||| ||||| ||| ||||||||| ||||| |||||  |||||||||||||||    
T  34784821 atataatggagggatcgatttgatagttagaaaaataattcaaggactaatatgatggtaaaattattacataaaggctacatttcattcatcttcaacc 34784722  T
Q  548 tcttttcattagaactttgcacactccaagaacaataca 586  Q
    ||||||||||| |||||| ||||| || |||||||||||    
T  34784721 tcttttcattacaactttacacacacctagaacaataca 34784683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 323 - 408
Target Start/End: Original strand, 23954432 - 23954517
Alignment:
Q  323 ttgttaatgccccatagttgggttgtttttgcctatgtaatatttcagacttatgacttctaacttttgcctatgtaatatttcag 408  Q
    ||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||| | | ||||||||||||||||||||||||    
T  23954432 ttgttaatgccccatagttgggttgcttttgcctatgtaatttctcagacttatgacctatgacttttgcctatgtaatatttcag 23954517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 307 - 439
Target Start/End: Complemental strand, 3691049 - 3690910
Alignment:
Q  307 gtttaagacttatgccttgttaatgccccatagttgggttgtttttgcctatgtaatatttcagacttatgactt-----cta--acttttgcctatgta 399  Q
    |||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||| | |||||||||||||||     |||  |||||||||||||||    
T  3691049 gtttaagacttatgacttgttaatgccccatagttaggttgcttttgcctatgtaatttctcagacttatgacttatgacctatgacttttgcctatgta 3690950  T
Q  400 atatttcaggatcaagttatgtcttctgacttttttactt 439  Q
    |||||||||  |||| || ||| ||||| | |||||||||    
T  3690949 atatttcagtttcaatttgtgtgttctggcgtttttactt 3690910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 450 - 571
Target Start/End: Original strand, 48705198 - 48705321
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca--tcattcatcttcaacc 547  Q
    |||||||||| |||||| |||||||||||| ||||||||||| |  ||||| ||||| ||| ||||||| ||||||| ||||  ||||||||||||||||    
T  48705198 atataatgtaaggatcagtttgatagttagacaaataattcatggactaatatgatggtaaaattattatagaaaggatacatttcattcatcttcaacc 48705297  T
Q  548 tcttttcattagaactttgcacac 571  Q
    | ||||||||| |||||| |||||    
T  48705298 tgttttcattacaactttacacac 48705321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 313 - 375
Target Start/End: Original strand, 31914645 - 31914707
Alignment:
Q  313 gacttatgccttgttaatgccccatagttgggttgtttttgcctatgtaatatttcagactta 375  Q
    |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  31914645 gacttatgacttgttaatgccccatagttgggttgcttttgcctatgtaatatttcaaactta 31914707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 450 - 556
Target Start/End: Original strand, 36756290 - 36756400
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca----tcattcatcttcaa 545  Q
    |||||| ||| | ||| |||||||||||||  ||||||||||||  |||||||||||| |||||||||||||||||||||||    | | ||||||||||    
T  36756290 atataacgtatgaatctatttgatagttagaaaaataattcagggactaatttgatgaaaatattattacagaaaggttacatttttgaatcatcttcaa 36756389  T
Q  546 cctcttttcat 556  Q
    |||||||||||    
T  36756390 cctcttttcat 36756400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 450 - 556
Target Start/End: Original strand, 36762087 - 36762197
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca----tcattcatcttcaa 545  Q
    |||||| ||| | ||| |||||||||||||  ||||||||||||  |||||||||||| |||||||||||||||||||||||    | | ||||||||||    
T  36762087 atataacgtatgaatctatttgatagttagaaaaataattcagggactaatttgatgaaaatattattacagaaaggttacatttttgaatcatcttcaa 36762186  T
Q  546 cctcttttcat 556  Q
    |||||||||||    
T  36762187 cctcttttcat 36762197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 314 - 369
Target Start/End: Original strand, 23965669 - 23965724
Alignment:
Q  314 acttatgccttgttaatgccccatagttgggttgtttttgcctatgtaatatttca 369  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||    
T  23965669 acttatgacttgttaatgccccatagttgggttgcttttgcctatgtaatatttca 23965724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 392 - 454
Target Start/End: Original strand, 19710572 - 19710634
Alignment:
Q  392 cctatgtaatatttcaggatcaagttatgtcttctgacttttttactttgttctgcacatata 454  Q
    |||||||||||||||| ||| |||| |||||||||||||||||||| ||||||||||||||||    
T  19710572 cctatgtaatatttcaagattaagtcatgtcttctgacttttttacgttgttctgcacatata 19710634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 450 - 556
Target Start/End: Complemental strand, 3690833 - 3690723
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca----tcattcatcttcaa 545  Q
    |||||| ||||||||| ||||||||| |||| |||||||||||   ||||| |||||  |||||||||||||||||||||||    | | ||||||||||    
T  3690833 atataacgtagggatctatttgatagatagtgaaataattcagagactaatatgatggaaatattattacagaaaggttacatttctgaatcatcttcaa 3690734  T
Q  546 cctcttttcat 556  Q
    |||||||||||    
T  3690733 cctcttttcat 3690723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 449 - 532
Target Start/End: Original strand, 12903713 - 12903795
Alignment:
Q  449 catataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttacat 532  Q
    ||||||||||| ||||| |||||||| |||||||||||||||| |  ||||||||||| ||||||||| |||| ||||||||||    
T  12903713 catataatgtaaggatcgatttgatatttagtcaaataattcatggactaatttgatggtaatattatgacag-aaggttacat 12903795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 497 - 565
Target Start/End: Original strand, 23954649 - 23954721
Alignment:
Q  497 taatttgatgataatattattacagaaaggttacat----cattcatcttcaacctcttttcattagaacttt 565  Q
    |||||||||| ||||||||||||||||| |||||||    || ||||||||||||||||||||||||||||||    
T  23954649 taatttgatggtaatattattacagaaatgttacattcctcaatcatcttcaacctcttttcattagaacttt 23954721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 450 - 556
Target Start/End: Complemental strand, 47340648 - 47340538
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca----tcattcatcttcaa 545  Q
    |||||| ||| ||||| ||||||||| |||| ||||||||||||  ||||| |||||| |||||||||||||||| | ||||    | | ||||||||||    
T  47340648 atataacgtatggatctatttgatagatagtgaaataattcagggactaatatgatgaaaatattattacagaaaagatacatttctgaatcatcttcaa 47340549  T
Q  546 cctcttttcat 556  Q
    |||||||||||    
T  47340548 cctcttttcat 47340538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 313 - 381
Target Start/End: Original strand, 6058038 - 6058106
Alignment:
Q  313 gacttatgccttgttaatgccccatagttgggttgtttttgcctatgtaatatttcagacttatgactt 381  Q
    ||||||||  ||||||||||||  ||||| ||||||||||||||||||||||||||| ||||| |||||    
T  6058038 gacttatgatttgttaatgccctgtagtttggttgtttttgcctatgtaatatttcaaacttaagactt 6058106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 313 - 381
Target Start/End: Complemental strand, 25972210 - 25972142
Alignment:
Q  313 gacttatgccttgttaatgccccatagttgggttgtttttgcctatgtaatatttcagacttatgactt 381  Q
    |||||||| |||||||||||||| ||||| ||||| |||| |||||||||||||||| ||||| |||||    
T  25972210 gacttatgacttgttaatgccccgtagtttggttgcttttccctatgtaatatttcaaacttaagactt 25972142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 313 - 381
Target Start/End: Complemental strand, 46866994 - 46866926
Alignment:
Q  313 gacttatgccttgttaatgccccatagttgggttgtttttgcctatgtaatatttcagacttatgactt 381  Q
    |||||||| |||||||||||| | ||||| ||||| ||||||||||||||||||||| ||||| |||||    
T  46866994 gacttatgacttgttaatgccacgtagtttggttgcttttgcctatgtaatatttcaaacttaagactt 46866926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 450 - 559
Target Start/End: Complemental strand, 46995461 - 46995348
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca----tcattcatcttcaa 545  Q
    |||||| ||||||||| ||||||||| |||  ||||||||||||  |||||||||||  | |||||||| |||||| |||||    ||| ||||||||||    
T  46995461 atataacgtagggatctatttgatagatagaaaaataattcagggactaatttgatggcagtattattatagaaagattacatttctcaatcatcttcaa 46995362  T
Q  546 cctcttttcattag 559  Q
    |||||||| |||||    
T  46995361 cctcttttgattag 46995348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 461 - 581
Target Start/End: Original strand, 38614103 - 38614227
Alignment:
Q  461 ggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttacatc----attcatcttcaacctcttttcat 556  Q
    ||||| ||||||||| ||   |||||||||| |  ||||||||||   ||||||||||||||||||||||||     | ||||||||||||| |||||||    
T  38614103 ggatctatttgatagatatataaataattcatggactaatttgatagaaatattattacagaaaggttacatttctgaatcatcttcaacctattttcat 38614202  T
Q  557 tagaactttgcacactccaagaaca 581  Q
    ||||||||| ||||| || ||||||    
T  38614203 tagaactttacacacacctagaaca 38614227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 450 - 581
Target Start/End: Original strand, 2168108 - 2168243
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttac----atcattcatcttcaa 545  Q
    |||||| ||| ||||| ||||| ||| |||  ||||||||||||  |||||||||| | |||||||||||| |||||||||    || | | ||||||||    
T  2168108 atataacgtatggatctatttggtagatagagaaataattcagggactaatttgataaaaatattattacacaaaggttacattaatgaattatcttcaa 2168207  T
Q  546 cctcttttcattagaactttgcacactccaagaaca 581  Q
    ||| ||||||| |||||||| ||||| || ||||||    
T  2168208 ccttttttcataagaactttacacacacctagaaca 2168243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 597 - 665
Target Start/End: Complemental strand, 10259759 - 10259691
Alignment:
Q  597 agatgtttccttaaatgttgcagcaacattcttaaagaacacgctaagtacaagccgcatatctctgct 665  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||||||| || |||  ||||||||||    
T  10259759 agatgtttccttaaatgttgcaacaacattcttcagaaacacgctaagtataaaccgtctatctctgct 10259691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 450 - 554
Target Start/End: Complemental strand, 33038178 - 33038070
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca----tcattcatcttcaa 545  Q
    |||||| ||| | ||| ||||||||| |||   |||||||||||  |||||||||||| |||||||| ||||||||| ||||    ||| ||||||||||    
T  33038178 atataacgtatgtatctatttgatagatagaacaataattcagggactaatttgatgaaaatattatgacagaaaggatacattcctcaatcatcttcaa 33038079  T
Q  546 cctcttttc 554  Q
    |||||||||    
T  33038078 cctcttttc 33038070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 308 - 439
Target Start/End: Original strand, 36756074 - 36756212
Alignment:
Q  308 tttaagacttatgccttgttaatgccccatagttgggttgtttttgcctatgtaatatttcagacttatgactt-----cta--acttttgcctatgtaa 400  Q
    ||||||||| ||| ||| |||||| | ||||||||||||  |||||| |||||||| | | |||||||||||||     |||  ||||||||||| ||||    
T  36756074 tttaagactcatgacttattaatgtctcatagttgggtttcttttgcatatgtaatgtctgagacttatgacttatgacctatgacttttgcctacgtaa 36756173  T
Q  401 tatttcaggatcaagttatgtcttctgacttttttactt 439  Q
    |||||||   |||| || ||| |||||||||||||||||    
T  36756174 tatttcattttcaatttgtgtgttctgacttttttactt 36756212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 308 - 439
Target Start/End: Original strand, 36761871 - 36762009
Alignment:
Q  308 tttaagacttatgccttgttaatgccccatagttgggttgtttttgcctatgtaatatttcagacttatgactt-----cta--acttttgcctatgtaa 400  Q
    ||||||||| ||| ||| |||||| | ||||||||||||  |||||| |||||||| | | |||||||||||||     |||  ||||||||||| ||||    
T  36761871 tttaagactcatgacttattaatgtctcatagttgggtttcttttgcatatgtaatgtctgagacttatgacttatgacctatgacttttgcctacgtaa 36761970  T
Q  401 tatttcaggatcaagttatgtcttctgacttttttactt 439  Q
    |||||||   |||| || ||| |||||||||||||||||    
T  36761971 tatttcattttcaatttgtgtgttctgacttttttactt 36762009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 450 - 571
Target Start/End: Original strand, 7402784 - 7402906
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca-tcattcatcttcaacct 548  Q
    |||||| ||||| |||||||||||  |||| ||||||||| | |  |||||||||||| ||||||   | ||||| ||| || | |||||||||||||||    
T  7402784 atataacgtaggaatcaatttgattcttaggcaaataatttaaggactaatttgatgaaaatatttcgatagaaaagttgcattaattcatcttcaacct 7402883  T
Q  549 cttttcattagaactttgcacac 571  Q
    |||||||||| ||| || |||||    
T  7402884 cttttcattacaacattacacac 7402906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 459 - 556
Target Start/End: Original strand, 45464320 - 45464419
Alignment:
Q  459 agggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca--tcattcatcttcaacctcttttcat 556  Q
    ||||||| |||||||||| |  |||||||||||||  ||||| ||||| ||| ||||| ||||| | |  |||  |||||||||||||||||||||||||    
T  45464320 agggatcgatttgatagtaacacaaataattcagggactaatctgatggtaaaattataacagatatgcaacatttcattcatcttcaacctcttttcat 45464419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 459 - 556
Target Start/End: Complemental strand, 48303124 - 48303025
Alignment:
Q  459 agggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca--tcattcatcttcaacctcttttcat 556  Q
    ||||||| |||||||||| |  |||||||||||||  ||||| ||||| ||| ||||| ||||| | |  |||  |||||||||||||||||||||||||    
T  48303124 agggatcgatttgatagtaacacaaataattcagggactaatctgatggtaaaattataacagatacgcaacatttcattcatcttcaacctcttttcat 48303025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 190 - 250
Target Start/End: Original strand, 48455266 - 48455326
Alignment:
Q  190 tcaaacaagtccatgactcttctcctttccactaaaaccttcaccatcatcttctctccaa 250  Q
    |||||||||||| |||||| ||||||| || ||||||| ||||||||| || |||||||||    
T  48455266 tcaaacaagtccctgactcatctccttcccgctaaaactttcaccatcttcatctctccaa 48455326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 263
Target Start/End: Original strand, 1546619 - 1546686
Alignment:
Q  196 aagtccatgactcttctcctttccactaaaaccttcaccatcatcttctctccaaaatcatcatcatc 263  Q
    |||||| ||||  ||||||||||| |||||| ||||| || | ||| |||||||||||||||||||||    
T  1546619 aagtccctgacatttctcctttccgctaaaatcttcatcaccttctcctctccaaaatcatcatcatc 1546686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 264
Target Start/End: Original strand, 48704528 - 48704571
Alignment:
Q  221 ctaaaaccttcaccatcatcttctctccaaaatcatcatcatct 264  Q
    ||||||||||||||||| ||  ||||||||||||||||||||||    
T  48704528 ctaaaaccttcaccatcttcgcctctccaaaatcatcatcatct 48704571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 264
Target Start/End: Complemental strand, 8423065 - 8423004
Alignment:
Q  203 tgactcttctcctttccactaaaaccttcaccatcatcttctctccaaaatcatcatcatct 264  Q
    |||||||||||||| || ||||||| ||| ||||  || || ||||||||||||||||||||    
T  8423065 tgactcttctccttcccgctaaaacgttctccattgtcatccctccaaaatcatcatcatct 8423004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 536 - 565
Target Start/End: Original strand, 27956723 - 27956752
Alignment:
Q  536 tcatcttcaacctcttttcattagaacttt 565  Q
    ||||||||||||||||||||||||||||||    
T  27956723 tcatcttcaacctcttttcattagaacttt 27956752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 381
Target Start/End: Original strand, 48457063 - 48457112
Alignment:
Q  333 cccatagttgggttg-tttttgcctatgtaatatttcagacttatgactt 381  Q
    ||||||||||||||  ||||| |||||||||||||| |||||||||||||    
T  48457063 cccatagttgggtttctttttacctatgtaatatttaagacttatgactt 48457112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 461 - 489
Target Start/End: Original strand, 19711980 - 19712008
Alignment:
Q  461 ggatcaatttgatagttagtcaaataatt 489  Q
    |||||||||||||||||||||||||||||    
T  19711980 ggatcaatttgatagttagtcaaataatt 19712008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 459 - 556
Target Start/End: Complemental strand, 30109548 - 30109449
Alignment:
Q  459 agggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca--tcattcatcttcaacctcttttcat 556  Q
    ||||||| ||||||| || |  |||||||||||||  ||||| ||||| ||| ||||| ||||| | |  |||  |||||||||||||||||||||||||    
T  30109548 agggatcgatttgatggtaacacaaataattcagggactaatctgatggtaaaattataacagatatgcaacatttcattcatcttcaacctcttttcat 30109449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 483 - 554
Target Start/End: Original strand, 40785004 - 40785080
Alignment:
Q  483 aataattcaggatctaatttgatgataatattattacagaaaggttaca-----tcattcatcttcaacctcttttc 554  Q
    ||||| |||||  |||||||||||  |||||||||| ||||||||||||     ||| |||||||||||||||||||    
T  40785004 aataactcagggactaatttgatggaaatattattatagaaaggttacaattcctcaatcatcttcaacctcttttc 40785080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 308 - 380
Target Start/End: Complemental strand, 46811601 - 46811529
Alignment:
Q  308 tttaagacttatgccttgttaatgccccatagttgggttgtttttgcctatgtaatatttcagacttatgact 380  Q
    ||||||||| ||| |||||||||| | ||||||||| ||  |||||| |||||||| |  |||||||||||||    
T  46811601 tttaagactcatgacttgttaatgtctcatagttggatttcttttgcatatgtaatgtcccagacttatgact 46811529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 90; Significance: 4e-43; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 310 - 454
Target Start/End: Original strand, 39294301 - 39294452
Alignment:
Q  310 taagacttatgccttgttaatgccccatagttgggttgtttttgcctatgtaatatttc-------agacttatgacttctaacttttgcctatgtaata 402  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||| | ||||||||||||||||||    
T  39294301 taagacttatgacttgttaatgccccatagttgggttgtttttgcctatgtaatatttcagacttaagacttatgacttatgacttttgcctatgtaata 39294400  T
Q  403 tttcaggatcaagttatgtcttctgacttttttactttgttctgcacatata 454  Q
    ||| ||||||||||| ||||||||||| |||||||  |||| ||||||||||    
T  39294401 ttttaggatcaagttgtgtcttctgacatttttacaatgttatgcacatata 39294452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 308 - 454
Target Start/End: Complemental strand, 231112 - 230969
Alignment:
Q  308 tttaagacttatgccttgttaatgccccatagttgggttgtttttgcctatgtaatatttcagacttatgacttctaacttttgcctatgtaatatttca 407  Q
    |||||||||| || ||||||||||||||||| ||| |||  ||||||||||   |||||||||||||  ||||| | ||||||||||||||||||||| |    
T  231112 tttaagacttgtgacttgttaatgccccataattgagttacttttgcctat---atatttcagacttgagacttatgacttttgcctatgtaatatttaa 231016  T
Q  408 ggatcaagttatgtcttctgacttttttactttgttctgcacatata 454  Q
    |||||||||| |||||||||| |||||||  ||||| ||||||||||    
T  231015 ggatcaagttgtgtcttctgaattttttatattgttttgcacatata 230969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 449 - 557
Target Start/End: Original strand, 10543995 - 10544104
Alignment:
Q  449 catataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca-tcattcatcttcaacc 547  Q
    ||||||||||| ||||||||||||||||||||||||||||||| ||  || |||| || ||||||||| |||||||| ||| | ||||||||||||||||    
T  10543995 catataatgtaaggatcaatttgatagttagtcaaataattcatgaattagtttgctggtaatattatgacagaaagattatattcattcatcttcaacc 10544094  T
Q  548 tcttttcatt 557  Q
    ||||||||||    
T  10544095 tcttttcatt 10544104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 308 - 434
Target Start/End: Complemental strand, 51041629 - 51041503
Alignment:
Q  308 tttaagacttatgccttgttaatgccccatagttgggttgtttttgcctatgtaatatttcagacttatgacttctaacttttgcctatgtaatatttca 407  Q
    |||||||||| || ||||||||||  ||||||||||||||||||| |||||||||| | | ||||||||||| | | |||||||||||| ||||||||||    
T  51041629 tttaagacttgtgacttgttaatgttccatagttgggttgttttttcctatgtaatttcttagacttatgacatatgacttttgcctatataatatttca 51041530  T
Q  408 ggatcaagttatgtcttctgacttttt 434  Q
    |  |||| || ||| ||||| ||||||    
T  51041529 gtttcaatttttgtgttctggcttttt 51041503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 450 - 572
Target Start/End: Original strand, 25994538 - 25994662
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca--tcattcatcttcaacc 547  Q
    |||||||||| ||||||||||||| ||||| |||||||||||||   |||| ||||||||| |||||||||||||   ||||  | ||| |||||||| |    
T  25994538 atataatgtatggatcaatttgattgttagacaaataattcagggattaatatgatgataaaattattacagaaatactacatttaatttatcttcaagc 25994637  T
Q  548 tcttttcattagaactttgcacact 572  Q
    ||||||||||| |||| | ||||||    
T  25994638 tcttttcattacaactctacacact 25994662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 308 - 407
Target Start/End: Complemental strand, 44557495 - 44557396
Alignment:
Q  308 tttaagacttatgccttgttaatgccccatagttgggttgtttttgcctatgtaatatttcagacttatgacttctaacttttgcctatgtaatatttca 407  Q
    ||||||||| ||| |||||||||| | ||||||||||||  |||||| |||||||| | ||||||||||||| | | ||||||| ||| |||||||||||    
T  44557495 tttaagactcatgacttgttaatgtctcatagttgggtttcttttgcatatgtaatgtctcagacttatgacctatgacttttgtctaagtaatatttca 44557396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 314 - 375
Target Start/End: Original strand, 27383316 - 27383377
Alignment:
Q  314 acttatgccttgttaatgccccatagttgggttgtttttgcctatgtaatatttcagactta 375  Q
    ||||||| |||||||||||||||||||| ||||| ||||| ||||||||||||||| |||||    
T  27383316 acttatgacttgttaatgccccatagtttggttgcttttgtctatgtaatatttcaaactta 27383377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 313 - 374
Target Start/End: Original strand, 50132666 - 50132727
Alignment:
Q  313 gacttatgccttgttaatgccccatagttgggttgtttttgcctatgtaatatttcagactt 374  Q
    |||||||| |||||||||||||||||||| ||||| |||| |||||||||||||||| ||||    
T  50132666 gacttatgacttgttaatgccccatagtttggttgctttttcctatgtaatatttcaaactt 50132727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 307 - 407
Target Start/End: Complemental strand, 2349580 - 2349473
Alignment:
Q  307 gtttaagacttatgccttgttaatgccccatagttgggttgtttttgcctatgtaatatttcagacttatgactt-----cta--acttttgcctatgta 399  Q
    |||||||||||||  ||||||||||||| | | |||||||| |||||| |||||||| | |||||||||||||||     |||  |||||||||||||||    
T  2349580 gtttaagacttattacttgttaatgccctaaaattgggttgcttttgcttatgtaatttctcagacttatgacttattacctatgacttttgcctatgta 2349481  T
Q  400 atatttca 407  Q
    ||||||||    
T  2349480 atatttca 2349473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 455 - 558
Target Start/End: Original strand, 4614408 - 4614512
Alignment:
Q  455 atgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttacat-cattcatcttcaacctctttt 553  Q
    ||||||||||  |||||||||||| |||||||| |  ||  ||||||||||| |||||||||  |||||| ||| ||| ||||||| |||||||||||||    
T  4614408 atgtagggattgatttgatagttactcaaataaatatgggactaatttgatggtaatattatggcagaaatgttgcattcattcattttcaacctctttt 4614507  T
Q  554 catta 558  Q
    |||||    
T  4614508 catta 4614512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 307 - 381
Target Start/End: Original strand, 35997031 - 35997104
Alignment:
Q  307 gtttaagacttatgccttgttaatgccccatagttgggttgtttttgcctatgtaatatttcagacttatgactt 381  Q
    |||||||||||||| ||||||||||||||| | |||||||| |||||| |||||||| | || ||||||||||||    
T  35997031 gtttaagacttatgacttgttaatgcccca-aattgggttgcttttgcttatgtaatttctctgacttatgactt 35997104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 308 - 381
Target Start/End: Complemental strand, 10371690 - 10371617
Alignment:
Q  308 tttaagacttatgccttgttaatgccccatagttgggttgtttttgcctatgtaatatttcagacttatgactt 381  Q
    |||||| |||||| ||||||||||||||| | |||||||| |||||| |||||||| | ||||| |||||||||    
T  10371690 tttaagtcttatgacttgttaatgccccaaaattgggttgcttttgcttatgtaatttctcagaattatgactt 10371617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 308 - 381
Target Start/End: Original strand, 10767406 - 10767479
Alignment:
Q  308 tttaagacttatgccttgttaatgccccatagttgggttgtttttgcctatgtaatatttcagacttatgactt 381  Q
    |||||| |||||| ||||||||||||||| | |||||||| |||||| |||||||| | ||||| |||||||||    
T  10767406 tttaagtcttatgacttgttaatgccccaaaattgggttgcttttgcttatgtaatttctcagaattatgactt 10767479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 335 - 454
Target Start/End: Complemental strand, 9590801 - 9590683
Alignment:
Q  335 catagttgggttgtttttgcctatgtaatatttcagacttatgacttctaactt--ttgcctatgtaatatttcaggatcaagttatgtcttctgacttt 432  Q
    ||||||||||||| |||||| |||| ||||||||||||||| ||||| | ||||  |||   |||  || ||  ||||| |||||  || ||||||||||    
T  9590801 catagttgggttgcttttgcttatgcaatatttcagacttaagacttatgacttatttg---atggtattttcaaggatgaagttgcgttttctgacttt 9590705  T
Q  433 tttactttgttctgcacatata 454  Q
    ||||||||||||||||||||||    
T  9590704 tttactttgttctgcacatata 9590683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 313 - 381
Target Start/End: Original strand, 44973670 - 44973738
Alignment:
Q  313 gacttatgccttgttaatgccccatagttgggttgtttttgcctatgtaatatttcagacttatgactt 381  Q
    |||||||| |||||||||||| |  |||| ||||| ||||||||||||||||||||| ||||| |||||    
T  44973670 gacttatgacttgttaatgccgcggagtttggttgattttgcctatgtaatatttcaaacttaagactt 44973738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 459 - 555
Target Start/End: Complemental strand, 42880238 - 42880140
Alignment:
Q  459 agggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca--tcattcatcttcaacctcttttca 555  Q
    ||||||| |||||||||| |  |||||||||||||  ||||||||||| ||| ||||| ||||| | |  |||  ||||||||||||||||||||||||    
T  42880238 agggatcgatttgatagtaacacaaataattcagggactaatttgatggtaaaattataacagatatgcaacatttcattcatcttcaacctcttttca 42880140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 450 - 532
Target Start/End: Original strand, 2828064 - 2828146
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttacat 532  Q
    |||||| ||||||||| ||||||||| |||  ||||||||||||   ||||||||||  |||||||||| |||||| ||||||    
T  2828064 atataacgtagggatctatttgatagatagataaataattcagggattaatttgatggcaatattattatagaaagattacat 2828146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 450 - 532
Target Start/End: Original strand, 27626137 - 27626219
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttacat 532  Q
    |||||| ||| | ||| ||||||||| |||  |||||||||||   |||||||||||  ||||||||||||||||||||||||    
T  27626137 atataacgtatgaatctatttgatagatagaaaaataattcagagactaatttgatggaaatattattacagaaaggttacat 27626219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 459 - 556
Target Start/End: Original strand, 39084289 - 39084388
Alignment:
Q  459 agggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca--tcattcatcttcaacctcttttcat 556  Q
    ||||||| |||||||||| |  |||||||||||||  ||||| ||||| ||| ||||| ||||| | |  |||  |||||||||||||||||||||||||    
T  39084289 agggatcgatttgatagtaacacaaataattcagggactaatctgatggtaaaattataacagatatgcaacatttcattcatcttcaacctcttttcat 39084388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 450 - 486
Target Start/End: Original strand, 39294515 - 39294551
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaata 486  Q
    ||||||||||||||||||||||||||||| |||||||    
T  39294515 atataatgtagggatcaatttgatagttattcaaata 39294551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 459 - 556
Target Start/End: Complemental strand, 43779342 - 43779243
Alignment:
Q  459 agggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca--tcattcatcttcaacctcttttcat 556  Q
    ||||||| |||||||||| |  |||||||||||||  ||||| ||||| ||| ||||| ||||| | |  |||  |||||||||||||||||||||||||    
T  43779342 agggatcgatttgatagtaacacaaataattcagggactaatctgatggtaaaattataacagatatgcaacatttcattcatcttcaacctcttttcat 43779243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 450 - 489
Target Start/End: Complemental strand, 13438312 - 13438273
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaataatt 489  Q
    |||||||||| ||||| |||||||||||||||||||||||    
T  13438312 atataatgtaaggatcgatttgatagttagtcaaataatt 13438273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 264
Target Start/End: Original strand, 25993847 - 25993902
Alignment:
Q  209 ttctcctttccactaaaaccttcaccatcatcttctctccaaaatcatcatcatct 264  Q
    |||||||| || | ||||||||||||||| ||  ||||||||||||||||||||||    
T  25993847 ttctccttcccgccaaaaccttcaccatcttcacctctccaaaatcatcatcatct 25993902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 450 - 558
Target Start/End: Original strand, 7150307 - 7150416
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaataa-ttcaggatctaatttgatgataatattattacagaaaggttaca-tcattcatcttcaacc 547  Q
    |||||||||||||||| | |||||| |||  ||||||| || ||||| ||||||||||  ||||||   ||||||||||| || ||||||||||||||||    
T  7150307 atataatgtagggatcgacttgatacttaagcaaataatttaaggat-taatttgatggaaatatttcgacagaaaggttgcattcattcatcttcaacc 7150405  T
Q  548 tcttttcatta 558  Q
      |||||||||    
T  7150406 cattttcatta 7150416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 381
Target Start/End: Complemental strand, 231149 - 231096
Alignment:
Q  329 atgccccatagttgggttg-tttttgcctatgtaatatttcagacttatgactt 381  Q
    |||||| |||||||||||  |||||||||||||||||||| |||||| ||||||    
T  231149 atgccctatagttgggtttctttttgcctatgtaatatttaagacttgtgactt 231096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 536 - 581
Target Start/End: Original strand, 4519814 - 4519859
Alignment:
Q  536 tcatcttcaacctcttttcattagaactttgcacactccaagaaca 581  Q
    |||||||||||||||||||||||||| ||| ||||| || ||||||    
T  4519814 tcatcttcaacctcttttcattagaattttacacacacctagaaca 4519859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 556
Target Start/End: Original strand, 5485191 - 5485287
Alignment:
Q  462 gatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca--tcattcatcttcaacctcttttcat 556  Q
    |||| |||||||||| |  |||||||||||||  ||||| ||||| ||| ||||| ||||| | |  |||  |||||||||||||||||||||||||    
T  5485191 gatcgatttgatagtaacacaaataattcagggactaatctgatggtaaaattataacagatatgcaacatttcattcatcttcaacctcttttcat 5485287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 598 - 631
Target Start/End: Original strand, 13269375 - 13269408
Alignment:
Q  598 gatgtttccttaaatgttgcagcaacattcttaa 631  Q
    ||||||||||||||||||||| ||||||||||||    
T  13269375 gatgtttccttaaatgttgcaacaacattcttaa 13269408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 598 - 631
Target Start/End: Original strand, 13959499 - 13959532
Alignment:
Q  598 gatgtttccttaaatgttgcagcaacattcttaa 631  Q
    ||||||||||||||||||||| ||||||||||||    
T  13959499 gatgtttccttaaatgttgcaacaacattcttaa 13959532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 459 - 556
Target Start/End: Original strand, 39189955 - 39190054
Alignment:
Q  459 agggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca--tcattcatcttcaacctcttttcat 556  Q
    ||||||| ||||||| || |  |||||||||||||  ||||| ||||| ||| ||||| ||||| | |  |||  |||||||||||||||||||||||||    
T  39189955 agggatcgatttgatggtaacacaaataattcagggactaatctgatggtaaaattataacagatatgcaacatttcattcatcttcaacctcttttcat 39190054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 459 - 556
Target Start/End: Original strand, 39922143 - 39922242
Alignment:
Q  459 agggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca--tcattcatcttcaacctcttttcat 556  Q
    ||||||| |||||||||| |  |||||||||||||  ||||| | ||| ||| ||||| ||||| | |  |||  |||||||||||||||||||||||||    
T  39922143 agggatcgatttgatagtaacacaaataattcagggactaatctaatggtaaaattataacagatatgcaacatttcattcatcttcaacctcttttcat 39922242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 450 - 518
Target Start/End: Complemental strand, 44557286 - 44557218
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattatta 518  Q
    |||||||||| | ||| ||||||||| |||  ||||||||||||  |||||||||||  ||||||||||    
T  44557286 atataatgtatgaatctatttgatagatagaaaaataattcagggactaatttgatggaaatattatta 44557218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 459 - 556
Target Start/End: Complemental strand, 44993763 - 44993664
Alignment:
Q  459 agggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca--tcattcatcttcaacctcttttcat 556  Q
    ||||||| |||||||||| |  ||||||||||| |  ||||| ||||| ||| ||||| ||||| | |  |||  |||||||||||||||||||||||||    
T  44993763 agggatcgatttgatagtaacacaaataattcatggactaatctgatggtaaaattataacagatatgcaacatttcattcatcttcaacctcttttcat 44993664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 2e-35; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 307 - 439
Target Start/End: Complemental strand, 45379975 - 45379843
Alignment:
Q  307 gtttaagacttatgccttgttaatgccccatagttgggttgtttttgcctatgtaatatttcagacttatgacttctaacttttgcctatgtaatatttc 406  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| | ||||||||||||| | | ||||||||||||||||||||||    
T  45379975 gtttaagacttatgacttgttaatgccccatagttaggttgtttttgcctatgtaatttctcagacttatgacctatgacttttgcctatgtaatatttc 45379876  T
Q  407 aggatcaagttatgtcttctgacttttttactt 439  Q
    ||  |||| || ||| ||||| | |||||||||    
T  45379875 agtttcaatttgtgtgttctggcgtttttactt 45379843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 449 - 586
Target Start/End: Complemental strand, 42559102 - 42558964
Alignment:
Q  449 catataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca-tcattcatcttcaacc 547  Q
    ||||||||||||||||| |||||||| ||| |||||||||||| |  || |||||||| ||||||||| ||| |||||||||| ||||||||||||||||    
T  42559102 catataatgtagggatcgatttgatacttaatcaaataattcatggacttatttgatggtaatattatgacaaaaaggttacattcattcatcttcaacc 42559003  T
Q  548 tcttttcattagaactttgcacactccaagaacaataca 586  Q
    ||||||||||||||| || ||||| || || ||||||||    
T  42559002 tcttttcattagaacattacacacacctagtacaataca 42558964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 307 - 436
Target Start/End: Original strand, 31802781 - 31802910
Alignment:
Q  307 gtttaagacttatgccttgttaatgccccatagttgggttgtttttgcctatgtaatatttcagacttatgacttctaacttttgcctatgtaatatttc 406  Q
    |||||||||||||| ||| |||||||||||||||||||||| |||| |||||||||||| ||||||||||||| | | |||| ||||||| |||||||||    
T  31802781 gtttaagacttatgacttattaatgccccatagttgggttgcttttccctatgtaatatctcagacttatgacctatgacttatgcctatataatatttc 31802880  T
Q  407 aggatcaagttatgtcttctgactttttta 436  Q
    |   |||| || ||| ||||| ||||||||    
T  31802881 aatttcaatttgtgtgttctgcctttttta 31802910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 307 - 381
Target Start/End: Complemental strand, 46637781 - 46637707
Alignment:
Q  307 gtttaagacttatgccttgttaatgccccatagttgggttgtttttgcctatgtaatatttcagacttatgactt 381  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||    
T  46637781 gtttaagacttatgacttgttaatgccccatagttgggttgcttttgcctatgtaatatctcaaacttatgactt 46637707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 307 - 439
Target Start/End: Original strand, 44158483 - 44158622
Alignment:
Q  307 gtttaagacttatgccttgttaatgccccatagttgggttgtttttgcctatgtaatatttcagacttatgactt-----cta--acttttgcctatgta 399  Q
    |||||||||||||| |||||||||||| ||||||| ||||| ||||||||||||||| | |||||||||||||||     |||  |||||||||||||||    
T  44158483 gtttaagacttatgacttgttaatgcctcatagttaggttgcttttgcctatgtaatttctcagacttatgacttatgacctatgacttttgcctatgta 44158582  T
Q  400 atatttcaggatcaagttatgtcttctgacttttttactt 439  Q
    |||||||||  |||| || ||| ||||| | |||||||||    
T  44158583 atatttcagtttcaatttgtgtgttctggcgtttttactt 44158622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 308 - 439
Target Start/End: Complemental strand, 33680138 - 33680000
Alignment:
Q  308 tttaagacttatgccttgttaatgccccatagttgggttgtttttgcctatgtaatatttcagacttatgacttcta-------acttttgcctatgtaa 400  Q
    ||||||||| ||| |||||||||||||||||||| ||||  |||||| |||||||| | ||||||||||||||| ||       ||||||||||||||||    
T  33680138 tttaagactcatgacttgttaatgccccatagttcggtttcttttgcatatgtaatgtctcagacttatgacttataacctatgacttttgcctatgtaa 33680039  T
Q  401 tatttcaggatcaagttatgtcttctgacttttttactt 439  Q
    ||||||||  |||| || ||| ||||| |||||||||||    
T  33680038 tatttcagtttcaatttgtgtgttctggcttttttactt 33680000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 307 - 439
Target Start/End: Original strand, 42135437 - 42135576
Alignment:
Q  307 gtttaagacttatgccttgttaatgccccatagttgggttgtttttgcctatgtaatatttcagacttatgactt-----cta--acttttgcctatgta 399  Q
    |||||||||||||| ||||||||| || ||||||| ||||||||||||||||||||| | |||||||||||||||     |||  ||||||| |||||||    
T  42135437 gtttaagacttatgacttgttaatacctcatagttaggttgtttttgcctatgtaatttctcagacttatgacttatgacctatgacttttgtctatgta 42135536  T
Q  400 atatttcaggatcaagttatgtcttctgacttttttactt 439  Q
    |||||||||  |||| || ||| || |||| |||||||||    
T  42135537 atatttcagtttcaatttgtgtgttatgacgtttttactt 42135576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 450 - 559
Target Start/End: Complemental strand, 46637565 - 46637452
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca----tcattcatcttcaa 545  Q
    |||||| ||||||||| ||||||||| |||  ||||||||||||  |||||||||||  |||||||||| |||||| |||||    ||| ||||||||||    
T  46637565 atataacgtagggatctatttgatagatagagaaataattcagggactaatttgatggcaatattattatagaaagattacatttctcaatcatcttcaa 46637466  T
Q  546 cctcttttcattag 559  Q
    |||||||| |||||    
T  46637465 cctcttttgattag 46637452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 452 - 555
Target Start/End: Complemental strand, 18183448 - 18183341
Alignment:
Q  452 ataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca----tcattcatcttcaacc 547  Q
    |||| ||| ||||| ||||||||  |||  ||||||||||||  |||||||||||  |||||||||||||||||||||||    ||| ||||||||||||    
T  18183448 ataacgtatggatctatttgatatatagagaaataattcagggactaatttgatggaaatattattacagaaaggttacattcctcaatcatcttcaacc 18183349  T
Q  548 tcttttca 555  Q
    ||||||||    
T  18183348 tcttttca 18183341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 450 - 553
Target Start/End: Original strand, 31802990 - 31803097
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca----tcattcatcttcaa 545  Q
    |||||| ||||||||| ||||||||| |||  ||||||||||||  |||||||||||  |||||||||| |||||| |||||    ||| ||||||||||    
T  31802990 atataacgtagggatctatttgatagatagagaaataattcagggactaatttgatggcaatattattatagaaagattacatttctcaatcatcttcaa 31803089  T
Q  546 cctctttt 553  Q
    ||||||||    
T  31803090 cctctttt 31803097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 313 - 366
Target Start/End: Complemental strand, 42559323 - 42559269
Alignment:
Q  313 gacttatgccttgttaatgccccatagttgggttg-tttttgcctatgtaatatt 366  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  42559323 gacttatgacttgttaatgccccatagttgggttgctttttgcctatgtaatatt 42559269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 458 - 556
Target Start/End: Original strand, 42135661 - 42135763
Alignment:
Q  458 tagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca----tcattcatcttcaacctctttt 553  Q
    |||||||| ||||||||| |||| ||||||||||||  ||||| |||||  |||||||||||||||| ||||||    | | ||||||||||||||||||    
T  42135661 tagggatctatttgatagatagtgaaataattcagggactaatatgatggaaatattattacagaaaagttacatttttgaatcatcttcaacctctttt 42135760  T
Q  554 cat 556  Q
    |||    
T  42135761 cat 42135763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 450 - 556
Target Start/End: Original strand, 44158699 - 44158809
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca----tcattcatcttcaa 545  Q
    |||||| ||||||||| ||||||||| |||| ||||||||||||  ||||| |||||  |||||||||||| ||| ||||||    | | ||||||||||    
T  44158699 atataacgtagggatctatttgatagatagtgaaataattcagggactaatatgatggaaatattattacataaatgttacatttcttaatcatcttcaa 44158798  T
Q  546 cctcttttcat 556  Q
    |||||||||||    
T  44158799 cctcttttcat 44158809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 313 - 381
Target Start/End: Original strand, 43869875 - 43869943
Alignment:
Q  313 gacttatgccttgttaatgccccatagttgggttgtttttgcctatgtaatatttcagacttatgactt 381  Q
    |||||||| |||||||||||||  ||||| ||||| ||||||||||||||||||||| ||||| |||||    
T  43869875 gacttatgacttgttaatgccctgtagtttggttgcttttgcctatgtaatatttcaaacttaagactt 43869943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 308 - 375
Target Start/End: Original strand, 51545888 - 51545956
Alignment:
Q  308 tttaagacttatgccttgttaatgcccca-tagttgggttgtttttgcctatgtaatatttcagactta 375  Q
    |||| |||||||| ||||||||||||| | ||||||||||| ||||||||||||||||||||| |||||    
T  51545888 tttatgacttatgacttgttaatgcccaaatagttgggttgcttttgcctatgtaatatttcaaactta 51545956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 450 - 532
Target Start/End: Original strand, 6576513 - 6576595
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttacat 532  Q
    |||||| ||| | ||| ||||||||| |||  ||||||||||||| |||||||||||  |||||||||||||||| |||||||    
T  6576513 atataacgtatgaatctatttgatagatagaaaaataattcaggaactaatttgatggaaatattattacagaaatgttacat 6576595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 450 - 558
Target Start/End: Complemental strand, 3370336 - 3370227
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttacat-cattcatcttcaacct 548  Q
    |||||||||||||| | |||||||| |||| ||||||||| |    |||||||||||  |||||    ||||||||||| ||| ||||||||||||||||    
T  3370336 atataatgtagggaacgatttgatacttaggcaaataatttaacgactaatttgatggaaatatatggacagaaaggttgcattcattcatcttcaacct 3370237  T
Q  549 cttttcatta 558  Q
    ||||||||||    
T  3370236 cttttcatta 3370227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 450 - 556
Target Start/End: Complemental strand, 33679922 - 33679812
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca----tcattcatcttcaa 545  Q
    |||||| ||| ||||| ||||||||| |||  ||||||||||||  | |||||||||  |||||||||||| ||||||||||    | | ||||||||||    
T  33679922 atataacgtatggatctatttgatagatagagaaataattcagggacaaatttgatggaaatattattacaaaaaggttacatttctgaatcatcttcaa 33679823  T
Q  546 cctcttttcat 556  Q
    |||||||||||    
T  33679822 cctcttttcat 33679812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 450 - 556
Target Start/End: Complemental strand, 45379766 - 45379656
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca----tcattcatcttcaa 545  Q
    |||||| ||| ||||| ||||||||| |||| |||||||||| |  ||||| |||||| |||||||||||| ||| ||||||    | | ||||||||||    
T  45379766 atataacgtatggatctatttgatagatagtgaaataattcaaggactaatatgatgaaaatattattacataaatgttacatttttgaatcatcttcaa 45379667  T
Q  546 cctcttttcat 556  Q
    |||||||||||    
T  45379666 cctcttttcat 45379656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 308 - 381
Target Start/End: Complemental strand, 47264760 - 47264687
Alignment:
Q  308 tttaagacttatgccttgttaatgccccatagttgggttgtttttgcctatgtaatatttcagacttatgactt 381  Q
    |||||| |||||| ||||||||||||||| | |||||||| |||||| |||||||| | ||||| |||||||||    
T  47264760 tttaagtcttatgacttgttaatgccccaaaattgggttgcttttgcttatgtaatttctcagaattatgactt 47264687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 452 - 556
Target Start/End: Original strand, 5783995 - 5784101
Alignment:
Q  452 ataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca--tcattcatcttcaacctc 549  Q
    ||||| |||||||| |||||||||| |  |||||||||||||  ||||| ||||| ||| ||||| ||||| | |  |||  ||||||||||||||||||    
T  5783995 ataatttagggatcgatttgatagtaatacaaataattcagggactaatctgatggtaaaattataacagatatgcaacatttcattcatcttcaacctc 5784094  T
Q  550 ttttcat 556  Q
    |||||||    
T  5784095 ttttcat 5784101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 18063917 - 18063867
Alignment:
Q  313 gacttatgccttgttaatgccccatagttgggttg-tttttgcctatgtaa 362  Q
    |||||||| |||||||||||||||||||||||||| ||||||| |||||||    
T  18063917 gacttatgacttgttaatgccccatagttgggttgctttttgcatatgtaa 18063867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 598 - 654
Target Start/End: Original strand, 51110839 - 51110895
Alignment:
Q  598 gatgtttccttaaatgttgcagcaacattcttaaagaacacgctaagtacaagccgc 654  Q
    ||||||||||||||||||||| |||||||||||| ||  | ||||||||||| ||||    
T  51110839 gatgtttccttaaatgttgcaacaacattcttaaggactaagctaagtacaaaccgc 51110895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 450 - 532
Target Start/End: Complemental strand, 35478768 - 35478686
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttacat 532  Q
    |||||| ||| | ||| ||||||||| |||  ||||||||||||  |||||||||||  |||||||||| ||||| |||||||    
T  35478768 atataacgtatgaatctatttgatagatagaaaaataattcagggactaatttgatggaaatattattaaagaaatgttacat 35478686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 597 - 631
Target Start/End: Original strand, 50058050 - 50058084
Alignment:
Q  597 agatgtttccttaaatgttgcagcaacattcttaa 631  Q
    |||||||||||||||||||||| ||||||||||||    
T  50058050 agatgtttccttaaatgttgcaacaacattcttaa 50058084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 262
Target Start/End: Original strand, 51122245 - 51122298
Alignment:
Q  209 ttctcctttccactaaaaccttcaccatcatcttctctccaaaatcatcatcat 262  Q
    |||||||| || |||||||||||| || | ||| ||||||||||||||||||||    
T  51122245 ttctccttcccgctaaaaccttcatcaccttctcctctccaaaatcatcatcat 51122298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 591 - 631
Target Start/End: Original strand, 24549759 - 24549799
Alignment:
Q  591 caaatcagatgtttccttaaatgttgcagcaacattcttaa 631  Q
    |||||| |||||||||||||| |||||| ||||||||||||    
T  24549759 caaatcggatgtttccttaaacgttgcaacaacattcttaa 24549799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 452 - 571
Target Start/End: Original strand, 51122813 - 51122935
Alignment:
Q  452 ataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttacatca---ttcatcttcaacct 548  Q
    ||||| |||||||| ||||||||| ||| || | |||| | |  ||||| |||||  |||||| | ||| ||||||||||| |   ||||||||||||||    
T  51122813 ataatctagggatcgatttgatagatagccataaaatttaaggactaatctgatgtaaatattttgacataaaggttacatgaagattcatcttcaacct 51122912  T
Q  549 cttttcattagaactttgcacac 571  Q
    |||||||||| ||| || |||||    
T  51122913 cttttcattacaacattacacac 51122935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 75; Significance: 3e-34; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 450 - 589
Target Start/End: Complemental strand, 25371489 - 25371348
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca--tcattcatcttcaacc 547  Q
    |||||| |||| |||| ||||||||||||| ||||||||||| |  ||||||||||| ||||||||||||||||| ||||||  ||||||||||||||||    
T  25371489 atataaggtagtgatcgatttgatagttagacaaataattcaaggactaatttgatggtaatattattacagaaatgttacatttcattcatcttcaacc 25371390  T
Q  548 tcttttcattagaactttgcacactccaagaacaatacaata 589  Q
    |||||||||||||||||| ||||  || | ||||||||||||    
T  25371389 tcttttcattagaactttacacatgcctataacaatacaata 25371348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 307 - 381
Target Start/End: Complemental strand, 33749359 - 33749285
Alignment:
Q  307 gtttaagacttatgccttgttaatgccccatagttgggttgtttttgcctatgtaatatttcagacttatgactt 381  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||| |||||||||||||||    
T  33749359 gtttaagacttatgacttgttaatgccccatagttgggttgcttttgcctatgtcatatctcagacttatgactt 33749285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 449 - 589
Target Start/End: Complemental strand, 10771184 - 10771043
Alignment:
Q  449 catataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttacat-cattcatcttcaacc 547  Q
    ||||||||||||||||  |||| ||| ||||||||||||||||    ||||||||||| ||||||||  ||||||| ||||||| |||||||||||||||    
T  10771184 catataatgtagggattgatttaataattagtcaaataattcaacgactaatttgatggtaatattacgacagaaatgttacattcattcatcttcaacc 10771085  T
Q  548 tcttttcattagaactttgcacactccaagaacaatacaata 589  Q
    |||||||||||| || || |||||| | |  |||||||||||    
T  10771084 tcttttcattagcacattacacacttctaatacaatacaata 10771043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 308 - 381
Target Start/End: Complemental strand, 38882291 - 38882218
Alignment:
Q  308 tttaagacttatgccttgttaatgccccatagttgggttgtttttgcctatgtaatatttcagacttatgactt 381  Q
    ||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||    
T  38882291 tttaagacttatgacttgttaatgccccatatttgggttgcttttgcctatgtaatttttcagacttatgactt 38882218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 307 - 386
Target Start/End: Original strand, 31822559 - 31822638
Alignment:
Q  307 gtttaagacttatgccttgttaatgccccatagttgggttgtttttgcctatgtaatatttcagacttatgacttctaac 386  Q
    |||||||||||| | |||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||| ||||    
T  31822559 gtttaagacttacgacttgttaatgccccatagttgggttgcttttgcctatgtaatttctcagacttatgacttataac 31822638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 307 - 408
Target Start/End: Original strand, 1321505 - 1321613
Alignment:
Q  307 gtttaagacttatgccttgttaatgccccatagttgggttgtttttgcctatgtaatatttcagacttatgactt-----cta--acttttgcctatgta 399  Q
    |||||| ||||||| |||||||||||||||||||| ||||| ||||||||||||||| | |||||||||||||||     |||  |||||||||||||||    
T  1321505 gtttaaaacttatgacttgttaatgccccatagttaggttgcttttgcctatgtaatttctcagacttatgacttatgacctatgacttttgcctatgta 1321604  T
Q  400 atatttcag 408  Q
    |||||||||    
T  1321605 atatttcag 1321613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 308 - 381
Target Start/End: Complemental strand, 33159558 - 33159485
Alignment:
Q  308 tttaagacttatgccttgttaatgccccatagttgggttgtttttgcctatgtaatatttcagacttatgactt 381  Q
    ||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||| | |||||||||||||||    
T  33159558 tttaagacttatgacttggtaatgccccatagttgggttgttttcgcctatgtaatttctcagacttatgactt 33159485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 307 - 439
Target Start/End: Complemental strand, 24527711 - 24527573
Alignment:
Q  307 gtttaagacttatgccttgttaatgccccatagttgggttgtttttgcctatgtaatatttcagacttatgactt-----cta--acttttgcctatgta 399  Q
    |||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||| | ||||||||| |||||     |||  |||||||||||||||    
T  24527711 gtttaagacttatgacttgttaatgccccatagttaggttg-ttttgcctatgtaatttctcagacttacgacttatgacctacgacttttgcctatgta 24527613  T
Q  400 atatttcaggatcaagttatgtcttctgacttttttactt 439  Q
    |||||||||  |||| || ||| ||||| | |||||||||    
T  24527612 atatttcagtttcaatttgtgtgttctggcatttttactt 24527573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 450 - 589
Target Start/End: Complemental strand, 12516135 - 12515996
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca--tcattcatcttcaacc 547  Q
    |||||||||||||||| ||||||||||||| ||| ||||| |||  ||||| ||||| ||| |||||||| |||||  ||||  ||||||||||||| ||    
T  12516135 atataatgtagggatcgatttgatagttagacaattaatttagggactaatatgatggtaaaattattactgaaagactacatttcattcatcttcatcc 12516036  T
Q  548 tcttttcattagaactttgcacactccaagaacaatacaata 589  Q
    ||||||||||| |||| |  |||| || ||||||||||||||    
T  12516035 tcttttcattacaactct--acacacctagaacaatacaata 12515996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 386 - 452
Target Start/End: Original strand, 10269038 - 10269104
Alignment:
Q  386 cttttgcctatgtaatatttcaggatcaagttatgtcttctgacttttttactttgttctgcacata 452  Q
    |||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||    
T  10269038 cttttgtctatgtaatatttcaggatcaagttgtgtcttgtgacttttttactttgttatgcacata 10269104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 386 - 452
Target Start/End: Complemental strand, 11031996 - 11031930
Alignment:
Q  386 cttttgcctatgtaatatttcaggatcaagttatgtcttctgacttttttactttgttctgcacata 452  Q
    |||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  11031996 cttttgccaatgcaatatttcaggatcaagttgtgtcttctgacttttttactttgttatgcacata 11031930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 450 - 565
Target Start/End: Complemental strand, 42895551 - 42895432
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca----tcattcatcttcaa 545  Q
    |||||| ||||| ||| ||||||||| |||  |||||||||| |  ||||||||||| ||||||||||||| ||| ||||||    ||| ||| ||||||    
T  42895551 atataacgtaggaatctatttgatagatagagaaataattcaaggactaatttgatggtaatattattacataaatgttacattcctcaatcaccttcaa 42895452  T
Q  546 cctcttttcattagaacttt 565  Q
    ||||||||||||||||||||    
T  42895451 cctcttttcattagaacttt 42895432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 450 - 558
Target Start/End: Complemental strand, 17807702 - 17807593
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca-tcattcatcttcaacct 548  Q
    ||||||||| ||||||||||||||| || | ||||||||| |||  |||||||||||  ||||||   ||| ||||||| || |||||||||||||||||    
T  17807702 atataatgttgggatcaatttgatacttcggcaaataatttagggactaatttgatggaaatatttcgacaaaaaggttgcattcattcatcttcaacct 17807603  T
Q  549 cttttcatta 558  Q
    ||||||||||    
T  17807602 cttttcatta 17807593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 450 - 559
Target Start/End: Original strand, 31822775 - 31822888
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca----tcattcatcttcaa 545  Q
    |||||| ||||||||| ||||||||| |||  ||||||||||||  |||||||||||  |||||||||| |||||| |||||    ||| ||||||||||    
T  31822775 atataacgtagggatctatttgatagatagataaataattcagggactaatttgatggcaatattattatagaaagattacatttctcaatcatcttcaa 31822874  T
Q  546 cctcttttcattag 559  Q
    |||||||| |||||    
T  31822875 cctcttttgattag 31822888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 450 - 526
Target Start/End: Complemental strand, 38882075 - 38881999
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaagg 526  Q
    |||||||||||||||| ||||||||| |||  || |||||||||  ||||||||||| |||||||||||||||||||    
T  38882075 atataatgtagggatctatttgatagatagagaagtaattcagggactaatttgatggtaatattattacagaaagg 38881999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 313 - 375
Target Start/End: Original strand, 37803230 - 37803293
Alignment:
Q  313 gacttatgccttgttaatgcccca-tagttgggttgtttttgcctatgtaatatttcagactta 375  Q
    |||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||    
T  37803230 gacttatgacttgttaatgccccaatagttgggttgcttttgcctatgtaatatttcaaactta 37803293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 308 - 381
Target Start/End: Complemental strand, 462079 - 462006
Alignment:
Q  308 tttaagacttatgccttgttaatgccccatagttgggttgtttttgcctatgtaatatttcagacttatgactt 381  Q
    |||||||||| || ||||||||||||||||| || ||||||||| ||||||||||| | ||||| |||||||||    
T  462079 tttaagacttgtgacttgttaatgccccataattaggttgttttagcctatgtaatttctcagatttatgactt 462006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 386 - 454
Target Start/End: Original strand, 9186133 - 9186202
Alignment:
Q  386 cttttgcctatgtaatatttcaggatcaagttatgtcttctg-acttttttactttgttctgcacatata 454  Q
    |||||||| ||||||||||| ||||||||||| || |||||| | |||||||||||||||||||||||||    
T  9186133 cttttgccaatgtaatattttaggatcaagttgtgacttctgaatttttttactttgttctgcacatata 9186202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 450 - 559
Target Start/End: Complemental strand, 33749135 - 33749022
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca----tcattcatcttcaa 545  Q
    |||||| ||||||||| ||||||||| |||  |||||| |||||| |||||||||||  | |||||||| |||||| |||||    ||| ||||||||||    
T  33749135 atataacgtagggatctatttgatagatagagaaataactcaggaactaatttgatggcagtattattatagaaagattacatttctcaatcatcttcaa 33749036  T
Q  546 cctcttttcattag 559  Q
    |||||||| |||||    
T  33749035 cctcttttgattag 33749022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 450 - 489
Target Start/End: Complemental strand, 10268260 - 10268221
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaataatt 489  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  10268260 atataatgtagggatcaatttgatagttagtcaaataatt 10268221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 314 - 369
Target Start/End: Complemental strand, 15143466 - 15143411
Alignment:
Q  314 acttatgccttgttaatgccccatagttgggttgtttttgcctatgtaatatttca 369  Q
    ||||||| |||||||||||||||||||||  ||| |||||||||||||||||||||    
T  15143466 acttatgacttgttaatgccccatagttgaattgcttttgcctatgtaatatttca 15143411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 313 - 375
Target Start/End: Original strand, 44527739 - 44527802
Alignment:
Q  313 gacttatgccttgttaatgcccca-tagttgggttgtttttgcctatgtaatatttcagactta 375  Q
    ||||| || ||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||    
T  44527739 gacttctgacttgttaatgccccaatagttgggttgcttttgcctatgtaatatttcaaactta 44527802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 450 - 556
Target Start/End: Original strand, 1321721 - 1321831
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca----tcattcatcttcaa 545  Q
    |||||| ||||||||| ||||||||| |||| ||||||||||||  ||||| |||||  |||||||||||| ||| |||| |    | | ||||||||||    
T  1321721 atataacgtagggatctatttgatagatagtgaaataattcagggactaatatgatggaaatattattacataaatgttatatttctgaatcatcttcaa 1321820  T
Q  546 cctcttttcat 556  Q
    |||||||||||    
T  1321821 cctcttttcat 1321831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 450 - 558
Target Start/End: Original strand, 24285667 - 24285776
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca-tcattcatcttcaacct 548  Q
    |||||||||||||||| |||||||| |||| ||||||||| |    ||| |||||||  |||||| | ||| ||||||| || ||||||||||||||| |    
T  24285667 atataatgtagggatcgatttgatacttaggcaaataatttaaatactagtttgatggaaatattttgacataaaggttgcattcattcatcttcaacat 24285766  T
Q  549 cttttcatta 558  Q
    ||||||||||    
T  24285767 cttttcatta 24285776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 264
Target Start/End: Original strand, 9184697 - 9184789
Alignment:
Q  172 acatttcattcggacacgtcaaacaagtccatgactcttctcctttccactaaaaccttcaccatcatcttctctccaaaatcatcatcatct 264  Q
    |||||||| || ||||| ||||| | ||||||||   |||||||| || |||||||||||| |||| ||  ||||||||||||||||||||||    
T  9184697 acatttcactcagacacatcaaatacgtccatgatctttctccttcccgctaaaaccttcatcatcttcacctctccaaaatcatcatcatct 9184789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 264
Target Start/End: Complemental strand, 11721581 - 11721489
Alignment:
Q  172 acatttcattcggacacgtcaaacaagtccatgactcttctcctttccactaaaaccttcaccatcatcttctctccaaaatcatcatcatct 264  Q
    |||||||| |||||||| ||||| | |||| |||   |||||||| || |||||||||||||| || ||  ||||||||||||||||||||||    
T  11721581 acatttcactcggacacatcaaatacgtccctgatctttctccttcccgctaaaaccttcaccttcttcacctctccaaaatcatcatcatct 11721489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 597 - 665
Target Start/End: Complemental strand, 28848081 - 28848013
Alignment:
Q  597 agatgtttccttaaatgttgcagcaacattcttaaagaacacgctaagtacaagccgcatatctctgct 665  Q
    |||||||| ||||||||||| | ||||||||||||  ||||| |||||||||| |||| ||||||||||    
T  28848081 agatgttttcttaaatgttgtaacaacattcttaagaaacacactaagtacaaaccgcctatctctgct 28848013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 450 - 554
Target Start/End: Complemental strand, 461863 - 461755
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca----tcattcatcttcaa 545  Q
    |||||| ||| ||||| ||||||||| |||   ||||||||| |  |||||||||||  |||||||||||||||| ||||||    ||| ||||||||||    
T  461863 atataacgtatggatctatttgatagatagaacaataattcaaggactaatttgatggaaatattattacagaaatgttacattcctcaatcatcttcaa 461764  T
Q  546 cctcttttc 554  Q
    |||||||||    
T  461763 cctcttttc 461755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 308 - 367
Target Start/End: Original strand, 9186093 - 9186152
Alignment:
Q  308 tttaagacttatgccttgttaatgccccatagttgggttgtttttgcctatgtaatattt 367  Q
    |||||||| | || ||||||||| |||||||||||||||| ||||||| |||||||||||    
T  9186093 tttaagacatgtgacttgttaataccccatagttgggttgcttttgccaatgtaatattt 9186152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 461 - 532
Target Start/End: Complemental strand, 24527485 - 24527414
Alignment:
Q  461 ggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttacat 532  Q
    ||||| ||||||||| |||| ||||||||||||  ||||| ||||   ||||||||||||||||||||||||    
T  24527485 ggatctatttgatagatagtgaaataattcagggactaatatgatagaaatattattacagaaaggttacat 24527414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 308 - 347
Target Start/End: Original strand, 38884465 - 38884504
Alignment:
Q  308 tttaagacttatgccttgttaatgccccatagttgggttg 347  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  38884465 tttaagacttatgacttgttaatgccccatagttgggttg 38884504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 407 - 454
Target Start/End: Original strand, 38884540 - 38884587
Alignment:
Q  407 aggatcaagttatgtcttctgacttttttactttgttctgcacatata 454  Q
    ||||| ||||| ||||||||||||||||||||||| ||||||||||||    
T  38884540 aggatgaagttgtgtcttctgacttttttactttggtctgcacatata 38884587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 483 - 554
Target Start/End: Complemental strand, 33159310 - 33159235
Alignment:
Q  483 aataattcaggatctaatttgatgataatattattacagaaaggttaca----tcattcatcttcaacctcttttc 554  Q
    |||||||||||  |||||||||||  |||||||||||| ||||||||||    ||| |||||||||||||||||||    
T  33159310 aataattcagggactaatttgatggaaatattattacaaaaaggttacattcctcaatcatcttcaacctcttttc 33159235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 483 - 554
Target Start/End: Complemental strand, 37525493 - 37525417
Alignment:
Q  483 aataattcaggatctaatttgatgataatattattacagaaaggttaca-----tcattcatcttcaacctcttttc 554  Q
    |||||||||||  || ||||||||| |||||||||||| ||||||||||     ||| |||||||||||||||||||    
T  37525493 aataattcagggactgatttgatgaaaatattattacataaaggttacaattcctcaatcatcttcaacctcttttc 37525417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 450 - 489
Target Start/End: Complemental strand, 11031865 - 11031826
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaataatt 489  Q
    |||| ||||||||||| |||||||||||||||||||||||    
T  11031865 atattatgtagggatcgatttgatagttagtcaaataatt 11031826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 450 - 588
Target Start/End: Original strand, 11790098 - 11790239
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttacat---cattcatcttcaac 546  Q
    ||||||||||| |||| ||||||||  ||| ||||||||| | |  | |||||||||| |||||| |  |||||| ||| |||    |||||||||||||    
T  11790098 atataatgtagagatcgatttgataaatagacaaataatttaaggaccaatttgatgaaaatattttgccagaaatgttgcattcatattcatcttcaac 11790197  T
Q  547 ctcttttcattagaactttgcacactccaagaacaatacaat 588  Q
    ||||||| |||| ||| || ||||| || || ||||||||||    
T  11790198 ctcttttgattacaacattacacacacctagtacaatacaat 11790239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 450 - 489
Target Start/End: Complemental strand, 12515536 - 12515497
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaataatt 489  Q
    |||||||||||||||  |||||||||||||||||||||||    
T  12515536 atataatgtagggattgatttgatagttagtcaaataatt 12515497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 381
Target Start/End: Original strand, 9186056 - 9186109
Alignment:
Q  329 atgccccatagttgggttg-tttttgcctatgtaatatttcagacttatgactt 381  Q
    ||||||||||||||||||  |||||||||||||||||||| |||| | ||||||    
T  9186056 atgccccatagttgggtttctttttgcctatgtaatatttaagacatgtgactt 9186109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Original strand, 10269019 - 10269060
Alignment:
Q  329 atgccccatagttgggttgtttttgcctatgtaatatttcag 370  Q
    ||||||||||||||| ||| ||||| ||||||||||||||||    
T  10269019 atgccccatagttggattgcttttgtctatgtaatatttcag 10269060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 3e-34; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 308 - 454
Target Start/End: Original strand, 24497500 - 24497644
Alignment:
Q  308 tttaagacttatgccttgttaatgccccatagttgggttgtttttgcctatgtaatatttcagacttatgacttctaacttttgcctatgtaatatttca 407  Q
    |||| |||||||| |||| ||||| |||||  |||| ||| |||||||||||||||||||| |||||| ||||| |  ||||||||||||||||||||||    
T  24497500 tttatgacttatgacttgctaatgtcccatttttgg-ttgcttttgcctatgtaatatttctgacttaagacttatg-cttttgcctatgtaatatttca 24497597  T
Q  408 ggatcaagttatgtcttctgacttttttactttgttctgcacatata 454  Q
    |||||||||| |||||||| ||||||||||||| |||||||||||||    
T  24497598 ggatcaagttgtgtcttctaacttttttactttcttctgcacatata 24497644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 307 - 408
Target Start/End: Original strand, 32089009 - 32089110
Alignment:
Q  307 gtttaagacttatgccttgttaatgccccatagttgggttgtttttgcctatgtaatatttcagacttatgacttctaacttttgcctatgtaatatttc 406  Q
    |||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||| | ||||||||||||| | | |||| ||| |||||||||||||    
T  32089009 gtttaagacttatgacttattaatgccccatagttgggttgcttttgcctatgtaatttctcagacttatgacctatgacttatgcatatgtaatatttc 32089108  T
Q  407 ag 408  Q
    ||    
T  32089109 ag 32089110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 450 - 565
Target Start/End: Complemental strand, 32836668 - 32836549
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca----tcattcatcttcaa 545  Q
    |||||| ||||||||| ||||||||| |||  |||||||||| |  ||||||||||| ||||||||||||||||| ||||||    ||| ||||||||||    
T  32836668 atataacgtagggatctatttgatagatagagaaataattcaaggactaatttgatggtaatattattacagaaatgttacattcctcaatcatcttcaa 32836569  T
Q  546 cctcttttcattagaacttt 565  Q
    ||||||||||||||||||||    
T  32836568 cctcttttcattagaacttt 32836549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 307 - 407
Target Start/End: Original strand, 35399794 - 35399893
Alignment:
Q  307 gtttaagacttatgccttgttaatgccccatagttgggttgtttttgcctatgtaatatttcagacttatgacttctaacttttgcctatgtaatatttc 406  Q
    |||||| ||||||| |||||||||| ||||||||||||||| ||||||||||||||| | ||||||||||||| | | |||| |||||||||||||||||    
T  35399794 gtttaaaacttatgacttgttaatgtcccatagttgggttgcttttgcctatgtaatttctcagacttatgacctat-acttatgcctatgtaatatttc 35399892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 310 - 381
Target Start/End: Complemental strand, 18727576 - 18727505
Alignment:
Q  310 taagacttatgccttgttaatgccccatagttgggttgtttttgcctatgtaatatttcagacttatgactt 381  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||||| | ||| |||||||||||    
T  18727576 taagacttatgacttgttaatgccccatagttgggttgcttttgcctatgtaatttctcaaacttatgactt 18727505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 450 - 586
Target Start/End: Original strand, 1344098 - 1344236
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca--tcattcatcttcaacc 547  Q
    |||||||| |||||||||||| ||||||||  |||||||||| |  ||||| ||||| ||| ||||||| ||||| | ||||  ||||||||||| ||||    
T  1344098 atataatgcagggatcaatttaatagttagataaataattcaaggactaatatgatggtaaaattattaaagaaaagctacatttcattcatctttaacc 1344197  T
Q  548 tcttttcattagaactttgcacactccaagaacaataca 586  Q
    ||||||  ||| |||||| ||||| || |||||||||||    
T  1344198 tcttttagttacaactttacacacacctagaacaataca 1344236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 450 - 552
Target Start/End: Original strand, 27076819 - 27076922
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca-tcattcatcttcaacct 548  Q
    ||||||||||||||||||||||||| || | ||||||||| |||  ||||||||||   |||||| | ||||||||||| || |||||||||||||||||    
T  27076819 atataatgtagggatcaatttgatacttgggcaaataatttagggactaatttgatagaaatattttgacagaaaggttgcattcattcatcttcaacct 27076918  T
Q  549 cttt 552  Q
    ||||    
T  27076919 cttt 27076922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 450 - 589
Target Start/End: Original strand, 40329776 - 40329919
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttacatc----attcatcttcaa 545  Q
    |||||| ||| | ||| ||||||||| |||  |||||||| |||  ||||||||||   ||||||||||||||||||| ||||     | |||||||||     
T  40329776 atataacgtatgaatctatttgatagatagagaaataatttagggactaatttgatcgaaatattattacagaaaggtgacatttctaaatcatcttcat 40329875  T
Q  546 cctcttttcattagaactttgcacactccaagaacaatacaata 589  Q
    |||||||||||||||||||| ||||| || ||||||||||||||    
T  40329876 cctcttttcattagaactttacacacgcctagaacaatacaata 40329919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 450 - 552
Target Start/End: Complemental strand, 38177412 - 38177306
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca----tcattcatcttcaa 545  Q
    |||||| ||||||||| ||||||||| |||  |||||||| | |  ||||||||||| ||||||||||||||||| ||||||    ||| ||||||||||    
T  38177412 atataacgtagggatctatttgatagatagagaaataatttaaggactaatttgatggtaatattattacagaaatgttacattcctcaatcatcttcaa 38177313  T
Q  546 cctcttt 552  Q
    |||||||    
T  38177312 cctcttt 38177306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 450 - 552
Target Start/End: Complemental strand, 38204636 - 38204530
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca----tcattcatcttcaa 545  Q
    |||||| ||||||||| ||||||||| |||  |||||||| | |  ||||||||||| ||||||||||||||||| ||||||    ||| ||||||||||    
T  38204636 atataacgtagggatctatttgatagatagagaaataatttaaggactaatttgatggtaatattattacagaaatgttacattcctcaatcatcttcaa 38204537  T
Q  546 cctcttt 552  Q
    |||||||    
T  38204536 cctcttt 38204530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 198 - 273
Target Start/End: Original strand, 6114934 - 6115009
Alignment:
Q  198 gtccatgactcttctcctttccactaaaaccttcaccatcatcttctctccaaaatcatcatcatctgcatagatc 273  Q
    |||| ||||||||||||||||| |||||||||| |||||| || ||||||||||| || |||||||| ||| ||||    
T  6114934 gtccttgactcttctcctttccgctaaaaccttaaccatcttcatctctccaaaagcaccatcatcttcatcgatc 6115009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 463 - 557
Target Start/End: Complemental strand, 28036617 - 28036522
Alignment:
Q  463 atcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca-tcattcatcttcaacctcttttcatt 557  Q
    |||||||||||||||||| | | ||||||||  ||||||||  | ||||||||| ||| ||| |||||| |||||||||||||| |||||||||||    
T  28036617 atcaatttgatagttagtaagacaattcagggactaatttgccggtaatattatgacaaaaaagttacattcattcatcttcaatctcttttcatt 28036522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 470 - 565
Target Start/End: Complemental strand, 1343974 - 1343877
Alignment:
Q  470 tgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaagg--ttacatcattcatcttcaacctcttttcattagaacttt 565  Q
    |||||||||| ||||||||||||   ||||| ||||| ||| ||||||||| |||||  |||  ||||||||||||||||||||||| ||| ||||||    
T  1343974 tgatagttagacaaataattcagagactaatatgatggtaaaattattacataaaggctttatttcattcatcttcaacctcttttcgttacaacttt 1343877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 184 - 273
Target Start/End: Original strand, 13452214 - 13452303
Alignment:
Q  184 gacacgtcaaacaagtccatgactcttctcctttccactaaaaccttcaccatcatcttctctccaaaatcatcatcatctgcatagatc 273  Q
    ||||| |||||||||||| ||| ||||| ||||  |  |||||||||||||||| || ||||||||||| ||||||||||| ||| ||||    
T  13452214 gacacatcaaacaagtccctgagtcttcaccttcacggtaaaaccttcaccatcttcatctctccaaaagcatcatcatcttcattgatc 13452303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 461 - 555
Target Start/End: Complemental strand, 43317561 - 43317463
Alignment:
Q  461 ggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca----tcattcatcttcaacctcttttca 555  Q
    ||||| ||||||||  |||  ||||||||||||  |||||||||||   ||||||||||||||||||||||    ||| ||||||||||||||||||||    
T  43317561 ggatctatttgatatatagagaaataattcagggactaatttgatggagatattattacagaaaggttacattcctcaatcatcttcaacctcttttca 43317463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 329 - 381
Target Start/End: Original strand, 24497463 - 24497516
Alignment:
Q  329 atgccccatagttgggttg-tttttgcctatgtaatatttcagacttatgactt 381  Q
    ||||||||||||||||||  ||||||||||||||||||||  ||||||||||||    
T  24497463 atgccccatagttgggtttctttttgcctatgtaatatttatgacttatgactt 24497516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 316 - 363
Target Start/End: Original strand, 19997964 - 19998012
Alignment:
Q  316 ttatgccttgttaatgccccatagttgggtt-gtttttgcctatgtaat 363  Q
    ||||| |||||||||||| |||||||||||| |||||||||||||||||    
T  19997964 ttatgacttgttaatgcctcatagttgggttggtttttgcctatgtaat 19998012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 496 - 571
Target Start/End: Original strand, 27349837 - 27349915
Alignment:
Q  496 ctaatttgatgataatattattacagaaaggttacatca---ttcatcttcaacctcttttcattagaactttgcacac 571  Q
    |||||||||||  |||||| | ||||||||||||||| |   |||||||||||||||||||||||| ||| || |||||    
T  27349837 ctaatttgatgtaaatattttgacagaaaggttacatgaagattcatcttcaacctcttttcattacaacattacacac 27349915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 450 - 559
Target Start/End: Original strand, 32089218 - 32089331
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca----tcattcatcttcaa 545  Q
    |||||| | ||||||| ||||||||| |||  ||||| |||| |  |||||||||||  |||||||||| |||||| |||||    ||| ||||||||||    
T  32089218 atataacgcagggatctatttgatagatagagaaatagttcatggactaatttgatggcaatattattatagaaagattacatttctcaatcatcttcaa 32089317  T
Q  546 cctcttttcattag 559  Q
    |||||||| |||||    
T  32089318 cctcttttgattag 32089331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 450 - 559
Target Start/End: Original strand, 33257062 - 33257175
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca----tcattcatcttcaa 545  Q
    |||||| ||||| ||| ||||||||| |||  |||||||| |||  |||||||||||  |||||||||| |||||| | |||    ||| ||||||||||    
T  33257062 atataacgtaggaatctatttgatagatagataaataatttagggactaatttgatggcaatattattatagaaagatcacatttttcaatcatcttcaa 33257161  T
Q  546 cctcttttcattag 559  Q
    |||||||| |||||    
T  33257162 cctcttttgattag 33257175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 452 - 486
Target Start/End: Complemental strand, 25509828 - 25509794
Alignment:
Q  452 ataatgtagggatcaatttgatagttagtcaaata 486  Q
    |||||||||||||||||||||| ||||||||||||    
T  25509828 ataatgtagggatcaatttgattgttagtcaaata 25509794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 313 - 366
Target Start/End: Original strand, 27076496 - 27076550
Alignment:
Q  313 gacttatgccttgttaatgccccatagttgggttg-tttttgcctatgtaatatt 366  Q
    |||||||| |||||||||| ||||| ||||||||  |||||||||||||||||||    
T  27076496 gacttatgacttgttaatgtcccatggttgggtttctttttgcctatgtaatatt 27076550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 314 - 363
Target Start/End: Original strand, 27076603 - 27076653
Alignment:
Q  314 acttatgccttgttaatgccccatagttgggttg-tttttgcctatgtaat 363  Q
    ||||||| |||||||||| | ||||||||||||| ||||||||||||||||    
T  27076603 acttatgacttgttaatgactcatagttgggttgctttttgcctatgtaat 27076653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 407 - 453
Target Start/End: Original strand, 27076709 - 27076755
Alignment:
Q  407 aggatcaagttatgtcttctgacttttttactttgttctgcacatat 453  Q
    |||||||| ||||||||| | ||||||||||||| ||||||||||||    
T  27076709 aggatcaaattatgtctttttacttttttactttattctgcacatat 27076755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 459 - 553
Target Start/End: Complemental strand, 42620238 - 42620142
Alignment:
Q  459 agggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca--tcattcatcttcaacctctttt 553  Q
    ||||||| |||||||||| |  |||||||||||||  ||||| ||||| ||| ||||| ||||| | |  |||  ||||||||||||||||||||||    
T  42620238 agggatcgatttgatagtaacacaaataattcagggactaatctgatggtaaaattataacagatatgcaacatttcattcatcttcaacctctttt 42620142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 482 - 559
Target Start/End: Original strand, 35400036 - 35400117
Alignment:
Q  482 aaataattcaggatctaatttgatgataatattattacagaaaggttaca----tcattcatcttcaacctcttttcattag 559  Q
    ||||||||||||  |||||||||||  |||||||||| |||||| |||||    ||| ||||||||||| |||||| |||||    
T  35400036 aaataattcagggactaatttgatggcaatattattatagaaagattacatttctcaatcatcttcaacatcttttgattag 35400117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 3e-25; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 461 - 589
Target Start/End: Complemental strand, 2976586 - 2976454
Alignment:
Q  461 ggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttacat----cattcatcttcaacctcttttcat 556  Q
    ||||| ||||||||| |||  |||||||| |||  ||||||||||| ||||||||||||||||||| |||||    || |||||||||||||||||||||    
T  2976586 ggatctatttgatagatagagaaataatttaggggctaatttgatggtaatattattacagaaagggtacattcctcaatcatcttcaacctcttttcat 2976487  T
Q  557 tagaactttgcacactccaagaacaatacaata 589  Q
    ||||||||| ||||| || ||| ||||||||||    
T  2976486 tagaactttacacacgcctagagcaatacaata 2976454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 450 - 565
Target Start/End: Original strand, 23774951 - 23775070
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca----tcattcatcttcaa 545  Q
    |||||| ||||||||| ||||||||| |||  ||||||||||    ||||||||||||||||||||||||||||| ||||||    ||| ||||||||||    
T  23774951 atataacgtagggatctatttgatagatagagaaataattcaaagactaatttgatgataatattattacagaaatgttacattcctcaatcatcttcaa 23775050  T
Q  546 cctcttttcattagaacttt 565  Q
    ||||||||||||||||||||    
T  23775051 cctcttttcattagaacttt 23775070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 449 - 557
Target Start/End: Complemental strand, 32843689 - 32843581
Alignment:
Q  449 catataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca-tcattcatcttcaacc 547  Q
    ||||||||||||||||| |||||||| |||  ||||||||||| |  ||||||||||| ||||||||| || ||||||||||| ||||||||||||||||    
T  32843689 catataatgtagggatcgatttgataattacgcaaataattcatggactaatttgatggtaatattatgac-gaaaggttacattcattcatcttcaacc 32843591  T
Q  548 tcttttcatt 557  Q
    ||||||||||    
T  32843590 tcttttcatt 32843581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 307 - 439
Target Start/End: Complemental strand, 18429643 - 18429504
Alignment:
Q  307 gtttaagacttatgccttgttaatgccccatagttgggttgtttttgcctatgtaatatttcagacttatgactt-----cta--acttttgcctatgta 399  Q
    |||||||||||||| |||||||||||| ||||||| ||||| ||||||||||||||| | ||| |||||||||||     |||  |||||||||||||||    
T  18429643 gtttaagacttatgacttgttaatgcctcatagttaggttgcttttgcctatgtaatttctcaaacttatgacttatgacctatgacttttgcctatgta 18429544  T
Q  400 atatttcaggatcaagttatgtcttctgacttttttactt 439  Q
    |||||||||  | || || ||| ||||| |||||||||||    
T  18429543 atatttcagtttgaatttgtgtgttctggcttttttactt 18429504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 450 - 558
Target Start/End: Original strand, 1846900 - 1847012
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca----tcattcatcttcaa 545  Q
    |||||||||||||||| ||||||||| |||  ||||||||||||   ||||||||||  |||||||||||||||| ||||||    ||| ||||||||||    
T  1846900 atataatgtagggatctatttgatagatagagaaataattcagggagtaatttgatggaaatattattacagaaatgttacatttctcaatcatcttcaa 1846999  T
Q  546 cctcttttcatta 558  Q
    |||||||||||||    
T  1847000 cctcttttcatta 1847012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 307 - 381
Target Start/End: Complemental strand, 33851847 - 33851773
Alignment:
Q  307 gtttaagacttatgccttgttaatgccccatagttgggttgtttttgcctatgtaatatttcagacttatgactt 381  Q
    |||||||||||||| |||||||||||||||||||| ||||| |||||| |||||||| | |||||||||||||||    
T  33851847 gtttaagacttatgacttgttaatgccccatagttaggttgcttttgcttatgtaatttctcagacttatgactt 33851773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 450 - 565
Target Start/End: Original strand, 48634671 - 48634790
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca----tcattcatcttcaa 545  Q
    |||||| ||| ||||| ||||||||| |||  |||||||||| |  ||||||||||| ||||||||||||| ||| ||||||    ||| ||||||||||    
T  48634671 atataacgtatggatctatttgatagatagagaaataattcaaggactaatttgatggtaatattattacataaatgttacattcctcaatcatcttcaa 48634770  T
Q  546 cctcttttcattagaacttt 565  Q
    ||||||||||||||||||||    
T  48634771 cctcttttcattagaacttt 48634790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 308 - 381
Target Start/End: Complemental strand, 2976813 - 2976740
Alignment:
Q  308 tttaagacttatgccttgttaatgccccatagttgggttgtttttgcctatgtaatatttcagacttatgactt 381  Q
    ||||| ||||||| |||||||||||||||||||||||||| ||||| ||||||||| | |||||||||||||||    
T  2976813 tttaaaacttatgacttgttaatgccccatagttgggttgcttttgtctatgtaatttctcagacttatgactt 2976740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 450 - 563
Target Start/End: Complemental strand, 30501743 - 30501629
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttacat--cattcatcttcaacc 547  Q
    |||||||||| |||||||||||||||| || |||||| ||||||  ||||| ||||| ||| |||||| ||||| || |||||  |||||||||||||||    
T  30501743 atataatgtaaggatcaatttgatagt-agacaaatacttcagggactaatatgatggtaaaattattgcagaatggctacatttcattcatcttcaacc 30501645  T
Q  548 tcttttcattagaact 563  Q
    ||||||||||| ||||    
T  30501644 tcttttcattacaact 30501629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 450 - 589
Target Start/End: Complemental strand, 26448553 - 26448413
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca--tcattcatcttcaacc 547  Q
    ||||||| |||||||| ||||||||||||| |||||||||||||  | ||| | ||| ||| ||||||||||||||  ||||  |||||||||||||||     
T  26448553 atataatatagggatcgatttgatagttagacaaataattcagggac-aatataatggtaaaattattacagaaagactacatttcattcatcttcaaca 26448455  T
Q  548 tcttttcattagaactttgcacactccaagaacaatacaata 589  Q
    ||||||||||| |||| | ||||| || ||| ||| ||||||    
T  26448454 tcttttcattataactctacacacacctagaccaacacaata 26448413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 450 - 558
Target Start/End: Complemental strand, 23876472 - 23876363
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca-tcattcatcttcaacct 548  Q
    ||||||||||||||||  ||||||| |||| ||||||||| | |  |||||||||||  |||||| | ||||||||||| || | |||||||||||||||    
T  23876472 atataatgtagggatcggtttgatacttaggcaaataatttaaggactaatttgatggaaatattttgacagaaaggttgcattaattcatcttcaacct 23876373  T
Q  549 cttttcatta 558  Q
    ||||||||||    
T  23876372 cttttcatta 23876363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 307 - 439
Target Start/End: Complemental strand, 45256391 - 45256249
Alignment:
Q  307 gtttaagacttatgccttgtt---aatgccccatagttgggttgtttttgcctatgtaatatttcagacttatgacttcta-------acttttgcctat 396  Q
    |||||||||||||| ||||||   |||||| |||||||  |||| ||||||||||||||| | ||||||||||||||| ||       ||||||||||||    
T  45256391 gtttaagacttatgacttgttgttaatgcctcatagttaagttgcttttgcctatgtaatttctcagacttatgacttataacctatgacttttgcctat 45256292  T
Q  397 gtaatatttcaggatcaagttatgtcttctgacttttttactt 439  Q
    ||||||||||||  |||| || ||| ||||| | |||||||||    
T  45256291 gtaatatttcagtttcaatttgtgtgttctggcatttttactt 45256249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 324 - 381
Target Start/End: Complemental strand, 24382585 - 24382528
Alignment:
Q  324 tgttaatgccccatagttgggttgtttttgcctatgtaatatttcagacttatgactt 381  Q
    |||| |||||||||||||||||||||||| |||||||||| | |||||||||||||||    
T  24382585 tgttgatgccccatagttgggttgtttttccctatgtaatttctcagacttatgactt 24382528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 308 - 381
Target Start/End: Complemental strand, 31886419 - 31886347
Alignment:
Q  308 tttaagacttatgccttgttaatgccccatagttgggttgtttttgcctatgtaatatttcagacttatgactt 381  Q
    ||||||||||||| |||||||||||||||||||| |||||  ||| |||||||||| | |||||||||||||||    
T  31886419 tttaagacttatgacttgttaatgccccatagtttggttg-ctttacctatgtaatttctcagacttatgactt 31886347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 313 - 381
Target Start/End: Original strand, 5127008 - 5127076
Alignment:
Q  313 gacttatgccttgttaatgccccatagttgggttgtttttgcctatgtaatatttcagacttatgactt 381  Q
    |||||||| |||||||||||||  ||||| ||||| ||||||||||||||||||||| ||||| |||||    
T  5127008 gacttatgacttgttaatgccctgtagtttggttgcttttgcctatgtaatatttcaaacttaagactt 5127076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 482 - 555
Target Start/End: Complemental strand, 33112654 - 33112577
Alignment:
Q  482 aaataattcaggatctaatttgatgataatattattacagaaaggttaca----tcattcatcttcaacctcttttca 555  Q
    |||||||| |||  |||||||||||| |||||||||||||||||||||||    ||| ||||||||||||||||||||    
T  33112654 aaataatttagggactaatttgatgaaaatattattacagaaaggttacattcctcaatcatcttcaacctcttttca 33112577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 209 - 264
Target Start/End: Complemental strand, 26449076 - 26449021
Alignment:
Q  209 ttctcctttccactaaaaccttcaccatcatcttctctccaaaatcatcatcatct 264  Q
    ||||||||||| ||||||||||||||||| ||  ||||||||||||||||||||||    
T  26449076 ttctcctttccgctaaaaccttcaccatcttcacctctccaaaatcatcatcatct 26449021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 450 - 524
Target Start/End: Complemental strand, 45256172 - 45256098
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaa 524  Q
    |||||| ||||||||| ||||||||| |||| ||||||||||||  ||||| |||||  ||||||||||||||||    
T  45256172 atataacgtagggatctatttgatagatagtgaaataattcagggactaatatgatggaaatattattacagaaa 45256098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 450 - 559
Target Start/End: Complemental strand, 45897839 - 45897727
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca---tcattcatcttcaac 546  Q
    |||||| ||||||||| ||||||||| |||  ||||||||||||   ||||||||||  |||||||||| |||||| |||||   | | |||||||||||    
T  45897839 atataacgtagggatctatttgatagatagataaataattcagggattaatttgatggcaatattattatagaaagattacatatttaatcatcttcaac 45897740  T
Q  547 ctcttttcattag 559  Q
    ||||||| |||||    
T  45897739 ctcttttgattag 45897727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 308 - 381
Target Start/End: Original strand, 5134258 - 5134331
Alignment:
Q  308 tttaagacttatgccttgttaatgccccatagttgggttgtttttgcctatgtaatatttcagacttatgactt 381  Q
    |||| |||||||| |||||||||||||  ||||| | ||| ||||||||||||||||||||| ||||| |||||    
T  5134258 tttatgacttatgacttgttaatgccctgtagtttgattgcttttgcctatgtaatatttcaaacttaagactt 5134331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 309 - 381
Target Start/End: Original strand, 1846682 - 1846754
Alignment:
Q  309 ttaagacttatgccttgttaatgccccatagttgggttgtttttgcctatgtaatatttcagacttatgactt 381  Q
    |||||||| ||| ||||||||||||||||| |||||||  |||||| |||||||| | | |||||||||||||    
T  1846682 ttaagactcatgacttgttaatgccccataattgggtttcttttgcatatgtaatgtcttagacttatgactt 1846754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 450 - 571
Target Start/End: Complemental strand, 35862689 - 35862567
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttacat-cattcatcttcaacct 548  Q
    |||||||||||  |||||||||||| |||| |||| |||| | |  |||||||||||  ||||||   ||| ||||||| ||| ||||||||||||||||    
T  35862689 atataatgtagaaatcaatttgatatttaggcaaacaatttaaggactaatttgatggaaatatttcgacaaaaaggtttcattcattcatcttcaacct 35862590  T
Q  549 cttttcattagaactttgcacac 571  Q
     ||||||||| ||  ||||||||    
T  35862589 tttttcattacaatattgcacac 35862567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 313 - 366
Target Start/End: Complemental strand, 35862906 - 35862852
Alignment:
Q  313 gacttatgccttgttaatgccccatagttgggttg-tttttgcctatgtaatatt 366  Q
    |||| ||| ||||||||||||||| |||||||||| |||||||||||||||||||    
T  35862906 gactcatgacttgttaatgccccacagttgggttgctttttgcctatgtaatatt 35862852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 594 - 631
Target Start/End: Complemental strand, 20961699 - 20961662
Alignment:
Q  594 atcagatgtttccttaaatgttgcagcaacattcttaa 631  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  20961699 atcagatgtttccttaaatgttgcaacaacattcttaa 20961662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 450 - 558
Target Start/End: Complemental strand, 22219215 - 22219106
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca-tcattcatcttcaacct 548  Q
    |||||||| |||||||||||| ||| |||| ||||||||| | |  |||||||||||| ||||||   ||| |||||||  | |||||||||||||||||    
T  22219215 atataatgcagggatcaatttaatacttaggcaaataatttaaggactaatttgatgaaaatatttcgacataaaggttggattcattcatcttcaacct 22219116  T
Q  549 cttttcatta 558  Q
     ||| |||||    
T  22219115 atttccatta 22219106  T

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Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 450 - 552
Target Start/End: Complemental strand, 24382401 - 24382295
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggtta----catcattcatcttcaa 545  Q
    |||||| ||| ||||| ||||||||| |||   ||||||||||   |||||||||||  |||||||||||||||| ||||    ||||| ||||||||||    
T  24382401 atataacgtatggatctatttgatagatagaacaataattcagagactaatttgatggaaatattattacagaaatgttacattcatcaatcatcttcaa 24382302  T
Q  546 cctcttt 552  Q
    |||||||    
T  24382301 cctcttt 24382295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 316 - 381
Target Start/End: Original strand, 41624927 - 41624992
Alignment:
Q  316 ttatgccttgttaatgccccatagttgggttgtttttgcctatgtaatatttcagacttatgactt 381  Q
    ||||| ||||||||||||   ||||| | ||||||||||||||||||||||||| ||||| |||||    
T  41624927 ttatgacttgttaatgccatgtagtttgattgtttttgcctatgtaatatttcaaacttaagactt 41624992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 322 - 367
Target Start/End: Original strand, 54093741 - 54093786
Alignment:
Q  322 cttgttaatgccccatagttgggttgtttttgcctatgtaatattt 367  Q
    ||||||||||| |||||||||||||| |||||||||||| ||||||    
T  54093741 cttgttaatgctccatagttgggttgcttttgcctatgtgatattt 54093786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 450 - 555
Target Start/End: Complemental strand, 31886198 - 31886089
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca----tcattcatcttcaa 545  Q
    |||||| ||| | ||| ||||||||| |||  |||||||| |||  |||||||||||  |||||||||||||| ||||||||    | | ||||||||||    
T  31886198 atataacgtatgaatctatttgatagatagagaaataatttagggactaatttgatggaaatattattacagagaggttacatttctgaatcatcttcaa 31886099  T
Q  546 cctcttttca 555  Q
    ||||||||||    
T  31886098 cctcttttca 31886089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 452 - 571
Target Start/End: Complemental strand, 49495313 - 49495191
Alignment:
Q  452 ataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttacatca---ttcatcttcaacct 548  Q
    ||||| |||||||| ||||||||| ||| || | |||| | |  ||||| |||||  |||||| | ||||||||||||||| |   ||||||||||||||    
T  49495313 ataatctagggatcgatttgatagatagccataaaatttaaggactaatctgatgtaaatattttgacagaaaggttacatgaagattcatcttcaacct 49495214  T
Q  549 cttttcattagaactttgcacac 571  Q
    |||||||||| ||| || |||||    
T  49495213 cttttcattaaaacattacacac 49495191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 407 - 454
Target Start/End: Complemental strand, 7589666 - 7589619
Alignment:
Q  407 aggatcaagttatgtcttctgacttttttactttgttctgcacatata 454  Q
    ||||| ||||| |||||||||| ||||||| |||||||||||||||||    
T  7589666 aggatgaagttgtgtcttctgaattttttaatttgttctgcacatata 7589619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 308 - 347
Target Start/End: Complemental strand, 7589741 - 7589702
Alignment:
Q  308 tttaagacttatgccttgttaatgccccatagttgggttg 347  Q
    ||||||||||||| ||||||||||| ||||||||||||||    
T  7589741 tttaagacttatgacttgttaatgctccatagttgggttg 7589702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 407 - 454
Target Start/End: Original strand, 17260477 - 17260524
Alignment:
Q  407 aggatcaagttatgtcttctgacttttttactttgttctgcacatata 454  Q
    ||||| ||||| ||| ||||||||||||||||||||||| ||||||||    
T  17260477 aggatgaagttgtgtgttctgacttttttactttgttctacacatata 17260524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 313 - 363
Target Start/End: Complemental strand, 22219433 - 22219382
Alignment:
Q  313 gacttatgccttgttaatgccccatagttgggttg-tttttgcctatgtaat 363  Q
    |||||||| |||||||||||| ||||||||||||| ||||||| ||||||||    
T  22219433 gacttatgacttgttaatgcctcatagttgggttgctttttgcttatgtaat 22219382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 450 - 524
Target Start/End: Complemental strand, 18429427 - 18429353
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaa 524  Q
    |||||| ||| ||||| ||||||||| |||| |||||||||| |  ||||| |||||  ||||||||||||||||    
T  18429427 atataacgtaaggatctatttgatagatagtgaaataattcaaggactaatatgatggaaatattattacagaaa 18429353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 308 - 366
Target Start/End: Complemental strand, 32843885 - 32843827
Alignment:
Q  308 tttaagacttatgccttgttaatgccccatagttgggttgtttttgcctatgtaatatt 366  Q
    |||| ||||| || |||||||||||||||||||||| ||| ||||  ||||||||||||    
T  32843885 tttatgacttgtgacttgttaatgccccatagttggattgctttttgctatgtaatatt 32843827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 198 - 264
Target Start/End: Original strand, 54093023 - 54093089
Alignment:
Q  198 gtccatgactcttctcctttccactaaaaccttcaccatcatcttctctccaaaatcatcatcatct 264  Q
    |||||||||  |||||||| || |||||||||||| |||  ||  ||||||||||||||||||||||    
T  54093023 gtccatgacctttctccttcccgctaaaaccttcatcattttcacctctccaaaatcatcatcatct 54093089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 591 - 631
Target Start/End: Complemental strand, 23432727 - 23432687
Alignment:
Q  591 caaatcagatgtttccttaaatgttgcagcaacattcttaa 631  Q
    |||||| ||||||| ||||||||||||| ||||||||||||    
T  23432727 caaatccgatgtttacttaaatgttgcaacaacattcttaa 23432687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 459 - 556
Target Start/End: Original strand, 41945227 - 41945326
Alignment:
Q  459 agggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca--tcattcatcttcaacctcttttcat 556  Q
    ||||||| |||||||||| |  |||||||||||||  ||||| ||||| ||| ||||| ||||| | || |||  ||||  |||||||||||||||||||    
T  41945227 agggatcgatttgatagtaacacaaataattcagggactaatctgatggtaaaattataacagatacgtaacatttcatctatcttcaacctcttttcat 41945326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 1e-24; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 449 - 550
Target Start/End: Complemental strand, 40150951 - 40150849
Alignment:
Q  449 catataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca-tcattcatcttcaacc 547  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |  |||||||| || ||||||||| ||| |||| ||||| ||||||||||||||||    
T  40150951 catataatgtagggatcgatttgatagttagtcaaataattcaaggactaatttgctggtaatattatgacaaaaagattacattcattcatcttcaacc 40150852  T
Q  548 tct 550  Q
    |||    
T  40150851 tct 40150849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 307 - 436
Target Start/End: Complemental strand, 91323 - 91188
Alignment:
Q  307 gtttaagacttatgccttgttaatgccccatagttgggttgtttttgcctatgtaatatttcagacttatgactt-----cta--acttttgcctatgta 399  Q
    |||||||||||||| |||||||||||| |||||||||||||  |||||||||||||||| |||||||||||||||     |||  |||| ||||||||||    
T  91323 gtttaagacttatgacttgttaatgcctcatagttgggttg-ctttgcctatgtaatatctcagacttatgacttatgacctatgacttatgcctatgta 91225  T
Q  400 atatttcaggatcaagttatgtcttctgactttttta 436  Q
    |||||||||  |||| || ||| ||||| ||||||||    
T  91224 atatttcagtttcaatttgtgtgttctgcctttttta 91188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 307 - 381
Target Start/End: Complemental strand, 36296 - 36223
Alignment:
Q  307 gtttaagacttatgccttgttaatgccccatagttgggttgtttttgcctatgtaatatttcagacttatgactt 381  Q
    |||||||||||||| |||||||||||| |||||||||||||  |||||||||||||||| |||||||||||||||    
T  36296 gtttaagacttatgacttgttaatgcctcatagttgggttg-ctttgcctatgtaatatctcagacttatgactt 36223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 172 - 273
Target Start/End: Original strand, 20941036 - 20941137
Alignment:
Q  172 acatttcattcggacacgtcaaacaagtccatgactcttctcctttccactaaaaccttcaccatcatcttctctccaaaatcatcatcatctgcataga 271  Q
    |||||||| || ||||| |||||||||||  ||||||||||||||||| ||||||||||||| | | || ||||||||||||||||| ||||| ||| ||    
T  20941036 acatttcactcagacacatcaaacaagtctctgactcttctcctttccgctaaaaccttcacaaacttcatctctccaaaatcatcaccatcttcatcga 20941135  T
Q  272 tc 273  Q
    ||    
T  20941136 tc 20941137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 449 - 545
Target Start/End: Original strand, 40151991 - 40152087
Alignment:
Q  449 catataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca-tcattcatcttcaa 545  Q
    ||||||||||||||||| |||| |||||||||||||||||||| |  |||||||| || ||| ||||| |||||||||||||| ||||||||||||||    
T  40151991 catataatgtagggatcgatttaatagttagtcaaataattcatggactaatttgctggtaa-attatgacagaaaggttacattcattcatcttcaa 40152087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 399 - 454
Target Start/End: Original strand, 363200 - 363255
Alignment:
Q  399 aatatttcaggatcaagttatgtcttctgacttttttactttgttctgcacatata 454  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  363200 aatatttcaggatcaagttgtgtcttctgacttttttattttgttctgcacatata 363255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 450 - 565
Target Start/End: Original strand, 37418065 - 37418184
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca----tcattcatcttcaa 545  Q
    |||||| ||||  ||| ||||||||| |||  |||||||||| |  ||||||||||| ||||||||||||||||| ||||||    ||| ||||||||||    
T  37418065 atataacgtagaaatctatttgatagatagagaaataattcaaggactaatttgatggtaatattattacagaaatgttacattcctcaatcatcttcaa 37418164  T
Q  546 cctcttttcattagaacttt 565  Q
    ||||||||||||| ||||||    
T  37418165 cctcttttcattataacttt 37418184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 452 - 592
Target Start/End: Original strand, 20941607 - 20941748
Alignment:
Q  452 ataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttacat-cattcatcttcaacctct 550  Q
    |||||||| | ||||||||||||  ||| ||||||||| | |  |||||||||||  ||||||   ||||||||||| ||| ||||||||||||||||||    
T  20941607 ataatgtaagaatcaatttgatatataggcaaataattaaaggactaatttgatggaaatatttcgacagaaaggttgcattcattcatcttcaacctct 20941706  T
Q  551 tttcattagaactttgcacactccaagaacaatacaataaca 592  Q
    |||||||| ||| || ||||| || || |||||||| |||||    
T  20941707 tttcattacaacgttacacacacctagcacaatacagtaaca 20941748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 450 - 559
Target Start/End: Complemental strand, 36081 - 35968
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca----tcattcatcttcaa 545  Q
    |||||| ||||||||| ||||||||| |||  ||||||||||||  |||||||||||  |||||||||| |||||| |||||    ||| ||||||||||    
T  36081 atataacgtagggatctatttgatagatagagaaataattcagggactaatttgatggcaatattattatagaaagattacatttctcaatcatcttcaa 35982  T
Q  546 cctcttttcattag 559  Q
    |||||||| |||||    
T  35981 cctcttttgattag 35968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 142 - 273
Target Start/End: Original strand, 361727 - 361859
Alignment:
Q  142 acccctctcttatccatt-atttacatacttacatttcattcggacacgtcaaacaagtccatgactcttctcctttccactaaaaccttcaccatcatc 240  Q
    |||||||||||| ||||| || ||||| |||||||||||||   |||| |||||||||||| ||||| |||||||| |  |||||||  |||||| | |     
T  361727 acccctctcttacccattcatctacatccttacatttcatttatacacatcaaacaagtccttgactattctccttcctgctaaaactgtcaccaacttt 361826  T
Q  241 ttctctccaaaatcatcatcatctgcatagatc 273  Q
     ||||||||||||||||||||||| ||| ||||    
T  361827 atctctccaaaatcatcatcatcttcatcgatc 361859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 313 - 375
Target Start/End: Complemental strand, 32607706 - 32607643
Alignment:
Q  313 gacttatgccttgttaatgcccca-tagttgggttgtttttgcctatgtaatatttcagactta 375  Q
    |||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||    
T  32607706 gacttatgacttgttaatgccccaatagttgggttgcttttgcctatgtaatatttcaaactta 32607643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 461 - 565
Target Start/End: Original strand, 42880122 - 42880230
Alignment:
Q  461 ggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttacat----cattcatcttcaacctcttttcat 556  Q
    ||||| ||||||||| |||  ||| |||||| |  ||||||||||| ||||||||| ||||||| |||||||    || |||||||||||||||||||||    
T  42880122 ggatctatttgatagatagagaaacaattcaaggactaatttgatggtaatattataacagaaatgttacattcctcaatcatcttcaacctcttttcat 42880221  T
Q  557 tagaacttt 565  Q
    |||||||||    
T  42880222 tagaacttt 42880230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 308 - 381
Target Start/End: Original strand, 25620255 - 25620327
Alignment:
Q  308 tttaagacttatgccttgttaatgccccatagttgggttgtttttgcctatgtaatatttcagacttatgactt 381  Q
    |||||||||| || ||||||||||||||||||||||||| |||||||||||||||| | | | |||||||||||    
T  25620255 tttaagacttgtgacttgttaatgccccatagttgggtt-tttttgcctatgtaatttctaaaacttatgactt 25620327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 450 - 559
Target Start/End: Complemental strand, 91108 - 90995
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca----tcattcatcttcaa 545  Q
    |||||| ||| ||||| ||||||||| |||  ||||||||||||  |||||||||||  |||||||||| |||||| |||||    ||| ||||||||||    
T  91108 atataacgtatggatctatttgatagatagagaaataattcagggactaatttgatggcaatattattatagaaagattacatttctcaatcatcttcaa 91009  T
Q  546 cctcttttcattag 559  Q
    |||||||| |||||    
T  91008 cctcttttgattag 90995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 313 - 369
Target Start/End: Complemental strand, 860501 - 860445
Alignment:
Q  313 gacttatgccttgttaatgccccatagttgggttgtttttgcctatgtaatatttca 369  Q
    |||||||| ||||||| ||| |||||||||||||| |||||||||||||||||||||    
T  860501 gacttatgacttgttagtgcgccatagttgggttgcttttgcctatgtaatatttca 860445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 450 - 558
Target Start/End: Complemental strand, 26581797 - 26581688
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca-tcattcatcttcaacct 548  Q
    |||||||||||||||| |||||||| |||| ||||||||| | |  |||||||||||  ||| ||   ||| ||| ||| || |||||||||||||||||    
T  26581797 atataatgtagggatcgatttgatacttaggcaaataatttaaggactaatttgatggaaatttttcgacaaaaaagttgcattcattcatcttcaacct 26581698  T
Q  549 cttttcatta 558  Q
    ||||||||||    
T  26581697 cttttcatta 26581688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 322 - 369
Target Start/End: Complemental strand, 62429 - 62382
Alignment:
Q  322 cttgttaatgccccatagttgggttgtttttgcctatgtaatatttca 369  Q
    |||||||| || ||||||||||||||||||||| ||||||||||||||    
T  62429 cttgttaaggctccatagttgggttgtttttgcttatgtaatatttca 62382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 450 - 532
Target Start/End: Original strand, 25620467 - 25620549
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttacat 532  Q
    |||||| ||| ||||| ||||||||| |||   ||||||||| |  |||||||||||  ||||||||||||||||||||||||    
T  25620467 atataacgtatggatctatttgatagatagagcaataattcaaggactaatttgatggaaatattattacagaaaggttacat 25620549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 450 - 558
Target Start/End: Original strand, 161302 - 161411
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca-tcattcatcttcaacct 548  Q
    |||||| |||||||||||||||||| |||| ||||||||| | |  |||||||||||  ||||||   ||||||||||| || || |||||||| || |     
T  161302 atataacgtagggatcaatttgatacttaggcaaataatttaaggactaatttgatggaaatatttcgacagaaaggttgcattcgttcatcttgaatcc 161401  T
Q  549 cttttcatta 558  Q
    ||||||||||    
T  161402 cttttcatta 161411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 450 - 556
Target Start/End: Original strand, 42002882 - 42002992
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca----tcattcatcttcaa 545  Q
    |||||| ||| ||||| ||||||||| ||   ||||||||||||  | |||||||||| |||||||||| |||| |||||||    | | ||||||||||    
T  42002882 atataacgtatggatctatttgatagataaagaaataattcagggacaaatttgatgaaaatattattatagaagggttacatttctgaatcatcttcaa 42002981  T
Q  546 cctcttttcat 556  Q
    |||||||||||    
T  42002982 cctcttttcat 42002992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 459 - 556
Target Start/End: Complemental strand, 11022489 - 11022390
Alignment:
Q  459 agggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca--tcattcatcttcaacctcttttcat 556  Q
    ||||||| |||||||||| |  |||||||||||||  ||||| ||||| ||| ||||| ||||| | |  |||  |||||||||||||||||||||||||    
T  11022489 agggatcgatttgatagtaatacaaataattcagggactaatctgatggtaaaattataacagatatgcaacatttcattcatcttcaacctcttttcat 11022390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 459 - 556
Target Start/End: Original strand, 28247312 - 28247411
Alignment:
Q  459 agggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca--tcattcatcttcaacctcttttcat 556  Q
    ||||||| |||||||||| |  |||||||||||||  ||||| ||||| ||| ||||| ||||| | |  |||  |||||||||||||||||||||||||    
T  28247312 agggatcgatttgatagtaacacaaataattcagggactaatctgatggtaaaattataacagatatgcaacatttcattcatcttcaacctcttttcat 28247411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 459 - 556
Target Start/End: Original strand, 38149154 - 38149253
Alignment:
Q  459 agggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca--tcattcatcttcaacctcttttcat 556  Q
    ||||||| |||||||||| |  |||||||||||||  ||||| ||||| ||| ||||| ||||| | |  |||  |||||||||||||||||||||||||    
T  38149154 agggatcgatttgatagtaacacaaataattcagggactaatctgatggtaaaattataacagatacgcaacatttcattcatcttcaacctcttttcat 38149253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 450 - 489
Target Start/End: Original strand, 363317 - 363356
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaataatt 489  Q
    ||||||| ||| ||||||||||||||||||||||||||||    
T  363317 atataatatagagatcaatttgatagttagtcaaataatt 363356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 264
Target Start/End: Complemental strand, 4416742 - 4416687
Alignment:
Q  209 ttctcctttccactaaaaccttcaccatcatcttctctccaaaatcatcatcatct 264  Q
    ||||||||||| ||||| |||||| |||| ||  ||||||||||||||||||||||    
T  4416742 ttctcctttccgctaaatccttcatcatcttcacctctccaaaatcatcatcatct 4416687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 594 - 629
Target Start/End: Original strand, 30947854 - 30947889
Alignment:
Q  594 atcagatgtttccttaaatgttgcagcaacattctt 629  Q
    ||||||||||||||||||||||||| ||||||||||    
T  30947854 atcagatgtttccttaaatgttgcaacaacattctt 30947889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 190 - 264
Target Start/End: Complemental strand, 11315146 - 11315072
Alignment:
Q  190 tcaaacaagtccatgactcttctcctttccactaaaaccttcaccatcatcttctctccaaaatcatcatcatct 264  Q
    ||||||| |||| ||||  |||||||| |  |||||||||||| |||| ||  ||||||||||||||||||||||    
T  11315146 tcaaacacgtccctgacctttctccttcctgctaaaaccttcatcatcttcacctctccaaaatcatcatcatct 11315072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 336 - 374
Target Start/End: Complemental strand, 15806612 - 15806574
Alignment:
Q  336 atagttgggttgtttttgcctatgtaatatttcagactt 374  Q
    ||||||| |||||||||||||||||||||||||| ||||    
T  15806612 atagttgagttgtttttgcctatgtaatatttcaaactt 15806574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 190 - 264
Target Start/End: Original strand, 40097875 - 40097949
Alignment:
Q  190 tcaaacaagtccatgactcttctcctttccactaaaaccttcaccatcatcttctctccaaaatcatcatcatct 264  Q
    ||||||| |||| ||||  |||||||| || ||| |||||||| |||| ||  ||||||||||||||||||||||    
T  40097875 tcaaacatgtccctgacctttctccttcccgctagaaccttcatcatcttcacctctccaaaatcatcatcatct 40097949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 313 - 454
Target Start/End: Original strand, 40098843 - 40098982
Alignment:
Q  313 gacttatgccttgttaatgccccatagttgggttgtttttgcctatgtaatatttcagacttatgacttctaact--tttgcctatgtaatatttcagga 410  Q
    |||||||| ||||||||| ||| ||| || ||||| ||| ||||||||||||||||| ||||| ||||| | |||  ||||   |||  || ||  ||||    
T  40098843 gacttatgacttgttaataccctatattttggttgcttt-gcctatgtaatatttcatacttaagacttatgacttatttg---atgatattttcaagga 40098938  T
Q  411 tcaagttatgtcttctgacttttttactttgttctgcacatata 454  Q
    | ||||| ||| ||||| |||||||||||||||||||| |||||    
T  40098939 tgaagttgtgtattctgtcttttttactttgttctgcaaatata 40098982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 375
Target Start/End: Complemental strand, 4415680 - 4415631
Alignment:
Q  326 ttaatgccccatagttgggttgtttttgcctatgtaatatttcagactta 375  Q
    |||||||  ||||||||||||| ||||||||| ||||||||||| |||||    
T  4415680 ttaatgcttcatagttgggttgcttttgcctacgtaatatttcaaactta 4415631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 512 - 586
Target Start/End: Complemental strand, 11313542 - 11313466
Alignment:
Q  512 attattacagaaaggttacat--cattcatcttcaacctcttttcattagaactttgcacactccaagaacaataca 586  Q
    ||||||||| ||||| |||||  ||||||||||||| |||||||||||| || | | ||||| || |||||||||||    
T  11313542 attattacaaaaaggctacatttcattcatcttcaatctcttttcattacaattctacacacacctagaacaataca 11313466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 366
Target Start/End: Complemental strand, 40151154 - 40151101
Alignment:
Q  313 gacttatgccttgttaatgccccatagttgggttgtttttgcctatgtaatatt 366  Q
    ||||||||  |||||||||||| |||||||||||| ||||  ||||||||||||    
T  40151154 gacttatgatttgttaatgccctatagttgggttgattttcgctatgtaatatt 40151101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 496 - 571
Target Start/End: Original strand, 7744577 - 7744655
Alignment:
Q  496 ctaatttgatgataatattattacagaaaggttacatca---ttcatcttcaacctcttttcattagaactttgcacac 571  Q
    ||||| |||||  |||||| | ||||||||||||||| |   |||||||||||||||||||||||| ||| || |||||    
T  7744577 ctaatctgatgtaaatattttgacagaaaggttacatgaagattcatcttcaacctcttttcattacaacattacacac 7744655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 7e-23; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 594 - 665
Target Start/End: Original strand, 32669175 - 32669246
Alignment:
Q  594 atcagatgtttccttaaatgttgcagcaacattcttaaagaacacgctaagtacaagccgcatatctctgct 665  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||||||||| || |||||||||||||||    
T  32669175 atcagatgtttccttaaatgttgcaacaacattcttaaggaacacgctaagtataaaccgcatatctctgct 32669246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 387 - 454
Target Start/End: Original strand, 31209954 - 31210021
Alignment:
Q  387 ttttgcctatgtaatatttcaggatcaagttatgtcttctgacttttttactttgttctgcacatata 454  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| || |||||    
T  31209954 ttttgcctatgtaatatttcaggatcaagttgtgtcatctgacttttttactttgttctacatatata 31210021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 449 - 557
Target Start/End: Original strand, 17935363 - 17935471
Alignment:
Q  449 catataatgtagggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca-tcattcatcttcaacc 547  Q
    ||||||||||||| ||| |||||||| |||  ||||||||||| |  |||||||| || ||||||||| || ||||||||||| ||||||||||||||||    
T  17935363 catataatgtaggaatcgatttgatatttacgcaaataattcatggactaatttgttggtaatattatgac-gaaaggttacattcattcatcttcaacc 17935461  T
Q  548 tcttttcatt 557  Q
    ||||||||||    
T  17935462 tcttttcatt 17935471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 308 - 408
Target Start/End: Original strand, 4645666 - 4645773
Alignment:
Q  308 tttaagacttatgccttgttaatgccccatagttgggttgtttttgcctatgtaatatttcagacttatgactt-----cta--acttttgcctatgtaa 400  Q
    |||||| |||||| ||||||||||||||| | ||||||||||||||| |||||||| | |||||||||||||||     |||  ||||||||||||||||    
T  4645666 tttaagtcttatgacttgttaatgccccaaaattgggttgtttttgcttatgtaatttctcagacttatgacttattacctatgacttttgcctatgtaa 4645765  T
Q  401 tatttcag 408  Q
    ||||||||    
T  4645766 tatttcag 4645773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 591 - 646
Target Start/End: Original strand, 12464629 - 12464684
Alignment:
Q  591 caaatcagatgtttccttaaatgttgcagcaacattcttaaagaacacgctaagta 646  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  12464629 caaatcagatgtttccttaaatgttgcaacaacattcttaaggaacacgctaagta 12464684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 311 - 370
Target Start/End: Original strand, 31209916 - 31209975
Alignment:
Q  311 aagacttatgccttgttaatgccccatagttgggttgtttttgcctatgtaatatttcag 370  Q
    |||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  31209916 aagacttatgacttgttaatgcctcatagttgggttgattttgcctatgtaatatttcag 31209975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 147 - 262
Target Start/End: Original strand, 31209151 - 31209267
Alignment:
Q  147 tctcttatccatt-atttacatacttacatttcattcggacacgtcaaacaagtccatgactcttctcctttccactaaaaccttcaccatcatcttctc 245  Q
    ||||||| ||||| |||||||| |||||||||||||| ||||| ||||| |||| | | ||||||| |||| || ||||||| ||||||||| || ||||    
T  31209151 tctcttacccattcatttacatccttacatttcattcagacacatcaaataagttcctcactcttcaccttcccgctaaaactttcaccatcttcatctc 31209250  T
Q  246 tccaaaatcatcatcat 262  Q
     | ||||||||||||||    
T  31209251 cctaaaatcatcatcat 31209267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 202 - 273
Target Start/End: Complemental strand, 4314661 - 4314590
Alignment:
Q  202 atgactcttctcctttccactaaaaccttcaccatcatcttctctccaaaatcatcatcatctgcatagatc 273  Q
    ||||||||||||||| || ||||||||||||| ||| || | ||||||||||||||||||||| ||| ||||    
T  4314661 atgactcttctccttcccgctaaaaccttcacaatcttcatttctccaaaatcatcatcatcttcatcgatc 4314590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 308 - 381
Target Start/End: Original strand, 29114230 - 29114303
Alignment:
Q  308 tttaagacttatgccttgttaatgccccatagttgggttgtttttgcctatgtaatatttcagacttatgactt 381  Q
    |||||| |||||| ||||||||||||||| | |||||||| |||||| |||||||| | ||||| |||||||||    
T  29114230 tttaagtcttatgacttgttaatgccccaaaattgggttgcttttgcttatgtaatttctcagaattatgactt 29114303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 594 - 654
Target Start/End: Complemental strand, 13730022 - 13729962
Alignment:
Q  594 atcagatgtttccttaaatgttgcagcaacattcttaaagaacacgctaagtacaagccgc 654  Q
    |||||||||||||||||||||| || |||||||||||  |||||| |||||||||| ||||    
T  13730022 atcagatgtttccttaaatgttacaacaacattcttacggaacacactaagtacaaaccgc 13729962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 482 - 532
Target Start/End: Complemental strand, 30640118 - 30640068
Alignment:
Q  482 aaataattcaggatctaatttgatgataatattattacagaaaggttacat 532  Q
    ||||||||||||  |||||||||||  ||||||||||||||||||||||||    
T  30640118 aaataattcagggactaatttgatggaaatattattacagaaaggttacat 30640068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 459 - 556
Target Start/End: Complemental strand, 17951517 - 17951418
Alignment:
Q  459 agggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca--tcattcatcttcaacctcttttcat 556  Q
    ||||||| |||||||||| |  |||||||||||||  ||||| ||||| ||| ||||| ||||| | |  |||  |||||||||||||||||||||||||    
T  17951517 agggatcgatttgatagtaacacaaataattcagggactaatctgatggtaaaattataacagatatgcaacatttcattcatcttcaacctcttttcat 17951418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 308 - 375
Target Start/End: Complemental strand, 25170769 - 25170704
Alignment:
Q  308 tttaagacttatgccttgttaatgccccatagttgggttgtttttgcctatgtaatatttcagactta 375  Q
    |||| |||||||| |||||||||||||||||| ||||||| |||| ||||  |||||||||| |||||    
T  25170769 tttatgacttatgacttgttaatgccccataggtgggttgctttttccta--taatatttcaaactta 25170704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 459 - 556
Target Start/End: Complemental strand, 35175337 - 35175238
Alignment:
Q  459 agggatcaatttgatagttagtcaaataattcaggatctaatttgatgataatattattacagaaaggttaca--tcattcatcttcaacctcttttcat 556  Q
    ||||||||||||||| || |  |||||||||||||  ||||| ||||| ||| ||||| ||||| | |  |||  |||||||||||||||||||||||||    
T  35175337 agggatcaatttgatggtaacacaaataattcagggactaatctgatggtaaaattataacagatatgcaacatttcattcatcttcaacctcttttcat 35175238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 450 - 489
Target Start/End: Original strand, 31210084 - 31210123
Alignment:
Q  450 atataatgtagggatcaatttgatagttagtcaaataatt 489  Q
    |||||||||| ||||| |||||||||||||||||||||||    
T  31210084 atataatgtaaggatcgatttgatagttagtcaaataatt 31210123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 598 - 631
Target Start/End: Complemental strand, 28043708 - 28043675
Alignment:
Q  598 gatgtttccttaaatgttgcagcaacattcttaa 631  Q
    ||||||||||||||||||||| ||||||||||||    
T  28043708 gatgtttccttaaatgttgcaacaacattcttaa 28043675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 598 - 631
Target Start/End: Complemental strand, 28044565 - 28044532
Alignment:
Q  598 gatgtttccttaaatgttgcagcaacattcttaa 631  Q
    ||||||||||||||||||||| ||||||||||||    
T  28044565 gatgtttccttaaatgttgcaacaacattcttaa 28044532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 381
Target Start/End: Original strand, 31209876 - 31209929
Alignment:
Q  329 atgccccatagttgggttg-tttttgcctatgtaatatttcagacttatgactt 381  Q
    ||||||||||| ||||||  |||||||||||||||||||  |||||||||||||    
T  31209876 atgccccatagctgggtttctttttgcctatgtaatattgaagacttatgactt 31209929  T

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Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 221 - 273
Target Start/End: Original strand, 17933662 - 17933714
Alignment:
Q  221 ctaaaaccttcaccatcatcttctctccaaaatcatcatcatctgcatagatc 273  Q
    |||||| |||||||||| || ||||||||||| ||||||||||| ||| ||||    
T  17933662 ctaaaagcttcaccatcttcatctctccaaaagcatcatcatcttcatcgatc 17933714  T

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Target: scaffold0129 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 316 - 375
Target Start/End: Original strand, 5637 - 5696
Alignment:
Q  316 ttatgccttgttaatgccccatagttgggttgtttttgcctatgtaatatttcagactta 375  Q
    ||||| |||||||||||||||||||||||||  ||||||||||||||||||||| |||||    
T  5637 ttatgacttgttaatgccccatagttgggttacttttgcctatgtaatatttcaaactta 5696  T

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Target: scaffold0204 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 323 - 369
Target Start/End: Complemental strand, 28855 - 28809
Alignment:
Q  323 ttgttaatgccccatagttgggttgtttttgcctatgtaatatttca 369  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||    
T  28855 ttgttaatgccccatagttgggttgcttttgcctatgtaatatttca 28809  T

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Target: scaffold0072 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 594 - 631
Target Start/End: Original strand, 19075 - 19112
Alignment:
Q  594 atcagatgtttccttaaatgttgcagcaacattcttaa 631  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  19075 atcagatgtttccttaaatgttgctacaacattcttaa 19112  T

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Target: scaffold0062 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 594 - 631
Target Start/End: Complemental strand, 1729 - 1692
Alignment:
Q  594 atcagatgtttccttaaatgttgcagcaacattcttaa 631  Q
    |||| |||||||||||||||||||| ||||||||||||    
T  1729 atcatatgtttccttaaatgttgcaacaacattcttaa 1692  T

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