View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4125_low_62 (Length: 307)
Name: NF4125_low_62
Description: NF4125
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4125_low_62 |
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Alignment Details
Target: chr7 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 1 - 290
Target Start/End: Original strand, 47698530 - 47698819
Alignment:
| Q |
1 |
cctgaaaatggtaagtaatgcatccagccaacataactcaagtcattcaaggaaaaacaacagaagaaaatataagtcatcctctaatgactaatctgaa |
100 |
Q |
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| T |
47698530 |
cctgaaaatggtaagtaatgcatccagccaacataactcaagtcattcaaggaaaaacaacagaagaaaatataagtcatcctctaatgactaatctgaa |
47698629 |
T |
|
| Q |
101 |
attggatttaacctgtcaataattggatccaaaagctttgctttctttatatgtcttactttaattttttcccttctcatagctttattgtaaaacatgt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
47698630 |
attggatttaacctgtcaataattggatccaaaagctttgctttctttatatgtcttactttaattttttttcttctcatagctttattgtaaaacatgt |
47698729 |
T |
|
| Q |
201 |
aaagcagatgcacattaaatcttcgatgtaaacaacagaaaagcatatctcgttcacaggaacttgaaatgaaaggcattgtttcttctc |
290 |
Q |
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|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
47698730 |
aaagtagatgcacattaaatcttcgatgtaaacaacagaaaagcatatctcgttcacaggaacttgaaatgaaaggcatcgtttcttctc |
47698819 |
T |
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