View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4130_low_6 (Length: 215)
Name: NF4130_low_6
Description: NF4130
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4130_low_6 |
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Alignment Details
Target: chr2 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 29 - 198
Target Start/End: Original strand, 18612921 - 18613092
Alignment:
| Q |
29 |
atcttcttctgccccttaagttcaaccgtctttcatttttctaaactgacggttgattgatttnnnnnnnnnnnnnnn-caatagggagatattagtgca |
127 |
Q |
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| T |
18612921 |
atcttctcctgccccttaagttcaaccgtctctcatttttttaatctaacggttgattgatttaaaaagaaaacaaaaacaatagagagatattagtgca |
18613020 |
T |
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| Q |
128 |
ggccatacatatatata-atatgaaaaagggctagatttgatccaaatttgagctagaaaatgaggtgattt |
198 |
Q |
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| T |
18613021 |
ggacatacatatatatatatatgaagaagggctagatttgatccaaatttgagctagaaaatgaggtgattt |
18613092 |
T |
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