View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4131_low_19 (Length: 215)
Name: NF4131_low_19
Description: NF4131
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4131_low_19 |
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Alignment Details
Target: chr7 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 44827294 - 44827496
Alignment:
| Q |
1 |
tttgattatgttgacctggtccacacaagaataaggacatggagaaaaaactcttaaaaataaggaatgatgaacattttgaatgacatagatggggagc |
100 |
Q |
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| T |
44827294 |
tttgatcatgttgacctggtccacacgagaataaggacatggagaaaaaactcttaaaaataaggaatgatgaacattttgaatgacatagatggggagc |
44827393 |
T |
|
| Q |
101 |
ggagagtactccccatcccgcctcgttgacgtctccaattccaccacatctcatatatataactttcacctcatactaatcaaacactcctataaaatat |
200 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44827394 |
ggagagtactccccatcccgcctcgttgacgtcttcaattccaccacatctcatatatataactttcacctcatactaatcaaacactcctataaaatat |
44827493 |
T |
|
| Q |
201 |
gat |
203 |
Q |
| |
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||| |
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| T |
44827494 |
gat |
44827496 |
T |
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