View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4131_low_2 (Length: 551)

Name: NF4131_low_2
Description: NF4131
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4131_low_2
NF4131_low_2
[»] chr1 (20 HSPs)
chr1 (337-532)||(51989075-51989270)
chr1 (1-262)||(51988631-51988899)
chr1 (143-211)||(4806789-4806857)
chr1 (137-215)||(16924471-16924549)
chr1 (264-300)||(51989000-51989036)
chr1 (145-202)||(43284033-43284090)
chr1 (142-193)||(3573336-3573387)
chr1 (129-184)||(26086914-26086969)
chr1 (136-215)||(30678803-30678882)
chr1 (137-207)||(7996687-7996756)
chr1 (137-183)||(12269006-12269052)
chr1 (137-183)||(15729423-15729469)
chr1 (138-215)||(24978238-24978315)
chr1 (145-190)||(29059420-29059465)
chr1 (137-202)||(35308178-35308243)
chr1 (136-192)||(15973025-15973081)
chr1 (154-190)||(26861139-26861175)
chr1 (142-190)||(27853353-27853401)
chr1 (136-188)||(32826722-32826774)
chr1 (143-183)||(32950783-32950823)
[»] chr8 (16 HSPs)
chr8 (1-65)||(6744107-6744171)
chr8 (1-65)||(6654369-6654433)
chr8 (1-65)||(6734771-6734835)
chr8 (138-215)||(3650514-3650591)
chr8 (137-184)||(5448451-5448498)
chr8 (138-183)||(42541869-42541914)
chr8 (137-215)||(1230651-1230729)
chr8 (137-183)||(1243763-1243809)
chr8 (137-183)||(1254463-1254509)
chr8 (142-188)||(9639996-9640042)
chr8 (142-188)||(18422470-18422516)
chr8 (137-183)||(29716722-29716768)
chr8 (142-183)||(28084280-28084321)
chr8 (136-209)||(40574757-40574830)
chr8 (137-193)||(33445563-33445619)
chr8 (138-182)||(43910898-43910942)
[»] chr7 (14 HSPs)
chr7 (143-202)||(25251509-25251568)
chr7 (134-190)||(964756-964812)
chr7 (142-214)||(5526723-5526795)
chr7 (150-202)||(19815738-19815790)
chr7 (135-202)||(23221383-23221450)
chr7 (144-214)||(38779980-38780050)
chr7 (1-65)||(38432557-38432620)
chr7 (136-202)||(5435564-5435630)
chr7 (137-191)||(22267574-22267628)
chr7 (137-183)||(28200407-28200453)
chr7 (136-186)||(35523099-35523149)
chr7 (170-215)||(2703447-2703492)
chr7 (155-212)||(35836030-35836087)
chr7 (142-202)||(23177940-23178000)
[»] chr2 (11 HSPs)
chr2 (137-215)||(29896284-29896362)
chr2 (142-215)||(27412826-27412899)
chr2 (138-184)||(13922653-13922699)
chr2 (138-188)||(28825111-28825161)
chr2 (142-215)||(30243248-30243321)
chr2 (138-211)||(40967365-40967438)
chr2 (139-183)||(22608522-22608566)
chr2 (147-215)||(25395432-25395500)
chr2 (144-188)||(30799105-30799149)
chr2 (139-215)||(41311979-41312055)
chr2 (163-215)||(43305899-43305951)
[»] chr5 (15 HSPs)
chr5 (1-65)||(6217998-6218062)
chr5 (150-190)||(11666009-11666049)
chr5 (134-202)||(30488915-30488983)
chr5 (137-202)||(5739100-5739165)
chr5 (134-199)||(15105116-15105181)
chr5 (142-215)||(26675936-26676009)
chr5 (142-215)||(26947544-26947617)
chr5 (134-214)||(20365464-20365543)
chr5 (136-183)||(13150875-13150922)
chr5 (137-215)||(10199012-10199090)
chr5 (138-212)||(26722911-26722985)
chr5 (138-212)||(26992660-26992734)
chr5 (137-183)||(33654741-33654787)
chr5 (139-188)||(42515802-42515851)
chr5 (142-190)||(43359088-43359136)
[»] chr4 (15 HSPs)
chr4 (147-215)||(34960147-34960215)
chr4 (142-214)||(50380827-50380899)
chr4 (144-202)||(52936641-52936699)
chr4 (142-183)||(45970729-45970770)
chr4 (138-193)||(27392648-27392703)
chr4 (136-183)||(44221439-44221486)
chr4 (142-188)||(17134123-17134169)
chr4 (137-187)||(19283960-19284010)
chr4 (137-183)||(31041387-31041433)
chr4 (137-183)||(37970196-37970242)
chr4 (142-215)||(10082400-10082473)
chr4 (138-183)||(40070990-40071035)
chr4 (143-183)||(13984664-13984704)
chr4 (142-214)||(14197422-14197494)
chr4 (134-190)||(47537461-47537517)
[»] chr3 (12 HSPs)
chr3 (134-206)||(7938714-7938786)
chr3 (142-215)||(29791774-29791847)
chr3 (139-206)||(18737103-18737170)
chr3 (137-183)||(1757691-1757737)
chr3 (145-215)||(38234928-38234997)
chr3 (142-215)||(7464481-7464554)
chr3 (143-212)||(22486682-22486751)
chr3 (138-215)||(32928578-32928654)
chr3 (142-183)||(33223866-33223907)
chr3 (142-199)||(45309149-45309206)
chr3 (137-202)||(47377352-47377417)
chr3 (142-202)||(2078238-2078298)
[»] scaffold0197 (1 HSPs)
scaffold0197 (142-215)||(21745-21818)
[»] scaffold0086 (1 HSPs)
scaffold0086 (137-214)||(19046-19123)
[»] chr6 (6 HSPs)
chr6 (142-191)||(5632132-5632181)
chr6 (155-202)||(29457192-29457239)
chr6 (142-212)||(331879-331949)
chr6 (142-212)||(9311923-9311993)
chr6 (142-211)||(1989037-1989105)
chr6 (130-183)||(29335597-29335650)
[»] scaffold0122 (1 HSPs)
scaffold0122 (142-215)||(14176-14249)
[»] scaffold0003 (1 HSPs)
scaffold0003 (142-187)||(349625-349670)
[»] scaffold1063 (1 HSPs)
scaffold1063 (136-188)||(1077-1129)
[»] scaffold0012 (1 HSPs)
scaffold0012 (137-173)||(240287-240323)


Alignment Details
Target: chr1 (Bit Score: 176; Significance: 1e-94; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 337 - 532
Target Start/End: Original strand, 51989075 - 51989270
Alignment:
Q  337 acagactatatacaataattgtactagaaaaataatcaaaactcttcatatagcaataggtcttattttttcctccaaacaacatttaacttggtcaccg 436  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||| |||||||    
T  51989075 acagactatatacaataattgtactagaaaaataatcaaaactcttcagatagcaataggtcttttttttccctccaaacaacatttaacttagtcaccg 51989174  T
Q  437 taaaagtttgatggccaaattaattacacgtaatatttcaaatcaaattattataggaagcataacttttgttttgttttccttgctattttaccc 532  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  51989175 taaaagtttgatggccaaattaattacacgtaatatttcaaatcaaataattataggaagcataacttttgttttgttttccttgctattttaccc 51989270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 51988631 - 51988899
Alignment:
Q  1 tgaagccactaataaacctcgtgccatacactgtcaaatatgtcacatcagaagagaagatgacttgt-------gtacacccacatccacctatgctat 93  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||| ||||| ||||||||||||       |||||||||||||||||||||||||    
T  51988631 tgaagccactaataaaccccgtgccatacactgccaaatatgtcacatcggaagataagatgacttgtcatttctgtacacccacatccacctatgctat 51988730  T
Q  94 aaaatgttaaattaatatcaatcttctagttacttaaaagaaatgtcatcgtgagcttaattcagttggtagaaacaatgaataatatatataagatttg 193  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||  |||||||||| ||||||| | ||||||  ||||||| |    
T  51988731 aaaatgttaaattaatatcaatcttctagttacttaaaagaagtgtcatcgtgaacttaacacagttggtaggaacaatgcacaatataggtaagattcg 51988830  T
Q  194 tggttcaaatctcgaccaccacgnnnnnnncctactcaaaaacaaattcatcaatcaagttttatattg 262  Q
     | ||||||||||||||||||||       ||||||  |||||||||||||||||||||||||||||||    
T  51988831 ggattcaaatctcgaccaccacgaaaaaaacctacttgaaaacaaattcatcaatcaagttttatattg 51988899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 143 - 211
Target Start/End: Complemental strand, 4806857 - 4806789
Alignment:
Q  143 cgtgagcttaattcagttggtagaaacaatgaataatatatataagatttgtggttcaaatctcgacca 211  Q
    ||||| |||||||||||||||||| |||||| ||||||||| |||| |||| |||||||| ||||||||    
T  4806857 cgtgaacttaattcagttggtagagacaatgtataatatatgtaaggtttgaggttcaaacctcgacca 4806789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 137 - 215
Target Start/End: Original strand, 16924471 - 16924549
Alignment:
Q  137 tgtcatcgtgagcttaattcagttggtagaaacaatgaataatatatataagatttgtggttcaaatctcgaccaccac 215  Q
    |||| |||||||||||| ||||| ||| || |||||  ||||||||| ||||||||| |||||||| ||||||||||||    
T  16924471 tgtcctcgtgagcttaactcagtcggtggagacaatacataatatatgtaagatttggggttcaaacctcgaccaccac 16924549  T

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Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 300
Target Start/End: Original strand, 51989000 - 51989036
Alignment:
Q  264 aaaatactactttctcacgaagtgaatgtcataatag 300  Q
    |||||||||||||||||||||||||||||||||||||    
T  51989000 aaaatactactttctcacgaagtgaatgtcataatag 51989036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 145 - 202
Target Start/End: Complemental strand, 43284090 - 43284033
Alignment:
Q  145 tgagcttaattcagttggtagaaacaatgaataatatatataagatttgtggttcaaa 202  Q
    ||||||||| |||||| ||||| |||||| ||||||||| |||| |||||||||||||    
T  43284090 tgagcttaactcagttagtagagacaatgtataatatatgtaaggtttgtggttcaaa 43284033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 142 - 193
Target Start/End: Complemental strand, 3573387 - 3573336
Alignment:
Q  142 tcgtgagcttaattcagttggtagaaacaatgaataatatatataagatttg 193  Q
    |||||||||||| ||||||||||| ||||||| ||||||||| |||| ||||    
T  3573387 tcgtgagcttaactcagttggtaggaacaatgcataatatatgtaaggtttg 3573336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 129 - 184
Target Start/End: Original strand, 26086914 - 26086969
Alignment:
Q  129 aaaagaaatgtcatcgtgagcttaattcagttggtagaaacaatgaataatatata 184  Q
    |||||||||||| |||||||||||| ||||||||||  | ||||| ||||||||||    
T  26086914 aaaagaaatgtcctcgtgagcttaactcagttggtatgatcaatgcataatatata 26086969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 215
Target Start/End: Complemental strand, 30678882 - 30678803
Alignment:
Q  136 atgtcatcgtgagcttaattcagttggtagaaacaatgaataatatatataagatttgtggttcaaatctcgaccaccac 215  Q
    ||||| |||||||||||| |||||||||||  |||||| ||||||||| |||| ||  |||||||||  ||| |||||||    
T  30678882 atgtcctcgtgagcttaactcagttggtagggacaatgcataatatatgtaaggttcatggttcaaacttcggccaccac 30678803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 137 - 207
Target Start/End: Complemental strand, 7996756 - 7996687
Alignment:
Q  137 tgtcatcgtgagcttaattcagttggtagaaacaatgaataatatatataagatttgtggttcaaatctcg 207  Q
    |||||||||||| |||||||| | ||||||||||||| ||||||||| |||  |||| |||||||| ||||    
T  7996756 tgtcatcgtgagattaattcaat-ggtagaaacaatgcataatatatgtaaagtttgaggttcaaacctcg 7996687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 12269052 - 12269006
Alignment:
Q  137 tgtcatcgtgagcttaattcagttggtagaaacaatgaataatatat 183  Q
    |||||||| |||||||| ||||||||||| ||||||| |||||||||    
T  12269052 tgtcatcgcgagcttaagtcagttggtaggaacaatgcataatatat 12269006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 15729423 - 15729469
Alignment:
Q  137 tgtcatcgtgagcttaattcagttggtagaaacaatgaataatatat 183  Q
    |||| |||||||||||| |||||||||||| |||||| |||||||||    
T  15729423 tgtcctcgtgagcttaactcagttggtagagacaatgcataatatat 15729469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 24978238 - 24978315
Alignment:
Q  138 gtcatcgtgagcttaattcagttggtagaaacaatgaataatatatataagatttgtggttcaaatctcgaccaccac 215  Q
    |||||||||||||||| |||||||||| | | |||  |||||||||  ||| |||  |||||||||| ||||||||||    
T  24978238 gtcatcgtgagcttaactcagttggtatagataatacataatatatgcaaggtttagggttcaaatcccgaccaccac 24978315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 190
Target Start/End: Complemental strand, 29059465 - 29059420
Alignment:
Q  145 tgagcttaattcagttggtagaaacaatgaataatatatataagat 190  Q
    ||||||||||||||||||||  || |||| ||||||||||||||||    
T  29059465 tgagcttaattcagttggtaagaataatgcataatatatataagat 29059420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 202
Target Start/End: Original strand, 35308178 - 35308243
Alignment:
Q  137 tgtcatcgtgagcttaattcagttggtagaaacaatgaataatatatataagatttgtggttcaaa 202  Q
    |||| ||||||||||| |||||||||||  ||||||| |||||||||| || || || ||||||||    
T  35308178 tgtcctcgtgagcttagttcagttggtatgaacaatgcataatatatacaaaatctggggttcaaa 35308243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 136 - 192
Target Start/End: Original strand, 15973025 - 15973081
Alignment:
Q  136 atgtcatcgtgagcttaattcagttggtagaaacaatgaataatatatataagattt 192  Q
    ||||||||||||| |||  |||||||||| ||| |||| |||||||||| |||||||    
T  15973025 atgtcatcgtgaggttagctcagttggtaaaaataatgtataatatatacaagattt 15973081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 154 - 190
Target Start/End: Complemental strand, 26861175 - 26861139
Alignment:
Q  154 ttcagttggtagaaacaatgaataatatatataagat 190  Q
    ||||||||||||| |||||| ||||||||||||||||    
T  26861175 ttcagttggtagagacaatgcataatatatataagat 26861139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 142 - 190
Target Start/End: Original strand, 27853353 - 27853401
Alignment:
Q  142 tcgtgagcttaattcagttggtagaaacaatgaataatatatataagat 190  Q
    |||||||||||| ||||||||||  ||||||| |||||||||| |||||    
T  27853353 tcgtgagcttaactcagttggtatgaacaatgcataatatatacaagat 27853401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 32826774 - 32826722
Alignment:
Q  136 atgtcatcgtgagcttaattcagttggtagaaacaatgaataatatatataag 188  Q
    |||||||||| |||||| ||||||||||| ||| |||| ||||||||| ||||    
T  32826774 atgtcatcgttagcttagttcagttggtaaaaataatgcataatatatgtaag 32826722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 143 - 183
Target Start/End: Complemental strand, 32950823 - 32950783
Alignment:
Q  143 cgtgagcttaattcagttggtagaaacaatgaataatatat 183  Q
    ||||||||||| |||||||||| |||||||| |||||||||    
T  32950823 cgtgagcttaactcagttggtataaacaatgcataatatat 32950783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 9e-19; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 6744171 - 6744107
Alignment:
Q  1 tgaagccactaataaacctcgtgccatacactgtcaaatatgtcacatcagaagagaagatgact 65  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||||| ||| |||||||||||    
T  6744171 tgaagccactaataaacctcgtgccatacactgccaaagatgtcacatcggaaaagaagatgact 6744107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 6654433 - 6654369
Alignment:
Q  1 tgaagccactaataaacctcgtgccatacactgtcaaatatgtcacatcagaagagaagatgact 65  Q
    |||||||||||||||||||||||||||||| || |||| |||||||||| ||| |||||||||||    
T  6654433 tgaagccactaataaacctcgtgccatacagtgccaaagatgtcacatcggaaaagaagatgact 6654369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 6734835 - 6734771
Alignment:
Q  1 tgaagccactaataaacctcgtgccatacactgtcaaatatgtcacatcagaagagaagatgact 65  Q
    |||||||||||||||||||||||||||||| || |||| |||||||||| ||| |||||||||||    
T  6734835 tgaagccactaataaacctcgtgccatacaatgccaaagatgtcacatcggaaaagaagatgact 6734771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 3650514 - 3650591
Alignment:
Q  138 gtcatcgtgagcttaattcagttggtagaaacaatgaataatatatataagatttgtggttcaaatctcgaccaccac 215  Q
    |||||||||||||||| |||||||||||||| |||| ||||||||| |||| || | |||||||| | || |||||||    
T  3650514 gtcatcgtgagcttaactcagttggtagaaaaaatgcataatatatgtaaggttcggggttcaaaccccggccaccac 3650591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 137 - 184
Target Start/End: Complemental strand, 5448498 - 5448451
Alignment:
Q  137 tgtcatcgtgagcttaattcagttggtagaaacaatgaataatatata 184  Q
    ||||||||||||||||||||||||||| ||||||||| |||| |||||    
T  5448498 tgtcatcgtgagcttaattcagttggttgaaacaatgcataaaatata 5448451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 138 - 183
Target Start/End: Complemental strand, 42541914 - 42541869
Alignment:
Q  138 gtcatcgtgagcttaattcagttggtagaaacaatgaataatatat 183  Q
    ||||||||||||||||||||||| |||||||||||  |||||||||    
T  42541914 gtcatcgtgagcttaattcagttagtagaaacaatatataatatat 42541869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 137 - 215
Target Start/End: Complemental strand, 1230729 - 1230651
Alignment:
Q  137 tgtcatcgtgagcttaattcagttggtagaaacaatgaataatatatataagatttgtggttcaaatctcgaccaccac 215  Q
    |||| ||| ||| |||| ||||||||||| ||||||| ||||||||| |||| |||| |||||||| |||  |||||||    
T  1230729 tgtcctcgcgagtttaactcagttggtaggaacaatgcataatatatgtaaggtttgaggttcaaaactcagccaccac 1230651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 1243809 - 1243763
Alignment:
Q  137 tgtcatcgtgagcttaattcagttggtagaaacaatgaataatatat 183  Q
    |||| ||||||| ||||||||||| |||||||||||| |||||||||    
T  1243809 tgtcctcgtgagtttaattcagtttgtagaaacaatgcataatatat 1243763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 1254509 - 1254463
Alignment:
Q  137 tgtcatcgtgagcttaattcagttggtagaaacaatgaataatatat 183  Q
    |||| ||||||| ||||||||||| |||||||||||| |||||||||    
T  1254509 tgtcctcgtgagtttaattcagtttgtagaaacaatgcataatatat 1254463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 142 - 188
Target Start/End: Original strand, 9639996 - 9640042
Alignment:
Q  142 tcgtgagcttaattcagttggtagaaacaatgaataatatatataag 188  Q
    |||||||||||| ||||||| ||||||||| ||||||||||| ||||    
T  9639996 tcgtgagcttaactcagttgttagaaacaacgaataatatatgtaag 9640042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 142 - 188
Target Start/End: Complemental strand, 18422516 - 18422470
Alignment:
Q  142 tcgtgagcttaattcagttggtagaaacaatgaataatatatataag 188  Q
    |||| ||||||||||||||| ||||||||||| ||||||||| ||||    
T  18422516 tcgtaagcttaattcagttgatagaaacaatgcataatatatgtaag 18422470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 29716768 - 29716722
Alignment:
Q  137 tgtcatcgtgagcttaattcagttggtagaaacaatgaataatatat 183  Q
    ||||||||||||||||| ||||||||||| ||||||  |||||||||    
T  29716768 tgtcatcgtgagcttaactcagttggtaggaacaattcataatatat 29716722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 28084280 - 28084321
Alignment:
Q  142 tcgtgagcttaattcagttggtagaaacaatgaataatatat 183  Q
    |||||||||||| ||||||| |||| ||||||||||||||||    
T  28084280 tcgtgagcttaactcagttgatagagacaatgaataatatat 28084321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 209
Target Start/End: Original strand, 40574757 - 40574830
Alignment:
Q  136 atgtcatcgtgagcttaattcagttggtagaaacaatgaataatatatataagatttgtggttcaaatctcgac 209  Q
    ||||| |||||||||||| |||| | ||| ||| || ||||||||||| ||||||| |  ||||||||||||||    
T  40574757 atgtcctcgtgagcttaactcagctagtataaataaagaataatatatgtaagattcgaagttcaaatctcgac 40574830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 33445563 - 33445619
Alignment:
Q  137 tgtcatcgtgagcttaattcagttggtagaaacaatgaataatatatataagatttg 193  Q
    |||| |||||||||||  ||||||||||| ||||||| |||||||||| ||| ||||    
T  33445563 tgtcctcgtgagcttagctcagttggtaggaacaatgcataatatatacaaggtttg 33445619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 138 - 182
Target Start/End: Original strand, 43910898 - 43910942
Alignment:
Q  138 gtcatcgtgagcttaattcagttggtagaaacaatgaataatata 182  Q
    |||||||||||||||| |||||||||||  |||||| ||||||||    
T  43910898 gtcatcgtgagcttaactcagttggtagcgacaatgcataatata 43910942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 143 - 202
Target Start/End: Original strand, 25251509 - 25251568
Alignment:
Q  143 cgtgagcttaattcagttggtagaaacaatgaataatatatataagatttgtggttcaaa 202  Q
    ||||||||||| |||||||||| |||||||| |||||||||||||| |||| ||||||||    
T  25251509 cgtgagcttaactcagttggtataaacaatgcataatatatataaggtttggggttcaaa 25251568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 134 - 190
Target Start/End: Complemental strand, 964812 - 964756
Alignment:
Q  134 aaatgtcatcgtgagcttaattcagttggtagaaacaatgaataatatatataagat 190  Q
    ||||||| |||||||||||| ||||| | ||||||||||| ||||||||||||||||    
T  964812 aaatgtcctcgtgagcttaactcagtcgatagaaacaatgcataatatatataagat 964756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 142 - 214
Target Start/End: Original strand, 5526723 - 5526795
Alignment:
Q  142 tcgtgagcttaattcagttggtagaaacaatgaataatatatataagatttgtggttcaaatctcgaccacca 214  Q
    |||||||||||  ||||||||||   |||||| ||||||||||||||||||| |||||||| | |||||||||    
T  5526723 tcgtgagcttagctcagttggtatggacaatgcataatatatataagatttggggttcaaaccccgaccacca 5526795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 150 - 202
Target Start/End: Original strand, 19815738 - 19815790
Alignment:
Q  150 ttaattcagttggtagaaacaatgaataatatatataagatttgtggttcaaa 202  Q
    |||||||| |||||||||| |||| ||||||||||||||||||| ||||||||    
T  19815738 ttaattcaattggtagaaaaaatgcataatatatataagatttggggttcaaa 19815790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 135 - 202
Target Start/End: Original strand, 23221383 - 23221450
Alignment:
Q  135 aatgtcatcgtgagcttaattcagttggtagaaacaatgaataatatatataagatttgtggttcaaa 202  Q
    |||||||  |||||||||| |||||||||||| |||||| ||||||||| |||| || ||||||||||    
T  23221383 aatgtcactgtgagcttaactcagttggtagagacaatgcataatatatgtaaggttcgtggttcaaa 23221450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 214
Target Start/End: Original strand, 38779980 - 38780050
Alignment:
Q  144 gtgagcttaattcagttggtagaaacaatgaataatatatataagatttgtggttcaaatctcgaccacca 214  Q
    |||||||||| ||||||||||| |||||| |||||||||| |||| |||| | |||||| | |||||||||    
T  38779980 gtgagcttaactcagttggtaggaacaataaataatatatgtaaggtttgggattcaaaccccgaccacca 38780050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 38432620 - 38432557
Alignment:
Q  1 tgaagccactaataaacctcgtgccatacactgtcaaatatgtcacatcagaagagaagatgact 65  Q
    |||||||||| ||||||| |||||||||||| | |||| |||||||||| ||| |||||||||||    
T  38432620 tgaagccactgataaaccccgtgccatacac-gccaaagatgtcacatcggaaaagaagatgact 38432557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 136 - 202
Target Start/End: Complemental strand, 5435630 - 5435564
Alignment:
Q  136 atgtcatcgtgagcttaattcagttggtagaaacaatgaataatatatataagatttgtggttcaaa 202  Q
    |||||||| |||||||| || |||| ||||||||||||  |||||||| |||||| || ||||||||    
T  5435630 atgtcatcatgagcttactttagttagtagaaacaatgcgtaatatatgtaagatctggggttcaaa 5435564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 137 - 191
Target Start/End: Original strand, 22267574 - 22267628
Alignment:
Q  137 tgtcatcgtgagcttaattcagttggtagaaacaatgaataatatatataagatt 191  Q
    |||| ||||||| |||| |||||||||||| |||||| ||||||||| |||||||    
T  22267574 tgtcctcgtgagtttaactcagttggtagagacaatgcataatatatgtaagatt 22267628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 28200453 - 28200407
Alignment:
Q  137 tgtcatcgtgagcttaattcagttggtagaaacaatgaataatatat 183  Q
    ||||||||||||||||| ||||||||||| ||||||  |||||||||    
T  28200453 tgtcatcgtgagcttaactcagttggtaggaacaatacataatatat 28200407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 136 - 186
Target Start/End: Complemental strand, 35523149 - 35523099
Alignment:
Q  136 atgtcatcgtgagcttaattcagttggtagaaacaatgaataatatatata 186  Q
    ||||| || ||||||||||||||||| || |||||||| ||||||||||||    
T  35523149 atgtcctcatgagcttaattcagttgatataaacaatgtataatatatata 35523099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 215
Target Start/End: Complemental strand, 2703492 - 2703447
Alignment:
Q  170 aatgaataatatatataagatttgtggttcaaatctcgaccaccac 215  Q
    |||| ||||||||||||||||||| |||||||| | ||||||||||    
T  2703492 aatgcataatatatataagatttgaggttcaaaccccgaccaccac 2703447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 212
Target Start/End: Original strand, 35836030 - 35836087
Alignment:
Q  155 tcagttggtagaaacaatgaataatatatataagatttgtggttcaaatctcgaccac 212  Q
    ||||||| |||| |||||| ||| ||||||||||||||| ||||||||| ||| ||||    
T  35836030 tcagttgatagagacaatgcatagtatatataagatttgaggttcaaatttcggccac 35836087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 142 - 202
Target Start/End: Original strand, 23177940 - 23178000
Alignment:
Q  142 tcgtgagcttaattcagttggtagaaacaatgaataatatatataagatttgtggttcaaa 202  Q
    ||||||||||||||| |||| || ||| |||| |||||||||| ||| || ||||||||||    
T  23177940 tcgtgagcttaattcggttgatataaataatgtataatatatacaaggttagtggttcaaa 23178000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 137 - 215
Target Start/End: Complemental strand, 29896362 - 29896284
Alignment:
Q  137 tgtcatcgtgagcttaattcagttggtagaaacaatgaataatatatataagatttgtggttcaaatctcgaccaccac 215  Q
    |||| ||||||| |||||||||||| ||||||||||| |||||||||  ||| |||| |||||||| | ||||||||||    
T  29896362 tgtcctcgtgagtttaattcagttgatagaaacaatgcataatatatgcaaggtttggggttcaaaccccgaccaccac 29896284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 142 - 215
Target Start/End: Complemental strand, 27412899 - 27412826
Alignment:
Q  142 tcgtgagcttaattcagttggtagaaacaatgaataatatatataagatttgtggttcaaatctcgaccaccac 215  Q
    |||||||||||| |||||||||||| |||||| ||||||||| |||| | ||| ||||||| | ||||||||||    
T  27412899 tcgtgagcttaactcagttggtagagacaatgcataatatatgtaaggtctgttgttcaaaccccgaccaccac 27412826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 138 - 184
Target Start/End: Complemental strand, 13922699 - 13922653
Alignment:
Q  138 gtcatcgtgagcttaattcagttggtagaaacaatgaataatatata 184  Q
    |||||||||||||||| |||||||||||  |||||| ||||||||||    
T  13922699 gtcatcgtgagcttaactcagttggtagggacaatgcataatatata 13922653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 138 - 188
Target Start/End: Complemental strand, 28825161 - 28825111
Alignment:
Q  138 gtcatcgtgagcttaattcagttggtagaaacaatgaataatatatataag 188  Q
    |||||||||||||||| ||| ||| |||||||||||  |||||||||||||    
T  28825161 gtcatcgtgagcttaactcaattgatagaaacaatgcttaatatatataag 28825111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 142 - 215
Target Start/End: Original strand, 30243248 - 30243321
Alignment:
Q  142 tcgtgagcttaattcagttggtagaaacaatgaataatatatataagatttgtggttcaaatctcgaccaccac 215  Q
    |||||| ||||  |||||||||||| |||||| |||||||||| ||| || | |||||||| |||| |||||||    
T  30243248 tcgtgaacttagctcagttggtagagacaatgcataatatatacaaggttcggggttcaaacctcggccaccac 30243321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 138 - 211
Target Start/End: Complemental strand, 40967438 - 40967365
Alignment:
Q  138 gtcatcgtgagcttaattcagttggtagaaacaatgaataatatatataagatttgtggttcaaatctcgacca 211  Q
    |||||||||||||||| ||||||| ||   |||||| |||||||||  ||| |||| |||||||| ||||||||    
T  40967438 gtcatcgtgagcttaactcagttgataaggacaatgcataatatatgcaaggtttgaggttcaaacctcgacca 40967365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 22608522 - 22608566
Alignment:
Q  139 tcatcgtgagcttaattcagttggtagaaacaatgaataatatat 183  Q
    ||||||||||||||  |||||||||||| |||||| |||||||||    
T  22608522 tcatcgtgagcttagctcagttggtagagacaatgcataatatat 22608566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 147 - 215
Target Start/End: Complemental strand, 25395500 - 25395432
Alignment:
Q  147 agcttaattcagttggtagaaacaatgaataatatatataagatttgtggttcaaatctcgaccaccac 215  Q
    ||||||| ||||||||||| ||||||| |||||||||  ||| ||   |||||||||| ||||||||||    
T  25395500 agcttaactcagttggtaggaacaatgcataatatatgcaaggttcaaggttcaaatcccgaccaccac 25395432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 144 - 188
Target Start/End: Complemental strand, 30799149 - 30799105
Alignment:
Q  144 gtgagcttaattcagttggtagaaacaatgaataatatatataag 188  Q
    |||| |||| |||||||||||||||||||| ||||||||| ||||    
T  30799149 gtgaacttatttcagttggtagaaacaatgcataatatatgtaag 30799105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 139 - 215
Target Start/End: Original strand, 41311979 - 41312055
Alignment:
Q  139 tcatcgtgagcttaattcagttggtagaaacaatgaataatatatataagatttgtggttcaaatctcgaccaccac 215  Q
    |||| ||||||||| ||||||| | ||  |||||| |||||||||  ||||||||||||||||| |  |||||||||    
T  41311979 tcattgtgagcttagttcagttagcagggacaatgcataatatatgcaagatttgtggttcaaaccatgaccaccac 41312055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 163 - 215
Target Start/End: Complemental strand, 43305951 - 43305899
Alignment:
Q  163 tagaaacaatgaataatatatataagatttgtggttcaaatctcgaccaccac 215  Q
    ||||||||||| |||||||||||||| || | ||||||||  |||||||||||    
T  43305951 tagaaacaatgtataatatatataaggttcgaggttcaaacttcgaccaccac 43305899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.00000000001; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 6218062 - 6217998
Alignment:
Q  1 tgaagccactaataaacctcgtgccatacactgtcaaatatgtcacatcagaagagaagatgact 65  Q
    |||||||||| ||||||| |||||||||||||| |||| |||||||||  ||| |||||||||||    
T  6218062 tgaagccactgataaaccccgtgccatacactgccaaagatgtcacattggaaaagaagatgact 6217998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 150 - 190
Target Start/End: Original strand, 11666009 - 11666049
Alignment:
Q  150 ttaattcagttggtagaaacaatgaataatatatataagat 190  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  11666009 ttaattcagttggtagaaacaatgcataatatatataagat 11666049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 134 - 202
Target Start/End: Original strand, 30488915 - 30488983
Alignment:
Q  134 aaatgtcatcgtgagcttaattcagttggtagaaacaatgaataatatatataagatttgtggttcaaa 202  Q
    ||||||||||||||||||| |||||||| ||  ||||||| |||||||||| ||| |||| ||||||||    
T  30488915 aaatgtcatcgtgagcttagttcagttgatatgaacaatgcataatatatacaaggtttggggttcaaa 30488983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 137 - 202
Target Start/End: Complemental strand, 5739165 - 5739100
Alignment:
Q  137 tgtcatcgtgagcttaattcagttggtagaaacaatgaataatatatataagatttgtggttcaaa 202  Q
    |||| |||| ||||||| ||||||||||| ||||||| || |||||| |||||| |||||||||||    
T  5739165 tgtcctcgtcagcttaactcagttggtaggaacaatgcattatatatgtaagatatgtggttcaaa 5739100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 134 - 199
Target Start/End: Complemental strand, 15105181 - 15105116
Alignment:
Q  134 aaatgtcatcgtgagcttaattcagttggtagaaacaatgaataatatatataagatttgtggttc 199  Q
    ||||||||| ||| | |||| |||||||||| |||||||| |||||||||||||| |||| |||||    
T  15105181 aaatgtcatagtgcgtttaactcagttggtaaaaacaatgcataatatatataaggtttggggttc 15105116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 142 - 215
Target Start/End: Complemental strand, 26676009 - 26675936
Alignment:
Q  142 tcgtgagcttaattcagttggtagaaacaatgaataatatatataagatttgtggttcaaatctcgaccaccac 215  Q
    |||||||||||||||| ||| ||| || |||  ||||||||| |||| ||||||||||| | ||||||||||||    
T  26676009 tcgtgagcttaattcaattgttaggaataatacataatatatgtaaggtttgtggttcacacctcgaccaccac 26675936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 142 - 215
Target Start/End: Complemental strand, 26947617 - 26947544
Alignment:
Q  142 tcgtgagcttaattcagttggtagaaacaatgaataatatatataagatttgtggttcaaatctcgaccaccac 215  Q
    |||||||||||||||| ||| ||| || |||  ||||||||| |||| ||||||||||| | ||||||||||||    
T  26947617 tcgtgagcttaattcaattgttaggaataatacataatatatgtaaggtttgtggttcacacctcgaccaccac 26947544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 134 - 214
Target Start/End: Complemental strand, 20365543 - 20365464
Alignment:
Q  134 aaatgtcatcgtgagcttaattcagttggtagaaacaatgaataatatatataagatttgtggttcaaatctcgaccacca 214  Q
    ||||||||||||||| |||  ||||||||| | ||||||| |||||||||| ||||| ||| ||||||||| || ||||||    
T  20365543 aaatgtcatcgtgagtttagctcagttggtcggaacaatgcataatatatacaagatctgt-gttcaaatcccggccacca 20365464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 13150922 - 13150875
Alignment:
Q  136 atgtcatcgtgagcttaattcagttggtagaaacaatgaataatatat 183  Q
    |||| ||||| | ||||||||||||||||||||||||| |||||||||    
T  13150922 atgttatcgtaatcttaattcagttggtagaaacaatgcataatatat 13150875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 137 - 215
Target Start/End: Original strand, 10199012 - 10199090
Alignment:
Q  137 tgtcatcgtgagcttaattcagttggtagaaacaatgaataatatatataagatttgtggttcaaatctcgaccaccac 215  Q
    |||| |||||||||||  ||||||||||   |||||| |||||||||||||| | || ||||| |||| ||||||||||    
T  10199012 tgtcctcgtgagcttagctcagttggtatggacaatgcataatatatataaggtgtggggttcgaatcccgaccaccac 10199090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 138 - 212
Target Start/End: Original strand, 26722911 - 26722985
Alignment:
Q  138 gtcatcgtgagcttaattcagttggtagaaacaatgaataatatatataagatttgtggttcaaatctcgaccac 212  Q
    ||||||||||| |||| ||||||| ||   |||||| |||||||||| ||| |||||||||| |||| |||||||    
T  26722911 gtcatcgtgagtttaactcagttgttatgtacaatgcataatatatagaaggtttgtggttcgaatcccgaccac 26722985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 138 - 212
Target Start/End: Original strand, 26992660 - 26992734
Alignment:
Q  138 gtcatcgtgagcttaattcagttggtagaaacaatgaataatatatataagatttgtggttcaaatctcgaccac 212  Q
    ||||||||||| |||| ||||||| ||   |||||| |||||||||| ||| |||||||||| |||| |||||||    
T  26992660 gtcatcgtgagtttaactcagttgttatgtacaatgcataatatatagaaggtttgtggttcgaatcccgaccac 26992734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 33654741 - 33654787
Alignment:
Q  137 tgtcatcgtgagcttaattcagttggtagaaacaatgaataatatat 183  Q
    ||||||||||||||||| |||||||||||  |||||| |||||||||    
T  33654741 tgtcatcgtgagcttaactcagttggtagggacaatgcataatatat 33654787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 139 - 188
Target Start/End: Original strand, 42515802 - 42515851
Alignment:
Q  139 tcatcgtgagcttaattcagttggtagaaacaatgaataatatatataag 188  Q
    ||||||||||||||||||||||||||   |||||| ||||||||| ||||    
T  42515802 tcatcgtgagcttaattcagttggtatggacaatgcataatatatgtaag 42515851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 142 - 190
Target Start/End: Complemental strand, 43359136 - 43359088
Alignment:
Q  142 tcgtgagcttaattcagttggtagaaacaatgaataatatatataagat 190  Q
    |||||| |||| || ||||||||||||||||| |||||||||| |||||    
T  43359136 tcgtgaacttagtttagttggtagaaacaatgtataatatatacaagat 43359088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.00000000001; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 147 - 215
Target Start/End: Complemental strand, 34960215 - 34960147
Alignment:
Q  147 agcttaattcagttggtagaaacaatgaataatatatataagatttgtggttcaaatctcgaccaccac 215  Q
    ||||||| |||||||||| |||||||| ||||||||||||||||| | ||||| || | ||||||||||    
T  34960215 agcttaactcagttggtataaacaatgcataatatatataagattcgaggttcgaaccccgaccaccac 34960147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 142 - 214
Target Start/End: Complemental strand, 50380899 - 50380827
Alignment:
Q  142 tcgtgagcttaattcagttggtagaaacaatgaataatatatataagatttgtggttcaaatctcgaccacca 214  Q
    |||||||||||||||||||||||  ||||||| ||||||||| |||| |  |  |||||||||||||||||||    
T  50380899 tcgtgagcttaattcagttggtatgaacaatgcataatatatgtaaggtccggagttcaaatctcgaccacca 50380827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 52936641 - 52936699
Alignment:
Q  144 gtgagcttaattcagttggtagaaacaatgaataatatatataagatttgtggttcaaa 202  Q
    |||||||||| ||||||| ||||||||||| ||||||||| |||| |||| ||||||||    
T  52936641 gtgagcttaactcagttgatagaaacaatgtataatatatgtaaggtttgaggttcaaa 52936699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 142 - 183
Target Start/End: Complemental strand, 45970770 - 45970729
Alignment:
Q  142 tcgtgagcttaattcagttggtagaaacaatgaataatatat 183  Q
    |||||||||||| ||||||||||||||||||| |||||||||    
T  45970770 tcgtgagcttaactcagttggtagaaacaatgcataatatat 45970729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 27392648 - 27392703
Alignment:
Q  138 gtcatcgtgagcttaattcagttggtagaaacaatgaataatatatataagatttg 193  Q
    ||||||||||||||| ||||| ||||||| ||| || |||||||||| ||||||||    
T  27392648 gtcatcgtgagcttagttcagatggtagagacattgcataatatatacaagatttg 27392703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 44221439 - 44221486
Alignment:
Q  136 atgtcatcgtgagcttaattcagttggtagaaacaatgaataatatat 183  Q
    |||||||||||||||||||||||||||||   |||||| |||||||||    
T  44221439 atgtcatcgtgagcttaattcagttggtatggacaatgcataatatat 44221486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 142 - 188
Target Start/End: Original strand, 17134123 - 17134169
Alignment:
Q  142 tcgtgagcttaattcagttggtagaaacaatgaataatatatataag 188  Q
    |||||||||||| ||| |||||||| |||||| ||||||||||||||    
T  17134123 tcgtgagcttaactcaattggtagagacaatgcataatatatataag 17134169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 137 - 187
Target Start/End: Complemental strand, 19284010 - 19283960
Alignment:
Q  137 tgtcatcgtgagcttaattcagttggtagaaacaatgaataatatatataa 187  Q
    |||| ||||||||||||||||||||||| |||||||  |||| ||||||||    
T  19284010 tgtcctcgtgagcttaattcagttggtataaacaatacataaaatatataa 19283960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 31041433 - 31041387
Alignment:
Q  137 tgtcatcgtgagcttaattcagttggtagaaacaatgaataatatat 183  Q
    |||| |||||||||||| ||| ||||||||||||||| |||||||||    
T  31041433 tgtcctcgtgagcttaactcatttggtagaaacaatgtataatatat 31041387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 37970242 - 37970196
Alignment:
Q  137 tgtcatcgtgagcttaattcagttggtagaaacaatgaataatatat 183  Q
    ||||||||||| |||||||||||||||| ||| |||| |||||||||    
T  37970242 tgtcatcgtgaacttaattcagttggtataaaaaatgtataatatat 37970196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 142 - 215
Target Start/End: Original strand, 10082400 - 10082473
Alignment:
Q  142 tcgtgagcttaattcagttggtagaaacaatgaataatatatataagatttgtggttcaaatctcgaccaccac 215  Q
    |||||| ||||  |||||||||||  |||||  |||||||||| ||||| || |||||||| ||||||||||||    
T  10082400 tcgtgaacttagctcagttggtagggacaatacataatatatacaagatatgaggttcaaacctcgaccaccac 10082473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 138 - 183
Target Start/End: Complemental strand, 40071035 - 40070990
Alignment:
Q  138 gtcatcgtgagcttaattcagttggtagaaacaatgaataatatat 183  Q
    |||||||||||||||| ||||||||||  ||||||| |||||||||    
T  40071035 gtcatcgtgagcttaactcagttggtatgaacaatgcataatatat 40070990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 143 - 183
Target Start/End: Complemental strand, 13984704 - 13984664
Alignment:
Q  143 cgtgagcttaattcagttggtagaaacaatgaataatatat 183  Q
    ||||||||||| ||||||||||| ||||||| |||||||||    
T  13984704 cgtgagcttaactcagttggtaggaacaatgcataatatat 13984664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 142 - 214
Target Start/End: Complemental strand, 14197494 - 14197422
Alignment:
Q  142 tcgtgagcttaattcagttggtagaaacaatgaataatatatataagatttgtggttcaaatctcgaccacca 214  Q
    |||| ||||||| |||||||||||  |||||| ||||||||| ||||||  | |||||||| ||| |||||||    
T  14197494 tcgtaagcttaactcagttggtagggacaatgcataatatatgtaagatccggggttcaaacctcaaccacca 14197422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 134 - 190
Target Start/End: Complemental strand, 47537517 - 47537461
Alignment:
Q  134 aaatgtcatcgtgagcttaattcagttggtagaaacaatgaataatatatataagat 190  Q
    |||||||||||| | ||||| |||||||||| |||||||| |||| ||||| |||||    
T  47537517 aaatgtcatcgtaaacttaactcagttggtataaacaatgcataaaatatacaagat 47537461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.00000000001; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 134 - 206
Target Start/End: Original strand, 7938714 - 7938786
Alignment:
Q  134 aaatgtcatcgtgagcttaattcagttggtagaaacaatgaataatatatataagatttgtggttcaaatctc 206  Q
    ||||||||||||||||||| |||||||||||  ||||||| |||||||||| ||| | || ||||| ||||||    
T  7938714 aaatgtcatcgtgagcttagttcagttggtatgaacaatgcataatatatacaaggtctggggttcgaatctc 7938786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 142 - 215
Target Start/End: Original strand, 29791774 - 29791847
Alignment:
Q  142 tcgtgagcttaattcagttggtagaaacaatgaataatatatataagatttgtggttcaaatctcgaccaccac 215  Q
    ||||||| |||| ||||||| ||||||||||  ||||||||| |||| |||| ||||||||||| | |||||||    
T  29791774 tcgtgagtttaactcagttgatagaaacaatacataatatatgtaaggtttgaggttcaaatcttggccaccac 29791847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 139 - 206
Target Start/End: Original strand, 18737103 - 18737170
Alignment:
Q  139 tcatcgtgagcttaattcagttggtagaaacaatgaataatatatataagatttgtggttcaaatctc 206  Q
    ||||||||||||||| | ||||| || ||| |||| ||||||||| ||||||||| |||||| |||||    
T  18737103 tcatcgtgagcttaacttagttgatataaagaatgcataatatatgtaagatttggggttcagatctc 18737170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 1757737 - 1757691
Alignment:
Q  137 tgtcatcgtgagcttaattcagttggtagaaacaatgaataatatat 183  Q
    |||| |||||||||||| ||||||||||| ||||||| |||||||||    
T  1757737 tgtcctcgtgagcttaactcagttggtaggaacaatgcataatatat 1757691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 145 - 215
Target Start/End: Complemental strand, 38234997 - 38234928
Alignment:
Q  145 tgagcttaattcagttggtagaaacaatgaataatatatataagatttgtggttcaaatctcgaccaccac 215  Q
    ||||||||| ||||||||||||||||||  |||||||| ||||| | || |||||||| | ||||||||||    
T  38234997 tgagcttaactcagttggtagaaacaattcataatataaataaggtctg-ggttcaaaccccgaccaccac 38234928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 142 - 215
Target Start/End: Complemental strand, 7464554 - 7464481
Alignment:
Q  142 tcgtgagcttaattcagttggtagaaacaatgaataatatatataagatttgtggttcaaatctcgaccaccac 215  Q
    |||||||||||| |||||||||||  |||||| ||||||||| |||| |  | |||||||| | ||||||||||    
T  7464554 tcgtgagcttaactcagttggtagggacaatgcataatatatgtaaggtccggggttcaaaccccgaccaccac 7464481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 22486682 - 22486751
Alignment:
Q  143 cgtgagcttaattcagttggtagaaacaatgaataatatatataagatttgtggttcaaatctcgaccac 212  Q
    ||||||||||| ||||||||||  ||||||| |||||||||  |||||||| ||||| ||| ||| ||||    
T  22486682 cgtgagcttaactcagttggtaagaacaatgcataatatatgcaagatttggggttcgaatttcggccac 22486751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 32928654 - 32928578
Alignment:
Q  138 gtcatcgtgagcttaattcagttggtagaaacaatgaataatatatataagatttgtggttcaaatctcgaccaccac 215  Q
    |||||||||||||||  | | ||||||||| ||||| |||||||||||||||| ||  ||||||| | ||||||||||    
T  32928654 gtcatcgtgagcttagcttaattggtagaa-caatgcataatatatataagatctggagttcaaaccccgaccaccac 32928578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 33223866 - 33223907
Alignment:
Q  142 tcgtgagcttaattcagttggtagaaacaatgaataatatat 183  Q
    |||||||||||  ||||||||||||||||||| |||||||||    
T  33223866 tcgtgagcttagctcagttggtagaaacaatgcataatatat 33223907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 45309206 - 45309149
Alignment:
Q  142 tcgtgagcttaattcagttggtagaaacaatgaataatatatataagatttgtggttc 199  Q
    |||||||||||| |||||||||| |||||||  |||||||||| ||| |||| |||||    
T  45309206 tcgtgagcttaactcagttggtataaacaatttataatatatacaaggtttgaggttc 45309149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 202
Target Start/End: Complemental strand, 47377417 - 47377352
Alignment:
Q  137 tgtcatcgtgagcttaattcagttggtagaaacaatgaataatatatataagatttgtggttcaaa 202  Q
    ||||||||||||||||| ||||||||||   |||||| |||||||||| ||| || | ||||||||    
T  47377417 tgtcatcgtgagcttaactcagttggtaaggacaatgcataatatatacaaggttcgaggttcaaa 47377352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 142 - 202
Target Start/End: Original strand, 2078238 - 2078298
Alignment:
Q  142 tcgtgagcttaattcagttggtagaaacaatgaataatatatataagatttgtggttcaaa 202  Q
    |||||| ||||| |||||||||||| |||||| |||||||||  ||| |||| ||||||||    
T  2078238 tcgtgaacttaactcagttggtagagacaatgcataatatatgcaaggtttggggttcaaa 2078298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 142 - 215
Target Start/End: Complemental strand, 21818 - 21745
Alignment:
Q  142 tcgtgagcttaattcagttggtagaaacaatgaataatatatataagatttgtggttcaaatctcgaccaccac 215  Q
    |||||||||||  |||||||||| | |||||| |||| ||||| ||| | || |||||||||||||||||||||    
T  21818 tcgtgagcttagctcagttggtatagacaatgcataaaatatacaaggtatgaggttcaaatctcgaccaccac 21745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 137 - 214
Target Start/End: Complemental strand, 19123 - 19046
Alignment:
Q  137 tgtcatcgtgagcttaattcagttggtagaaacaatgaataatatatataagatttgtggttcaaatctcgaccacca 214  Q
    ||||||||||||||||| |||||||||| |||||||  |||| ||||  |||||  | | ||||||||||||||||||    
T  19123 tgtcatcgtgagcttaactcagttggtataaacaatatataaaatatgcaagatccgagtttcaaatctcgaccacca 19046  T

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Target: chr6 (Bit Score: 34; Significance: 0.0000000008; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 5632132 - 5632181
Alignment:
Q  142 tcgtgagcttaattcagttggtagaaacaatgaataatatatataagatt 191  Q
    |||||||||||| ||| ||||||| ||||||| |||||||||||||||||    
T  5632132 tcgtgagcttaactcaattggtaggaacaatgtataatatatataagatt 5632181  T

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Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 202
Target Start/End: Original strand, 29457192 - 29457239
Alignment:
Q  155 tcagttggtagaaacaatgaataatatatataagatttgtggttcaaa 202  Q
    ||||||||||| || |||| |||||||||||||| |||||||||||||    
T  29457192 tcagttggtaggaaaaatgcataatatatataaggtttgtggttcaaa 29457239  T

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Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 331949 - 331879
Alignment:
Q  142 tcgtgagcttaattcagttggtagaaacaatgaataatatatataagatttgtggttcaaatctcgaccac 212  Q
    |||||||||||| |||||||||||| |||||| |||||||||  ||| |||| | |||||| |||| ||||    
T  331949 tcgtgagcttaactcagttggtagagacaatgcataatatatgcaaggtttgggattcaaacctcggccac 331879  T

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Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 9311993 - 9311923
Alignment:
Q  142 tcgtgagcttaattcagttggtagaaacaatgaataatatatataagatttgtggttcaaatctcgaccac 212  Q
    |||||||||||| ||||||||||  || |||  ||||||||| ||||||||| |||||||| | |||||||    
T  9311993 tcgtgagcttaactcagttggtatgaataatacataatatatgtaagatttgaggttcaaaccccgaccac 9311923  T

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Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 1989105 - 1989037
Alignment:
Q  142 tcgtgagcttaattcagttggtagaaacaatgaataatatatataagatttgtggttcaaatctcgacca 211  Q
    |||||||||||| ||||||||||   |||||| ||||||||| |||| |||| |||||||| ||||||||    
T  1989105 tcgtgagcttaactcagttggta-tgacaatgcataatatatgtaaggtttgaggttcaaacctcgacca 1989037  T

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Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 183
Target Start/End: Complemental strand, 29335650 - 29335597
Alignment:
Q  130 aaagaaatgtcatcgtgagcttaattcagttggtagaaacaatgaataatatat 183  Q
    |||| |||||| |||||||||||| |||||| ||| |||||||| |||||||||    
T  29335650 aaagcaatgtcctcgtgagcttaactcagttagtataaacaatgcataatatat 29335597  T

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Target: scaffold0122 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 142 - 215
Target Start/End: Complemental strand, 14249 - 14176
Alignment:
Q  142 tcgtgagcttaattcagttggtagaaacaatgaataatatatataagatttgtggttcaaatctcgaccaccac 215  Q
    ||||||| |||| ||||||||||  ||||||| |||||||||  ||| | ||||||||||| | ||||||||||    
T  14249 tcgtgagtttaactcagttggtatgaacaatgcataatatatgcaaggtatgtggttcaaaccccgaccaccac 14176  T

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Target: scaffold0003 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 142 - 187
Target Start/End: Original strand, 349625 - 349670
Alignment:
Q  142 tcgtgagcttaattcagttggtagaaacaatgaataatatatataa 187  Q
    ||||||||||| |||| ||||||| ||||||| |||||||||||||    
T  349625 tcgtgagcttagttcaattggtaggaacaatgtataatatatataa 349670  T

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Target: scaffold1063 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold1063
Description:

Target: scaffold1063; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 1129 - 1077
Alignment:
Q  136 atgtcatcgtgagcttaattcagttggtagaaacaatgaataatatatataag 188  Q
    |||||||||||||||||| |||||| ||||  |||||| ||||||||| ||||    
T  1129 atgtcatcgtgagcttaactcagttagtagggacaatgcataatatatgtaag 1077  T

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Target: scaffold0012 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 137 - 173
Target Start/End: Complemental strand, 240323 - 240287
Alignment:
Q  137 tgtcatcgtgagcttaattcagttggtagaaacaatg 173  Q
    ||||||||||||||||| |||||||||||| ||||||    
T  240323 tgtcatcgtgagcttaactcagttggtagagacaatg 240287  T

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