View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4131_low_7 (Length: 352)
Name: NF4131_low_7
Description: NF4131
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4131_low_7 |
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Alignment Details
Target: chr2 (Bit Score: 322; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 1 - 334
Target Start/End: Complemental strand, 37662674 - 37662341
Alignment:
| Q |
1 |
tagcagaaccataaccaaaacttgatgaatctttcagaatcccttcaagaacagaatgcaatgcagttgaaaatgaagaatacccttttgaaccaagtaa |
100 |
Q |
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| T |
37662674 |
tagcagaaccataaccaaaacttgatgaatctttcagaatcccttcgagaacagaatgcaatgcagttgaaaatgaagaatacccttttgaaccaagtaa |
37662575 |
T |
|
| Q |
101 |
ctgaacaaccttgttccattcaacaaagttcttgaaatcaccaacttcatatgttgaatttgtcttgaatgaaggacaagttggtgaacgaatgaaatca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |
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| T |
37662574 |
ctgaacaaccttgttccattcaacaaagttcttgaaatcaccaacttcatatgttgaattggttttgaatgaaggacaagttggtgaacgaatgaaatca |
37662475 |
T |
|
| Q |
201 |
gaaccaccttgtaaaacttcacgttgcaaagaagaaaaaggtccaagaacaccatgaatgttgaattcttcaccaagaaacatatcagggtttgatatca |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37662474 |
gaaccaccttgtaaaacttcacgttgcaaagaagaaaaaggtccaagaacaccatgaatgttgaattcttcaccaagaaacatatcagggtttgatatca |
37662375 |
T |
|
| Q |
301 |
aaacatggttgatctcaactgttttttgcaaagt |
334 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
37662374 |
aaacatggttgatctcaactgttttttgcaaagt |
37662341 |
T |
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