View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4133_low_11 (Length: 218)

Name: NF4133_low_11
Description: NF4133
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4133_low_11
NF4133_low_11
[»] chr4 (64 HSPs)
chr4 (21-203)||(45289879-45290065)
chr4 (72-204)||(49812125-49812257)
chr4 (97-193)||(34020955-34021052)
chr4 (71-195)||(48740415-48740539)
chr4 (81-203)||(37309602-37309725)
chr4 (123-203)||(39979726-39979807)
chr4 (75-201)||(18849841-18849967)
chr4 (97-203)||(41710224-41710331)
chr4 (102-203)||(44020842-44020944)
chr4 (123-203)||(3685957-3686038)
chr4 (100-192)||(33047421-33047511)
chr4 (107-203)||(54729563-54729660)
chr4 (107-205)||(8294961-8295060)
chr4 (122-201)||(35998199-35998280)
chr4 (107-201)||(39052983-39053077)
chr4 (123-203)||(1825328-1825409)
chr4 (97-187)||(14009730-14009821)
chr4 (97-203)||(29644276-29644382)
chr4 (131-202)||(35909949-35910019)
chr4 (73-203)||(42024281-42024412)
chr4 (123-193)||(48400721-48400791)
chr4 (75-201)||(31862695-31862819)
chr4 (100-192)||(34791043-34791136)
chr4 (97-203)||(39976470-39976578)
chr4 (122-198)||(51527364-51527441)
chr4 (81-167)||(1796548-1796635)
chr4 (97-203)||(42185876-42185983)
chr4 (113-203)||(49306523-49306614)
chr4 (72-170)||(283591-283689)
chr4 (72-170)||(20964408-20964506)
chr4 (121-203)||(28974251-28974333)
chr4 (107-203)||(27977073-27977174)
chr4 (122-202)||(40881274-40881355)
chr4 (123-192)||(51572319-51572388)
chr4 (107-192)||(29656498-29656585)
chr4 (108-195)||(42544140-42544228)
chr4 (97-192)||(41203658-41203753)
chr4 (117-203)||(47787927-47788014)
chr4 (71-170)||(53848227-53848325)
chr4 (137-203)||(2906645-2906711)
chr4 (97-201)||(42132733-42132838)
chr4 (128-203)||(38319862-38319938)
chr4 (113-192)||(38861323-38861403)
chr4 (152-203)||(38976966-38977018)
chr4 (128-171)||(388533-388576)
chr4 (123-170)||(3503169-3503216)
chr4 (137-203)||(22496757-22496824)
chr4 (113-201)||(29815179-29815269)
chr4 (137-203)||(32559123-32559190)
chr4 (123-203)||(39258352-39258438)
chr4 (137-203)||(41436441-41436508)
chr4 (123-170)||(43335137-43335184)
chr4 (137-203)||(55360428-55360497)
chr4 (142-203)||(22872468-22872530)
chr4 (97-170)||(36047215-36047289)
chr4 (137-202)||(42670451-42670517)
chr4 (72-186)||(43420920-43421034)
chr4 (118-164)||(54339300-54339346)
chr4 (137-201)||(28279797-28279862)
chr4 (137-170)||(38160268-38160301)
chr4 (72-203)||(4360488-4360619)
chr4 (72-171)||(21954816-21954916)
chr4 (107-192)||(26185118-26185205)
chr4 (123-182)||(42738433-42738493)
[»] chr5 (47 HSPs)
chr5 (72-203)||(3725082-3725213)
chr5 (71-201)||(22582954-22583086)
chr5 (71-201)||(39008024-39008154)
chr5 (72-201)||(4044560-4044690)
chr5 (119-203)||(13716952-13717037)
chr5 (71-201)||(42575721-42575852)
chr5 (117-203)||(15814603-15814688)
chr5 (123-203)||(4412329-4412410)
chr5 (72-203)||(6610730-6610864)
chr5 (107-201)||(35646172-35646267)
chr5 (107-203)||(11099558-11099655)
chr5 (131-203)||(20189846-20189919)
chr5 (72-201)||(8369779-8369910)
chr5 (123-203)||(17243035-17243115)
chr5 (71-201)||(15898086-15898216)
chr5 (107-203)||(41184047-41184144)
chr5 (122-201)||(8692901-8692981)
chr5 (108-187)||(13135684-13135764)
chr5 (108-203)||(35334607-35334703)
chr5 (97-203)||(33012274-33012381)
chr5 (113-202)||(33988135-33988226)
chr5 (123-184)||(7276329-7276391)
chr5 (100-162)||(41686614-41686676)
chr5 (123-203)||(858281-858362)
chr5 (123-195)||(25814310-25814383)
chr5 (100-195)||(34534847-34534941)
chr5 (90-195)||(7613620-7613726)
chr5 (121-202)||(14259611-14259693)
chr5 (117-171)||(36446791-36446845)
chr5 (72-185)||(39060511-39060628)
chr5 (113-201)||(5357900-5357989)
chr5 (97-170)||(20369196-20369268)
chr5 (136-201)||(36006975-36007039)
chr5 (117-170)||(36469213-36469266)
chr5 (123-203)||(13422433-13422513)
chr5 (137-202)||(14184130-14184197)
chr5 (135-195)||(32659776-32659835)
chr5 (138-203)||(35585697-35585764)
chr5 (90-203)||(42211246-42211360)
chr5 (123-170)||(9426668-9426715)
chr5 (123-170)||(13597975-13598022)
chr5 (144-203)||(39183708-39183767)
chr5 (116-170)||(24230842-24230896)
chr5 (113-194)||(30437831-30437913)
chr5 (136-201)||(42818863-42818929)
chr5 (136-172)||(791942-791978)
chr5 (137-201)||(10044629-10044693)
[»] chr1 (62 HSPs)
chr1 (97-203)||(27698732-27698839)
chr1 (100-203)||(49494244-49494347)
chr1 (68-201)||(4466237-4466371)
chr1 (101-192)||(17342752-17342844)
chr1 (97-203)||(36467276-36467382)
chr1 (107-199)||(43895777-43895870)
chr1 (100-192)||(2219540-2219631)
chr1 (125-192)||(7785366-7785433)
chr1 (113-203)||(17724795-17724886)
chr1 (113-203)||(46536276-46536367)
chr1 (123-203)||(10370268-10370349)
chr1 (69-192)||(32347836-32347960)
chr1 (97-203)||(8773158-8773269)
chr1 (97-203)||(19533000-19533107)
chr1 (102-203)||(34877171-34877272)
chr1 (121-201)||(36784258-36784339)
chr1 (107-203)||(38664331-38664428)
chr1 (99-203)||(46495940-46496045)
chr1 (113-204)||(3555635-3555727)
chr1 (100-203)||(8327640-8327744)
chr1 (107-203)||(45889329-45889426)
chr1 (101-203)||(26583652-26583755)
chr1 (97-203)||(28839259-28839366)
chr1 (137-203)||(30903308-30903375)
chr1 (72-201)||(2886066-2886196)
chr1 (122-203)||(28908038-28908120)
chr1 (78-164)||(37541238-37541324)
chr1 (107-192)||(49944721-49944806)
chr1 (123-203)||(51749264-51749345)
chr1 (123-203)||(52830494-52830575)
chr1 (118-201)||(5442282-5442365)
chr1 (72-203)||(7787568-7787704)
chr1 (122-187)||(6784948-6785014)
chr1 (80-201)||(24131483-24131605)
chr1 (123-192)||(28277130-28277200)
chr1 (107-195)||(705438-705527)
chr1 (123-192)||(3718941-3719010)
chr1 (123-203)||(5040656-5040737)
chr1 (97-201)||(16039997-16040102)
chr1 (123-164)||(50014756-50014797)
chr1 (123-187)||(1859453-1859517)
chr1 (136-203)||(30749714-30749782)
chr1 (136-203)||(30771165-30771233)
chr1 (112-172)||(44580451-44580511)
chr1 (124-195)||(48242679-48242751)
chr1 (116-187)||(51848793-51848865)
chr1 (138-201)||(27210050-27210113)
chr1 (137-203)||(29225713-29225780)
chr1 (123-170)||(51049455-51049502)
chr1 (107-192)||(11324178-11324264)
chr1 (100-170)||(11425984-11426054)
chr1 (107-192)||(11482199-11482285)
chr1 (136-201)||(31798377-31798443)
chr1 (123-192)||(37495772-37495839)
chr1 (137-201)||(20988565-20988630)
chr1 (97-170)||(32804172-32804245)
chr1 (135-203)||(44657303-44657372)
chr1 (137-201)||(52432272-52432337)
chr1 (137-201)||(7075486-7075550)
chr1 (135-171)||(26606240-26606276)
chr1 (72-164)||(26924390-26924481)
chr1 (122-203)||(46880364-46880443)
[»] chr8 (51 HSPs)
chr8 (100-201)||(5391971-5392074)
chr8 (72-203)||(38252518-38252650)
chr8 (71-201)||(32241506-32241640)
chr8 (72-201)||(2119611-2119741)
chr8 (71-203)||(12653579-12653714)
chr8 (72-203)||(28802662-28802794)
chr8 (72-203)||(32967357-32967489)
chr8 (122-187)||(33191005-33191071)
chr8 (72-203)||(29615690-29615825)
chr8 (97-201)||(36012054-36012159)
chr8 (123-203)||(44615445-44615526)
chr8 (121-203)||(34133071-34133154)
chr8 (97-203)||(21587196-21587304)
chr8 (137-202)||(38201472-38201537)
chr8 (123-203)||(3442430-3442510)
chr8 (108-203)||(39171474-39171570)
chr8 (72-201)||(44790504-44790634)
chr8 (126-184)||(22325054-22325113)
chr8 (72-202)||(2796934-2797066)
chr8 (107-203)||(5962553-5962651)
chr8 (72-201)||(14689855-14689985)
chr8 (123-203)||(33826181-33826258)
chr8 (122-203)||(34287159-34287241)
chr8 (123-171)||(29730981-29731029)
chr8 (123-202)||(31410689-31410769)
chr8 (100-171)||(138957-139027)
chr8 (90-201)||(2349261-2349375)
chr8 (117-203)||(13085031-13085118)
chr8 (152-203)||(33746299-33746350)
chr8 (100-170)||(17790211-17790281)
chr8 (117-201)||(32231802-32231887)
chr8 (99-203)||(44975829-44975933)
chr8 (72-203)||(2195363-2195495)
chr8 (100-201)||(31132652-31132755)
chr8 (123-201)||(4274381-4274460)
chr8 (128-171)||(8394631-8394674)
chr8 (135-170)||(42797801-42797836)
chr8 (137-171)||(138802-138836)
chr8 (132-187)||(4480539-4480596)
chr8 (122-203)||(42558661-42558743)
chr8 (119-195)||(886536-886613)
chr8 (138-202)||(2875167-2875232)
chr8 (137-170)||(8566520-8566553)
chr8 (119-203)||(9014542-9014627)
chr8 (113-170)||(22490322-22490379)
chr8 (97-170)||(33743695-33743768)
chr8 (117-201)||(38908766-38908853)
chr8 (72-164)||(27571387-27571482)
chr8 (100-164)||(34133004-34133068)
chr8 (137-192)||(45421031-45421087)
chr8 (123-203)||(45425429-45425512)
[»] chr2 (48 HSPs)
chr2 (72-201)||(3100294-3100425)
chr2 (107-203)||(43077806-43077902)
chr2 (72-201)||(7213370-7213500)
chr2 (72-203)||(3123539-3123670)
chr2 (72-203)||(40964948-40965079)
chr2 (124-201)||(33880106-33880183)
chr2 (72-201)||(28572106-28572233)
chr2 (126-201)||(15859424-15859500)
chr2 (121-203)||(41436023-41436106)
chr2 (72-171)||(44534600-44534698)
chr2 (97-203)||(31592471-31592577)
chr2 (113-203)||(10818556-10818648)
chr2 (100-203)||(33751384-33751488)
chr2 (123-187)||(44194598-44194662)
chr2 (97-203)||(7650055-7650161)
chr2 (97-164)||(13375594-13375660)
chr2 (122-192)||(28925939-28926010)
chr2 (72-209)||(37247958-37248097)
chr2 (65-201)||(5212040-5212175)
chr2 (90-186)||(38873017-38873114)
chr2 (117-201)||(9724821-9724905)
chr2 (117-195)||(14284362-14284440)
chr2 (97-201)||(28526886-28526989)
chr2 (122-203)||(28108455-28108538)
chr2 (136-181)||(435186-435232)
chr2 (72-178)||(564992-565098)
chr2 (137-203)||(9936977-9937043)
chr2 (154-203)||(7648946-7648995)
chr2 (123-164)||(8385022-8385063)
chr2 (73-170)||(13221965-13222061)
chr2 (107-203)||(24775888-24775985)
chr2 (71-203)||(30757648-30757780)
chr2 (121-185)||(42881375-42881440)
chr2 (137-202)||(18181294-18181361)
chr2 (101-203)||(6075420-6075525)
chr2 (113-201)||(24451719-24451809)
chr2 (137-203)||(31546098-31546165)
chr2 (72-170)||(314330-314428)
chr2 (97-170)||(3199812-3199886)
chr2 (165-203)||(13375270-13375308)
chr2 (123-193)||(43950529-43950599)
chr2 (137-201)||(1908576-1908641)
chr2 (123-185)||(19009791-19009855)
chr2 (122-202)||(19515826-19515907)
chr2 (134-203)||(23684917-23684986)
chr2 (137-201)||(37529153-37529218)
chr2 (140-187)||(14136727-14136775)
chr2 (137-192)||(36103541-36103597)
[»] chr7 (49 HSPs)
chr7 (72-203)||(30462911-30463043)
chr7 (108-203)||(45890917-45891012)
chr7 (72-201)||(12308275-12308403)
chr7 (103-203)||(29434660-29434761)
chr7 (72-201)||(33774125-33774253)
chr7 (97-203)||(29257467-29257574)
chr7 (107-203)||(34963891-34963988)
chr7 (72-203)||(2846756-2846888)
chr7 (72-185)||(7425976-7426089)
chr7 (123-203)||(37157117-37157197)
chr7 (114-192)||(11616498-11616577)
chr7 (107-184)||(5083573-5083651)
chr7 (137-203)||(36117622-36117688)
chr7 (107-192)||(39693721-39693807)
chr7 (97-202)||(46288512-46288617)
chr7 (102-164)||(48981304-48981366)
chr7 (123-203)||(31581523-31581604)
chr7 (72-201)||(5068380-5068510)
chr7 (72-203)||(33584457-33584590)
chr7 (117-192)||(40590916-40590992)
chr7 (107-197)||(7456673-7456764)
chr7 (107-201)||(38181956-38182051)
chr7 (124-203)||(40038191-40038270)
chr7 (113-203)||(44604557-44604648)
chr7 (107-203)||(8149889-8149986)
chr7 (101-170)||(21412153-21412222)
chr7 (72-192)||(46095539-46095658)
chr7 (123-187)||(47453950-47454015)
chr7 (107-170)||(28923341-28923404)
chr7 (137-195)||(27337961-27338019)
chr7 (117-170)||(25778677-25778730)
chr7 (100-157)||(49100921-49100978)
chr7 (117-192)||(5724798-5724874)
chr7 (120-203)||(28333114-28333198)
chr7 (72-203)||(37496477-37496609)
chr7 (123-203)||(40023807-40023887)
chr7 (165-203)||(18235179-18235217)
chr7 (72-146)||(26938577-26938651)
chr7 (137-202)||(1099167-1099232)
chr7 (97-192)||(23703835-23703932)
chr7 (117-170)||(27621774-27621827)
chr7 (137-166)||(29792260-29792289)
chr7 (137-201)||(30659562-30659627)
chr7 (137-201)||(37264273-37264338)
chr7 (123-164)||(37491026-37491067)
chr7 (135-203)||(14648999-14649070)
chr7 (90-201)||(23111612-23111724)
chr7 (72-186)||(32775877-32775993)
chr7 (72-203)||(34064110-34064242)
[»] chr6 (12 HSPs)
chr6 (99-201)||(31265702-31265804)
chr6 (71-201)||(3604682-3604813)
chr6 (72-203)||(30064029-30064160)
chr6 (97-202)||(15081343-15081449)
chr6 (125-203)||(7301160-7301239)
chr6 (137-203)||(9755227-9755293)
chr6 (72-203)||(33109268-33109400)
chr6 (118-182)||(34915903-34915968)
chr6 (82-192)||(4238327-4238438)
chr6 (100-170)||(4552825-4552895)
chr6 (72-162)||(7359138-7359228)
chr6 (136-202)||(31723453-31723520)
[»] chr3 (35 HSPs)
chr3 (72-203)||(32023181-32023312)
chr3 (72-203)||(38600886-38601017)
chr3 (71-201)||(54122306-54122435)
chr3 (106-203)||(41031501-41031599)
chr3 (97-201)||(21585492-21585597)
chr3 (72-203)||(39365097-39365229)
chr3 (71-187)||(51164843-51164962)
chr3 (81-201)||(21296585-21296712)
chr3 (100-202)||(48744148-48744251)
chr3 (97-203)||(3862252-3862358)
chr3 (123-192)||(33994603-33994673)
chr3 (123-201)||(54021540-54021618)
chr3 (122-203)||(54493854-54493935)
chr3 (72-201)||(1334863-1334987)
chr3 (124-203)||(49003217-49003297)
chr3 (97-203)||(36097735-36097843)
chr3 (71-203)||(39329830-39329963)
chr3 (90-203)||(15280517-15280632)
chr3 (117-203)||(24618992-24619079)
chr3 (113-203)||(46786061-46786152)
chr3 (72-166)||(12744708-12744802)
chr3 (107-192)||(39866644-39866730)
chr3 (117-202)||(44219114-44219200)
chr3 (117-200)||(54458392-54458477)
chr3 (100-192)||(5245335-5245428)
chr3 (123-203)||(9017745-9017828)
chr3 (100-203)||(30261582-30261686)
chr3 (122-170)||(43640679-43640727)
chr3 (137-203)||(2868534-2868601)
chr3 (137-172)||(8498215-8498250)
chr3 (99-203)||(45746287-45746393)
chr3 (123-187)||(26134799-26134864)
chr3 (137-201)||(46194288-46194353)
chr3 (137-201)||(50150449-50150514)
chr3 (123-202)||(54845597-54845679)
[»] scaffold0007 (2 HSPs)
scaffold0007 (121-201)||(230201-230281)
scaffold0007 (97-195)||(157947-158046)
[»] scaffold0006 (1 HSPs)
scaffold0006 (71-201)||(229720-229848)
[»] scaffold0321 (1 HSPs)
scaffold0321 (122-203)||(9629-9711)
[»] scaffold0034 (2 HSPs)
scaffold0034 (154-203)||(98803-98852)
scaffold0034 (97-161)||(97979-98043)
[»] scaffold0086 (1 HSPs)
scaffold0086 (123-201)||(5765-5843)
[»] scaffold0155 (1 HSPs)
scaffold0155 (71-201)||(8036-8166)
[»] scaffold0045 (1 HSPs)
scaffold0045 (101-195)||(26247-26341)
[»] scaffold0001 (1 HSPs)
scaffold0001 (113-203)||(394715-394805)


Alignment Details
Target: chr4 (Bit Score: 145; Significance: 2e-76; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 21 - 203
Target Start/End: Original strand, 45289879 - 45290065
Alignment:
Q  21 tacggttgatattattt--actttttaccacaataaaagttttctttacattttactcccttcgtcccacgataaataagtcatttgcaaaaataaagtg 118  Q
    ||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  45289879 tacggtttatattatttttactttttaccacaataaaagttttctttacattttactccctccgtcccacgataaataagtcatttgcaaaaataaagtg 45289978  T
Q  119 tctcaaaataattgagttatttcacttttcagtacaatattaatta--ttttttccctttataactctaatcaatattattttcatc 203  Q
    ||||||||||| ||| ||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||    
T  45289979 tctcaaaataactgaattatttcacttttcagtacaatatttattattttttttccctttataactctaatcaatattattttcatc 45290065  T

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Target: chr4; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 72 - 204
Target Start/End: Original strand, 49812125 - 49812257
Alignment:
Q  72 tactcccttcgtcccacgataaataagtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-tttttt 170  Q
    ||||||||||||||||  ||||   ||| ||||||||||| ||| |||| |||||||| ||||| ||||||||||||| |||||||||||||| ||||||    
T  49812125 tactcccttcgtcccataataatagagttatttgcaaaaaaaaa-tgtcccaaaataactgagtcatttcacttttcaatacaatattaattattttttt 49812223  T
Q  171 ccctttataactctaatcaatattattttcatct 204  Q
    ||||||||||||||||| |||| |||||||||||    
T  49812224 ccctttataactctaattaatactattttcatct 49812257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 97 - 193
Target Start/End: Original strand, 34020955 - 34021052
Alignment:
Q  97 agtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatat 193  Q
    ||||||||||||||| ||| ||||||||||||| ||||| ||||||||||||| |||||||| ||||| ||||||||||||||||||||||| |||||    
T  34020955 agtcatttgcaaaaaaaaaatgtctcaaaataagtgagtcatttcacttttcaatacaatataaattatttttttccctttataactctaattaatat 34021052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 71 - 195
Target Start/End: Original strand, 48740415 - 48740539
Alignment:
Q  71 ttactcccttcgtcccacgataaataagtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttt 169  Q
    ||||||||| |||| ||  |||| | ||||||||||||||| ||| ||||||||||||| ||||| |||||||||||||  ||||||||||||| |||||    
T  48740415 ttactccctccgtctcataataactgagtcatttgcaaaaaaaaa-tgtctcaaaataactgagtcatttcacttttcaaaacaatattaattacttttt 48740513  T
Q  170 tccctttataactctaatcaatatta 195  Q
    |||||||||||||||||| |||||||    
T  48740514 tccctttataactctaattaatatta 48740539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 81 - 203
Target Start/End: Original strand, 37309602 - 37309725
Alignment:
Q  81 cgtcccacgataaataagtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaattatt-ttttccctttata 179  Q
    ||||||| ||||| | |||||| |||||||| ||||||||||||||||  |||||||||||| |||||| || |||||||| |||| |||| ||||||||    
T  37309602 cgtcccatgataattgagtcatatgcaaaaagaaagtgtctcaaaatatctgagttatttcagttttcaatagaatattaactattgtttttcctttata 37309701  T
Q  180 actctaatcaatattattttcatc 203  Q
    |||||||| ||||||| |||||||    
T  37309702 actctaattaatattactttcatc 37309725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 123 - 203
Target Start/End: Original strand, 39979726 - 39979807
Alignment:
Q  123 aaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatattattttcatc 203  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||| ||||||| |||||||    
T  39979726 aaaataattgagttatttcacttttcaatacaatattaattactttttcccctttataactctaattaatattactttcatc 39979807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 75 - 201
Target Start/End: Complemental strand, 18849967 - 18849841
Alignment:
Q  75 tcccttcgtcccacgataaataagtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccc 173  Q
    ||||| |||||||| |||| | || |||||| ||||| ||| |||| |||||||| ||||| ||||||||||||| || ||||||||||| |||||||||    
T  18849967 tccctccgtcccacaataattgagccatttgtaaaaaaaaa-tgtcccaaaataactgagtcatttcacttttcaataaaatattaattacttttttccc 18849869  T
Q  174 tttataactctaatcaatattattttca 201  Q
    |||||||||||||| ||||||| |||||    
T  18849868 tttataactctaattaatattactttca 18849841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 97 - 203
Target Start/End: Complemental strand, 41710331 - 41710224
Alignment:
Q  97 agtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatatta 195  Q
    |||||||| ||| || |||||||| |||||||| |||| |||||||||||||| ||||  |||||||| ||||||||||||||||||||||| |||||||    
T  41710331 agtcattttcaataaaaaagtgtcccaaaataagtgagctatttcacttttcaatacatcattaattacttttttccctttataactctaattaatatta 41710232  T
Q  196 ttttcatc 203  Q
     |||||||    
T  41710231 ctttcatc 41710224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 102 - 203
Target Start/End: Complemental strand, 44020944 - 44020842
Alignment:
Q  102 tttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatattattttc 200  Q
    |||| ||||| ||| ||||||||||||||||| | |||| |||||||  |||||||||||||| ||||||| |||||||||||||||||||| || ||||    
T  44020944 tttgtaaaaaaaaaatgtctcaaaataattgaatcattttacttttcgatacaatattaattacttttttctctttataactctaatcaatactactttc 44020845  T
Q  201 atc 203  Q
    |||    
T  44020844 atc 44020842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 123 - 203
Target Start/End: Original strand, 3685957 - 3686038
Alignment:
Q  123 aaaataattgagttatttcacttttcagtacaatattaattatttttt-ccctttataactctaatcaatattattttcatc 203  Q
    ||||||| ||||| |||||||||| || |||||||||||||||||||| ||||||||||||||||| ||||||| |||||||    
T  3685957 aaaataactgagtcatttcactttccaatacaatattaattattttttcccctttataactctaattaatattactttcatc 3686038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 100 - 192
Target Start/End: Original strand, 33047421 - 33047511
Alignment:
Q  100 catttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaattattttttccctttataactctaatcaata 192  Q
    |||||||||||| |||||||| |||||||| ||||| ||||||||||||| ||||||||||||||  ||||   |||||||||||||||||||    
T  33047421 catttgcaaaaaaaaagtgtcccaaaataactgagtcatttcacttttcaatacaatattaattacatttt--ttttataactctaatcaata 33047511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 107 - 203
Target Start/End: Complemental strand, 54729660 - 54729563
Alignment:
Q  107 aaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatattattttcatc 203  Q
    ||||| ||||| ||||||||||| ||| | |||||||||| || |||||||||||||| ||||||||||||||||||||||| |||| || |||||||    
T  54729660 aaaaaaaaagtatctcaaaataactgaatcatttcactttccaatacaatattaattacttttttccctttataactctaattaatactactttcatc 54729563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 107 - 205
Target Start/End: Original strand, 8294961 - 8295060
Alignment:
Q  107 aaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatattattttcatctc 205  Q
    ||||| |||||||| ||||||||  |||| ||||||||||||| ||||||||||||||  ||||||||||||||||||||||  ||| || |||||||||    
T  8294961 aaaaaaaaagtgtcccaaaataaccgagtcatttcacttttcaatacaatattaattacctttttccctttataactctaatttatactactttcatctc 8295060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 122 - 201
Target Start/End: Complemental strand, 35998280 - 35998199
Alignment:
Q  122 caaaataattgagttatttcacttttcagtacaatattaattat--tttttccctttataactctaatcaatattattttca 201  Q
    |||||||||||||| ||||||||||||  |||||||||||||||  |||||||||||||||||||||| |||| || |||||    
T  35998280 caaaataattgagtcatttcacttttcgatacaatattaattattatttttccctttataactctaattaatactactttca 35998199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 107 - 201
Target Start/End: Complemental strand, 39053077 - 39052983
Alignment:
Q  107 aaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaattattttttccctttataactctaatcaatattattttca 201  Q
    ||||| ||| |||| |||||||||||||  ||||||||||||| || |||||||| |||||||||| |||||||||||||| |||| || |||||    
T  39053077 aaaaaaaaaatgtcacaaaataattgagccatttcacttttcaatataatattaactattttttccttttataactctaattaatactactttca 39052983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 123 - 203
Target Start/End: Complemental strand, 1825409 - 1825328
Alignment:
Q  123 aaaataattgagttatttcacttttcagtacaatattaattatt-ttttccctttataactctaatcaatattattttcatc 203  Q
    ||||||| ||||| ||||||||||||| || ||||||||||||| |||||  |||||||||||||| |||||||||||||||    
T  1825409 aaaataactgagtcatttcacttttcaatataatattaattatttttttctttttataactctaattaatattattttcatc 1825328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 97 - 187
Target Start/End: Complemental strand, 14009821 - 14009730
Alignment:
Q  97 agtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaattat-tttttccctttataactctaat 187  Q
    ||||||||||||||| | | |||  ||||||||| ||| |||||||||||||||||| ||||||||||| |||||| |||||||||| ||||    
T  14009821 agtcatttgcaaaaaaacattgttccaaaataatcgagatatttcacttttcagtactatattaattatatttttctctttataactttaat 14009730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 97 - 203
Target Start/End: Original strand, 29644276 - 29644382
Alignment:
Q  97 agtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatatta 195  Q
    ||||||||||||||| ||| |||| |||||||| ||||  ||||||||||||| |||||||||||| | |||||||| ||||||||| |||| |||| ||    
T  29644276 agtcatttgcaaaaa-aaattgtcccaaaataactgagacatttcacttttcaatacaatattaataacttttttccttttataactataattaatacta 29644374  T
Q  196 ttttcatc 203  Q
     |||||||    
T  29644375 ctttcatc 29644382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 131 - 202
Target Start/End: Complemental strand, 35910019 - 35909949
Alignment:
Q  131 tgagttatttcacttttcagtacaatattaattattttttccctttataactctaatcaatattattttcat 202  Q
    |||||||||| |||||||| |||||||||||||||||||| ||||||| |||||||| ||||||| ||||||    
T  35910019 tgagttattttacttttcaatacaatattaattatttttt-cctttattactctaattaatattactttcat 35909949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 73 - 203
Target Start/End: Complemental strand, 42024412 - 42024281
Alignment:
Q  73 actcccttcgtcccacgataaataagtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaattatt-ttttc 171  Q
    ||||||| |||||||  |||| | |||||||| ||| || ||||||||  || |||| ||||| ||||||||||||| ||||  |||||||||| |||||    
T  42024412 actccctccgtcccataataactgagtcattttcaataaaaaagtgtcctaagataaatgagtcatttcacttttcaatacatcattaattatttttttc 42024313  T
Q  172 cctttataactctaatcaatattattttcatc 203  Q
    ||||||||||| |||| |||| || |||||||    
T  42024312 cctttataactataattaatactactttcatc 42024281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 193
Target Start/End: Complemental strand, 48400791 - 48400721
Alignment:
Q  123 aaaataattgagttatttcacttttcagtacaatattaattattttttccctttataactctaatcaatat 193  Q
    ||||||||||||| ||||||||||||| |||||||||||||| ||||||| ||||  |||||||| |||||    
T  48400791 aaaataattgagtcatttcacttttcaatacaatattaattactttttccttttacgactctaattaatat 48400721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 75 - 201
Target Start/End: Original strand, 31862695 - 31862819
Alignment:
Q  75 tcccttcgtcccacgataaataagtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccc 173  Q
    ||||| ||||| || |||| | ||||||||| ||||| |||   || ||||||||  |||| ||||||||||||| ||| |||||||||| |||||||||    
T  31862695 tccctccgtccaacaataattgagtcatttgaaaaaaaaaa---tcccaaaataaccgagtcatttcacttttcaatacgatattaattatttttttccc 31862791  T
Q  174 tttataactctaatcaatattattttca 201  Q
    |||||||||||||| |||| || |||||    
T  31862792 tttataactctaattaatactactttca 31862819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 100 - 192
Target Start/End: Complemental strand, 34791136 - 34791043
Alignment:
Q  100 catttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaata 192  Q
    |||||||||||| ||| | ||  ||||||||||||| |||| |||||| | |||||||||||||| |||||| |||||||||||||||| ||||    
T  34791136 catttgcaaaaaaaaattatcctaaaataattgagtcattttactttttaatacaatattaattactttttttcctttataactctaattaata 34791043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 97 - 203
Target Start/End: Complemental strand, 39976578 - 39976470
Alignment:
Q  97 agtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta--ttttttccctttataactctaatcaatatt 194  Q
    ||||||||||||||| |||||||| |||||||  ||||| |||||| |||||| | ||||||||||||  ||||||| ||||||||| || || |||| |    
T  39976578 agtcatttgcaaaaacaaagtgtcccaaaatatctgagtcatttcatttttcaatgcaatattaattactttttttctctttataacactgattaatact 39976479  T
Q  195 attttcatc 203  Q
    | |||||||    
T  39976478 actttcatc 39976470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 122 - 198
Target Start/End: Original strand, 51527364 - 51527441
Alignment:
Q  122 caaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatattattt 198  Q
    |||| ||| ||||| ||||||||||| | |||||||||||||| |||||||| |||||||||||||| ||||||||||    
T  51527364 caaagtaactgagtcatttcactttttaatacaatattaattacttttttccttttataactctaattaatattattt 51527441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 81 - 167
Target Start/End: Complemental strand, 1796635 - 1796548
Alignment:
Q  81 cgtcccacgataaataagtcatttgcaaaaataa-agtgtctcaaaataattgagttatttcacttttcagtacaatattaattattt 167  Q
    ||||||||||||| | || |||||||||||| || |||||| |||||||| || || |||||| |||||| |||||||||||||||||    
T  1796635 cgtcccacgataactgagccatttgcaaaaaaaagagtgtcccaaaataactgggtcatttcagttttcaatacaatattaattattt 1796548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 97 - 203
Target Start/End: Complemental strand, 42185983 - 42185876
Alignment:
Q  97 agtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatatta 195  Q
    |||||||| ||| || ||| |||| |||||||| ||||| |||| |||||||| ||||  |||||||| |||||||| |||||||||||||| |||| ||    
T  42185983 agtcattttcaataaaaaaatgtcccaaaataagtgagtcattttacttttcaatacatcattaattacttttttccatttataactctaattaatacta 42185884  T
Q  196 ttttcatc 203  Q
     |||||||    
T  42185883 ctttcatc 42185876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 113 - 203
Target Start/End: Original strand, 49306523 - 49306614
Alignment:
Q  113 aaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatattattttcatc 203  Q
    |||||||| |||||||| ||||  ||||||||||||| ||||  |||||||| |||||| |||||||||||||||| |||| || |||||||    
T  49306523 aaagtgtcccaaaataagtgagccatttcacttttcaatacatcattaattattttttttcctttataactctaattaatactactttcatc 49306614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 72 - 170
Target Start/End: Complemental strand, 283689 - 283591
Alignment:
Q  72 tactcccttcgtcccacgataaataagtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaattatttttt 170  Q
    ||||| || |||||||  |||| ||||||||||||||||| |||||||| |||||||  | ||  ||||||||||||| | |||||||||||| |||||    
T  283689 tactcactccgtcccataataactaagtcatttgcaaaaacaaagtgtcccaaaatatctaagccatttcacttttcaatgcaatattaattacttttt 283591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 72 - 170
Target Start/End: Complemental strand, 20964506 - 20964408
Alignment:
Q  72 tactcccttcgtcccacgataaataagtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaattatttttt 170  Q
    |||||||| |||||||  |||| | ||||||||||||||| | | |||| || || ||||||  |||||||||||||| |||||||||||||| |||||    
T  20964506 tactccctccgtcccataataactgagtcatttgcaaaaaaatattgtcccagaaaaattgacctatttcacttttcaatacaatattaattacttttt 20964408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 28974251 - 28974333
Alignment:
Q  121 tcaaaataattgagttatttcacttttcagtacaatattaattattttttccctttataactctaatcaatattattttcatc 203  Q
    ||||||||| ||||| ||||||||||||| |||||||||||| ||||||| | ||||||| ||| || |||| || |||||||    
T  28974251 tcaaaataactgagtcatttcacttttcaatacaatattaataatttttttcatttataattctgattaatactactttcatc 28974333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 203
Target Start/End: Original strand, 27977073 - 27977174
Alignment:
Q  107 aaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-----ttttttccctttataactctaatcaatattattttca 201  Q
    ||||| ||||||||||||||||| || |||| ||||||||||| ||||| ||||||||     ||||||||  ||||||||||||| ||||| | |||||    
T  27977073 aaaaaaaaagtgtctcaaaataactgggttacttcacttttcaatacaacattaattacttttttttttcctattataactctaattaatatcactttca 27977172  T
Q  202 tc 203  Q
    ||    
T  27977173 tc 27977174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 202
Target Start/End: Complemental strand, 40881355 - 40881274
Alignment:
Q  122 caaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatattattttcat 202  Q
    ||||||||  |||| ||||||||||||| ||||||| |||||| |||||||| |||||||||||||| |||| || ||||||    
T  40881355 caaaataaccgagtcatttcacttttcaatacaatagtaattacttttttccttttataactctaataaatactactttcat 40881274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 192
Target Start/End: Complemental strand, 51572388 - 51572319
Alignment:
Q  123 aaaataattgagttatttcacttttcagtacaatattaattattttttccctttataactctaatcaata 192  Q
    ||||||||||| ||||||||||||||| ||||||||||||| ||||||    ||||||||||||| ||||    
T  51572388 aaaataattgacttatttcacttttcaatacaatattaatttttttttttaattataactctaattaata 51572319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 107 - 192
Target Start/End: Original strand, 29656498 - 29656585
Alignment:
Q  107 aaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta--ttttttccctttataactctaatcaata 192  Q
    ||||| |||||||| |||||||| |||   ||||||||||||| ||||  ||||||||  ||||||||||||||||||||||| ||||    
T  29656498 aaaaaaaaagtgtcccaaaataagtgaaccatttcacttttcaatacatcattaattattttttttccctttataactctaattaata 29656585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 195
Target Start/End: Original strand, 42544140 - 42544228
Alignment:
Q  108 aaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatatta 195  Q
    |||| ||||||||  ||||||| ||||| ||||||||||||| ||||  ||||| || |||||| |||||||||||||||| |||||||    
T  42544140 aaaaaaaagtgtcataaaataaatgagtcatttcacttttcaatacatcattaactactttttttcctttataactctaattaatatta 42544228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 192
Target Start/End: Original strand, 41203658 - 41203753
Alignment:
Q  97 agtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta--ttttttccctttataactctaatcaata 192  Q
    ||||||||||||||| ||  |||| |||| ||| ||||| ||||||||| ||| ||||||||||||||  |||||||  |||||||||||||| ||||    
T  41203658 agtcatttgcaaaaaaaa--tgtcacaaactaactgagtcatttcacttatcaatacaatattaattactttttttcattttataactctaattaata 41203753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 203
Target Start/End: Complemental strand, 47788014 - 47787927
Alignment:
Q  117 tgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatattattttcatc 203  Q
    |||| |||||||||| ||| || | |||||||| |||||||||||||| |||||| | |||||||||||||| |||| || |||||||    
T  47788014 tgtcccaaaataattaagtcatataacttttcaatacaatattaattactttttttcttttataactctaattaatactactttcatc 47787927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 170
Target Start/End: Original strand, 53848227 - 53848325
Alignment:
Q  71 ttactcccttcgtcccacgataaataagtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaattatttttt 170  Q
    ||||||||| | |||||  |||| | ||||||||||||||| | | ||||||| || ||||||   ||||||||||||| ||||||||||||||||||||    
T  53848227 ttactccctccatcccataataactgagtcatttgcaaaaaaatattgtctcagaa-aattgacccatttcacttttcaatacaatattaattatttttt 53848325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 137 - 203
Target Start/End: Original strand, 2906645 - 2906711
Alignment:
Q  137 atttcacttttcagtacaatattaattattttttccctttataactctaatcaatattattttcatc 203  Q
    ||||||||||||| || || |||||||||||||| |   |||||||||||| |||||||||||||||    
T  2906645 atttcacttttcaatataacattaattatttttttcaaatataactctaattaatattattttcatc 2906711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 201
Target Start/End: Original strand, 42132733 - 42132838
Alignment:
Q  97 agtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatatta 195  Q
    |||||||||||||||   | |||| | ||| |||||| || |||||| ||||| |||||||||||||| ||||||||  ||||||| ||||| |||||||    
T  42132733 agtcatttgcaaaaaattattgtcccgaaaaaattgacttgtttcacatttcaatacaatattaattacttttttccaattataacactaattaatatta 42132832  T
Q  196 ttttca 201  Q
     |||||    
T  42132833 ctttca 42132838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 203
Target Start/End: Original strand, 38319862 - 38319938
Alignment:
Q  128 aattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatattattttcatc 203  Q
    |||||| | ||||||||||||| |||||||||||||| ||||||||  ||||||| ||||| |||| || |||||||    
T  38319862 aattgactcatttcacttttcaatacaatattaattacttttttccaattataacactaattaatactactttcatc 38319938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 192
Target Start/End: Complemental strand, 38861403 - 38861323
Alignment:
Q  113 aaagtgtctcaaaataattgagttatttcacttttcagtacaatattaattatt-ttttccctttataactctaatcaata 192  Q
    |||||||  |||||||| ||||| ||||||||| ||| ||||  |||||||||| |||||  |||||||||||||||||||    
T  38861403 aaagtgttccaaaataaatgagtcatttcacttctcaatacatcattaattatttttttcagtttataactctaatcaata 38861323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 203
Target Start/End: Original strand, 38976966 - 38977018
Alignment:
Q  152 acaatattaatta-ttttttccctttataactctaatcaatattattttcatc 203  Q
    ||||||||||||| ||||||||||||||||||||||| |||| || |||||||    
T  38976966 acaatattaattacttttttccctttataactctaattaatactactttcatc 38977018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 171
Target Start/End: Complemental strand, 388576 - 388533
Alignment:
Q  128 aattgagttatttcacttttcagtacaatattaattattttttc 171  Q
    |||||| ||||||||||||||| |||||||||||||| ||||||    
T  388576 aattgacttatttcacttttcaatacaatattaattactttttc 388533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 170
Target Start/End: Complemental strand, 3503216 - 3503169
Alignment:
Q  123 aaaataattgagttatttcacttttcagtacaatattaattatttttt 170  Q
    ||||||||| |  |||||||||||||| ||||||||||||||||||||    
T  3503216 aaaataatttatatatttcacttttcaatacaatattaattatttttt 3503169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 203
Target Start/End: Complemental strand, 22496824 - 22496757
Alignment:
Q  137 atttcacttttcagtacaatattaattattttttccc-tttataactctaatcaatattattttcatc 203  Q
    |||| |||||| | || |||||||||||||||||||| |||||||||||||| |||| || |||||||    
T  22496824 attttactttttaatataatattaattattttttcccctttataactctaattaatactactttcatc 22496757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 201
Target Start/End: Complemental strand, 29815269 - 29815179
Alignment:
Q  113 aaagtgtctcaaaataattgagttatttcacttttcagtacaatatta--attattttttccctttataactctaatcaatattattttca 201  Q
    ||||||||  |||||||  |||| ||||||||||||| ||||||||||  ||| ||||| |  |||||||||||||| ||||||| |||||    
T  29815269 aaagtgtcaaaaaataacggagtcatttcacttttcaatacaatattattattttttttcctttttataactctaattaatattactttca 29815179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 203
Target Start/End: Original strand, 32559123 - 32559190
Alignment:
Q  137 atttcacttttcagtacaatattaattattttttccc-tttataactctaatcaatattattttcatc 203  Q
    |||| |||||||| |||||||||||||| ||| |||| |||||||||||||| |||| || |||||||    
T  32559123 attttacttttcaatacaatattaattactttctcccttttataactctaattaatactactttcatc 32559190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 203
Target Start/End: Complemental strand, 39258438 - 39258352
Alignment:
Q  123 aaaataattgagttatttcacttttcagtacaata------ttaattattttttccctttataactctaatcaatattattttcatc 203  Q
    ||||||||||||| ||||||||| | | |||||||      ||||||||||||||||||||||||| |||| |||| || |||||||    
T  39258438 aaaataattgagtcatttcacttattaatacaatactctaattaattattttttccctttataactttaattaataatactttcatc 39258352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 203
Target Start/End: Original strand, 41436441 - 41436508
Alignment:
Q  137 atttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatattattttcatc 203  Q
    ||||||||||||| |||||||||||||| |||||||   ||||||||||||| |||| || |||||||    
T  41436441 atttcacttttcaatacaatattaattatttttttctaattataactctaattaatactactttcatc 41436508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 170
Target Start/End: Complemental strand, 43335184 - 43335137
Alignment:
Q  123 aaaataattgagttatttcacttttcagtacaatattaattatttttt 170  Q
    ||||||| ||| ||||||||||||||| |||||||||||||| |||||    
T  43335184 aaaataactgatttatttcacttttcaatacaatattaattacttttt 43335137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 203
Target Start/End: Complemental strand, 55360497 - 55360428
Alignment:
Q  137 atttcacttttcagtacaatattaatta---ttttttccctttataactctaatcaatattattttcatc 203  Q
    ||||||||||||| ||||||||||||||   |||||| |  ||||||||||||| ||||||| |||||||    
T  55360497 atttcacttttcaatacaatattaattactttttttttcaattataactctaattaatattactttcatc 55360428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 203
Target Start/End: Complemental strand, 22872530 - 22872468
Alignment:
Q  142 acttttcagtacaatattaatta-ttttttccctttataactctaatcaatattattttcatc 203  Q
    |||||||| | |||||||||||| ||||||||  ||||||||||||| ||||||| |||||||    
T  22872530 acttttcaatgcaatattaattacttttttccaattataactctaattaatattactttcatc 22872468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 170
Target Start/End: Complemental strand, 36047289 - 36047215
Alignment:
Q  97 agtcatttgcaaaaataa-agtgtctcaaaataattgagttatttcacttttcagtacaatattaattatttttt 170  Q
    |||||||||||| || || | ||||||| || |||||| | ||||||||||||| |||||||||||||| |||||    
T  36047289 agtcatttgcaagaaaaatattgtctcagaaaaattgactcatttcacttttcaatacaatattaattacttttt 36047215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 202
Target Start/End: Complemental strand, 42670517 - 42670451
Alignment:
Q  137 atttcacttttcagtacaatattaattat-tttttccctttataactctaatcaatattattttcat 202  Q
    ||||||| ||||| ||||||||||||||  ||||| ||||||||||| |||| ||||||| ||||||    
T  42670517 atttcacctttcaatacaatattaattacattttttcctttataactttaattaatattactttcat 42670451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 186
Target Start/End: Original strand, 43420920 - 43421034
Alignment:
Q  72 tactcccttcgtcccacgataaataagtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaat--attaattattttt 169  Q
    |||||||| |||||||| |||| | | || |||||||||| ||| |||  |||||||| ||||  ||||||||||||| ||||||  |||| || |||||    
T  43420920 tactccctccgtcccacaataactgattcttttgcaaaaaaaaaatgttccaaaataactgagccatttcacttttcaatacaatacattactttttttt 43421019  T
Q  170 tccctttataactctaa 186  Q
    |  ||||||||||||||    
T  43421020 t--ctttataactctaa 43421034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 164
Target Start/End: Complemental strand, 54339346 - 54339300
Alignment:
Q  118 gtctcaaaataattgagttatttcacttttcagtacaatattaatta 164  Q
    |||||||||||||||| ||||||||||||| | | ||||||||||||    
T  54339346 gtctcaaaataattgatttatttcactttttaatgcaatattaatta 54339300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 137 - 201
Target Start/End: Original strand, 28279797 - 28279862
Alignment:
Q  137 atttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatattattttca 201  Q
    ||||||||||||| ||||| |||||||| |||||| |  ||||||||||||| |||| ||||||||    
T  28279797 atttcacttttcaatacaacattaattactttttttcaattataactctaattaatactattttca 28279862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 137 - 170
Target Start/End: Complemental strand, 38160301 - 38160268
Alignment:
Q  137 atttcacttttcagtacaatattaattatttttt 170  Q
    ||||||||||||| ||||||||||||||||||||    
T  38160301 atttcacttttcaatacaatattaattatttttt 38160268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 203
Target Start/End: Complemental strand, 4360619 - 4360488
Alignment:
Q  72 tactcccttcgtcccacgataaataagtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-tttttt 170  Q
    |||||||| |||||||  |||| | || ||||| |||||| | | |||| ||||| ||||||   ||||||||||||| ||||| |||||||| ||||||    
T  4360619 tactccctccgtcccataataactgagccatttacaaaaaaatattgtcacaaaa-aattgaccaatttcacttttcaatacaacattaattactttttt 4360521  T
Q  171 ccctttataactctaatcaatattattttcatc 203  Q
    ||   |||||||||||| |||| || |||||||    
T  4360520 ccaaatataactctaattaatactactttcatc 4360488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 171
Target Start/End: Complemental strand, 21954916 - 21954816
Alignment:
Q  72 tactcccttcgtcccacgataaataagtcatttgcaaaaataa-agtgtctcaaaataattgagttatttcacttttcagtacaatattaattatttttt 170  Q
    |||||||| ||| |||  |||| | ||||||||||||||| || | |||| ||||| ||||||   ||||||||||||| |||| |||||||| ||||||    
T  21954916 tactccctccgtaccataataagtgagtcatttgcaaaaaaaatattgtcccaaaaaaattgaccaatttcacttttcaatacattattaattttttttt 21954817  T
Q  171 c 171  Q
    |    
T  21954816 c 21954816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 192
Target Start/End: Original strand, 26185118 - 26185205
Alignment:
Q  107 aaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta--ttttttccctttataactctaatcaata 192  Q
    ||||| ||||||||  ||||||| ||||  ||||||| ||||| ||||  ||||||||  ||||||| ||||||||||||||| ||||    
T  26185118 aaaaaaaaagtgtccaaaaataagtgagccatttcacctttcaatacatcattaattattttttttctctttataactctaattaata 26185205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 182
Target Start/End: Complemental strand, 42738493 - 42738433
Alignment:
Q  123 aaaataattgagttatttcacttttcagtacaatattaattat-tttttccctttataact 182  Q
    |||| |||||| | ||||||||||||| ||||||||||||||| |||||||  ||||||||    
T  42738493 aaaaaaattgactcatttcacttttcaatacaatattaattatctttttccaattataact 42738433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 68; Significance: 2e-30; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 72 - 203
Target Start/End: Original strand, 3725082 - 3725213
Alignment:
Q  72 tactcccttcgtcccacgataaataagtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaattattttttc 171  Q
    |||||||| |||||||  |||| | | |||||||||| || ||||||||  ||||||| ||||| ||||||||||||| ||||||||||||| |||||||    
T  3725082 tactccctccgtcccataataactgaatcatttgcaataaaaaagtgtcctaaaataactgagtcatttcacttttcaatacaatattaatttttttttc 3725181  T
Q  172 cctttataactctaatcaatattattttcatc 203  Q
    |||||||||||||||| ||||||| |||||||    
T  3725182 cctttataactctaattaatattactttcatc 3725213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 71 - 201
Target Start/End: Complemental strand, 22583086 - 22582954
Alignment:
Q  71 ttactcccttcgtcccacgataaataagtcatttgcaaaaataaa-gtgtctcaaaataattgagttatttcacttttcagtacaatattaattatt-tt 168  Q
    ||||||||| |||||||| |||| ||||||||||||||||| ||| |||||   |||||| |||||||||||| |||||| |||||||||||||||| ||    
T  22583086 ttactccctccgtcccacaataactaagtcatttgcaaaaaaaaatgtgtccttaaataactgagttatttcaattttcaatacaatattaattattttt 22582987  T
Q  169 ttccctttataactctaatcaatattattttca 201  Q
    ||  ||||||||||||||| |||| || |||||    
T  22582986 ttttctttataactctaattaatactactttca 22582954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 71 - 201
Target Start/End: Original strand, 39008024 - 39008154
Alignment:
Q  71 ttactcccttcgtcccacgataaataagtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttt 169  Q
    ||||||||| |||||||| |||| | ||| ||||||||||| ||| ||||  ||||||| | ||| ||||||||||||| |||||||||||||| |||||    
T  39008024 ttactccctccgtcccacaataactgagttatttgcaaaaaaaaa-tgtcctaaaataactaagtcatttcacttttcaatacaatattaattatttttt 39008122  T
Q  170 tccctttataactctaatcaatattattttca 201  Q
    |||||||||||||||||| |||| || |||||    
T  39008123 tccctttataactctaattaatactactttca 39008154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 72 - 201
Target Start/End: Complemental strand, 4044690 - 4044560
Alignment:
Q  72 tactcccttcgtcccacgataaataagtcatttgcaaaa-ataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaattatttttt 170  Q
    |||||||| |||||||  |||| | |||||||||||||| | ||| |||| |||||||||||| | ||||||||||||| |||||||||||||| |||||    
T  4044690 tactccctccgtcccataataactgagtcatttgcaaaataaaaaatgtcccaaaataattgaatcatttcacttttcaatacaatattaattacttttt 4044591  T
Q  171 ccctttataactctaatcaatattattttca 201  Q
     ||||||||| | |||| |||| ||||||||    
T  4044590 tcctttataaatttaattaataatattttca 4044560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 119 - 203
Target Start/End: Original strand, 13716952 - 13717037
Alignment:
Q  119 tctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatattattttcatc 203  Q
    ||||||||||| ||||| |||| | |||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  13716952 tctcaaaataactgagtcattttatttttcaatacaatattaattacttttttccctttataactctaattaatattattttcatc 13717037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 71 - 201
Target Start/End: Complemental strand, 42575852 - 42575721
Alignment:
Q  71 ttactcccttcgtcccacgataaataagtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttt 169  Q
    ||||||||| |||||||| |||| | || |||||| ||||  |||||||| ||||||||  |||  ||||||||||||| |||||||||||||| |||||    
T  42575852 ttactccctccgtcccacaataactgagccatttgtaaaagaaaagtgtcccaaaataaccgagccatttcacttttcaatacaatattaattacttttt 42575753  T
Q  170 tccctttataactctaatcaatattattttca 201  Q
    ||||||||||||| |||| |||| || |||||    
T  42575752 tccctttataactttaattaatactactttca 42575721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 117 - 203
Target Start/End: Original strand, 15814603 - 15814688
Alignment:
Q  117 tgtctcaaaataattgagttatttcacttttcagtacaatattaattattttttccctttataactctaatcaatattattttcatc 203  Q
    ||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||  ||||||||||||||| |||| || |||||||    
T  15814603 tgtctcaaaataactgagtcatttcacttttcaatacaatattaattatttttt-tctttataactctaattaatactactttcatc 15814688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 123 - 203
Target Start/End: Original strand, 4412329 - 4412410
Alignment:
Q  123 aaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatattattttcatc 203  Q
    ||||||| | ||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||| ||||||||||    
T  4412329 aaaataactaagtcatttcacttttcaatacaatattaattacttttttccctttataactctaattaatactattttcatc 4412410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 72 - 203
Target Start/End: Original strand, 6610730 - 6610864
Alignment:
Q  72 tactcccttcgtcccacgataaataagtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta---tttt 168  Q
    |||||||| |||||||  |||| | |||||||| |||||| |||  ||| |||||||| ||||| ||||||||||| | ||||||||||||||   ||||    
T  6610730 tactccctccgtcccataataactgagtcattttcaaaaaaaaaaagtcccaaaataactgagtcatttcacttttaaatacaatattaattactttttt 6610829  T
Q  169 ttccctttataactctaatcaatattattttcatc 203  Q
    ||| |||||||||| |||| ||||||| |||||||    
T  6610830 ttctctttataactttaattaatattactttcatc 6610864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 107 - 201
Target Start/End: Complemental strand, 35646267 - 35646172
Alignment:
Q  107 aaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatattattttca 201  Q
    ||||| |||||||||||| |||| ||||| ||||||||||||| ||| |||||||||| |||||||| |||||||||||||| |||| || |||||    
T  35646267 aaaaaaaaagtgtctcaatataactgagtcatttcacttttcaatacgatattaattacttttttccttttataactctaattaatactactttca 35646172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 107 - 203
Target Start/End: Complemental strand, 11099655 - 11099558
Alignment:
Q  107 aaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatattattttcatc 203  Q
    ||||| ||| |||| |||||||| ||||| |||||||||| || |||||||||||||| ||||| ||||||||||||||||| |||| || |||||||    
T  11099655 aaaaaaaaaatgtcccaaaataactgagtcatttcactttccaatacaatattaattactttttcccctttataactctaattaatactactttcatc 11099558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 131 - 203
Target Start/End: Original strand, 20189846 - 20189919
Alignment:
Q  131 tgagttatttcacttttcagtacaatattaattatttt-ttccctttataactctaatcaatattattttcatc 203  Q
    ||||| ||||||||||| | |||||||||||||||||| ||||||||||||||||||| ||||||| |||||||    
T  20189846 tgagtcatttcactttttaatacaatattaattatttttttccctttataactctaattaatattactttcatc 20189919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 72 - 201
Target Start/End: Complemental strand, 8369910 - 8369779
Alignment:
Q  72 tactcccttcgtcccacgataaataagtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaattatt--ttt 169  Q
    |||||||| |||||||| |||  | || |||||||||| | |||||||| |||||||| ||||  |||||| |||||| ||||||||||||||||  |||    
T  8369910 tactccctccgtcccacaatagctgagccatttgcaaataaaaagtgtcccaaaataactgagccatttcatttttcaatacaatattaattattttttt 8369811  T
Q  170 tccctttataactctaatcaatattattttca 201  Q
    | | |||||||||||||| |||| || |||||    
T  8369810 ttcttttataactctaattaatactactttca 8369779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 123 - 203
Target Start/End: Complemental strand, 17243115 - 17243035
Alignment:
Q  123 aaaataattgagttatttcacttttcagtacaatattaattattttttccctttataactctaatcaatattattttcatc 203  Q
    ||||||| ||||||||||||||||| | ||||  |||||||| |||||||||||||||||||||| |||| || |||||||    
T  17243115 aaaataagtgagttatttcactttttaatacatcattaattactttttccctttataactctaattaatactactttcatc 17243035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 71 - 201
Target Start/End: Original strand, 15898086 - 15898216
Alignment:
Q  71 ttactcccttcgtcccacgataaataagtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaattatttttt 170  Q
    ||||||||||| |||||  |||| | ||  ||||||||||| | | ||| ||| || |||||| ||||||||||||||| |||||||||||||| |||||    
T  15898086 ttactcccttcatcccataataactgagctatttgcaaaaaaatattgtttcagaaaaattgacttatttcacttttcaatacaatattaattacttttt 15898185  T
Q  171 ccctttataactctaatcaatattattttca 201  Q
     |  ||||||| ||||| ||||||| |||||    
T  15898186 tcaattataacactaattaatattactttca 15898216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 107 - 203
Target Start/End: Original strand, 41184047 - 41184144
Alignment:
Q  107 aaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatattattttcatc 203  Q
    ||||| |||||||  |||||||| ||||| |||| |||||||| ||||||||||||||  ||||| | |||||||||||||| ||||||| |||||||    
T  41184047 aaaaaaaaagtgttccaaaataactgagtgattttacttttcaatacaatattaattacattttttcatttataactctaattaatattactttcatc 41184144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 122 - 201
Target Start/End: Complemental strand, 8692981 - 8692901
Alignment:
Q  122 caaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatattattttca 201  Q
    ||||||||  |||| |||||| |||||| |||||||||||||| |||||| |||||||||||||||| ||||||| |||||    
T  8692981 caaaataaccgagtcatttcatttttcaatacaatattaattactttttttcctttataactctaattaatattactttca 8692901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 187
Target Start/End: Original strand, 13135684 - 13135764
Alignment:
Q  108 aaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaat 187  Q
    |||| ||||||||  |||||||| |||| ||||||||||||| ||||||||||| || |||||||||||||||||| ||||    
T  13135684 aaaaaaaagtgtcaaaaaataatcgagtcatttcacttttcaatacaatattaaatatttttttccctttataactttaat 13135764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 203
Target Start/End: Complemental strand, 35334703 - 35334607
Alignment:
Q  108 aaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaattatt-ttttccctttataactctaatcaatattattttcatc 203  Q
    |||| |||||||| |||||||| ||||  ||||||||||||| ||||  |||||||||| |||||| |||||||||||||| |||| || |||||||    
T  35334703 aaaaaaaagtgtcccaaaataagtgagccatttcacttttcaatacatcattaattatttttttccttttataactctaattaatactactttcatc 35334607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 97 - 203
Target Start/End: Original strand, 33012274 - 33012381
Alignment:
Q  97 agtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatatta 195  Q
    ||||||||||||||| ||||| || |||||||  ||||  ||||||||||||| | |||||||||||| ||||||| ||||||||| ||| | |||| ||    
T  33012274 agtcatttgcaaaaacaaagtatcccaaaatatctgagccatttcacttttcaatgcaatattaattacttttttctctttataacgctagttaatacta 33012373  T
Q  196 ttttcatc 203  Q
     |||||||    
T  33012374 ctttcatc 33012381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 113 - 202
Target Start/End: Original strand, 33988135 - 33988226
Alignment:
Q  113 aaagtgtctcaaaataattgagtt-atttcacttttcagtacaatattaattattt-tttccctttataactctaatcaatattattttcat 202  Q
    |||||||| |||||||| |||||| ||||||||||||| ||||  |||||||| || ||||||||||||||||||||  |||||| ||||||    
T  33988135 aaagtgtcccaaaataagtgagtttatttcacttttcaatacatcattaattacttgtttccctttataactctaattcatattactttcat 33988226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 123 - 184
Target Start/End: Original strand, 7276329 - 7276391
Alignment:
Q  123 aaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactct 184  Q
    ||||||| |||||||||| |||||||| |||||||||||||| ||||||| ||||||||||||    
T  7276329 aaaataactgagttattttacttttcaatacaatattaattacttttttcactttataactct 7276391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 100 - 162
Target Start/End: Complemental strand, 41686676 - 41686614
Alignment:
Q  100 catttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaat 162  Q
    |||||| |||||||||||||| |||||||| ||||| ||||||||||||| |||||| |||||    
T  41686676 catttgtaaaaataaagtgtcccaaaataactgagtcatttcacttttcaatacaattttaat 41686614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 203
Target Start/End: Original strand, 858281 - 858362
Alignment:
Q  123 aaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatattattttcatc 203  Q
    |||||||  |||| ||||||| ||||| |||||||||||||| |||||| |||||||||||||||| |||| || |||||||    
T  858281 aaaataaccgagtcatttcacatttcaatacaatattaattacttttttacctttataactctaattaatactactttcatc 858362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 195
Target Start/End: Original strand, 25814310 - 25814383
Alignment:
Q  123 aaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatatta 195  Q
    ||||||| ||| | ||||||||||||| |||||||||||||| |||||||| ||||||||| |||| |||||||    
T  25814310 aaaataactgaatcatttcacttttcaatacaatattaattacttttttccttttataactttaattaatatta 25814383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 195
Target Start/End: Original strand, 34534847 - 34534941
Alignment:
Q  100 catttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaattattttttccctttataactctaatcaatatta 195  Q
    ||||| |||||| | | |||| ||||| |||||| | | ||||||||||| |||||||||||||||||||| |  ||||||||||||| |||||||    
T  34534847 catttacaaaaaaatattgtcccaaaaaaattgattcagttcacttttcaatacaatattaattatttttt-caattataactctaattaatatta 34534941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 90 - 195
Target Start/End: Original strand, 7613620 - 7613726
Alignment:
Q  90 ataaataagtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatc 188  Q
    |||||| || |||||||||||| ||| |||  |||||||| | |   ||||||||||| | |||||||||||||| |||||| ||||||||||| ||||     
T  7613620 ataaatgagccatttgcaaaaaaaaaatgttccaaaataactaaaccatttcactttttaatacaatattaattactttttttcctttataactataatt 7613719  T
Q  189 aatatta 195  Q
    |||||||    
T  7613720 aatatta 7613726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 202
Target Start/End: Original strand, 14259611 - 14259693
Alignment:
Q  121 tcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatattattttcat 202  Q
    ||||||||| ||| | |||||| |||||| || ||||||||||| |||||||| ||||||| |||||| ||||||| ||||||    
T  14259611 tcaaaataactgattcatttcatttttcaatataatattaattacttttttccttttataattctaattaatattaatttcat 14259693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 117 - 171
Target Start/End: Complemental strand, 36446845 - 36446791
Alignment:
Q  117 tgtctcaaaataattgagttatttcacttttcagtacaatattaattattttttc 171  Q
    ||||| ||||||||||| | |||||| |||||| |||||||||||||||||||||    
T  36446845 tgtcttaaaataattgattcatttcatttttcaatacaatattaattattttttc 36446791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 72 - 185
Target Start/End: Complemental strand, 39060628 - 39060511
Alignment:
Q  72 tactcccttcgtcccacgataaataagtcatttgcaa--aaataaagtgtctcaaaataattgagttatttcacttttc-agtacaatattaatta-ttt 167  Q
    |||||||| |||||||  |||| | |||||||| |||  ||| ||||||| ||||||||| |||| ||||||||||||| | |||||||||||||| |||    
T  39060628 tactccctccgtcccataataattgagtcattttcaataaaaaaaagtgtttcaaaataactgagctatttcacttttcaaatacaatattaattacttt 39060529  T
Q  168 tttccctttataactcta 185  Q
    | |||  |||||||||||    
T  39060528 tgtccaattataactcta 39060511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 201
Target Start/End: Complemental strand, 5357989 - 5357900
Alignment:
Q  113 aaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatattattttca 201  Q
    |||||||| |||||||| || || |||||||||| || |||| ||||||||| |||||||   ||||||||||||| ||||||| |||||    
T  5357989 aaagtgtcccaaaataactgtgtcatttcactttccaatacagtattaattacttttttcaaattataactctaattaatattactttca 5357900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 170
Target Start/End: Original strand, 20369196 - 20369268
Alignment:
Q  97 agtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaattatttttt 170  Q
    ||||||||| ||||| | |||||| ||||| |||||| | ||||||||||||| |||||||||||||| |||||    
T  20369196 agtcatttgtaaaaa-atagtgtcccaaaaaaattgactcatttcacttttcaatacaatattaattacttttt 20369268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 201
Target Start/End: Complemental strand, 36007039 - 36006975
Alignment:
Q  136 tatttcacttttcagtacaatattaattattttttccctttataactctaatcaatattattttca 201  Q
    |||||||||||||| ||||| ||| ||||||||| ||  ||||||||||||| |||||||||||||    
T  36007039 tatttcacttttcaatacaacatttattattttt-ccaattataactctaattaatattattttca 36006975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 170
Target Start/End: Complemental strand, 36469266 - 36469213
Alignment:
Q  117 tgtctcaaaataattgagttatttcacttttcagtacaatattaattatttttt 170  Q
    ||||| ||||||||||| | |||||| |||||| ||||||||||||||||||||    
T  36469266 tgtcttaaaataattgattcatttcatttttcaatacaatattaattatttttt 36469213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 203
Target Start/End: Complemental strand, 13422513 - 13422433
Alignment:
Q  123 aaaataattgagttatttcacttttcagtacaatattaattattttttccctttataactctaatcaatattattttcatc 203  Q
    ||||||| ||| | ||||||||||||| |||||||||||||||| |||    |||||||| |||| ||||||| |||||||    
T  13422513 aaaataactgattcatttcacttttcaatacaatattaattattatttttaattataactataattaatattactttcatc 13422433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 202
Target Start/End: Complemental strand, 14184197 - 14184130
Alignment:
Q  137 atttcacttttcagtacaatattaatta--ttttttccctttataactctaatcaatattattttcat 202  Q
    ||||||||||||| ||||||||||||||  ||||||||  |||||||| |||| ||||| ||||||||    
T  14184197 atttcacttttcaatacaatattaattactttttttccaattataactataattaatatcattttcat 14184130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 195
Target Start/End: Original strand, 32659776 - 32659835
Alignment:
Q  135 ttatttcacttttcagtacaatattaattattttttccctttataactctaatcaatatta 195  Q
    |||||| |||||||| |||||||||||||||||||| |  ||||||||||||| |||||||    
T  32659776 ttattttacttttcaatacaatattaattatttttt-cgattataactctaataaatatta 32659835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 203
Target Start/End: Complemental strand, 35585764 - 35585697
Alignment:
Q  138 tttcacttttcagtacaatattaatta--ttttttccctttataactctaatcaatattattttcatc 203  Q
    |||||||||||| ||||||||||||||  |||||| |  |||||||| |||||||||||| |||||||    
T  35585764 tttcacttttcaatacaatattaattacttttttttcaattataactttaatcaatattactttcatc 35585697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 203
Target Start/End: Original strand, 42211246 - 42211360
Alignment:
Q  90 ataaataagtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta--ttttttccctttataactctaat 187  Q
    |||||| ||||||||||| ||| ||| |||| |||||||| ||||| ||||||||||| | |||||| ||| |||  || ||| |||||||||||| |||    
T  42211246 ataaatgagtcatttgcacaaaaaaaatgtc-caaaataactgagtcatttcacttttgaatacaatcttatttactttgttttcctttataactcaaat 42211344  T
Q  188 caatattattttcatc 203  Q
     |||| || |||||||    
T  42211345 taatactactttcatc 42211360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 170
Target Start/End: Complemental strand, 9426715 - 9426668
Alignment:
Q  123 aaaataattgagttatttcacttttcagtacaatattaattatttttt 170  Q
    ||||||||||| | ||||||||||||| |||||||||||||| |||||    
T  9426715 aaaataattgactcatttcacttttcaatacaatattaattacttttt 9426668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 170
Target Start/End: Original strand, 13597975 - 13598022
Alignment:
Q  123 aaaataattgagttatttcacttttcagtacaatattaattatttttt 170  Q
    ||||||||||| | ||||||||||||| |||||||||||||| |||||    
T  13597975 aaaataattgactcatttcacttttcaatacaatattaattacttttt 13598022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 203
Target Start/End: Complemental strand, 39183767 - 39183708
Alignment:
Q  144 ttttcagtacaatattaattattttttccctttataactctaatcaatattattttcatc 203  Q
    |||||| |||||||||||||| ||||| |  ||||||||||||| ||||||| |||||||    
T  39183767 ttttcaatacaatattaattacttttttcaattataactctaattaatattactttcatc 39183708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 170
Target Start/End: Original strand, 24230842 - 24230896
Alignment:
Q  116 gtgtctcaaaataattgagttatttcacttttcagtacaatattaattatttttt 170  Q
    |||||||||||||| ||| |||||| | |||| | ||||||||||||||||||||    
T  24230842 gtgtctcaaaataactgacttattttattttttaatacaatattaattatttttt 24230896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 30437913 - 30437831
Alignment:
Q  113 aaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatatt 194  Q
    ||||| |||||||| || ||||| ||||||||||| | |||||||||||||| ||||||    ||||||||||||| ||||||    
T  30437913 aaagtatctcaaaacaactgagtcatttcacttttaaatacaatattaattacttttttttaattataactctaattaatatt 30437831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 201
Target Start/End: Original strand, 42818863 - 42818929
Alignment:
Q  136 tatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatattattttca 201  Q
    |||||||||||||| || ||||||||||| |||||| |  ||||||||||||| |||| ||||||||    
T  42818863 tatttcacttttcaatataatattaattactttttttcaattataactctaattaatactattttca 42818929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 172
Target Start/End: Original strand, 791942 - 791978
Alignment:
Q  136 tatttcacttttcagtacaatattaattattttttcc 172  Q
    |||||||||||||| || |||||||||||||||||||    
T  791942 tatttcacttttcaatagaatattaattattttttcc 791978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 201
Target Start/End: Original strand, 10044629 - 10044693
Alignment:
Q  137 atttcacttttcagtacaatattaattattttttccctttataactctaatcaatattattttca 201  Q
    ||||||||||||| ||||| |||||||| |||||    ||||||||||||| ||||||| |||||    
T  10044629 atttcacttttcaatacaacattaattactttttttaattataactctaattaatattactttca 10044693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 2e-30; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 97 - 203
Target Start/End: Original strand, 27698732 - 27698839
Alignment:
Q  97 agtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatatta 195  Q
    |||||||| |||||| ||||||||  ||||||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||    
T  27698732 agtcatttacaaaaaaaaagtgtcctaaaataattgagtcatttcacttttcaatacaatattaattacttttttccctttataactctaattaatatta 27698831  T
Q  196 ttttcatc 203  Q
     |||||||    
T  27698832 ctttcatc 27698839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 100 - 203
Target Start/End: Complemental strand, 49494347 - 49494244
Alignment:
Q  100 catttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaattattttttccctttataactctaatcaatattatttt 199  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||| |||| ||||||||| ||||| ||||||||||| |||| ||||||| |||    
T  49494347 catttgcaaaaataaagtgtctcaaaataatcgagtcatttcacttttcaatacactattaattacttttttcctttataactttaattaatattacttt 49494248  T
Q  200 catc 203  Q
    ||||    
T  49494247 catc 49494244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 68 - 201
Target Start/End: Complemental strand, 4466371 - 4466237
Alignment:
Q  68 attttactcccttcgtcccacgataaataagtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaattatt- 166  Q
    ||||||||||||  || |||  |||| |||||||||| ||| || ||||||||||||||||||||||| |||||||||| || ||||||||||||||||     
T  4466371 attttactccctctgttccataataactaagtcattttcaataaaaaagtgtctcaaaataattgagtcatttcactttccaatacaatattaattattt 4466272  T
Q  167 ttttccctttataactctaatcaatattattttca 201  Q
    ||||||  ||||||||||||| |||| || |||||    
T  4466271 ttttccaattataactctaattaatactactttca 4466237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 101 - 192
Target Start/End: Original strand, 17342752 - 17342844
Alignment:
Q  101 atttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaata 192  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| | ||||  | ||||||||||||| ||||    
T  17342752 atttgcaaaaataaagtgtctcaaaataactgagttatttcacttttcaatacaatattaattactattttttcattataactctaattaata 17342844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 97 - 203
Target Start/End: Complemental strand, 36467382 - 36467276
Alignment:
Q  97 agtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatatta 195  Q
    ||||||||||||||| ||||||| ||||||| | ||||| ||||||||||||| |||||||||||||| ||||| ||||||||||||| ||| |||| ||    
T  36467382 agtcatttgcaaaaa-aaagtgtttcaaaatgactgagtcatttcacttttcaatacaatattaattactttttcccctttataactcaaattaatacta 36467284  T
Q  196 ttttcatc 203  Q
    ||||||||    
T  36467283 ttttcatc 36467276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 107 - 199
Target Start/End: Original strand, 43895777 - 43895870
Alignment:
Q  107 aaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaattattttttcc-ctttataactctaatcaatattatttt 199  Q
    ||||| ||| ||||||||||||| ||||| ||||||||||||| |||||||||||||| ||||||| ||||| ||||||||| |||||||||||    
T  43895777 aaaaaaaaaatgtctcaaaataaatgagtcatttcacttttcaatacaatattaattactttttcctctttacaactctaattaatattatttt 43895870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 100 - 192
Target Start/End: Complemental strand, 2219631 - 2219540
Alignment:
Q  100 catttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaattattttttccctttataactctaatcaata 192  Q
    |||||||||||||||  |||| ||||||||||||   ||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||    
T  2219631 catttgcaaaaataat-tgtcccaaaataattgaaccatttcacttttcaatacaatattaattactttttccctttataactctaattaata 2219540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 125 - 192
Target Start/End: Complemental strand, 7785433 - 7785366
Alignment:
Q  125 aataattgagttatttcacttttcagtacaatattaattattttttccctttataactctaatcaata 192  Q
    ||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  7785433 aataactgagtcatttcacttttcaatacaatattaattattttttccctttataactctaattaata 7785366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 113 - 203
Target Start/End: Complemental strand, 17724886 - 17724795
Alignment:
Q  113 aaagtgtctcaaaataattgagttatttcacttttcagtacaatattaattatttt-ttccctttataactctaatcaatattattttcatc 203  Q
    ||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||  ||  |||||||||||||| |||| ||||||||||    
T  17724886 aaagtgtctcaaaataattgagtcatttcatttttcaatacaatattaattattttaatctttttataactctaattaatactattttcatc 17724795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 113 - 203
Target Start/End: Original strand, 46536276 - 46536367
Alignment:
Q  113 aaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatattattttcatc 203  Q
    ||||||||||||||||| ||||| ||||||||||||| ||||||||||||||  ||||||||| |||||||||||| |||| || |||||||    
T  46536276 aaagtgtctcaaaataactgagtcatttcacttttcaatacaatattaattacatttttccctctataactctaattaatactactttcatc 46536367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 123 - 203
Target Start/End: Complemental strand, 10370349 - 10370268
Alignment:
Q  123 aaaataattgagttatttcacttttcagtacaatattaattatt-ttttccctttataactctaatcaatattattttcatc 203  Q
    ||||||| |||| ||||||||||| || |||||||||||||||| ||||||||||||||||||||| ||||||| |||||||    
T  10370349 aaaataactgagctatttcactttccaatacaatattaattatttttttccctttataactctaattaatattactttcatc 10370268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 32347836 - 32347960
Alignment:
Q  69 ttttactcccttcgtcccacgataaataagtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttt 167  Q
    ||||||||||| |||||||  |||| |||| ||||| ||| || ||| |||| ||| |||| |||| |||||||||||||| ||||  |||||||| |||    
T  32347836 ttttactccctccgtcccataataactaagccattttcaataaaaaattgtcccaatataagtgagctatttcacttttcaatacatcattaattacttt 32347935  T
Q  168 tttccctttataactctaatcaata 192  Q
    |||||||||||||||||||| ||||    
T  32347936 tttccctttataactctaattaata 32347960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 97 - 203
Target Start/End: Original strand, 8773158 - 8773269
Alignment:
Q  97 agtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-----ttttttccctttataactctaatcaat 191  Q
    ||||||||||||||| |||||||| |||||||| |||| ||||||| |||||| || |||||||||||     |||||||| |||||||||||||| |||    
T  8773158 agtcatttgcaaaaaaaaagtgtcccaaaataactgagctatttcatttttcaatagaatattaattacttttttttttccttttataactctaattaat 8773257  T
Q  192 attattttcatc 203  Q
    | || |||||||    
T  8773258 actactttcatc 8773269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 97 - 203
Target Start/End: Complemental strand, 19533107 - 19533000
Alignment:
Q  97 agtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatatta 195  Q
    ||||||||||||||| |||   || |||||||| ||||| |||| |||||||| |||||||||||||| |||||||||||||||||| |||| |||| ||    
T  19533107 agtcatttgcaaaaaaaaaaaatcccaaaataactgagtcattttacttttcaatacaatattaattacttttttccctttataactttaattaatacta 19533008  T
Q  196 ttttcatc 203  Q
     |||||||    
T  19533007 ctttcatc 19533000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 102 - 203
Target Start/End: Complemental strand, 34877272 - 34877171
Alignment:
Q  102 tttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaattattttttccctttataactctaatcaatattattttca 201  Q
    |||||||||  |||||||   ||||||| ||| | |||| |||||||| |||||||||||||| |||||| | ||||||||||||| |||||||||||||    
T  34877272 tttgcaaaataaaagtgttctaaaataactgaatcattttacttttcaatacaatattaattactttttctcattataactctaattaatattattttca 34877173  T
Q  202 tc 203  Q
    ||    
T  34877172 tc 34877171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 121 - 201
Target Start/End: Original strand, 36784258 - 36784339
Alignment:
Q  121 tcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatattattttca 201  Q
    ||||||||| ||||| ||||||||||||| |||||||||||||| |||||| | ||||||||| |||| |||||||||||||    
T  36784258 tcaaaataactgagtcatttcacttttcaatacaatattaattactttttttcatttataactataattaatattattttca 36784339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 107 - 203
Target Start/End: Original strand, 38664331 - 38664428
Alignment:
Q  107 aaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatattattttcatc 203  Q
    ||||| ||||||||||||||||||||||| |||| | |||| | |||||||||||||| |||||||  |||||||||||||| |||| || |||||||    
T  38664331 aaaaaaaaagtgtctcaaaataattgagtcattttattttttaatacaatattaattatttttttctttttataactctaattaatactactttcatc 38664428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 99 - 203
Target Start/End: Original strand, 46495940 - 46496045
Alignment:
Q  99 tcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatattatt 197  Q
    |||||| ||| || ||||||||||||||||| ||||| |||||| |||||| ||||  |||||||| |||||| |||||||||||||||| |||| || |    
T  46495940 tcattttcaataaaaaagtgtctcaaaataagtgagtcatttcatttttcaatacatcattaattattttttttcctttataactctaattaatactact 46496039  T
Q  198 ttcatc 203  Q
    ||||||    
T  46496040 ttcatc 46496045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 113 - 204
Target Start/End: Complemental strand, 3555727 - 3555635
Alignment:
Q  113 aaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatattattttcatct 204  Q
    |||||||| |||||||| |||||||||||| |||||| ||||  |||||||| |||||||| |||||||||||||| |||| || ||||||||    
T  3555727 aaagtgtcccaaaataagtgagttatttcatttttcattacatcattaattacttttttccttttataactctaattaatactactttcatct 3555635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 100 - 203
Target Start/End: Original strand, 8327640 - 8327744
Alignment:
Q  100 catttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatattattt 198  Q
    ||||| ||| || |||||||| |||||||| ||||  ||||||||||||| ||||  |||||||| ||||||||||||||||||||||| |||| || ||    
T  8327640 cattttcaataaaaaagtgtcccaaaataaatgagccatttcacttttcaatacatcattaattacttttttccctttataactctaattaatactactt 8327739  T
Q  199 tcatc 203  Q
    |||||    
T  8327740 tcatc 8327744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 107 - 203
Target Start/End: Complemental strand, 45889426 - 45889329
Alignment:
Q  107 aaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatattattttcatc 203  Q
    ||||| |||||||| |||||||| ||||| ||||||||||||| |||   |||||||| |||||||| |||||||||||||| |||| || |||||||    
T  45889426 aaaaaaaaagtgtcccaaaataagtgagtcatttcacttttcaatacgtcattaattacttttttccttttataactctaattaatactactttcatc 45889329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 101 - 203
Target Start/End: Original strand, 26583652 - 26583755
Alignment:
Q  101 atttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatattatttt 199  Q
    ||||||||||| | | |||||||||| ||||||   ||||||||||||| |||||||||||||| ||| ||||  ||||||| ||||| |||| ||||||    
T  26583652 atttgcaaaaaaatattgtctcaaaaaaattgacccatttcacttttcaatacaatattaattactttattccaattataacactaattaataatatttt 26583751  T
Q  200 catc 203  Q
    ||||    
T  26583752 catc 26583755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 97 - 203
Target Start/End: Original strand, 28839259 - 28839366
Alignment:
Q  97 agtcatttgcaa-aaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaattattttttccctttataactctaatcaatatta 195  Q
    |||||||| ||| ||| |||||||  |||||||| ||||| ||||||||||||| ||||   ||||||| ||||||||||||||||| |||| |||| ||    
T  28839259 agtcattttcaataaaaaaagtgttccaaaataagtgagtcatttcacttttcaatacatatttaattactttttccctttataactataattaatacta 28839358  T
Q  196 ttttcatc 203  Q
     |||||||    
T  28839359 ctttcatc 28839366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 137 - 203
Target Start/End: Complemental strand, 30903375 - 30903308
Alignment:
Q  137 atttcacttttcagtacaatattaattattttttccct-ttataactctaatcaatattattttcatc 203  Q
    ||||||||||||| | |||||||||||||||||| ||  ||||||||||||| |||||||||||||||    
T  30903375 atttcacttttcaattcaatattaattatttttttccaattataactctaattaatattattttcatc 30903308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 72 - 201
Target Start/End: Original strand, 2886066 - 2886196
Alignment:
Q  72 tactcccttcgtcccacgataaataagtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-tttttt 170  Q
    |||||||| |||||||  |||| | ||||||||||||||| | | |||| || || ||||||   ||||||||||||| |||||||||||||| ||||||    
T  2886066 tactccctccgtcccataataactgagtcatttgcaaaaaaatattgtcccagaaaaattgatcaatttcacttttcaatacaatattaattactttttt 2886165  T
Q  171 ccctttataactctaatcaatattattttca 201  Q
    ||  ||||||| ||||| |||| || |||||    
T  2886166 ccaattataacactaattaatactactttca 2886196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 122 - 203
Target Start/End: Original strand, 28908038 - 28908120
Alignment:
Q  122 caaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatattattttcatc 203  Q
    |||||||||||||| ||||||||||| | |||  ||||||||| |||||| |||||||||||||||| |||| || |||||||    
T  28908038 caaaataattgagtcatttcactttttaatacggtattaattattttttttcctttataactctaataaatactactttcatc 28908120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 78 - 164
Target Start/End: Complemental strand, 37541324 - 37541238
Alignment:
Q  78 cttcgtcccacgataaataagtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta 164  Q
    ||||||||||  |||| | ||||||||||||||| | | ||||||| ||  ||||| ||||||||||||||| ||||||||||||||    
T  37541324 cttcgtcccataataactgagtcatttgcaaaaaaatattgtctcagaaagattgatttatttcacttttcaatacaatattaatta 37541238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 192
Target Start/End: Original strand, 49944721 - 49944806
Alignment:
Q  107 aaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaattattttttccctttataactctaatcaata 192  Q
    ||||| ||| ||||| |||||||  |||| ||||||| ||||| |||||||||||||| ||||| | |||||||||||||| ||||    
T  49944721 aaaaaaaaaatgtcttaaaataaccgagtcatttcacctttcaatacaatattaattacttttttcttttataactctaattaata 49944806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 203
Target Start/End: Complemental strand, 51749345 - 51749264
Alignment:
Q  123 aaaataattgagttatttcacttttcagtacaatattaattatttttt-ccctttataactctaatcaatattattttcatc 203  Q
    ||||||| ||||| |||||| |||||| || |  |||||||||||||| ||||||||||||||||| ||||||| |||||||    
T  51749345 aaaataagtgagtcatttcatttttcaatatatcattaattatttttttccctttataactctaattaatattactttcatc 51749264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 203
Target Start/End: Complemental strand, 52830575 - 52830494
Alignment:
Q  123 aaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatattattttcatc 203  Q
    ||||||| ||||| ||||||||||||| |||||||||||||| ||||||| |||||||| | |||| | ||||| |||||||    
T  52830575 aaaataactgagtcatttcacttttcaatacaatattaattacttttttctctttataattttaattagtattactttcatc 52830494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 118 - 201
Target Start/End: Original strand, 5442282 - 5442365
Alignment:
Q  118 gtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatattattttca 201  Q
    |||||||||||| |||| |||||||||||||| || || |||||||| |||||||| ||||||||| |||| ||||||| |||||    
T  5442282 gtctcaaaataactgagctatttcacttttcaatataa-attaattacttttttccttttataactataattaatattactttca 5442365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 203
Target Start/End: Original strand, 7787568 - 7787704
Alignment:
Q  72 tactcccttcgtcccacgataaataagtcatttgca----aaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-tt 166  Q
    |||||||| |||||||  |||| | |||||||||||    |||| ||| ||||| ||||||| ||||  |||||| |||||  |||||||||||||| ||    
T  7787568 tactccctccgtcccataataactgagtcatttgcacacaaaaaaaaaatgtctaaaaataactgagccatttcatttttcgatacaatattaattactt 7787667  T
Q  167 ttttccctttataactctaatcaatattattttcatc 203  Q
    ||| |||||||||||| |||| |||| ||||| ||||    
T  7787668 tttcccctttataactataattaatactatttccatc 7787704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 122 - 187
Target Start/End: Original strand, 6784948 - 6785014
Alignment:
Q  122 caaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaat 187  Q
    |||||||||||| | ||||||||||||| |||||||||||||| |||||| | |||||| |||||||    
T  6784948 caaaataattgaatcatttcacttttcaatacaatattaattactttttttcttttatatctctaat 6785014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 80 - 201
Target Start/End: Complemental strand, 24131605 - 24131483
Alignment:
Q  80 tcgtcccacgataaataagtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttat 178  Q
    ||||||||  |||| | ||||||||| ||||| ||  |||| || || |||||| ||||||||||||||| | |||||||||||| ||||||||  ||||    
T  24131605 tcgtcccataataactgagtcatttgtaaaaaaaatatgtcccagaaaaattgacttatttcacttttcaatgcaatattaattacttttttccaattat 24131506  T
Q  179 aactctaatcaatattattttca 201  Q
    ||| ||||| |||| || |||||    
T  24131505 aacactaattaatactactttca 24131483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 123 - 192
Target Start/End: Complemental strand, 28277200 - 28277130
Alignment:
Q  123 aaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaata 192  Q
    ||||||| ||||| |||||| |||| | |||||||||||||| ||||||| ||||||||||||||| ||||    
T  28277200 aaaataactgagtcatttcattttttaatacaatattaattacttttttctctttataactctaattaata 28277130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 195
Target Start/End: Complemental strand, 705527 - 705438
Alignment:
Q  107 aaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaattatt-ttttccctttataactctaatcaatatta 195  Q
    ||||| ||| |||| ||||| ||||||  |||||||||||||| || ||||||||||||| ||||||   |||||||||||| |||||||    
T  705527 aaaaaaaaattgtcccaaaagaattgatctatttcacttttcaatataatattaattatttttttccaaatataactctaattaatatta 705438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 192
Target Start/End: Complemental strand, 3719010 - 3718941
Alignment:
Q  123 aaaataattgagttatttcacttttcagtacaatattaattattttttccctttataactctaatcaata 192  Q
    ||||||| ||| | ||||||||||||| | ||||||||||||||||||||   |||||||||||| ||||    
T  3719010 aaaataagtgactcatttcacttttcaatgcaatattaattattttttccaactataactctaattaata 3718941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 203
Target Start/End: Complemental strand, 5040737 - 5040656
Alignment:
Q  123 aaaataattgagttatttcacttttcagtacaatattaatt-attttttccctttataactctaatcaatattattttcatc 203  Q
    |||||||| |||| ||||||||||| | |||||||||||||  ||||||||||||| |||| |||| | || ||||||||||    
T  5040737 aaaataatagagtcatttcactttttaatacaatattaattgcttttttccctttacaactttaattattactattttcatc 5040656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 201
Target Start/End: Original strand, 16039997 - 16040102
Alignment:
Q  97 agtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatatta 195  Q
    |||||||| ||| || ||| ||| | ||||||| ||||| |||||||||| || |||||||||||||| |||||| |  ||||||||||||  |||||||    
T  16039997 agtcattttcaataaaaaaatgttttaaaataactgagtcatttcactttccaatacaatattaattactttttttcaattataactctaaataatatta 16040096  T
Q  196 ttttca 201  Q
     |||||    
T  16040097 ctttca 16040102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 164
Target Start/End: Complemental strand, 50014797 - 50014756
Alignment:
Q  123 aaaataattgagttatttcacttttcagtacaatattaatta 164  Q
    ||||||||||| | ||||||||||||||||||||||||||||    
T  50014797 aaaataattgattcatttcacttttcagtacaatattaatta 50014756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 1859453 - 1859517
Alignment:
Q  123 aaaataattgagttatttcacttttcagtacaatattaattattttttccctttataactctaat 187  Q
    |||| |||||| | ||||||||||||| |||||||||||||||||||| |  |||||||| ||||    
T  1859453 aaaaaaattgactcatttcacttttcaatacaatattaattatttttttcaattataactttaat 1859517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 203
Target Start/End: Original strand, 30749714 - 30749782
Alignment:
Q  136 tatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatattattttcatc 203  Q
    ||||||| |||||| |||||||||||||| ||||||| ||||||||||||| | |||| || |||||||    
T  30749714 tatttcatttttcaatacaatattaattacttttttctctttataactctagttaatactactttcatc 30749782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 203
Target Start/End: Original strand, 30771165 - 30771233
Alignment:
Q  136 tatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatattattttcatc 203  Q
    ||||||| |||||| |||||||||||||| ||||||| ||||||||||||| | |||| || |||||||    
T  30771165 tatttcatttttcaatacaatattaattacttttttctctttataactctagttaatactactttcatc 30771233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 172
Target Start/End: Original strand, 44580451 - 44580511
Alignment:
Q  112 taaagtgtctcaaaataattgagttatttcacttttcagtacaatattaattattttttcc 172  Q
    |||| ||||||| || |||||| | ||||||||||||| ||||||||| ||||||||||||    
T  44580451 taaattgtctcagaaaaattgactcatttcacttttcaatacaatattcattattttttcc 44580511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 195
Target Start/End: Complemental strand, 48242751 - 48242679
Alignment:
Q  124 aaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatatta 195  Q
    |||||| | ||| ||||||||||||| |||||||||||||| |||||||  ||||||||| |||| |||||||    
T  48242751 aaataacttagtcatttcacttttcaatacaatattaattacttttttctttttataactttaattaatatta 48242679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 187
Target Start/End: Complemental strand, 51848865 - 51848793
Alignment:
Q  116 gtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaat 187  Q
    ||||| |||||||| ||||  ||||||||||||| ||||  |||||||| |||||| ||||||||||||||||    
T  51848865 gtgtcccaaaataagtgagacatttcacttttcaatacatcattaattactttttttcctttataactctaat 51848793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 201
Target Start/End: Complemental strand, 27210113 - 27210050
Alignment:
Q  138 tttcacttttcagtacaatattaattattttttccctttataactctaatcaatattattttca 201  Q
    |||||||||| | ||||| ||||||||||||||||  ||||||||||||| |||| | ||||||    
T  27210113 tttcacttttgaatacaacattaattattttttccaattataactctaattaatactcttttca 27210050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 203
Target Start/End: Original strand, 29225713 - 29225780
Alignment:
Q  137 atttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatattattttcatc 203  Q
    ||||||||||||| ||||||| |||||| ||||||||  ||||||||||||| |||| || |||||||    
T  29225713 atttcacttttcaatacaataataattacttttttccaattataactctaattaatactactttcatc 29225780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 170
Target Start/End: Original strand, 51049455 - 51049502
Alignment:
Q  123 aaaataattgagttatttcacttttcagtacaatattaattatttttt 170  Q
    |||||||||||| |||||||||||| | |||||||||||||| |||||    
T  51049455 aaaataattgagctatttcactttttaatacaatattaattacttttt 51049502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 192
Target Start/End: Original strand, 11324178 - 11324264
Alignment:
Q  107 aaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaata 192  Q
    ||||| |||||| || ||||||| ||| | ||||||||||||| ||||  ||||| || |||||||||||||||||| |||| ||||    
T  11324178 aaaaaaaaagtgccttaaaataactgaatcatttcacttttcaatacatcattaactacttttttccctttataactataattaata 11324264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 170
Target Start/End: Complemental strand, 11426054 - 11425984
Alignment:
Q  100 catttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaattatttttt 170  Q
    ||||| ||| || ||||||||  ||||||| ||||| |||||||||| || |||||||||||||| |||||    
T  11426054 cattttcaataaaaaagtgtcctaaaataactgagtcatttcactttccaatacaatattaattacttttt 11425984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 192
Target Start/End: Original strand, 11482199 - 11482285
Alignment:
Q  107 aaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaata 192  Q
    ||||| |||||| || ||||||| ||| | ||||||||||||| ||||  ||||| || |||||||||||||||||| |||| ||||    
T  11482199 aaaaaaaaagtgccttaaaataactgaatcatttcacttttcaatacatcattaactacttttttccctttataactataattaata 11482285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 201
Target Start/End: Original strand, 31798377 - 31798443
Alignment:
Q  136 tatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatattattttca 201  Q
    |||||||||||||| || ||||||||||| ||||||||  ||||||| ||||| ||||||| |||||    
T  31798377 tatttcacttttcaatataatattaattacttttttccaattataacactaattaatattactttca 31798443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 192
Target Start/End: Original strand, 37495772 - 37495839
Alignment:
Q  123 aaaataattgagttatttcacttttcagtacaatattaattattttttccctttataactctaatcaata 192  Q
    ||||||||||||| |||| |||||||  ||||||||||||| ||||||  |||||||||| |||| ||||    
T  37495772 aaaataattgagtcattttacttttctatacaatattaattttttttt--ctttataactttaattaata 37495839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 137 - 201
Target Start/End: Complemental strand, 20988630 - 20988565
Alignment:
Q  137 atttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatattattttca 201  Q
    |||||| |||||| ||||| |||||||| |||||| |  ||||||||||||| |||||||||||||    
T  20988630 atttcaattttcaatacaacattaattactttttttcaattataactctaattaatattattttca 20988565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 97 - 170
Target Start/End: Original strand, 32804172 - 32804245
Alignment:
Q  97 agtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaattatttttt 170  Q
    |||||||||  ||||||||||||  ||||||| || | | || ||| |||||| ||||||||||||||||||||    
T  32804172 agtcatttgttaaaataaagtgttccaaaatatttaattcatctcatttttcaatacaatattaattatttttt 32804245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 135 - 203
Target Start/End: Original strand, 44657303 - 44657372
Alignment:
Q  135 ttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatattattttcatc 203  Q
    ||||||| ||||||| || ||||||||| | |||||| |  ||||||||||||| |||||||||||||||    
T  44657303 ttatttctcttttcaatataatattaataactttttttcaattataactctaattaatattattttcatc 44657372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 137 - 201
Target Start/End: Original strand, 52432272 - 52432337
Alignment:
Q  137 atttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatattattttca 201  Q
    |||| |||||||| |||||||||||||| |||||| | |||||||||||||| ||| ||| |||||    
T  52432272 attttacttttcaatacaatattaattactttttttcttttataactctaattaatgttactttca 52432337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 201
Target Start/End: Complemental strand, 7075550 - 7075486
Alignment:
Q  137 atttcacttttcagtacaatattaattattttttccctttataactctaatcaatattattttca 201  Q
    ||||||||||||| ||||| ||||||| |||||| |  ||||||||||||| |||| || |||||    
T  7075550 atttcacttttcaatacaacattaattttttttttcaattataactctaattaatactactttca 7075486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 171
Target Start/End: Complemental strand, 26606276 - 26606240
Alignment:
Q  135 ttatttcacttttcagtacaatattaattattttttc 171  Q
    ||||||| ||||||| |||||||||||||||||||||    
T  26606276 ttatttcgcttttcaatacaatattaattattttttc 26606240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 164
Target Start/End: Complemental strand, 26924481 - 26924390
Alignment:
Q  72 tactcccttcgtcccacgataaataagtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta 164  Q
    |||||||| |||||||  |||| | ||||||||| ||||| | | |||| || || |||||| | ||||||||||||| ||||||||||||||    
T  26924481 tactccctccgtcccataataattgagtcatttgtaaaaa-atattgtcccagaaaaattgattcatttcacttttcaatacaatattaatta 26924390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 203
Target Start/End: Original strand, 46880364 - 46880443
Alignment:
Q  122 caaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatattattttcatc 203  Q
    |||||||| ||||| ||||||||||||| |||   |||||||| |||||||  |||||||||||||  ||||||| |||||||    
T  46880364 caaaataactgagtcatttcacttttcaatac---attaattatttttttcattttataactctaactaatattactttcatc 46880443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 1e-28; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 100 - 201
Target Start/End: Original strand, 5391971 - 5392074
Alignment:
Q  100 catttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta--ttttttccctttataactctaatcaatattatt 197  Q
    |||||||||||| ||||||||||||||||| ||||| ||||||||||||| ||||||||||||||  ||||||||||||||||||||||| |||| || |    
T  5391971 catttgcaaaaaaaaagtgtctcaaaataactgagtcatttcacttttcaatacaatattaattactttttttccctttataactctaattaatactact 5392070  T
Q  198 ttca 201  Q
    ||||    
T  5392071 ttca 5392074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 72 - 203
Target Start/End: Complemental strand, 38252650 - 38252518
Alignment:
Q  72 tactcccttcgtcccacgataaataagtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-tttttt 170  Q
    |||||||| |||||||  |||| | ||||||||||||||| |||||||| |||||||| |||   |||||||||||   |||||||||||||| ||||||    
T  38252650 tactccctccgtcccataataactgagtcatttgcaaaaaaaaagtgtcccaaaataactgaaccatttcactttttgatacaatattaattactttttt 38252551  T
Q  171 ccctttataactctaatcaatattattttcatc 203  Q
    |||||||||||||||||||||| || |||||||    
T  38252550 ccctttataactctaatcaatactactttcatc 38252518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 71 - 201
Target Start/End: Complemental strand, 32241640 - 32241506
Alignment:
Q  71 ttactcccttcgtcccacgataaataagtcatttgcaaaaataaa---gtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-tt 166  Q
    |||||| || |||| ||| |||| ||||||||||| ||||| |||   || ||  ||||||| ||||||||||||||||||| |||||||||||||| ||    
T  32241640 ttactcactccgtctcacaataactaagtcatttgtaaaaaaaaaaaagtatcctaaaataaatgagttatttcacttttcaatacaatattaattactt 32241541  T
Q  167 ttttccctttataactctaatcaatattattttca 201  Q
    ||||||||||||||||||||| ||||||| |||||    
T  32241540 ttttccctttataactctaattaatattactttca 32241506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 72 - 201
Target Start/End: Original strand, 2119611 - 2119741
Alignment:
Q  72 tactcccttcgtcccacgataaataagtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaattatt-tttt 170  Q
    |||||||| ||| |||  |||| | ||||||||| ||  | |||||||| |||||||| |||| |||||||| ||||| |||||||||||||||| ||||    
T  2119611 tactccctccgttccataataactgagtcatttgtaattaaaaagtgtcccaaaataactgagctatttcacatttcaatacaatattaattattatttt 2119710  T
Q  171 ccctttataactctaatcaatattattttca 201  Q
     |||||||||||||||| ||| |||||||||    
T  2119711 tcctttataactctaattaatcttattttca 2119741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 71 - 203
Target Start/End: Original strand, 12653579 - 12653714
Alignment:
Q  71 ttactcccttcgtcccacgataaataagtcatttgcaaa--aataaagtgtctcaaaataattgagttatttcacttttcagtacaatatt-aattattt 167  Q
    |||||| || |||||||  |||| | ||||||||||| |  || ||||||| ||||||||| | ||| ||||||||||||| ||||||||| ||||| ||    
T  12653579 ttactctctccgtcccataataactgagtcatttgcacacaaaaaaagtgtttcaaaataactaagtcatttcacttttcaatacaatatttaattactt 12653678  T
Q  168 tttccctttataactctaatcaatattattttcatc 203  Q
    ||||||||||||||||| || ||||||| |||||||    
T  12653679 tttccctttataactctgattaatattactttcatc 12653714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 72 - 203
Target Start/End: Original strand, 28802662 - 28802794
Alignment:
Q  72 tactcccttcgtcccacgataaataagtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-tttttt 170  Q
    |||| |||||||||||  |||| | |||||||| ||| || |||||||| |||||||| | ||  ||||||||||||| ||||  ||||| || ||||||    
T  28802662 tacttccttcgtcccataataactgagtcattttcaataaaaaagtgtcacaaaataagtcagccatttcacttttcaatacatcattaactactttttt 28802761  T
Q  171 ccctttataactctaatcaatattattttcatc 203  Q
    ||||||||||||||||| |||| ||||||||||    
T  28802762 ccctttataactctaattaataatattttcatc 28802794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 72 - 203
Target Start/End: Complemental strand, 32967489 - 32967357
Alignment:
Q  72 tactcccttcgtcccacgataaataagtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-tttttt 170  Q
    |||||| | |||||||  |||| | ||||||||||||||| ||||||| |||||||||   ||| ||||||||||||| |||| ||||| ||| ||||||    
T  32967489 tactccatccgtcccataataactgagtcatttgcaaaaaaaaagtgtttcaaaataacctagtcatttcacttttcaatacagtattagttactttttt 32967390  T
Q  171 ccctttataactctaatcaatattattttcatc 203  Q
     |||||||||||||||| |||| || |||||||    
T  32967389 tcctttataactctaattaatactactttcatc 32967357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 122 - 187
Target Start/End: Complemental strand, 33191071 - 33191005
Alignment:
Q  122 caaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaat 187  Q
    |||||||| ||||| ||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  33191071 caaaataactgagtcatttcacttttcaatacaatattaattacttttttccctttataactctaat 33191005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 72 - 203
Target Start/End: Original strand, 29615690 - 29615825
Alignment:
Q  72 tactcccttcgtcccacgataaataagtcatttgcaaaaataaa---gtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttt 167  Q
    |||| ||| |||||||  |||||| ||||||||||||||| |||   ||||  |||||||| ||| | |||| |||||||| |||||||||||||| |||    
T  29615690 tacttcctccgtcccataataaatgagtcatttgcaaaaaaaaaaaagtgttccaaaataactgaatcattttacttttcaatacaatattaattatttt 29615789  T
Q  168 tttccctttataactctaatcaatattattttcatc 203  Q
    ||||||||||||||| |||| |||| || |||||||    
T  29615790 tttccctttataactttaattaatactactttcatc 29615825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 97 - 201
Target Start/End: Complemental strand, 36012159 - 36012054
Alignment:
Q  97 agtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaattatt-ttttccctttataactctaatcaatatta 195  Q
    ||||||||||||||||| | |||||||||||  ||||   ||||||||||||| |||||||||||||||| ||||||  ||||||||||||| |||| ||    
T  36012159 agtcatttgcaaaaatatattgtctcaaaatttttgatacatttcacttttcaatacaatattaattatttttttccacttataactctaattaatacta 36012060  T
Q  196 ttttca 201  Q
     |||||    
T  36012059 ctttca 36012054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 123 - 203
Target Start/End: Complemental strand, 44615526 - 44615445
Alignment:
Q  123 aaaataattgagttatttcacttttcagtacaatattaattattttttccc-tttataactctaatcaatattattttcatc 203  Q
    ||||||| ||||| |||||||||| || |||||||||||||| |||| ||| |||||||||||||| |||||||||||||||    
T  44615526 aaaataactgagtcatttcactttccaatacaatattaattacttttccccctttataactctaattaatattattttcatc 44615445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 34133071 - 34133154
Alignment:
Q  121 tcaaaataattgagttatttcacttttcagtacaatattaattatt-ttttccctttataactctaatcaatattattttcatc 203  Q
    ||||||||| ||||| ||| ||||||||| |||||||||||||||| |||||| |||||||||| ||| ||||||| |||||||    
T  34133071 tcaaaataactgagtcattacacttttcaatacaatattaattattattttccttttataactccaattaatattactttcatc 34133154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 97 - 203
Target Start/End: Original strand, 21587196 - 21587304
Alignment:
Q  97 agtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta--ttttttccctttataactctaatcaatatt 194  Q
    |||||||| |||||| |||||||| |||||||  ||||  ||||||||||||| | ||||||||||||  ||||||| ||||||||| || ||||||| |    
T  21587196 agtcattttcaaaaacaaagtgtcccaaaatatctgagccatttcacttttcaatgcaatattaattactttttttctctttataacgctgatcaatact 21587295  T
Q  195 attttcatc 203  Q
    | |||||||    
T  21587296 actttcatc 21587304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 137 - 202
Target Start/End: Complemental strand, 38201537 - 38201472
Alignment:
Q  137 atttcacttttcagtacaatattaattattttttccctttataactctaatcaatattattttcat 202  Q
    ||||||||||||| ||||||| |||||||||||| | |||||||||||||| ||||||| ||||||    
T  38201537 atttcacttttcaatacaataataattatttttttcatttataactctaattaatattactttcat 38201472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 123 - 203
Target Start/End: Original strand, 3442430 - 3442510
Alignment:
Q  123 aaaataattgagttatttcacttttcagtacaatattaattattttttccctttataactctaatcaatattattttcatc 203  Q
    ||||||| ||| |||||| |||||||| | |||||||||||||||||| |  ||||||||||||| |||| ||||||||||    
T  3442430 aaaataagtgacttattttacttttcaattcaatattaattatttttttcaattataactctaattaatactattttcatc 3442510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 203
Target Start/End: Original strand, 39171474 - 39171570
Alignment:
Q  108 aaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatattattttcatc 203  Q
    |||| ||| |||| |||||||| ||||| |||| |||||||| || ||||||||||| |||||||  |||||||||||||| |||| ||||||||||    
T  39171474 aaaaaaaaatgtcccaaaataactgagtcatttaacttttcaatataatattaattacttttttctttttataactctaattaatactattttcatc 39171570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 72 - 201
Target Start/End: Complemental strand, 44790634 - 44790504
Alignment:
Q  72 tactcccttcgtcccacgataaataagtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta--ttttt 169  Q
    |||||||| |||||||  |||| | ||  ||||||||||| |||||||| |||||||||| ||  ||||||||||||| ||||  ||||||||   ||||    
T  44790634 tactccctccgtcccataataactgagctatttgcaaaaa-aaagtgtcccaaaataattaagccatttcacttttcaatacatcattaattactatttt 44790536  T
Q  170 tccctttataactctaatcaatattattttca 201  Q
    |||||||||||||||||| |||| || |||||    
T  44790535 tccctttataactctaattaatactactttca 44790504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 22325113 - 22325054
Alignment:
Q  126 ataattgagttatttcacttttcagtacaatattaattatt-ttttccctttataactct 184  Q
    |||||||||| ||||||||||||| |||||||||||||||| ||||| ||||||||||||    
T  22325113 ataattgagtcatttcacttttcaatacaatattaattatttttttctctttataactct 22325054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 72 - 202
Target Start/End: Original strand, 2796934 - 2797066
Alignment:
Q  72 tactcccttcgtcccacgataaataagtcatttgcaaaaataaagtgtctcaaaataa-ttgagttatttcacttttcagtacaatattaattatttttt 170  Q
    |||||||| |||||||  |||| | || |||||||||||| | | ||| |||||| || |||| | ||||||||||||| ||||||||||||||||||||    
T  2796934 tactccctccgtcccataataagtgagccatttgcaaaaaaatattgt-tcaaaaaaacttgactcatttcacttttcaatacaatattaattatttttt 2797032  T
Q  171 --ccctttataactctaatcaatattattttcat 202  Q
      ||  ||||||||||||| ||||||| ||||||    
T  2797033 taccaattataactctaattaatattactttcat 2797066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 203
Target Start/End: Complemental strand, 5962651 - 5962553
Alignment:
Q  107 aaaaataaagtgtctcaaaataattgagttattt-cacttttcagtacaatattaattattttttccc-tttataactctaatcaatattattttcatc 203  Q
    ||||| ||||||||  ||||||| ||||| |||| |||||| || |||| ||||||||| |||||||| |||||||||||||| ||||||| |||||||    
T  5962651 aaaaaaaaagtgtcctaaaataactgagtcattttcactttccaatacattattaattactttttcccctttataactctaattaatattaatttcatc 5962553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 72 - 201
Target Start/End: Original strand, 14689855 - 14689985
Alignment:
Q  72 tactcccttcgtcccacgataaataagtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-tttttt 170  Q
    |||||||| |||||||  |||| | ||||||||||||||| | | |||| || || ||||||   ||||||||||||| |||||||||||||| ||||||    
T  14689855 tactccctccgtcccataataactgagtcatttgcaaaaaaatattgtcccagaaaaattgacccatttcacttttcaatacaatattaattactttttt 14689954  T
Q  171 ccctttataactctaatcaatattattttca 201  Q
    ||  ||||||| ||||| |||| || |||||    
T  14689955 ccaattataacactaattaatactactttca 14689985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 123 - 203
Target Start/End: Original strand, 33826181 - 33826258
Alignment:
Q  123 aaaataattgagttatttcacttttcagtacaatattaattattttttccctttataactctaatcaatattattttcatc 203  Q
    ||||||||||| ||||||||||||||| ||||||||||   ||||||| |  |||||||||||||||||| || |||||||    
T  33826181 aaaataattgacttatttcacttttcaatacaatatta---atttttttcaattataactctaatcaatactactttcatc 33826258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 122 - 203
Target Start/End: Complemental strand, 34287241 - 34287159
Alignment:
Q  122 caaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatattattttcatc 203  Q
    |||||||| ||||| ||||||||||||| ||||| |||||| | |||||| ||||||||| |||||| ||||||| |||||||    
T  34287241 caaaataactgagtcatttcacttttcaatacaacattaatcactttttttcctttataattctaattaatattactttcatc 34287159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 171
Target Start/End: Complemental strand, 29731029 - 29730981
Alignment:
Q  123 aaaataattgagttatttcacttttcagtacaatattaattattttttc 171  Q
    ||||||| ||||| ||||||||||||| |||||||||||||||||||||    
T  29731029 aaaataactgagtcatttcacttttcaatacaatattaattattttttc 29730981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 202
Target Start/End: Complemental strand, 31410769 - 31410689
Alignment:
Q  123 aaaataattgagttatttcacttttcagtacaatattaattattttttccctt-tataactctaatcaatattattttcat 202  Q
    ||||||| ||||| |||||||||| || |||||||||||||| |||||||||| ||||||| |||| |||| || ||||||    
T  31410769 aaaataactgagtcatttcactttccaatacaatattaattactttttcccttctataactttaattaatactactttcat 31410689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 171
Target Start/End: Original strand, 138957 - 139027
Alignment:
Q  100 catttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaattattttttc 171  Q
    ||||||| |||| ||| |||| ||||||||  |||| ||||||||||||| |||||||||||||||||||||    
T  138957 catttgcgaaaaaaaa-tgtcccaaaataaccgagtcatttcacttttcaatacaatattaattattttttc 139027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 201
Target Start/End: Original strand, 2349261 - 2349375
Alignment:
Q  90 ataaataagtcatttgcaaaaat--aaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaa 186  Q
    |||||| |||||||| ||||||   ||| ||| ||||||||| | ||| ||||||| ||||| ||||||||||||||  ||||| | |||||||||||||    
T  2349261 ataaatgagtcatttacaaaaaagaaaaatgtttcaaaataacttagtcatttcacgtttcaatacaatattaattaccttttttcttttataactctaa 2349360  T
Q  187 tcaatattattttca 201  Q
    | ||||||| |||||    
T  2349361 ttaatattactttca 2349375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 203
Target Start/End: Complemental strand, 13085118 - 13085031
Alignment:
Q  117 tgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatattattttcatc 203  Q
    |||| ||||| |||||| | ||||||||||||| ||||||||||||||  |||||||   |||||||||||| ||| |||||||||||    
T  13085118 tgtcccaaaaaaattgattcatttcacttttcaatacaatattaattacctttttccaaatataactctaattaatgttattttcatc 13085031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 203
Target Start/End: Complemental strand, 33746350 - 33746299
Alignment:
Q  152 acaatattaattattttttccctttataactctaatcaatattattttcatc 203  Q
    ||||||||||||||||||| ||||||||||| |||| |||| ||||||||||    
T  33746350 acaatattaattatttttttcctttataactataattaatactattttcatc 33746299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 100 - 170
Target Start/End: Complemental strand, 17790281 - 17790211
Alignment:
Q  100 catttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaattatttttt 170  Q
    |||||||||||| | | |||| || || |||| | ||||||||||||||| ||||||||||||||||||||    
T  17790281 catttgcaaaaaaatattgtcccagaaaaatttacttatttcacttttcaatacaatattaattatttttt 17790211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 201
Target Start/End: Complemental strand, 32231887 - 32231802
Alignment:
Q  117 tgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatattattttca 201  Q
    |||| ||||| |||||| | ||||||||||||| |||||||||||||| ||||||||  ||||||| ||||| |||| || |||||    
T  32231887 tgtcccaaaaaaattgactcatttcacttttcaatacaatattaattacttttttccaattataacactaattaataatactttca 32231802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 203
Target Start/End: Complemental strand, 44975933 - 44975829
Alignment:
Q  99 tcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatt-attttttccctttataactctaatcaatattatt 197  Q
    |||||||||| || | | |||||||||| ||||||   |||||||||||||| |||||||||||| ||||||| |  ||||||||||||| |||| || |    
T  44975933 tcatttgcaataaaatattgtctcaaaa-aattgatgaatttcacttttcagcacaatattaattaattttttgcaattataactctaattaatactact 44975835  T
Q  198 ttcatc 203  Q
    ||||||    
T  44975834 ttcatc 44975829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 203
Target Start/End: Original strand, 2195363 - 2195495
Alignment:
Q  72 tactcccttcgtcccacgataaataagtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-tttttt 170  Q
    ||||| || |||||||  |||| | ||||||||||||||| |   |||| ||||| ||||||   ||||||||||||| ||||| | |||||| ||||||    
T  2195363 tactctctccgtcccataataactgagtcatttgcaaaaaaatgttgtcccaaaaaaattgacccatttcacttttcaatacaacaataattactttttt 2195462  T
Q  171 ccctttataactctaatcaatattattttcatc 203  Q
    ||  ||||||||||||| |||| || |||||||    
T  2195463 ccaattataactctaattaatactactttcatc 2195495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 201
Target Start/End: Original strand, 31132652 - 31132755
Alignment:
Q  100 catttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta--ttttttccctttataactctaatcaatattatt 197  Q
    |||||| ||||  |||||||  ||||||||  |||| |||||| |||||| ||||||||||||||  ||||||||  ||||||||||||| |||| || |    
T  31132652 catttgtaaaagaaaagtgttccaaaataacggagtcatttcatttttcaatacaatattaattactttttttcctcttataactctaattaatactact 31132751  T
Q  198 ttca 201  Q
    ||||    
T  31132752 ttca 31132755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 201
Target Start/End: Complemental strand, 4274460 - 4274381
Alignment:
Q  123 aaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatattattttca 201  Q
    ||||||| | ||| ||||| ||||||| ||||  |||||||| |||||| | |||||||||||||| |||||||||||||    
T  4274460 aaaataagtaagtcatttcgcttttcaatacatcattaattactttttttcatttataactctaattaatattattttca 4274381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 171
Target Start/End: Complemental strand, 8394674 - 8394631
Alignment:
Q  128 aattgagttatttcacttttcagtacaatattaattattttttc 171  Q
    |||||| | |||||||||||||||||||||||| ||||||||||    
T  8394674 aattgactcatttcacttttcagtacaatattatttattttttc 8394631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 170
Target Start/End: Complemental strand, 42797836 - 42797801
Alignment:
Q  135 ttatttcacttttcagtacaatattaattatttttt 170  Q
    ||||||||||||||| ||||||||||||||||||||    
T  42797836 ttatttcacttttcaatacaatattaattatttttt 42797801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 171
Target Start/End: Complemental strand, 138836 - 138802
Alignment:
Q  137 atttcacttttcagtacaatattaattattttttc 171  Q
    ||||||||||||| |||||||||||||||||||||    
T  138836 atttcacttttcaatacaatattaattattttttc 138802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 187
Target Start/End: Complemental strand, 4480596 - 4480539
Alignment:
Q  132 gagttatttcacttttcagtacaatattaatta--ttttttccctttataactctaat 187  Q
    |||| |||||| |||||| ||||||||||||||  |||||| ||||||||||||||||    
T  4480596 gagtcatttcatttttcaatacaatattaattaattttttttcctttataactctaat 4480539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 203
Target Start/End: Complemental strand, 42558743 - 42558661
Alignment:
Q  122 caaaataattgagttatttcacttttcagtacaatattaattatt-ttttccctttataactctaatcaatattattttcatc 203  Q
    |||||||| ||||| ||||||||||||| ||||  |||||||||| |||||  |||| ||||||||| |||| || |||||||    
T  42558743 caaaataagtgagtcatttcacttttcaatacatcattaattatttttttctttttacaactctaattaatactactttcatc 42558661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 119 - 195
Target Start/End: Complemental strand, 886613 - 886536
Alignment:
Q  119 tctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatatta 195  Q
    ||||| || |||||| | ||||||||||||| |||||||||||||| |||||| |  ||||||| ||||| |||||||    
T  886613 tctcagaaaaattgactcatttcacttttcaatacaatattaattactttttttcaattataacactaattaatatta 886536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 2875232 - 2875167
Alignment:
Q  138 tttcacttttcagtacaatattaattatttttt-ccctttataactctaatcaatattattttcat 202  Q
    |||||||||||| |||||||| ||||||||||| ||  ||||||||||||| |||| || ||||||    
T  2875232 tttcacttttcaatacaatatgaattattttttaccaattataactctaattaatactactttcat 2875167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 137 - 170
Target Start/End: Complemental strand, 8566553 - 8566520
Alignment:
Q  137 atttcacttttcagtacaatattaattatttttt 170  Q
    ||||||||||||| ||||||||||||||||||||    
T  8566553 atttcacttttcaatacaatattaattatttttt 8566520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 119 - 203
Target Start/End: Original strand, 9014542 - 9014627
Alignment:
Q  119 tctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatattattttcatc 203  Q
    ||||||||||| ||||| |||| |||||| | |||||| ||||||| |||||||| ||||||| ||| || |||| || |||||||    
T  9014542 tctcaaaataactgagtcattttactttttaatacaattttaattacttttttccttttataattcttattaatactactttcatc 9014627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 113 - 170
Target Start/End: Original strand, 22490322 - 22490379
Alignment:
Q  113 aaagtgtctcaaaataattgagttatttcacttttcagtacaatattaattatttttt 170  Q
    ||||||||||||||||   ||||||||| |||||||| |||||||||| || ||||||    
T  22490322 aaagtgtctcaaaatatccgagttattttacttttcaatacaatattatttttttttt 22490379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 97 - 170
Target Start/End: Original strand, 33743695 - 33743768
Alignment:
Q  97 agtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaattatttttt 170  Q
    ||||||||||||| ||| | |||  || || |||||| | |||| |||||||| ||||||||||||||||||||    
T  33743695 agtcatttgcaaagatatattgttccagaaaaattgactcatttaacttttcaatacaatattaattatttttt 33743768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 117 - 201
Target Start/End: Original strand, 38908766 - 38908853
Alignment:
Q  117 tgtctcaaaataattgagttatttcacttttcagtacaatattaattatt---ttttccctttataactctaatcaatattattttca 201  Q
    |||||||||| ||||||  |||||||||||||| |||||||| |||||||   |||| |  ||||||||||||| |||| || |||||    
T  38908766 tgtctcaaaaaaattgatctatttcacttttcaatacaatatcaattattatttttttcaattataactctaattaatactactttca 38908853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 164
Target Start/End: Original strand, 27571387 - 27571482
Alignment:
Q  72 tactcccttcgtcccacgataaataagtcatttgcaaaaataa--ag-tgtctcaaaataattgagttatttcacttttcagtacaatattaatta 164  Q
    ||||||||  |||||| ||||||||||||||||| ||||| ||  || |||| |||||| | ||| | ||||||||||||| || |||||||||||    
T  27571387 tactccctatgtcccatgataaataagtcatttgtaaaaaaaattagttgtcccaaaatgaatgactcatttcacttttcaatataatattaatta 27571482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 164
Target Start/End: Original strand, 34133004 - 34133068
Alignment:
Q  100 catttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta 164  Q
    ||||| |||||| || ||||| |||||||| ||||| ||| ||||||| | ||||||||||||||    
T  34133004 catttacaaaaaaaatgtgtcccaaaataactgagtcattacactttttaatacaatattaatta 34133068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 192
Target Start/End: Complemental strand, 45421087 - 45421031
Alignment:
Q  137 atttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaata 192  Q
    ||||||||||||| |||||||||||||| ||||||||  ||||||| ||||| ||||    
T  45421087 atttcacttttcaatacaatattaattacttttttccaattataacactaattaata 45421031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 203
Target Start/End: Original strand, 45425429 - 45425512
Alignment:
Q  123 aaaataattgagttatttcacttttcagtacaatattaatt-attt--tttccctttataactctaatcaatattattttcatc 203  Q
    ||||||||||||| |||||| |||||| ||  ||||||||| ||||  |||  ||||||||||||||| ||||||| |||||||    
T  45425429 aaaataattgagtcatttcatttttcaatatgatattaatttatttattttttctttataactctaattaatattactttcatc 45425512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 64; Significance: 4e-28; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 72 - 201
Target Start/End: Original strand, 3100294 - 3100425
Alignment:
Q  72 tactcccttcgtcccacgataaataagtcatttgcaaaaataaa-gtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttt 169  Q
    |||||||| |||||||| |||| | || |||||||||||| ||| |||||||||||||| ||||| ||||||||||||| |||||||||||||| |||||    
T  3100294 tactccctccgtcccacaataactgagccatttgcaaaaaaaaaagtgtctcaaaataactgagtcatttcacttttcaatacaatattaattacttttt 3100393  T
Q  170 tccctttataactctaatcaatattattttca 201  Q
    ||||||| |||||||||| |||| || |||||    
T  3100394 tccctttgtaactctaattaatactactttca 3100425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 107 - 203
Target Start/End: Complemental strand, 43077902 - 43077806
Alignment:
Q  107 aaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaattattttttccctttataactctaatcaatattattttcatc 203  Q
    ||||| |||||||| ||||||||  |||| ||||||||||||| |||||||||||||||||||||| |||||||||||||| ||||||| |||||||    
T  43077902 aaaaaaaaagtgtcccaaaataacggagtcatttcacttttcaatacaatattaattattttttccttttataactctaattaatattactttcatc 43077806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 72 - 201
Target Start/End: Original strand, 7213370 - 7213500
Alignment:
Q  72 tactcccttcgtcccacgataaataagtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaattattttttc 171  Q
    |||||||| |||||||  |||| | |||||||||||||||  ||||||| |||||||||| | | ||||||||||||| |||||||||||||| ||||||    
T  7213370 tactccctccgtcccataataagtgagtcatttgcaaaaaataagtgtcccaaaataattaaatcatttcacttttcaatacaatattaattactttttc 7213469  T
Q  172 cc-tttataactctaatcaatattattttca 201  Q
    || |||||||||||||| |||| || |||||    
T  7213470 ccttttataactctaattaatactactttca 7213500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 72 - 203
Target Start/End: Original strand, 3123539 - 3123670
Alignment:
Q  72 tactcccttcgtcccacgataaataagtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaattatt-tttt 170  Q
    |||||||| |||||||  |||| | ||||| ||||||||| |||   ||||||||||| ||||| |||||||||| || |||||||||||||||| ||||    
T  3123539 tactccctccgtcccataataactgagtcaattgcaaaaaaaaaaa-tctcaaaataactgagtcatttcactttccaatacaatattaattattatttt 3123637  T
Q  171 ccctttataactctaatcaatattattttcatc 203  Q
     |||||||||||||||| |||||||||||||||    
T  3123638 tcctttataactctaattaatattattttcatc 3123670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 72 - 203
Target Start/End: Original strand, 40964948 - 40965079
Alignment:
Q  72 tactcccttcgtcccacgataaataagtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-tttttt 170  Q
    ||||||||  ||||||  |||| | |||||||||||||||  || |||| |||||||| |||||||||| | |||||| |||||||||||||| ||||||    
T  40964948 tactccctcagtcccataataactgagtcatttgcaaaaaagaaatgtcccaaaataactgagttattt-atttttcaatacaatattaattactttttt 40965046  T
Q  171 ccctttataactctaatcaatattattttcatc 203  Q
    ||||||||||||||||| ||||||| |||||||    
T  40965047 ccctttataactctaattaatattactttcatc 40965079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 124 - 201
Target Start/End: Original strand, 33880106 - 33880183
Alignment:
Q  124 aaataattgagttatttcacttttcagtacaatattaattattttttccctttataactctaatcaatattattttca 201  Q
    |||||||||||| ||||||||||| | |||||||||||||| |||||||||||||||||||||| ||||||| |||||    
T  33880106 aaataattgagtcatttcactttttaatacaatattaattactttttccctttataactctaattaatattactttca 33880183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 72 - 201
Target Start/End: Original strand, 28572106 - 28572233
Alignment:
Q  72 tactcccttcgtcccacgataaataagtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaattattttttc 171  Q
    |||||||| |||||||| |||| | || |||||||||| | |||||||| |||||||| ||||| ||||||||||||| ||||||||||||||   ||||    
T  28572106 tactccctccgtcccacaataactgagacatttgcaaataaaaagtgtcccaaaataactgagtcatttcacttttcaatacaatattaatta--ctttc 28572203  T
Q  172 cctttataactctaatcaatattattttca 201  Q
     |||||||||| |||| |||| || |||||    
T  28572204 tctttataactgtaattaatactactttca 28572233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 126 - 201
Target Start/End: Complemental strand, 15859500 - 15859424
Alignment:
Q  126 ataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatattattttca 201  Q
    |||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||| || |||| |||||    
T  15859500 ataattgagtcatttcacttttcaatacaatattaattacttttttccctttataactctaattaacattactttca 15859424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 41436023 - 41436106
Alignment:
Q  121 tcaaaataattgagttatttcacttttcagtacaatattaattattttttccc-tttataactctaatcaatattattttcatc 203  Q
    ||||||||| ||||| ||||||||||||| |||||||||||||| |||||||| |||||||||||||| |||| || |||||||    
T  41436023 tcaaaataactgagtcatttcacttttcaatacaatattaattactttttcccttttataactctaattaatactactttcatc 41436106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 72 - 171
Target Start/End: Complemental strand, 44534698 - 44534600
Alignment:
Q  72 tactcccttcgtcccacgataaataagtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaattattttttc 171  Q
    |||||| | |||||||| |||| | |||||||| |||||| ||| ||||||||||||| ||||| ||||||||||||| |||||||||||||| ||||||    
T  44534698 tactccatccgtcccacaataactgagtcatttacaaaaaaaaa-tgtctcaaaataactgagtcatttcacttttcaatacaatattaattactttttc 44534600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 97 - 203
Target Start/End: Original strand, 31592471 - 31592577
Alignment:
Q  97 agtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaattattttttccctttataactctaatcaatattat 196  Q
    ||||||||||||||  | | |||| ||||| |||||| | ||||||||||||| ||||||| |||||| |||||||  |||||||| |||| ||||||||    
T  31592471 agtcatttgcaaaataatattgtcccaaaaaaattgactcatttcacttttcaatacaataataattactttttccaattataactttaattaatattat 31592570  T
Q  197 tttcatc 203  Q
    |||||||    
T  31592571 tttcatc 31592577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 113 - 203
Target Start/End: Original strand, 10818556 - 10818648
Alignment:
Q  113 aaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta--ttttttccctttataactctaatcaatattattttcatc 203  Q
    ||||||||||||||||| ||||| |||||| |||| | || |||||||||||  ||||||||||||||||||||||| ||||| | |||||||    
T  10818556 aaagtgtctcaaaataactgagtcatttcattttttaatataatattaattactttttttccctttataactctaattaatatcactttcatc 10818648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 100 - 203
Target Start/End: Original strand, 33751384 - 33751488
Alignment:
Q  100 catttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatattattt 198  Q
    ||||| ||| || ||||||||  ||||||| ||||| ||||||||||||| ||||  |||||||| ||||||||||||||||||||||| |||| || ||    
T  33751384 cattttcaataaaaaagtgtccaaaaataaatgagtcatttcacttttcaatacatcattaattacttttttccctttataactctaattaatactactt 33751483  T
Q  199 tcatc 203  Q
    |||||    
T  33751484 tcatc 33751488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 44194598 - 44194662
Alignment:
Q  123 aaaataattgagttatttcacttttcagtacaatattaattattttttccctttataactctaat 187  Q
    ||||||| ||| | ||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  44194598 aaaataactgaatcatttcacttttcaatacaatattaattattttttccttttataactctaat 44194662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 97 - 203
Target Start/End: Complemental strand, 7650161 - 7650055
Alignment:
Q  97 agtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatatta 195  Q
    ||||||||||||||| ||| | ||| ||||||| ||| | ||||||||||| | |||||||||||||| |||||||| |||||||||||||| |||| ||    
T  7650161 agtcatttgcaaaaaaaaa-tatcttaaaataactgaatcatttcacttttaaatacaatattaattacttttttccttttataactctaattaatacta 7650063  T
Q  196 ttttcatc 203  Q
    | ||||||    
T  7650062 tcttcatc 7650055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 97 - 164
Target Start/End: Complemental strand, 13375660 - 13375594
Alignment:
Q  97 agtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta 164  Q
    ||||||||||||||| ||| ||||||||||||| ||||| ||||||||||||| ||||||||||||||    
T  13375660 agtcatttgcaaaaaaaaa-tgtctcaaaataactgagtcatttcacttttcaatacaatattaatta 13375594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 122 - 192
Target Start/End: Complemental strand, 28926010 - 28925939
Alignment:
Q  122 caaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaata 192  Q
    |||||||||||||  |||||| |||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  28926010 caaaataattgagccatttcatttttcaatacaatattaattacttttttccctttataactctaattaata 28925939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 72 - 209
Target Start/End: Complemental strand, 37248097 - 37247958
Alignment:
Q  72 tactcccttcgtcccacgataaataagtcatttgcaa-aaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttt 169  Q
    |||||||| ||||| |  |||| | |||||||| ||| ||| ||||| || |||||||| |||||  |||||||||||| ||||   ||||||| |||||    
T  37248097 tactccctccgtccaataataattgagtcattttcaataaaaaaagtatcccaaaataagtgagtcgtttcacttttcaatacatatttaattaattttt 37247998  T
Q  170 tccctttataactctaatcaatattattttcatctcactc 209  Q
    |||||||||||||||||| ||||||| ||||||| |||||    
T  37247997 tccctttataactctaattaatattactttcatcacactc 37247958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 65 - 201
Target Start/End: Complemental strand, 5212175 - 5212040
Alignment:
Q  65 tacattttactcccttcgtcccacgataaataagtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta 164  Q
    |||||| |||| ||| |||||||| ||||   || |||||||||||| |||||  |  ||||||| ||||||||||||||||||| ||||||||||||||    
T  5212175 tacattatacttcctccgtcccacaataatcgagccatttgcaaaaaaaaagt--cctaaaataactgagttatttcacttttcaatacaatattaatta 5212078  T
Q  165 -ttttttccctttataactctaatcaatattattttca 201  Q
     |||||| ||||||||| | |||| |||| || |||||    
T  5212077 ctttttttcctttataaatttaattaatactactttca 5212040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 90 - 186
Target Start/End: Complemental strand, 38873114 - 38873017
Alignment:
Q  90 ataaataagtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaa 186  Q
    |||| |||||||||||||||||  || |||||||||| |||||| | |||||| |||| | |||||||||||||| ||||||||  ||||||||||||    
T  38873114 ataactaagtcatttgcaaaaaagaattgtctcaaaaaaattgactcatttcattttttaatacaatattaattacttttttccgattataactctaa 38873017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 117 - 201
Target Start/End: Original strand, 9724821 - 9724905
Alignment:
Q  117 tgtctcaaaataattgagttatttcacttttcagtacaatattaattattttttccctttataactctaatcaatattattttca 201  Q
    |||| ||||| |||||||  ||||||||||||| |||||||||||||| |||||  ||||||||||||||| |||| || |||||    
T  9724821 tgtcccaaaaaaattgagccatttcacttttcaatacaatattaattactttttttctttataactctaattaatactactttca 9724905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 117 - 195
Target Start/End: Complemental strand, 14284440 - 14284362
Alignment:
Q  117 tgtctcaaaataattgagttatttcacttttcagtacaatattaattattttttccctttataactctaatcaatatta 195  Q
    |||| |||||||| ||||| |||| | |||||| ||||||||||||||||||||||||| || ||| |||| |||||||    
T  14284440 tgtcccaaaataactgagtcattttatttttcaatacaatattaattattttttcccttcatgactgtaattaatatta 14284362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 97 - 201
Target Start/End: Original strand, 28526886 - 28526989
Alignment:
Q  97 agtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatatta 195  Q
    |||||||| ||||||  |||||||  ||||||| ||| | ||||||||||||| || ||||||||||| ||||||| |||||||||| |||| |||||||    
T  28526886 agtcatttacaaaaa--aagtgtcataaaataactgaatcatttcacttttcaatataatattaattacttttttctctttataactataattaatatta 28526983  T
Q  196 ttttca 201  Q
     |||||    
T  28526984 ctttca 28526989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 122 - 203
Target Start/End: Complemental strand, 28108538 - 28108455
Alignment:
Q  122 caaaataattgagttatttcacttttcagtacaatattaatta--ttttttccctttataactctaatcaatattattttcatc 203  Q
    |||||||| ||||  ||| ||||||||| ||||| ||||||||  ||||||||||||||||||||||| |||| || |||||||    
T  28108538 caaaataactgagccattccacttttcaatacaacattaattactttttttccctttataactctaattaatactactttcatc 28108455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 136 - 181
Target Start/End: Complemental strand, 435232 - 435186
Alignment:
Q  136 tatttcacttttcagtacaatattaattattt-tttccctttataac 181  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||    
T  435232 tatttcacttttcaatacaatattaattatttctttccctttataac 435186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 72 - 178
Target Start/End: Original strand, 564992 - 565098
Alignment:
Q  72 tactcccttcgtcccacgataaataagtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaattattttttc 171  Q
    |||||||| |||||||  |||  | ||||| |||||| || |||||||| |||||||| | | | |||| |||||||| |||||||||||||| |||| |    
T  564992 tactccctccgtcccataatagctcagtcacttgcaagaaaaaagtgtcccaaaataactaaatcattttacttttcaatacaatattaattacttttcc 565091  T
Q  172 cctttat 178  Q
    |||||||    
T  565092 cctttat 565098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 137 - 203
Target Start/End: Original strand, 9936977 - 9937043
Alignment:
Q  137 atttcacttttcagtacaatattaattattttttccctttataactctaatcaatattattttcatc 203  Q
    ||||||| ||||| |||||||||||||||||||| |  |||||||| |||| ||||||| |||||||    
T  9936977 atttcacatttcaatacaatattaattatttttttcaattataactttaattaatattaatttcatc 9937043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 203
Target Start/End: Complemental strand, 7648995 - 7648946
Alignment:
Q  154 aatattaattattttttccctttataactctaatcaatattattttcatc 203  Q
    ||||||||||| ||||||||||||||| |||||| |||| ||||||||||    
T  7648995 aatattaattactttttccctttataattctaattaatactattttcatc 7648946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 164
Target Start/End: Original strand, 8385022 - 8385063
Alignment:
Q  123 aaaataattgagttatttcacttttcagtacaatattaatta 164  Q
    ||||||||||| ||||||||||||||| ||||||||||||||    
T  8385022 aaaataattgacttatttcacttttcaatacaatattaatta 8385063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 73 - 170
Target Start/End: Original strand, 13221965 - 13222061
Alignment:
Q  73 actcccttcgtcccacgataaataagtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaattatttttt 170  Q
    ||||||| |||||||  |||| | ||||||||||||||| | | |||| || || ||||||   ||||||||||||| ||||||||||||||||||||    
T  13221965 actccctccgtcccataataactgagtcatttgcaaaaaaatattgtcccataaaaattgacc-atttcacttttcaatacaatattaattatttttt 13222061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 203
Target Start/End: Complemental strand, 24775985 - 24775888
Alignment:
Q  107 aaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaat-attaattattttttccctttataactctaatcaatattattttcatc 203  Q
    ||||| ||||||| |  |||||||||||| || |||||||||| || ||| |||||| ||||||| ||||||||||||| || |||| || |||||||    
T  24775985 aaaaaaaaagtgttttgaaataattgagtcatatcacttttcaatataattattaatcatttttttcctttataactctgattaatactactttcatc 24775888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 203
Target Start/End: Complemental strand, 30757780 - 30757648
Alignment:
Q  71 ttactcccttcgtcccacgataaataagtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttt 169  Q
    ||||||||| |||||||  |||| | || |||||||||||  ||||||||  ||||| | ||||  ||  ||||||||| |||||||||||||| |||||    
T  30757780 ttactccctccgtcccataataactgagccatttgcaaaagaaaagtgtccaaaaattaatgagccata-cacttttcaatacaatattaattacttttt 30757682  T
Q  170 tccctttataactctaatcaatattattttcatc 203  Q
    | | |||||||||||||| |||| || |||||||    
T  30757681 ttcttttataactctaattaatactactttcatc 30757648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 185
Target Start/End: Complemental strand, 42881440 - 42881375
Alignment:
Q  121 tcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactcta 185  Q
    ||||||||| ||| | ||||||||||||| |||||||||||||| |||||||| |||| |||||||    
T  42881440 tcaaaataactgaatcatttcacttttcaatacaatattaattacttttttccttttacaactcta 42881375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 202
Target Start/End: Complemental strand, 18181361 - 18181294
Alignment:
Q  137 atttcacttttcagtacaatattaattattttttccct--ttataactctaatcaatattattttcat 202  Q
    ||||||||||||| ||||||||||||||||||||  ||  ||||||||||||| |||| || ||||||    
T  18181361 atttcacttttcaatacaatattaattattttttttctaattataactctaattaatactactttcat 18181294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 203
Target Start/End: Original strand, 6075420 - 6075525
Alignment:
Q  101 atttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta---ttttttccctttataactctaatcaatattatt 197  Q
    ||||||||||| | | ||||  |||| ||||||  |||||||||||||| ||||||| ||||||   ||||||||  ||||||||||||| |||| || |    
T  6075420 atttgcaaaaaaatattgtccaaaaaaaattgatctatttcacttttcactacaataataattatttttttttccaattataactctaattaatactact 6075519  T
Q  198 ttcatc 203  Q
    ||||||    
T  6075520 ttcatc 6075525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 201
Target Start/End: Original strand, 24451719 - 24451809
Alignment:
Q  113 aaagtgtctcaaaataattgagttatttcacttttcagtacaatattaattattttttc--cctttataactctaatcaatattattttca 201  Q
    ||||| || |||||||| | ||| |||||||||| || ||||||||||||||||||||   |  ||||||||||||| ||||||| |||||    
T  24451719 aaagtatcccaaaataactaagtcatttcactttccaatacaatattaattatttttttttcaattataactctaattaatattactttca 24451809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 203
Target Start/End: Complemental strand, 31546165 - 31546098
Alignment:
Q  137 atttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatattattttcatc 203  Q
    ||||||||||| | |||||||||||||| |||||| |  |||||||||||||||||| || |||||||    
T  31546165 atttcacttttaaatacaatattaattactttttttcaattataactctaatcaatactactttcatc 31546098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 170
Target Start/End: Original strand, 314330 - 314428
Alignment:
Q  72 tactcccttcgtcccacgataaataagtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaattatttttt 170  Q
    |||||||  |||||||  |||| | ||||||||||||||| | | ||||  | || ||||||   ||||||||||||| ||||||||||||||||||||    
T  314330 tactccccccgtcccataataactgagtcatttgcaaaaaaatattgtcctagaaaaattgatccatttcacttttcaatacaatattaattatttttt 314428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 170
Target Start/End: Original strand, 3199812 - 3199886
Alignment:
Q  97 agtcatttgcaaaaataa-agtgtctcaaaataattgagttatttcacttttcagtacaatattaattatttttt 170  Q
    ||||||||||||||  || | |||||||||| |||||| | ||| ||||||||| |||||||||||||| |||||    
T  3199812 agtcatttgcaaaagaaatattgtctcaaaaaaattgactcattgcacttttcaatacaatattaattacttttt 3199886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 203
Target Start/End: Complemental strand, 13375308 - 13375270
Alignment:
Q  165 ttttttccctttataactctaatcaatattattttcatc 203  Q
    |||||| |||||||||||||||| |||||||||||||||    
T  13375308 tttttttcctttataactctaattaatattattttcatc 13375270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 193
Target Start/End: Complemental strand, 43950599 - 43950529
Alignment:
Q  123 aaaataattgagttatttcacttttcagtacaatattaattattttttccctttataactctaatcaatat 193  Q
    ||||||| ||| ||||||||||||||| |  ||||||||||||||||| |  |||||||| |||| |||||    
T  43950599 aaaataactgacttatttcacttttcaatgtaatattaattatttttttcaattataactttaattaatat 43950529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 137 - 201
Target Start/End: Complemental strand, 1908641 - 1908576
Alignment:
Q  137 atttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatattattttca 201  Q
    |||||| |||||| ||||| |||||||| |||||| |  ||||||||||||| |||||||||||||    
T  1908641 atttcaattttcaatacaacattaattactttttttcaattataactctaattaatattattttca 1908576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 185
Target Start/End: Original strand, 19009791 - 19009855
Alignment:
Q  123 aaaataattgagttatttcacttttcagtacaatattaatta--ttttttccctttataactcta 185  Q
    |||||||||||   ||||||||||||| ||||||||||||||  |||||| | ||||||||||||    
T  19009791 aaaataattgatcaatttcacttttcaatacaatattaattacttttttttcatttataactcta 19009855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 122 - 202
Target Start/End: Original strand, 19515826 - 19515907
Alignment:
Q  122 caaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatattattttcat 202  Q
    ||||| ||||||  ||||||| ||||||||||||||| ||||| ||||| ||  ||||||||||||| |||| || ||||||    
T  19515826 caaaaaaattgacgtatttcatttttcagtacaatatcaattactttttaccaattataactctaattaatactactttcat 19515907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 134 - 203
Target Start/End: Original strand, 23684917 - 23684986
Alignment:
Q  134 gttatttcacttttcagtacaatattaattattttttccctttataactctaatcaatattattttcatc 203  Q
    ||||||| |||||||| |||| ||||||||||||||    |||||||||||||| |||| || |||||||    
T  23684917 gttattttacttttcaatacattattaattatttttcttttttataactctaattaatactactttcatc 23684986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 137 - 201
Target Start/End: Complemental strand, 37529218 - 37529153
Alignment:
Q  137 atttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatattattttca 201  Q
    |||||||||| || |||||||||||||| |||||| |  ||||||||||||| ||||||| |||||    
T  37529218 atttcactttccaatacaatattaattactttttttcaattataactctaattaatattactttca 37529153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 187
Target Start/End: Original strand, 14136727 - 14136775
Alignment:
Q  140 tcacttttcagtacaatattaatta-ttttttccctttataactctaat 187  Q
    |||||||||| |||||||||||||| ||||||||  |||||||||||||    
T  14136727 tcacttttcaatacaatattaattacttttttccaattataactctaat 14136775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 192
Target Start/End: Complemental strand, 36103597 - 36103541
Alignment:
Q  137 atttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaata 192  Q
    ||||||| ||||| |||||||||||||| ||||| |||||||| |||||||| ||||    
T  36103597 atttcacctttcaatacaatattaattactttttcccctttatgactctaattaata 36103541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 2e-26; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 72 - 203
Target Start/End: Original strand, 30462911 - 30463043
Alignment:
Q  72 tactcccttcgtcccacgataaataagtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-tttttt 170  Q
    |||||||| |||||||  |||| | ||||||||||||||| ||| ||||  ||||||||||||| ||||||||||||  |||||||||||| | ||||||    
T  30462911 tactccctccgtcccataataattgagtcatttgcaaaaaaaaaatgtcataaaataattgagtcatttcacttttccatacaatattaatgactttttt 30463010  T
Q  171 ccctttataactctaatcaatattattttcatc 203  Q
    || |||||||||||||| ||||||| |||||||    
T  30463011 ccttttataactctaattaatattactttcatc 30463043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 108 - 203
Target Start/End: Complemental strand, 45891012 - 45890917
Alignment:
Q  108 aaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaattattttttccctttataactctaatcaatattattttcatc 203  Q
    ||||||||||||| |||||||| ||||  ||||||||||||| ||||||| |||||||||||||||||||||||| |||| ||||||| |||||||    
T  45891012 aaaataaagtgtcacaaaataactgagcaatttcacttttcaatacaataataattattttttccctttataactataattaatattactttcatc 45890917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 72 - 201
Target Start/End: Original strand, 12308275 - 12308403
Alignment:
Q  72 tactcccttcgtcccacgataaataagtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaattattttttc 171  Q
    |||||||| |||||||| ||||   ||||||||| ||||| ||| ||||||||||||| ||||| |||||| |||||| |||||||||||||| |||||     
T  12308275 tactccctccgtcccacaataaccgagtcatttgaaaaaaaaaa-tgtctcaaaataactgagtcatttcaattttcaatacaatattaattactttttt 12308373  T
Q  172 cctttataactctaatcaatattattttca 201  Q
    | |||||||||||||| ||||||| |||||    
T  12308374 catttataactctaattaatattactttca 12308403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 103 - 203
Target Start/End: Complemental strand, 29434761 - 29434660
Alignment:
Q  103 ttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaattatttttt-ccctttataactctaatcaatattattttca 201  Q
    ||||||||| ||||||||||||||||| ||||| ||||| |||| || |||||||||||||||||||| ||||||||||||||||| |||| || |||||    
T  29434761 ttgcaaaaaaaaagtgtctcaaaataactgagtcatttcgctttccaatacaatattaattattttttcccctttataactctaattaatactactttca 29434662  T
Q  202 tc 203  Q
    ||    
T  29434661 tc 29434660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 72 - 201
Target Start/End: Complemental strand, 33774253 - 33774125
Alignment:
Q  72 tactcccttcgtcccacgataaataagtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaattattttttc 171  Q
    |||||||| |||| ||| |||| | |||||||| |||||| |||||||  |||||||| ||||| ||||||||||||| ||||||||||||||||||||     
T  33774253 tactccctccgtctcacaataactgagtcatttacaaaaaaaaagtgttccaaaataactgagtcatttcacttttcaatacaatattaattatttttt- 33774155  T
Q  172 cctttataactctaatcaatattattttca 201  Q
    ||||||||| |||||| |||| || |||||    
T  33774154 cctttataattctaattaatactactttca 33774125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 97 - 203
Target Start/End: Original strand, 29257467 - 29257574
Alignment:
Q  97 agtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatatta 195  Q
    |||||||| ||| || |||||||| |||||||| |||| |||||||||||||| ||||  |||||||| ||||||||||||||||||||||| |||||||    
T  29257467 agtcattttcaataaaaaagtgtcccaaaataagtgagctatttcacttttcaatacatcattaattacttttttccctttataactctaattaatatta 29257566  T
Q  196 ttttcatc 203  Q
     |||||||    
T  29257567 ctttcatc 29257574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 107 - 203
Target Start/End: Complemental strand, 34963988 - 34963891
Alignment:
Q  107 aaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatattattttcatc 203  Q
    ||||| ||| |||| |||||||| ||||| ||||||||||||| |||| ||||||||| ||||||||||||||||||||||| ||||||| |||||||    
T  34963988 aaaaaaaaaatgtcccaaaataactgagtcatttcacttttcaatacagtattaattacttttttccctttataactctaattaatattactttcatc 34963891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 72 - 203
Target Start/End: Complemental strand, 2846888 - 2846756
Alignment:
Q  72 tactcccttcgtcccacgataaataagtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-tttttt 170  Q
    |||||||| |||||||  |||| | |||||||| ||| || |||||||| |||||||| ||||| ||||||||||||| ||||  |||||||| ||||||    
T  2846888 tactccctccgtcccataataactgagtcattttcaataaaaaagtgtcccaaaataagtgagtcatttcacttttcaatacatcattaattactttttt 2846789  T
Q  171 ccctttataactctaatcaatattattttcatc 203  Q
    || |||||||||||||| |||| || |||||||    
T  2846788 ccttttataactctaattaatactactttcatc 2846756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 72 - 185
Target Start/End: Complemental strand, 7426089 - 7425976
Alignment:
Q  72 tactcccttcgtcccacgataaataagtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-tttttt 170  Q
    |||||||| |||||||| |||| | || ||||||||||||  ||||||| |||||||| ||||  ||||||||||||| |||||||||||||| ||||||    
T  7426089 tactccctccgtcccacaataactgagccatttgcaaaaa--aagtgtcccaaaataactgagccatttcacttttcaatacaatattaattactttttt 7425992  T
Q  171 ccctt-tataactcta 185  Q
    ||||| ||||||||||    
T  7425991 cccttatataactcta 7425976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 123 - 203
Target Start/End: Original strand, 37157117 - 37157197
Alignment:
Q  123 aaaataattgagttatttcacttttcagtacaatattaattattttttccctttataactctaatcaatattattttcatc 203  Q
    ||||||| |||| |||||||||||||| |||||||||||||||||||| | |||||||||||||| |||| | ||||||||    
T  37157117 aaaataactgagctatttcacttttcaatacaatattaattatttttttcttttataactctaattaatacttttttcatc 37157197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 114 - 192
Target Start/End: Original strand, 11616498 - 11616577
Alignment:
Q  114 aagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaata 192  Q
    ||||||| |||||||| ||||  ||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  11616498 aagtgtcccaaaataactgagccatttcacttttcaatacaatattaattacttttttccctttataactctaattaata 11616577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 107 - 184
Target Start/End: Complemental strand, 5083651 - 5083573
Alignment:
Q  107 aaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaattatt-ttttccctttataactct 184  Q
    ||||||||||||| ||||||||| ||||| ||||||||||||| || ||||||||||||| |||||| |||||||||||    
T  5083651 aaaaataaagtgtttcaaaataagtgagtcatttcacttttcaatataatattaattatttttttccttttataactct 5083573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 137 - 203
Target Start/End: Original strand, 36117622 - 36117688
Alignment:
Q  137 atttcacttttcagtacaatattaattattttttccctttataactctaatcaatattattttcatc 203  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||| | |||||||    
T  36117622 atttcacttttcaatacaatattaattattttttccctttataactttaattaatatcactttcatc 36117688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 107 - 192
Target Start/End: Original strand, 39693721 - 39693807
Alignment:
Q  107 aaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaata 192  Q
    ||||| |||||||| |||||||| ||||| ||||||||||||| ||||  |||||||| ||||||||||||||||||||||| ||||    
T  39693721 aaaaaaaaagtgtcccaaaataagtgagtcatttcacttttcaatacatcattaattacttttttccctttataactctaattaata 39693807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 97 - 202
Target Start/End: Complemental strand, 46288617 - 46288512
Alignment:
Q  97 agtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatatta 195  Q
    ||||||||| ||||| ||| |||| |||||||| ||||  ||||||||||||| || ||||||||||| ||||||||||||||||||||||| |||| ||    
T  46288617 agtcatttgtaaaaaaaaa-tgtcccaaaataactgagccatttcacttttcaatataatattaattaattttttccctttataactctaattaatacta 46288519  T
Q  196 ttttcat 202  Q
     ||||||    
T  46288518 ctttcat 46288512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 102 - 164
Target Start/End: Original strand, 48981304 - 48981366
Alignment:
Q  102 tttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta 164  Q
    ||||||||||||||||||| |||||||| ||||| ||||||||||||| ||||||||||||||    
T  48981304 tttgcaaaaataaagtgtcccaaaataactgagtcatttcacttttcaatacaatattaatta 48981366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 123 - 203
Target Start/End: Complemental strand, 31581604 - 31581523
Alignment:
Q  123 aaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatattattttcatc 203  Q
    ||||||| ||||| ||||||||||||| |||||||||||||| |||||||| |||||||||||||| |||| || |||||||    
T  31581604 aaaataactgagtcatttcacttttcaatacaatattaattacttttttccatttataactctaattaatactactttcatc 31581523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 201
Target Start/End: Complemental strand, 5068510 - 5068380
Alignment:
Q  72 tactcccttcgtcccacgataaataagtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-tttttt 170  Q
    ||||||||||||||||  |||| | ||||||||| ||||||| | |||| ||| |  ||||| | ||||||||||| | ||||||| |||||| ||||||    
T  5068510 tactcccttcgtcccataataagtgagtcatttgtaaaaatatattgtcccaagaatattgactcatttcactttttaatacaatactaattactttttt 5068411  T
Q  171 ccctttataactctaatcaatattattttca 201  Q
    ||  ||||||||||||| ||||||| |||||    
T  5068410 ccaattataactctaattaatattactttca 5068380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 72 - 203
Target Start/End: Original strand, 33584457 - 33584590
Alignment:
Q  72 tactcccttcgtcccacgataaataagtcatttgcaa-aaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttt 169  Q
    |||||||| |||||||  |||| | || ||||| ||| ||| ||||||||||||||||| ||||  ||||||||||| | ||||  |||||||| |||||    
T  33584457 tactccctccgtcccataataactgaggcattttcaataaaaaaagtgtctcaaaataactgagccatttcacttttgaatacatcattaattacttttt 33584556  T
Q  170 tccctttataactctaatcaatattattttcatc 203  Q
    ||||||||||||| |||| |||| || |||||||    
T  33584557 tccctttataactataattaatactactttcatc 33584590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 117 - 192
Target Start/End: Complemental strand, 40590992 - 40590916
Alignment:
Q  117 tgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaata 192  Q
    |||| |||||||| ||||| ||||||||||| | |||||||||||||| |||||||| |||||||||||||| ||||    
T  40590992 tgtcccaaaataactgagtcatttcacttttaaatacaatattaattacttttttccttttataactctaattaata 40590916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 107 - 197
Target Start/End: Complemental strand, 7456764 - 7456673
Alignment:
Q  107 aaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaattat-tttttccctttataactctaatcaatattatt 197  Q
    ||||||||| ||| ||||||||| | ||| ||||||| ||||| ||||||||||||||| ||||||| |||| ||||||||| |||| ||||    
T  7456764 aaaaataaaatgtttcaaaataactaagtcatttcacatttcaatacaatattaattatatttttccttttacaactctaattaatagtatt 7456673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 107 - 201
Target Start/End: Complemental strand, 38182051 - 38181956
Alignment:
Q  107 aaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaattattt-tttccctttataactctaatcaatattattttca 201  Q
    ||||| ||||| || |||||||| ||||| |||| |||||||| || |||||||||||||| |||| ||||||||||||||| |||| || |||||    
T  38182051 aaaaaaaaagtttcccaaaataactgagtcattttacttttcaataaaatattaattatttctttctctttataactctaattaatactactttca 38181956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 124 - 203
Target Start/End: Complemental strand, 40038270 - 40038191
Alignment:
Q  124 aaataattgagttatttcacttttcagtacaatattaattattttttccctttataactctaatcaatattattttcatc 203  Q
    |||||| ||||| ||||||||||||| || |  |||||||||||||| |||||||||||||||| |||| || |||||||    
T  40038270 aaataagtgagtcatttcacttttcaatatatcattaattatttttttcctttataactctaattaatactactttcatc 40038191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 113 - 203
Target Start/End: Complemental strand, 44604648 - 44604557
Alignment:
Q  113 aaagtgtctcaaaataattgagttatttcacttttcagtacaatattaattat-tttttccctttataactctaatcaatattattttcatc 203  Q
    |||||||| |||||||| ||||  ||||||||||||| ||||  ||||||||| ||||||| |||||||||||||| |||| || |||||||    
T  44604648 aaagtgtcccaaaataagtgagccatttcacttttcaatacatcattaattatgtttttccttttataactctaattaatactactttcatc 44604557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 203
Target Start/End: Original strand, 8149889 - 8149986
Alignment:
Q  107 aaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatattattttcatc 203  Q
    ||||| ||| ||||| ||||  ||||| | |||||| |||||| |||||||||||||| ||||||||  ||||||||||||| ||||||| |||||||    
T  8149889 aaaaaaaaattgtcttaaaaatattgattcatttcatttttcaatacaatattaattacttttttccaattataactctaattaatattactttcatc 8149986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 170
Target Start/End: Complemental strand, 21412222 - 21412153
Alignment:
Q  101 atttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaattatttttt 170  Q
    ||||||| ||| ||| |||||||||| | |||| | ||||||||||||| ||||||||||||||||||||    
T  21412222 atttgcataaaaaaattgtctcaaaaaagttgattcatttcacttttcaatacaatattaattatttttt 21412153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 192
Target Start/End: Complemental strand, 46095658 - 46095539
Alignment:
Q  72 tactcccttcgtcccacgataaataagtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatt-atttttt 170  Q
    ||||| || |||||||  |||| |||||| |||||||||| ||| | || ||||||||  |||| ||||||||||||| ||||||||||||| |||||||    
T  46095658 tactctctccgtcccataataactaagtcgtttgcaaaaaaaaaat-tc-caaaataaccgagtcatttcacttttcaatacaatattaattaatttttt 46095561  T
Q  171 ccctttataactctaatcaata 192  Q
    |  |||||||||||||| ||||    
T  46095560 cattttataactctaattaata 46095539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 47453950 - 47454015
Alignment:
Q  123 aaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaat 187  Q
    ||||||||||||  ||||||||||||| |||||||||||| | |||||||||||||||||| ||||    
T  47453950 aaaataattgagccatttcacttttcaatacaatattaatcatttttttccctttataactataat 47454015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 170
Target Start/End: Complemental strand, 28923404 - 28923341
Alignment:
Q  107 aaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaattatttttt 170  Q
    ||||| ||| ||||| ||||||| ||| |||||||| |||||| ||||||||||||||||||||    
T  28923404 aaaaaaaaattgtcttaaaataactgacttatttcatttttcaatacaatattaattatttttt 28923341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 137 - 195
Target Start/End: Complemental strand, 27338019 - 27337961
Alignment:
Q  137 atttcacttttcagtacaatattaattattttttccctttataactctaatcaatatta 195  Q
    ||||||||||||| ||||| ||||||||||||||||  |||||||| |||| |||||||    
T  27338019 atttcacttttcaatacaacattaattattttttccaattataactttaattaatatta 27337961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 170
Target Start/End: Original strand, 25778677 - 25778730
Alignment:
Q  117 tgtctcaaaataattgagttatttcacttttcagtacaatattaattatttttt 170  Q
    |||||||||| |||||| ||||||||||||||| ||||||  ||||||||||||    
T  25778677 tgtctcaaaaaaattgacttatttcacttttcaatacaatgataattatttttt 25778730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 157
Target Start/End: Complemental strand, 49100978 - 49100921
Alignment:
Q  100 catttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaata 157  Q
    |||||| ||||| ||| ||||||||||||||||||| |||| |||||||| |||||||    
T  49100978 catttgtaaaaaaaaaatgtctcaaaataattgagtcattttacttttcaatacaata 49100921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 192
Target Start/End: Complemental strand, 5724874 - 5724798
Alignment:
Q  117 tgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaata 192  Q
    |||| |||||||| ||||  ||||||||||||| |||||||||||| | |||||| | |||||||||||||| ||||    
T  5724874 tgtcccaaaataagtgagccatttcacttttcaatacaatattaatcactttttttcttttataactctaattaata 5724798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 203
Target Start/End: Original strand, 28333114 - 28333198
Alignment:
Q  120 ctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatattattttcatc 203  Q
    ||||||| |||||| | ||||||||||||| ||||| | |||||| ||||||||   |||||||||||| ||||||| |||||||    
T  28333114 ctcaaaaaaattgattcatttcacttttcaatacaacaataattacttttttccaaatataactctaattaatattactttcatc 28333198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 203
Target Start/End: Complemental strand, 37496609 - 37496477
Alignment:
Q  72 tactcccttcgtcccacgataaataagtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-tttttt 170  Q
    |||||||| |||||||  |||| | ||||||||||||||| | | | || ||||| ||||||   |||||||||||||  |||| |||||||| ||||||    
T  37496609 tactccctccgtcccataataactgagtcatttgcaaaaaaatattatcccaaaaaaattgacccatttcacttttcaacacaacattaattactttttt 37496510  T
Q  171 ccctttataactctaatcaatattattttcatc 203  Q
    ||  |||||||| |||| |||| || |||||||    
T  37496509 ccaattataactttaattaatactactttcatc 37496477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 203
Target Start/End: Complemental strand, 40023887 - 40023807
Alignment:
Q  123 aaaataattgagttatttcacttttcagtacaatattaattattttttccctttataactctaatcaatattattttcatc 203  Q
    |||| |||||| | ||||||||||||| |||||||||||||| |||||    ||||||||||||| |||| || |||||||    
T  40023887 aaaaaaattgactcatttcacttttcaatacaatattaattactttttttaattataactctaattaatagtaatttcatc 40023807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 203
Target Start/End: Original strand, 18235179 - 18235217
Alignment:
Q  165 ttttttccctttataactctaatcaatattattttcatc 203  Q
    ||||||||||||||| ||||||| |||||||||||||||    
T  18235179 ttttttccctttatagctctaattaatattattttcatc 18235217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 146
Target Start/End: Complemental strand, 26938651 - 26938577
Alignment:
Q  72 tactcccttcgtcccacgataaataagtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttt 146  Q
    |||||||| |||||||| |||  | ||||||||||||| | |||||||| |||||||| | ||| ||||||||||    
T  26938651 tactccctccgtcccacaatagctgagtcatttgcaaataaaaagtgtcccaaaataacttagtcatttcacttt 26938577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 137 - 202
Target Start/End: Complemental strand, 1099232 - 1099167
Alignment:
Q  137 atttcacttttcagtacaatattaattattttttccctttataactctaatcaatattattttcat 202  Q
    ||||||||||||| |  ||| ||||||||||||| |  |||||||| |||| ||||||||||||||    
T  1099232 atttcacttttcaatgtaatcttaattatttttttcaattataactttaattaatattattttcat 1099167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 97 - 192
Target Start/End: Original strand, 23703835 - 23703932
Alignment:
Q  97 agtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaat-attaatta-ttttttccctttataactctaatcaata 192  Q
    ||||||||| ||||| ||||| ||  ||||||| ||| | |||| ||||| || |||||| |||||||| |||||||| |||||||||||||| ||||    
T  23703835 agtcatttgtaaaaaaaaagtatcataaaataactgaatcattttactttccaatacaattattaattacttttttccatttataactctaattaata 23703932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 117 - 170
Target Start/End: Original strand, 27621774 - 27621827
Alignment:
Q  117 tgtctcaaaataattgagttatttcacttttcagtacaatattaattatttttt 170  Q
    |||||||||| |||||| | ||||||||||||| |||||||| ||||| |||||    
T  27621774 tgtctcaaaaaaattgattcatttcacttttcaatacaatatcaattacttttt 27621827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 137 - 166
Target Start/End: Complemental strand, 29792289 - 29792260
Alignment:
Q  137 atttcacttttcagtacaatattaattatt 166  Q
    ||||||||||||||||||||||||||||||    
T  29792289 atttcacttttcagtacaatattaattatt 29792260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 137 - 201
Target Start/End: Complemental strand, 30659627 - 30659562
Alignment:
Q  137 atttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatattattttca 201  Q
    ||||||||||||| ||||| |||||||| ||||||||  ||||||||||||| |||| || |||||    
T  30659627 atttcacttttcaatacaacattaattacttttttccaattataactctaattaatactactttca 30659562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 137 - 201
Target Start/End: Original strand, 37264273 - 37264338
Alignment:
Q  137 atttcacttttcagtacaatattaattattttttcc-ctttataactctaatcaatattattttca 201  Q
    ||||||||||||| |||||||||||||| |||||||   ||||||||||||| |||| || |||||    
T  37264273 atttcacttttcaatacaatattaattactttttcctaattataactctaattaatactactttca 37264338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 164
Target Start/End: Complemental strand, 37491067 - 37491026
Alignment:
Q  123 aaaataattgagttatttcacttttcagtacaatattaatta 164  Q
    ||||||| |||||||||| |||||||| ||||||||||||||    
T  37491067 aaaataactgagttattttacttttcaatacaatattaatta 37491026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 203
Target Start/End: Complemental strand, 14649070 - 14648999
Alignment:
Q  135 ttatttcacttttcagtacaatat--taatta-ttttttccctttataactctaatcaatattattttcatc 203  Q
    |||||| |||||||| ||||||||  |||||| ||||||||  ||||||||||||| ||||||| |||||||    
T  14649070 ttattttacttttcaatacaatatattaattacttttttccaattataactctaattaatattactttcatc 14648999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 201
Target Start/End: Complemental strand, 23111724 - 23111612
Alignment:
Q  90 ataaataagtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatc 188  Q
    |||||||||||||||||||||| | | ||||  | || |||||  | |||| |||||||| || ||||||||||| ||||||||  ||||||| |||||     
T  23111724 ataaataagtcatttgcaaaaaaatattgtccgagaaaaattggttaattttacttttcaatataatattaattacttttttccaattataacactaatt 23111625  T
Q  189 aatattattttca 201  Q
    |||| || |||||    
T  23111624 aatactactttca 23111612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 186
Target Start/End: Original strand, 32775877 - 32775993
Alignment:
Q  72 tactcccttcgtcccacgataaataagtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtac-aatattaatta-ttttt 169  Q
    |||||||| |||||||  |||| | || |||||||||||| | | |||| ||||| ||||||   |||||||||| || ||| ||||||||||| |||||    
T  32775877 tactccctccgtcccataataactgaggcatttgcaaaaaaatattgtcccaaaaaaattgacccatttcactttccaatacaaatattaattacttttt 32775976  T
Q  170 tccctttataactctaa 186  Q
    |||  ||||||||||||    
T  32775977 tccaattataactctaa 32775993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 203
Target Start/End: Original strand, 34064110 - 34064242
Alignment:
Q  72 tactcccttcgtcccacgataaataagtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-tttttt 170  Q
    |||||||| |||||||  |||| | ||||||||||||||| | | |||| | ||| |||||| | |||| |||||| | ||||| | || ||| ||||||    
T  34064110 tactccctccgtcccataataacttagtcatttgcaaaaaaatattgtcccgaaaaaattgactcattttactttttaatacaacaatagttactttttt 34064209  T
Q  171 ccctttataactctaatcaatattattttcatc 203  Q
     |  ||||||||||||| ||||||| |||||||    
T  34064210 acaattataactctaattaatattactttcatc 34064242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 4e-25; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 99 - 201
Target Start/End: Original strand, 31265702 - 31265804
Alignment:
Q  99 tcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaattattttttccctttataactctaatcaatattattt 198  Q
    ||||||||| ||| |||  |||||||||||| | ||| ||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||||| ||    
T  31265702 tcatttgcagaaaaaaaaagtctcaaaataacttagtcatttcacttttcaatacaatattaattatttttttcctttataactctaattaatattactt 31265801  T
Q  199 tca 201  Q
    |||    
T  31265802 tca 31265804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 71 - 201
Target Start/End: Complemental strand, 3604813 - 3604682
Alignment:
Q  71 ttactcccttcgtcccacgataaataagtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaattatt-ttt 169  Q
    ||||||||| |||||||| ||||   || |||||| ||| | ||| ||||  ||||||| ||||| ||||||||||||| |||||||||||||||| |||    
T  3604813 ttactccctccgtcccacaataacagagccatttgtaaataaaaaatgtcctaaaataactgagtcatttcacttttcaatacaatattaattatttttt 3604714  T
Q  170 tccctttataactctaatcaatattattttca 201  Q
    |||||||||||||||||| ||||||| |||||    
T  3604713 tccctttataactctaattaatattactttca 3604682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 72 - 203
Target Start/End: Complemental strand, 30064160 - 30064029
Alignment:
Q  72 tactcccttcgtcccacgataaataagtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-tttttt 170  Q
    |||||| | |||||||  |||| | ||||| ||||||||| ||| ||||  ||||||| ||||| |||||||||| || |||||||||||||| ||||||    
T  30064160 tactccttccgtcccataataattgagtcaattgcaaaaaaaaa-tgtcctaaaataactgagtcatttcactttccaatacaatattaattactttttt 30064062  T
Q  171 ccctttataactctaatcaatattattttcatc 203  Q
    ||||||||||||||||| ||||||| |||||||    
T  30064061 ccctttataactctaattaatattactttcatc 30064029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 97 - 202
Target Start/End: Original strand, 15081343 - 15081449
Alignment:
Q  97 agtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatatta 195  Q
    |||||| ||| |||| |||||||| |||||||| |||   ||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||| ||    
T  15081343 agtcatctgcgaaaaaaaagtgtcccaaaataactgaacaatttcacttttcaatacaatattaattacttttttccctttataactctaattaatacta 15081442  T
Q  196 ttttcat 202  Q
     ||||||    
T  15081443 ctttcat 15081449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 125 - 203
Target Start/End: Complemental strand, 7301239 - 7301160
Alignment:
Q  125 aataattgagttatttcacttttcagtacaatattaattatt-ttttccctttataactctaatcaatattattttcatc 203  Q
    |||||| |||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||  ||||||| |||||||    
T  7301239 aataatagagtcatttcacttttcaatacaatattaattatttttttccctttataactctaactaatattactttcatc 7301160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 137 - 203
Target Start/End: Complemental strand, 9755293 - 9755227
Alignment:
Q  137 atttcacttttcagtacaatattaattattttttccctttataactctaatcaatattattttcatc 203  Q
    ||||||||||||| |||||||||||||| ||||| ||||||||||| |||| |||||||||||||||    
T  9755293 atttcacttttcaatacaatattaattacttttttcctttataactgtaattaatattattttcatc 9755227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 72 - 203
Target Start/End: Original strand, 33109268 - 33109400
Alignment:
Q  72 tactcccttcgtcccacgataaataagtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-tttttt 170  Q
    |||||||| |||||||  |||| | ||  ||||||||||| |||||||  ||||| || ||||  |||| |||||||| ||||||| |||||| ||||||    
T  33109268 tactccctccgtcccataataactgagctatttgcaaaaaaaaagtgttccaaaacaactgagccattttacttttcaatacaatactaattattttttt 33109367  T
Q  171 ccctttataactctaatcaatattattttcatc 203  Q
    || |||||||||||||| |||| || |||||||    
T  33109368 ccatttataactctaattaatactactttcatc 33109400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 182
Target Start/End: Complemental strand, 34915968 - 34915903
Alignment:
Q  118 gtctcaaaataattgagttatttcacttttcagtacaatattaa-ttattttttccctttataact 182  Q
    |||||||||||| ||||| ||||||||||||| || |||||||| || ||||||||||||||||||    
T  34915968 gtctcaaaataactgagtcatttcacttttcaataaaatattaattttttttttccctttataact 34915903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 192
Target Start/End: Original strand, 4238327 - 4238438
Alignment:
Q  82 gtcccacgataaataagtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataa 180  Q
    |||| ||||||| | || |||||| || || ||||||||  ||||||||||||| |||| |  ||||| |||||||||||||| ||||||| ||||||||    
T  4238327 gtcctacgataattgagccatttgtaagaaaaaagtgtcctaaaataattgagtcattttatctttcaatacaatattaattatttttttctctttataa 4238426  T
Q  181 ctctaatcaata 192  Q
    || |||| ||||    
T  4238427 ctttaattaata 4238438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 100 - 170
Target Start/End: Original strand, 4552825 - 4552895
Alignment:
Q  100 catttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaattatttttt 170  Q
    |||||||||||| | | ||||||| || |||||| | ||||||||||||| |||||||||||||| |||||    
T  4552825 catttgcaaaaaaatattgtctcagaaaaattgactcatttcacttttcaatacaatattaattacttttt 4552895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 72 - 162
Target Start/End: Original strand, 7359138 - 7359228
Alignment:
Q  72 tactcccttcgtcccacgataaataagtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaat 162  Q
    |||| ||| ||| |||| |||||| || |||||||||||| ||| |||| |||||||| |||   ||||||||||||| ||||||||||||    
T  7359138 tacttcctccgttccacaataaatgagccatttgcaaaaaaaaaatgtcccaaaataactgaaccatttcacttttcaatacaatattaat 7359228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 202
Target Start/End: Original strand, 31723453 - 31723520
Alignment:
Q  136 tatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatattattttcat 202  Q
    |||||||||||||| |||||||||||||| |||||| |  |||||| | |||| ||||||||||||||    
T  31723453 tatttcacttttcaatacaatattaattactttttttcaattataattataattaatattattttcat 31723520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 6e-24; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 72 - 203
Target Start/End: Complemental strand, 32023312 - 32023181
Alignment:
Q  72 tactcccttcgtcccacgataaataagtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaattatt-tttt 170  Q
    ||||||||||||||||  |||| | ||||| ||||||||| |||  |||  ||||||| ||||| |||||||||| || |||||||||||||||| ||||    
T  32023312 tactcccttcgtcccataataactgagtcaattgcaaaaaaaaaa-gtcctaaaataactgagtcatttcactttccaatacaatattaattattttttt 32023214  T
Q  171 ccctttataactctaatcaatattattttcatc 203  Q
    ||||||||||||||||| ||||||| |||||||    
T  32023213 ccctttataactctaattaatattactttcatc 32023181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 72 - 203
Target Start/End: Complemental strand, 38601017 - 38600886
Alignment:
Q  72 tactcccttcgtcccacgataaataagtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaattattttttc 171  Q
    |||||||| |||||||  |||| | ||||||||||||||| ||| |||   ||||||||||||| ||||||| ||||| |||||||||||||| | ||||    
T  38601017 tactccctccgtcccataataactgagtcatttgcaaaaaaaaattgttctaaaataattgagtcatttcacctttcaatacaatattaattactctttc 38600918  T
Q  172 cctttataactctaatcaatattattttcatc 203  Q
    | |||||||||||||| |||| || |||||||    
T  38600917 catttataactctaattaatactactttcatc 38600886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 71 - 201
Target Start/End: Complemental strand, 54122435 - 54122306
Alignment:
Q  71 ttactcccttcgtcccacgataaataagtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttt 169  Q
    ||||||||| ||||||||||||| ||||||||||  ||||| |||||||| |||||||| | ||| ||||||||||||| || || |||||||| |||||    
T  54122435 ttactccctccgtcccacgataactaagtcattt-taaaaaaaaagtgtcccaaaataacttagtcatttcacttttcaatataa-attaattacttttt 54122338  T
Q  170 tccctttataactctaatcaatattattttca 201  Q
    ||| ||||||||||||||||||| || |||||    
T  54122337 tccttttataactctaatcaatactactttca 54122306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 106 - 203
Target Start/End: Original strand, 41031501 - 41031599
Alignment:
Q  106 caaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatattattttcatc 203  Q
    |||||| |||||||| |||||||||||||| ||||||||||||| |||||||||||||| |||||||| ||||||||| |||| |||| || |||||||    
T  41031501 caaaaaaaaagtgtcgcaaaataattgagtcatttcacttttcaatacaatattaattacttttttccatttataactttaattaatactactttcatc 41031599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 97 - 201
Target Start/End: Complemental strand, 21585597 - 21585492
Alignment:
Q  97 agtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaattattttttccc-tttataactctaatcaatatta 195  Q
    |||||||| ||| || |||||||| |||||||| ||||| |||||||||| || |||||||||||||||||||||||  ||||||||||||| |||||||    
T  21585597 agtcattttcaataaaaaagtgtcccaaaataactgagtcatttcactttccaatacaatattaattattttttcccaattataactctaattaatatta 21585498  T
Q  196 ttttca 201  Q
     |||||    
T  21585497 ctttca 21585492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 72 - 203
Target Start/End: Complemental strand, 39365229 - 39365097
Alignment:
Q  72 tactcccttcgtcccacgataaataagtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-tttttt 170  Q
    |||||||| |||||||  |||| | || ||||| | |||| |||||||| |||||||| ||||  |||||| |||||| |||||||||||||| |||||     
T  39365229 tactccctccgtcccataataactgagccatttaccaaaaaaaagtgtcccaaaataactgagccatttcaattttcaatacaatattaattactttttc 39365130  T
Q  171 ccctttataactctaatcaatattattttcatc 203  Q
    ||||||||||||||||| |||| ||||||||||    
T  39365129 ccctttataactctaattaatactattttcatc 39365097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 71 - 187
Target Start/End: Original strand, 51164843 - 51164962
Alignment:
Q  71 ttactcccttcgtcccacgataaataagtcatttgcaaaaataaa---gtgtctcaaaataattgagttatttcacttttcagtacaatattaattattt 167  Q
    ||||||||| |||||||  |||| | || |||||||||||| |||   ||||   |||||||| |||| ||||||||||||| |||||||||||||| ||    
T  51164843 ttactccctccgtcccataataactcagccatttgcaaaaaaaaaaaagtgttataaaataatcgagtcatttcacttttcaatacaatattaattactt 51164942  T
Q  168 tttccctttataactctaat 187  Q
    ||||||||||||||||||||    
T  51164943 tttccctttataactctaat 51164962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 81 - 201
Target Start/End: Complemental strand, 21296712 - 21296585
Alignment:
Q  81 cgtcccacgataaataagtcatttgcaaaaataaa------gtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccc 173  Q
    |||||||| |||| | ||||||||||||||| |||      ||||||| |||||| ||||| ||||||||||||| |||||||||||||| ||||||||     
T  21296712 cgtcccacaataactgagtcatttgcaaaaaaaaaaaaatggtgtctcgaaataactgagtcatttcacttttcaatacaatattaattacttttttcct 21296613  T
Q  174 tttataactctaatcaatattattttca 201  Q
    |||||||||||||| |||| || |||||    
T  21296612 tttataactctaattaatactactttca 21296585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 100 - 202
Target Start/End: Original strand, 48744148 - 48744251
Alignment:
Q  100 catttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatattattt 198  Q
    |||||||||||| |||  ||| |||||||| | ||| |||| |||||| | |||||||||||||| ||||||| ||||||||||||||| ||||||| ||    
T  48744148 catttgcaaaaaaaaaaagtcccaaaataactaagtcattttactttttaatacaatattaattacttttttctctttataactctaattaatattactt 48744247  T
Q  199 tcat 202  Q
    ||||    
T  48744248 tcat 48744251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 97 - 203
Target Start/End: Complemental strand, 3862358 - 3862252
Alignment:
Q  97 agtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaattattttttccctttataactctaatcaatattat 196  Q
    ||||||||||||||| ||| | | | ||||||||| | | ||||||||||||| |||||| ||||||| ||||| |  ||||||||||||| |||||||     
T  3862358 agtcatttgcaaaaaaaaattattttaaaataattaactcatttcacttttcaatacaattttaattacttttttcaattataactctaattaatattac 3862259  T
Q  197 tttcatc 203  Q
    |||||||    
T  3862258 tttcatc 3862252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 192
Target Start/End: Original strand, 33994603 - 33994673
Alignment:
Q  123 aaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaata 192  Q
    ||||||| ||||| ||||||||||||| ||||||||||| || ||||||||||||||||||||||| ||||    
T  33994603 aaaataactgagtcatttcacttttcaatacaatattaaatatttttttccctttataactctaattaata 33994673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 201
Target Start/End: Complemental strand, 54021618 - 54021540
Alignment:
Q  123 aaaataattgagttatttcacttttcagtacaatattaattattttttccctttataactctaatcaatattattttca 201  Q
    ||||||||| ||| ||||||||||||| || ||||||||||| ||||||||||||||| |||||| |||| || |||||    
T  54021618 aaaataattaagtcatttcacttttcaatataatattaattaatttttccctttataattctaattaatactactttca 54021540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 203
Target Start/End: Original strand, 54493854 - 54493935
Alignment:
Q  122 caaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatattattttcatc 203  Q
    |||||||| ||||  ||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||| || |||||||    
T  54493854 caaaataactgagccatttcacttttca-tacaatattaattacttttttccctttataactctaattaatactactttcatc 54493935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 72 - 201
Target Start/End: Complemental strand, 1334987 - 1334863
Alignment:
Q  72 tactcccttcgtcccacgataaataagtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaattattttttc 171  Q
    |||||||| |||||||  |||| | ||||||||||||||| ||  |||   ||||||||||||| |||||||||||||     |||||||||| |||||     
T  1334987 tactccctccgtcccataataactgagtcatttgcaaaaaaaagttgttctaaaataattgagtcatttcacttttca-----atattaattactttttt 1334893  T
Q  172 cctttataactctaatcaatattattttca 201  Q
    |||||||||||||||| |||| || |||||    
T  1334892 cctttataactctaattaatactactttca 1334863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 203
Target Start/End: Original strand, 49003217 - 49003297
Alignment:
Q  124 aaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatattattttcatc 203  Q
    |||||| ||||| |||| |||||||| |||||||||||||| ||||||| |||||||||||| || |||||| ||||||||    
T  49003217 aaataagtgagtcattttacttttcaatacaatattaattacttttttctctttataactctcattaatattcttttcatc 49003297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 203
Target Start/End: Complemental strand, 36097843 - 36097735
Alignment:
Q  97 agtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaattattt--tttccctttataactctaatcaatatt 194  Q
    ||||||||||||||| |||||||| |||||||  ||||  ||||||||||||| | ||||||||||| |||  | || ||||||||| || || ||||||    
T  36097843 agtcatttgcaaaaacaaagtgtcccaaaatatctgagccatttcacttttcaatgcaatattaatttttttctctctctttataacgctgattaatatt 36097744  T
Q  195 attttcatc 203  Q
    | |||||||    
T  36097743 actttcatc 36097735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 203
Target Start/End: Complemental strand, 39329963 - 39329830
Alignment:
Q  71 ttactcccttcgtcccacgataaataagtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttt 169  Q
    ||||||||| |||||||  |||||| ||||||||||||||| | | ||||  |||| | |||| | ||||||||||||| ||||| | |||||| |||||    
T  39329963 ttactccctccgtcccataataaatgagtcatttgcaaaaaaatattgtcctaaaaaagttgactcatttcacttttcaatacaacaataattacttttt 39329864  T
Q  170 tccctttataactctaatcaatattattttcatc 203  Q
    |||  |||||| |||||| |||| || |||||||    
T  39329863 tccaattataattctaattaatactactttcatc 39329830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 203
Target Start/End: Original strand, 15280517 - 15280632
Alignment:
Q  90 ataaataagtcatttgcaa-aaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaat 187  Q
    |||||| |||||||| ||| ||| ||| | ||||||||||| ||| | ||||||||||||| ||||  |||||||| |||||||| |||||||| |||||    
T  15280517 ataaatgagtcattttcaataaaaaaaatatctcaaaataagtgaataatttcacttttcaatacatcattaattacttttttccttttataaccctaat 15280616  T
Q  188 caatattattttcatc 203  Q
     |||| || |||||||    
T  15280617 taatactactttcatc 15280632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 203
Target Start/End: Complemental strand, 24619079 - 24618992
Alignment:
Q  117 tgtctcaaaataattgagttatttcacttttcagtacaatattaattatt-ttttccctttataactctaatcaatattattttcatc 203  Q
    |||| ||||||||||||   ||||||||||| | |||| ||||||||||| ||||||  ||||||||||||| ||||||| |||||||    
T  24619079 tgtcgcaaaataattgatccatttcactttttaatacagtattaattatttttttccgattataactctaattaatattactttcatc 24618992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 203
Target Start/End: Complemental strand, 46786152 - 46786061
Alignment:
Q  113 aaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatattattttcatc 203  Q
    ||||||| ||||||||| |||| |||||||||||| | || ||||||||||| ||||||| |||||||||| || | |||| || |||||||    
T  46786152 aaagtgtttcaaaataactgagctatttcactttttaatataatattaattacttttttcgctttataactttagttaatactactttcatc 46786061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 72 - 166
Target Start/End: Original strand, 12744708 - 12744802
Alignment:
Q  72 tactcccttcgtcccacgataaataagtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaattatt 166  Q
    |||||||| |||||||  |||| | || ||||| | |||| |||||||| ||||||| |||||  ||||||||||||| | ||||||||||||||    
T  12744708 tactccctccgtcccataataactgagccattttctaaaacaaagtgtcccaaaatatttgagccatttcacttttcaatgcaatattaattatt 12744802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 107 - 192
Target Start/End: Complemental strand, 39866730 - 39866644
Alignment:
Q  107 aaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaata 192  Q
    ||||| |||||||  |||||||||||||  |||| ||||| |  |||||||||||||| ||||| ||||||||||||||||| ||||    
T  39866730 aaaaaaaaagtgttccaaaataattgagccattttactttcctatacaatattaattactttttcccctttataactctaattaata 39866644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 117 - 202
Target Start/End: Complemental strand, 44219200 - 44219114
Alignment:
Q  117 tgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatattattttcat 202  Q
    |||| ||| ||||||||  ||| |||||||||| | |||||||||||| ||||||||  ||||||||||||| |||| |||||||||    
T  44219200 tgtcccaagataattgacatatatcacttttcaatgcaatattaattacttttttccaattataactctaattaatactattttcat 44219114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 117 - 200
Target Start/End: Complemental strand, 54458477 - 54458392
Alignment:
Q  117 tgtctcaaaataattgagttatttcacttttcagtacaatattaatta--ttttttccctttataactctaatcaatattattttc 200  Q
    |||| |||||||| ||||| |||| |||||||| ||||||||||||||  ||||||| |||||||||  |||| |||||| |||||    
T  54458477 tgtcccaaaataactgagtaattttacttttcaatacaatattaattactttttttctctttataaccttaattaatattgttttc 54458392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 192
Target Start/End: Original strand, 5245335 - 5245428
Alignment:
Q  100 catttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaattat-tttttccctttataactctaatcaata 192  Q
    ||||| ||| || |||||||  |||||||| ||||  ||||||||||||| ||||  ||||||||  |||||||||||||||||||||| ||||    
T  5245335 cattttcaataaaaaagtgttccaaaataagtgagccatttcacttttcaatacatgattaattacatttttccctttataactctaattaata 5245428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 203
Target Start/End: Original strand, 9017745 - 9017828
Alignment:
Q  123 aaaataattgagttatttcacttttcagtacaatattaatta---ttttttccctttataactctaatcaatattattttcatc 203  Q
    ||||||| |||||  |||||||||||| ||||||||||||||   |||||||||||||||| |  ||| |||||| ||||||||    
T  9017745 aaaataactgagtcgtttcacttttcaatacaatattaattacttttttttccctttataatttcaattaatattgttttcatc 9017828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 203
Target Start/End: Complemental strand, 30261686 - 30261582
Alignment:
Q  100 catttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaattattttttcc-ctttataactctaatcaatattattt 198  Q
    |||||||||||| | | |||| ||||| ||||||   ||||||||||||| ||||||| |||||| |||||||   ||||||||||||| |||| || ||    
T  30261686 catttgcaaaaaaatattgtcccaaaaaaattgacccatttcacttttcaatacaataataattactttttcctaattataactctaattaatactactt 30261587  T
Q  199 tcatc 203  Q
    |||||    
T  30261586 tcatc 30261582  T

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Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 170
Target Start/End: Complemental strand, 43640727 - 43640679
Alignment:
Q  122 caaaataattgagttatttcacttttcagtacaatattaattatttttt 170  Q
    |||||||| ||||| ||||||||||||| |||||||||||||| |||||    
T  43640727 caaaataactgagtcatttcacttttcaatacaatattaattacttttt 43640679  T

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Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 203
Target Start/End: Original strand, 2868534 - 2868601
Alignment:
Q  137 atttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatattattttcatc 203  Q
    ||||||||||||| |||||||||||||| |||||||   ||| ||||||||| ||||||| |||||||    
T  2868534 atttcacttttcaatacaatattaattatttttttctaattacaactctaattaatattactttcatc 2868601  T

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Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 172
Target Start/End: Original strand, 8498215 - 8498250
Alignment:
Q  137 atttcacttttcagtacaatattaattattttttcc 172  Q
    ||||||||||||| ||||||||||||||||||||||    
T  8498215 atttcacttttcaatacaatattaattattttttcc 8498250  T

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Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 203
Target Start/End: Original strand, 45746287 - 45746393
Alignment:
Q  99 tcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaattattttttc--cctttataactctaatcaatattat 196  Q
    ||||||||||||| | | |||| ||||| |||||| |||||||| |||||| ||||||| ||||| ||||||   |  ||||||||||||| |||| ||     
T  45746287 tcatttgcaaaaaaatattgtcacaaaaaaattgacttatttcagttttcaatacaataataattgtttttttttcaattataactctaattaatactac 45746386  T
Q  197 tttcatc 203  Q
    |||||||    
T  45746387 tttcatc 45746393  T

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Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 26134864 - 26134799
Alignment:
Q  123 aaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaat 187  Q
    ||||||| ||||| ||||||||||||| ||||  ||||| || |||||||| ||||||||||||||    
T  26134864 aaaataagtgagtcatttcacttttcaatacatcattaactacttttttccttttataactctaat 26134799  T

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Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 137 - 201
Target Start/End: Complemental strand, 46194353 - 46194288
Alignment:
Q  137 atttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatattattttca 201  Q
    ||||||||||||| |||||||||||||| ||||||||  ||||||| ||||| |||| || |||||    
T  46194353 atttcacttttcaatacaatattaattacttttttccaattataacactaattaatactactttca 46194288  T

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Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 137 - 201
Target Start/End: Complemental strand, 50150514 - 50150449
Alignment:
Q  137 atttcacttttcagtacaatattaa-ttattttttccctttataactctaatcaatattattttca 201  Q
    |||||||||| || ||||||||||| || ||||||||  |||||| |||||| |||||||||||||    
T  50150514 atttcactttacaatacaatattaattttttttttccaattataattctaattaatattattttca 50150449  T

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Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 202
Target Start/End: Complemental strand, 54845679 - 54845597
Alignment:
Q  123 aaaataattgagttatttcacttttcagtacaatattaatta---ttttttccctttataactctaatcaatattattttcat 202  Q
    ||||||| | ||| ||||||||||| | ||||||||||||||   |||||||  |||||||||||||| |||| || ||||||    
T  54845679 aaaataactaagtcatttcactttttaatacaatattaattatatttttttctatttataactctaattaatactactttcat 54845597  T

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Target: scaffold0007 (Bit Score: 53; Significance: 1e-21; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 121 - 201
Target Start/End: Original strand, 230201 - 230281
Alignment:
Q  121 tcaaaataattgagttatttcacttttcagtacaatattaattattttttccctttataactctaatcaatattattttca 201  Q
    ||||||||| ||||| ||||||||||||| |||||||||||||||||||| | |||||||||||||| ||||||| |||||    
T  230201 tcaaaataactgagtcatttcacttttcaatacaatattaattatttttttcttttataactctaattaatattactttca 230281  T

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Target: scaffold0007; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 195
Target Start/End: Original strand, 157947 - 158046
Alignment:
Q  97 agtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatatta 195  Q
    ||||||||||||||| | | ||||  |||| ||||||   ||||||||||||| |||||||||||||| |||||| |  ||||||||||||| |||||||    
T  157947 agtcatttgcaaaaaaatattgtcaaaaaaaaattgacccatttcacttttcaatacaatattaattattttttttcaattataactctaattaatatta 158046  T

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Target: scaffold0006 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 71 - 201
Target Start/End: Original strand, 229720 - 229848
Alignment:
Q  71 ttactcccttcgtcccacgataaataagtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaattatttttt 170  Q
    |||||| ||||||||||| |||| |  |||||||||||||| ||  |||| ||||||||  ||||||||||||||| || ||||||||||||||||||||    
T  229720 ttactctcttcgtcccacaataattgtgtcatttgcaaaaaaaa--tgtcccaaaataacagagttatttcacttt-caatacaatattaattatttttt 229816  T
Q  171 -ccctttataactctaatcaatattattttca 201  Q
     ||||||||||||||||| |||| || |||||    
T  229817 cccctttataactctaattaatactactttca 229848  T

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Target: scaffold0321 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 203
Target Start/End: Complemental strand, 9711 - 9629
Alignment:
Q  122 caaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatattattttcatc 203  Q
    ||||||||  |||| ||||||||||||| |||||||||||||| | ||||||||||||||||||||| |||| || |||||||    
T  9711 caaaataacagagtaatttcacttttcaatacaatattaattactattttccctttataactctaattaatactactttcatc 9629  T

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Target: scaffold0034 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 98803 - 98852
Alignment:
Q  154 aatattaattattttttccctttataactctaatcaatattattttcatc 203  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  98803 aatattaattactttttccctttataactctaattaatattattttcatc 98852  T

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Target: scaffold0034; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 97 - 161
Target Start/End: Original strand, 97979 - 98043
Alignment:
Q  97 agtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaa 161  Q
    |||||||||||||||  ||||||||||||||||  |||| ||||||||||||| || ||||||||    
T  97979 agtcatttgcaaaaaataagtgtctcaaaataaccgagtcatttcacttttcaatataatattaa 98043  T

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Target: scaffold0086 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 123 - 201
Target Start/End: Original strand, 5765 - 5843
Alignment:
Q  123 aaaataattgagttatttcacttttcagtacaatattaattattttttccctttataactctaatcaatattattttca 201  Q
    ||||||||||| |||||| | |||||| || ||||||||||||||||||| ||||||||| |||| |||| || |||||    
T  5765 aaaataattgaattattttatttttcaataaaatattaattattttttccatttataactttaattaatactactttca 5843  T

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Target: scaffold0155 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 201
Target Start/End: Complemental strand, 8166 - 8036
Alignment:
Q  71 ttactcccttcgtcccacgataaataagtcatttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaattatttttt 170  Q
    ||||||||| |||||||  |||| | ||||| |||  |||| | | |||||||||| ||||||  |||||||||||||| |||||||| ||||| |||||    
T  8166 ttactccctccgtcccataataactgagtcaattgttaaaaaatattgtctcaaaa-aattgacctatttcacttttcaatacaatatcaattacttttt 8068  T
Q  171 ccc-tttataactctaatcaatattattttca 201  Q
    |||  |||||||| |||| |||| || |||||    
T  8067 cccaattataactttaattaatactactttca 8036  T

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Target: scaffold0045 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 195
Target Start/End: Original strand, 26247 - 26341
Alignment:
Q  101 atttgcaaaaataaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatatta 195  Q
    ||||||||||| ||||||| ||||||||| | |   ||||||||||| | |  ||||||||||| |||||||| |||||||||||||| |||||||    
T  26247 atttgcaaaaa-aaagtgtttcaaaataactaaaccatttcactttttaattaaatattaattacttttttccttttataactctaattaatatta 26341  T

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Target: scaffold0001 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 203
Target Start/End: Original strand, 394715 - 394805
Alignment:
Q  113 aaagtgtctcaaaataattgagttatttcacttttcagtacaatattaatta-ttttttccctttataactctaatcaatattattttcatc 203  Q
    |||||||  |||||||| ||||| ||| |||| |||| ||||  |||||||| ||||||||||||||||||||||| |||| || |||||||    
T  394715 aaagtgttccaaaataagtgagtcatt-cactcttcaatacatcattaattacttttttccctttataactctaattaatactactttcatc 394805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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