View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4136_high_13 (Length: 276)
Name: NF4136_high_13
Description: NF4136
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4136_high_13 |
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Alignment Details
Target: chr6 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 258
Target Start/End: Complemental strand, 9070804 - 9070548
Alignment:
| Q |
1 |
ttatgcatacatgacttgtctagaaacaggcaataaggcaacgcatgttagctaaaagggttaaaggtgaccccaccataccattgcttccaaatcagtc |
100 |
Q |
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| T |
9070804 |
ttatgcatacatgacttgtctagaaacaggcaataaggcaatgcatgttagctaaaagg-ttaaaggtgaccccaccataccatagcttccaaatcagtc |
9070706 |
T |
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| Q |
101 |
catttccaattaggttaaacaatgaaactttcnnnnnnnggaaatatgaattttcaagaggtgagacataccattgcttaattttttattaattgagaga |
200 |
Q |
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| T |
9070705 |
catttccaattaggttaaacaatgaaactttctttttttggaaatatgaattttcaagaggtgagacataccattgcttaattttttattaattgagaga |
9070606 |
T |
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| Q |
201 |
attagtagcagaaggtgacatatgaactaaaatgaacaataatttataattttagaga |
258 |
Q |
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| T |
9070605 |
attagtagcagaaggtgacatatgaactaaaatgagcaataatttataattttagaga |
9070548 |
T |
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