View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4136_low_4 (Length: 468)

Name: NF4136_low_4
Description: NF4136
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4136_low_4
NF4136_low_4
[»] chr1 (2 HSPs)
chr1 (7-421)||(2557729-2558144)
chr1 (201-234)||(12891612-12891645)
[»] chr6 (4 HSPs)
chr6 (201-281)||(16477090-16477171)
chr6 (201-281)||(18860023-18860104)
chr6 (201-255)||(1786902-1786956)
chr6 (201-281)||(15052321-15052402)
[»] chr5 (3 HSPs)
chr5 (201-281)||(21825739-21825820)
chr5 (201-281)||(25904735-25904816)
chr5 (227-281)||(3153513-3153569)
[»] chr4 (41 HSPs)
chr4 (205-281)||(12182065-12182142)
chr4 (205-272)||(12180491-12180558)
chr4 (201-308)||(12184628-12184737)
chr4 (183-281)||(12177327-12177425)
chr4 (201-281)||(12170071-12170152)
chr4 (183-260)||(12189626-12189702)
chr4 (183-255)||(12178907-12178978)
chr4 (201-269)||(12180825-12180893)
chr4 (183-255)||(12184291-12184362)
chr4 (183-281)||(12189282-12189380)
chr4 (205-281)||(12174133-12174210)
chr4 (205-281)||(12178585-12178662)
chr4 (205-281)||(12183968-12184045)
chr4 (183-255)||(12182387-12182458)
chr4 (183-281)||(12184953-12185051)
chr4 (183-281)||(12185297-12185395)
chr4 (183-281)||(12186945-12187043)
chr4 (183-281)||(12187289-12187387)
chr4 (201-267)||(12169482-12169548)
chr4 (201-255)||(12172454-12172508)
chr4 (208-281)||(12172786-12172860)
chr4 (207-269)||(12173453-12173515)
chr4 (204-281)||(12174798-12174876)
chr4 (201-250)||(12169167-12169216)
chr4 (204-269)||(12182731-12182796)
chr4 (201-281)||(12188956-12189037)
chr4 (204-268)||(12169779-12169843)
chr4 (183-255)||(12173103-12173174)
chr4 (183-282)||(12186602-12186701)
chr4 (183-282)||(12188596-12188695)
chr4 (205-268)||(12173792-12173855)
chr4 (203-268)||(12170661-12170726)
chr4 (205-281)||(12175142-12175218)
chr4 (204-269)||(12179251-12179316)
chr4 (183-255)||(12174453-12174524)
chr4 (203-281)||(12170367-12170446)
chr4 (196-280)||(4374977-4375062)
chr4 (183-265)||(12176984-12177067)
chr4 (223-294)||(12186297-12186370)
chr4 (223-294)||(12188291-12188364)
chr4 (183-250)||(12170986-12171052)
[»] chr2 (52 HSPs)
chr2 (201-281)||(24621697-24621778)
chr2 (201-281)||(24622016-24622097)
chr2 (201-281)||(24622335-24622416)
chr2 (201-281)||(24622619-24622700)
chr2 (201-281)||(24622903-24622984)
chr2 (201-281)||(24623506-24623587)
chr2 (201-281)||(24623825-24623906)
chr2 (201-281)||(24624418-24624499)
chr2 (201-281)||(24624737-24624818)
chr2 (201-281)||(24625021-24625102)
chr2 (201-281)||(24625340-24625421)
chr2 (201-281)||(24626913-24626994)
chr2 (201-281)||(24631399-24631480)
chr2 (201-281)||(24631718-24631799)
chr2 (201-281)||(24632002-24632083)
chr2 (201-281)||(24632286-24632367)
chr2 (201-281)||(24632605-24632686)
chr2 (201-281)||(24632889-24632970)
chr2 (201-281)||(24633173-24633254)
chr2 (201-281)||(24633492-24633573)
chr2 (201-281)||(24633811-24633892)
chr2 (201-281)||(24634095-24634176)
chr2 (201-281)||(24634698-24634779)
chr2 (201-281)||(24638777-24638858)
chr2 (201-281)||(24639096-24639177)
chr2 (201-281)||(24623222-24623303)
chr2 (201-281)||(24627232-24627313)
chr2 (201-281)||(24627516-24627597)
chr2 (201-281)||(24631115-24631196)
chr2 (201-281)||(3348064-3348145)
chr2 (201-281)||(24625982-24626063)
chr2 (201-281)||(24634414-24634495)
chr2 (201-281)||(24638458-24638539)
chr2 (201-253)||(24626302-24626354)
chr2 (201-281)||(24620764-24620848)
chr2 (201-269)||(24619616-24619687)
chr2 (201-281)||(24621086-24621171)
chr2 (201-281)||(24621409-24621494)
chr2 (201-281)||(24625659-24625744)
chr2 (201-281)||(24626625-24626710)
chr2 (201-281)||(24635569-24635654)
chr2 (201-281)||(24636270-24636355)
chr2 (201-281)||(24636593-24636678)
chr2 (201-281)||(24637518-24637603)
chr2 (201-253)||(24637841-24637893)
chr2 (201-281)||(24639445-24639530)
chr2 (201-281)||(24639768-24639853)
chr2 (201-281)||(24640091-24640176)
chr2 (201-281)||(24635246-24635331)
chr2 (201-281)||(24636916-24637001)
chr2 (227-281)||(24630857-24630912)
chr2 (221-271)||(38802330-38802380)
[»] scaffold1024 (1 HSPs)
scaffold1024 (201-281)||(27-108)
[»] chr3 (4 HSPs)
chr3 (201-255)||(14903159-14903213)
chr3 (205-281)||(16990067-16990144)
chr3 (201-269)||(3732693-3732761)
chr3 (200-268)||(30729417-30729485)
[»] chr8 (3 HSPs)
chr8 (202-249)||(13642504-13642551)
chr8 (202-249)||(13742916-13742963)
chr8 (201-248)||(15246341-15246388)
[»] chr7 (1 HSPs)
chr7 (221-281)||(44836736-44836797)


Alignment Details
Target: chr1 (Bit Score: 259; Significance: 1e-144; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 7 - 421
Target Start/End: Complemental strand, 2558144 - 2557729
Alignment:
Q  7 agcagaacctgtgaagtgatatcaagtaaagatgcaaaagcataacaaatcaaatatgaatgtaatnnnnnnnnccaaatgcaaacaaaggaccgtcatt 106  Q
    |||| ||||| |||||||||||||||||||||| |||||||| |||||||||||||||||||||||          ||||||||||||||||||| ||||    
T  2558144 agcaaaacctatgaagtgatatcaagtaaagatacaaaagcagaacaaatcaaatatgaatgtaataaaaaaata-aaatgcaaacaaaggaccgccatt 2558046  T
Q  107 tatacccatgttttcaattccgaaagacattttccccttctttaaataaaaaga-tagtgtagaaacatcacatggcaaaaaat--ggagggatgaagtg 203  Q
     |||||||||||| |||| ||||||||||||||||| |||| |||||||||||| || |||||||||||||||||||||||||   ||||||||||||||    
T  2558045 gatacccatgtttacaatcccgaaagacattttccc-ttctataaataaaaagaataatgtagaaacatcacatggcaaaaaaataggagggatgaagtg 2557947  T
Q  204 caacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactgcagattctgatggatctagtgcattactacttcta 303  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2557946 caacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactgcagattctgatggatctagtgcattactacttcta 2557847  T
Q  304 tgatcattgaactaaactgagcttnnnnnnnnttatcttttctactctaagaagtaacaaatacaagatttcaaacaatcatgtcacgcatgtctagcac 403  Q
    ||||| |||||||||||||||  |         ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |    
T  2557846 tgatcgttgaactaaactgagacttaaaaaaactatcttttccactctaagaagtaacaaatacaagatttcaaacaatcatgtcaagcatgtctagccc 2557747  T
Q  404 ctgaactcaaatcctata 421  Q
    ||||||||||||||||||    
T  2557746 ctgaactcaaatcctata 2557729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 201 - 234
Target Start/End: Original strand, 12891612 - 12891645
Alignment:
Q  201 gtgcaacacaaggacttcccaggaggtcacccat 234  Q
    |||||||||||||||||||||| |||||||||||    
T  12891612 gtgcaacacaaggacttcccagaaggtcacccat 12891645  T

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Target: chr6 (Bit Score: 62; Significance: 1e-26; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 16477090 - 16477171
Alignment:
Q  201 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||| |||||||||    
T  16477090 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcgcccaagcacgcttgactgcagagttctgatgg 16477171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 201 - 281
Target Start/End: Complemental strand, 18860104 - 18860023
Alignment:
Q  201 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||| |||||||||    
T  18860104 gtgcaacacaaggactttccaggaggtcacccatcctagtactactctcgcccaagcacgcttaactgcagagttctgatgg 18860023  T

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Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 201 - 255
Target Start/End: Original strand, 1786902 - 1786956
Alignment:
Q  201 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaa 255  Q
    ||||||||||| ||||| |||| ||||||||||||||| ||||||||||| ||||    
T  1786902 gtgcaacacaaagacttaccagaaggtcacccatcctaatactactctcgtccaa 1786956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 201 - 281
Target Start/End: Complemental strand, 15052402 - 15052321
Alignment:
Q  201 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    |||||||||||| ||||| || ||| ||| |||| ||||||| | | ||| ||||||||| ||||||||||| |||||||||    
T  15052402 gtgcaacacaagaacttctcatgagatcatccattctagtaccattttcgtccaaacacgtttaactgcagagttctgatgg 15052321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 1e-26; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 201 - 281
Target Start/End: Complemental strand, 21825820 - 21825739
Alignment:
Q  201 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||| |||||||||    
T  21825820 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcgcccaagcacgcttgactgcagagttctgatgg 21825739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 25904735 - 25904816
Alignment:
Q  201 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    ||||||||||||||||| |||  |||||| ||||| || ||||||||||| ||||| |||||||||||| || |||||||||    
T  25904735 gtgcaacacaaggactttccaaaaggtcatccatcttaatactactctcgtccaaatacgcttaactgcggagttctgatgg 25904816  T

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Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 281
Target Start/End: Original strand, 3153513 - 3153569
Alignment:
Q  227 tcacccatccta-gtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    |||||||||||| |||||||||||| |||| ||||||||||||| || |||||||||    
T  3153513 tcacccatcctaagtactactctcgcccaagcacgcttaactgcggagttctgatgg 3153569  T

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Target: chr4 (Bit Score: 62; Significance: 1e-26; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 205 - 281
Target Start/End: Original strand, 12182065 - 12182142
Alignment:
Q  205 aacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| |||||||||    
T  12182065 aacacaaggacttcccaggaggtcacccatcctagtactactctcgcccaagcacgcttaactgcagagttctgatgg 12182142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 205 - 272
Target Start/End: Original strand, 12180491 - 12180558
Alignment:
Q  205 aacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactgcaga 272  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  12180491 aacacaaggacttcccaggaggtcacccatcctagtactactctcgcccaagcacgcttaactgcaga 12180558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 201 - 308
Target Start/End: Original strand, 12184628 - 12184737
Alignment:
Q  201 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactgcaga-ttctga-tggatctagtgcattactac 298  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||||||| |||| ||||||||||||| || |||||| ||||||  |||||||| |||    
T  12184628 gtgcaacacaaggactttccaggaggtcacccatcctggtactactctcgcccaagcacgcttaactgcggagttctgattggatccggtgcattagtac 12184727  T
Q  299 ttctatgatc 308  Q
    || |||||||    
T  12184728 ttgtatgatc 12184737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 183 - 281
Target Start/End: Original strand, 12177327 - 12177425
Alignment:
Q  183 aaaaaatggagggatgaagtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    ||||||||| |||| || |||||| |||||||||||||||| |||||||||||||||||||||||||| |||| ||||||||||||| || |||||||||    
T  12177327 aaaaaatggtggga-gaggtgcaatacaaggacttcccaggtggtcacccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgg 12177425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 12170071 - 12170152
Alignment:
Q  201 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||| || | |||||||||||||||| |||||||||    
T  12170071 gtgcaacacaaggacttcccaagaggtcacccatcatagtactactctcgccctagcacgcttaactgcagagttctgatgg 12170152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 183 - 260
Target Start/End: Original strand, 12189626 - 12189702
Alignment:
Q  183 aaaaaatggagggatgaagtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacg 260  Q
    ||||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  12189626 aaaaaatggtggga-gaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcgcccaagcacg 12189702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 183 - 255
Target Start/End: Original strand, 12178907 - 12178978
Alignment:
Q  183 aaaaaatggagggatgaagtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaa 255  Q
    ||||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  12178907 aaaaaatggtggga-gaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcgcccaa 12178978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 201 - 269
Target Start/End: Original strand, 12180825 - 12180893
Alignment:
Q  201 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactgc 269  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||  ||||||||||||    
T  12180825 gtgcaacacaaggactttccaggaggtcacccatcctagtactactctcgcccaagaacgcttaactgc 12180893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 183 - 255
Target Start/End: Original strand, 12184291 - 12184362
Alignment:
Q  183 aaaaaatggagggatgaagtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaa 255  Q
    ||||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  12184291 aaaaaatggtggga-gaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcgcccaa 12184362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 183 - 281
Target Start/End: Original strand, 12189282 - 12189380
Alignment:
Q  183 aaaaaatggagggatgaagtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    ||||||||| |||| || ||||||||||||||||||||||||||||| |||||||||||||||||||| |||| |||  |||||||| || |||||||||    
T  12189282 aaaaaatggtggga-gaggtgcaacacaaggacttcccaggaggtcatccatcctagtactactctcgcccaagcacaattaactgcggagttctgatgg 12189380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 205 - 281
Target Start/End: Original strand, 12174133 - 12174210
Alignment:
Q  205 aacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||| |||| ||||||||||||| || |||||||||    
T  12174133 aacacaaggactttccaggaggtcatccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgg 12174210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 205 - 281
Target Start/End: Original strand, 12178585 - 12178662
Alignment:
Q  205 aacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    |||||||||||||||||||||| |||||||| |||||||||||||| |||| ||||||||||||| || |||||||||    
T  12178585 aacacaaggacttcccaggaggacacccatcatagtactactctcgcccaagcacgcttaactgcggagttctgatgg 12178662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 205 - 281
Target Start/End: Original strand, 12183968 - 12184045
Alignment:
Q  205 aacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||| ||||||| || |||||||||    
T  12183968 aacacaaggacttccaaggaggtcacccatcctagtactactctcgtccaagcacgcgtaactgcggagttctgatgg 12184045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 183 - 255
Target Start/End: Original strand, 12182387 - 12182458
Alignment:
Q  183 aaaaaatggagggatgaagtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaa 255  Q
    ||||||||| |||| || |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  12182387 aaaaaatggtggga-gaggtgcaacacaaggacttcccaggaggtcacccatcctagtcctactctcgcccaa 12182458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 183 - 281
Target Start/End: Original strand, 12184953 - 12185051
Alignment:
Q  183 aaaaaatggagggatgaagtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    ||||||||| |||| || |||||||| |||||| |||||||||| ||||||||||||||||||||||| |||| ||||||||| ||| || |||||||||    
T  12184953 aaaaaatggtggga-gaggtgcaacaaaaggacctcccaggaggccacccatcctagtactactctcgcccaagcacgcttaattgctgagttctgatgg 12185051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 183 - 281
Target Start/End: Original strand, 12185297 - 12185395
Alignment:
Q  183 aaaaaatggagggatgaagtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    ||||||||| |||| || ||||||||||||||||||| |||||| |||||||||| |||||||||||| |||| ||||||||| ||| || |||||||||    
T  12185297 aaaaaatggtggga-gaggtgcaacacaaggacttcctaggaggacacccatccttgtactactctcgcccaagcacgcttaattgctgagttctgatgg 12185395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 183 - 281
Target Start/End: Original strand, 12186945 - 12187043
Alignment:
Q  183 aaaaaatggagggatgaagtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    ||||||||| |||| || |||||||| |||||| |||||||||| ||||||||||||||||||||||| |||| ||||||||| ||| || |||||||||    
T  12186945 aaaaaatggtggga-gaggtgcaacaaaaggacctcccaggaggccacccatcctagtactactctcgcccaagcacgcttaattgctgagttctgatgg 12187043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 183 - 281
Target Start/End: Original strand, 12187289 - 12187387
Alignment:
Q  183 aaaaaatggagggatgaagtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    ||||||||| |||| || ||||||||||||||||||| |||||| |||||||||| |||||||||||| |||| ||||||||| ||| || |||||||||    
T  12187289 aaaaaatggtggga-gaggtgcaacacaaggacttcctaggaggacacccatccttgtactactctcgcccaagcacgcttaattgctgagttctgatgg 12187387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 201 - 267
Target Start/End: Original strand, 12169482 - 12169548
Alignment:
Q  201 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaact 267  Q
    |||||||||||||||||||||  |||||||||||||||| |||||||||| |||| |||||||||||    
T  12169482 gtgcaacacaaggacttcccaaaaggtcacccatcctagaactactctcgcccaagcacgcttaact 12169548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 201 - 255
Target Start/End: Original strand, 12172454 - 12172508
Alignment:
Q  201 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaa 255  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  12172454 gtgcaatacaaggacttcccaggaggtcacccatcctagtactactctcgcccaa 12172508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 208 - 281
Target Start/End: Original strand, 12172786 - 12172860
Alignment:
Q  208 acaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    ||||||||| |||||||||||| |||||||||||||||||||| |||| ||||||||||||| || |||||||||    
T  12172786 acaaggactacccaggaggtcatccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgg 12172860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 207 - 269
Target Start/End: Original strand, 12173453 - 12173515
Alignment:
Q  207 cacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactgc 269  Q
    |||||||||| |||||||| ||| |||||||||||||||||||| ||||||||||||||||||    
T  12173453 cacaaggactacccaggagatcatccatcctagtactactctcgcccaaacacgcttaactgc 12173515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 204 - 281
Target Start/End: Original strand, 12174798 - 12174876
Alignment:
Q  204 caacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    ||||||||||||| |||||||| ||| |||||||||||||||||||| |||| ||||||||||||| || |||||||||    
T  12174798 caacacaaggactacccaggagatcatccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgg 12174876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 201 - 250
Target Start/End: Original strand, 12169167 - 12169216
Alignment:
Q  201 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcg 250  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  12169167 gtgcaatacaaggacttcccaggaggtcacccatcctagtactactctcg 12169216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 204 - 269
Target Start/End: Original strand, 12182731 - 12182796
Alignment:
Q  204 caacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactgc 269  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||| ||||  ||||||||||||    
T  12182731 caacacaaggacttcccaggaggtcatccatccaagtactactctcgcccaagaacgcttaactgc 12182796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 12188956 - 12189037
Alignment:
Q  201 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    |||||||||||| |||||||||||||||||||||||||| |||||||||| |||| |||  |||||||| || |||||||||    
T  12188956 gtgcaacacaagaacttcccaggaggtcacccatcctagaactactctcgcccaagcacaattaactgcggagttctgatgg 12189037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 204 - 268
Target Start/End: Original strand, 12169779 - 12169843
Alignment:
Q  204 caacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactg 268  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||| || | ||||||||||||    
T  12169779 caacacaatgacttcccaggaggtcacccatcatagtactactctcgccctagcacgcttaactg 12169843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 183 - 255
Target Start/End: Original strand, 12173103 - 12173174
Alignment:
Q  183 aaaaaatggagggatgaagtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaa 255  Q
    ||||||||| |||| || |||||| |||||||||||| |||||||||||||||||||||||||||||| ||||    
T  12173103 aaaaaatggtggga-gatgtgcaatacaaggacttcctaggaggtcacccatcctagtactactctcgcccaa 12173174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 183 - 282
Target Start/End: Original strand, 12186602 - 12186701
Alignment:
Q  183 aaaaaatggagggatgaagtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    ||||||||| |||| || |||||||||||||||||| ||||||| |||||||||| |||||||||||| |||| |||| |||| ||| || |||||||||    
T  12186602 aaaaaatggtggga-gaggtgcaacacaaggacttctcaggaggacacccatcctcgtactactctcgcccaagcacggttaattgctgagttctgatgg 12186700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 183 - 282
Target Start/End: Original strand, 12188596 - 12188695
Alignment:
Q  183 aaaaaatggagggatgaagtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    ||||||||| |||| || |||||||||||||||||| ||||||| |||||||||| |||||||||||| |||| |||| |||| ||| || |||||||||    
T  12188596 aaaaaatggtggga-gaggtgcaacacaaggacttctcaggaggacacccatcctcgtactactctcgcccaagcacggttaattgctgagttctgatgg 12188694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 205 - 268
Target Start/End: Original strand, 12173792 - 12173855
Alignment:
Q  205 aacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactg 268  Q
    ||||||||||||| ||||||||||| ||||||||||||||||| || |||| ||||||||||||    
T  12173792 aacacaaggactttccaggaggtcatccatcctagtactactcccgcccaagcacgcttaactg 12173855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 203 - 268
Target Start/End: Original strand, 12170661 - 12170726
Alignment:
Q  203 gcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactg 268  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||| || | ||| ||||||||    
T  12170661 gcaacacaatgacttcccaggaggtcacccatcatagtactactctcgccctagcacacttaactg 12170726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 205 - 281
Target Start/End: Original strand, 12175142 - 12175218
Alignment:
Q  205 aacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    ||||||||||||||||||||| ||| ||||||||||||||||| || |||| ||||||||||||| || |||||||||    
T  12175142 aacacaaggacttcccaggag-tcatccatcctagtactactcccgcccaagcacgcttaactgcggagttctgatgg 12175218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 204 - 269
Target Start/End: Original strand, 12179251 - 12179316
Alignment:
Q  204 caacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactgc 269  Q
    |||||||||||||||||||||||||| |||||  ||||||||||||| ||||  ||||||||||||    
T  12179251 caacacaaggacttcccaggaggtcatccatcaaagtactactctcgcccaagaacgcttaactgc 12179316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 183 - 255
Target Start/End: Original strand, 12174453 - 12174524
Alignment:
Q  183 aaaaaatggagggatgaagtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaa 255  Q
    ||||||||| |||| || |||||| |||||||||||| |||| ||||||||||||||||||||||||| ||||    
T  12174453 aaaaaatggtggga-gatgtgcaatacaaggacttcctaggacgtcacccatcctagtactactctcgcccaa 12174524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 203 - 281
Target Start/End: Original strand, 12170367 - 12170446
Alignment:
Q  203 gcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    ||||||||| ||||||| ||||||||||||||| |||||||||||||| || | ||| ||||||||| || |||||||||    
T  12170367 gcaacacaatgacttcctaggaggtcacccatcatagtactactctcgccctagcacccttaactgcggagttctgatgg 12170446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 196 - 280
Target Start/End: Original strand, 4374977 - 4375062
Alignment:
Q  196 atgaagtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgatg 280  Q
    |||| |||||||||||||| |||| |||| ||||| ||||||| |||||||||||  ||| || ||||||||||||| ||||||||    
T  4374977 atgaggtgcaacacaaggatttcctaggaagtcacacatcctattactactctcgcacaagcatgcttaactgcagagttctgatg 4375062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 183 - 265
Target Start/End: Original strand, 12176984 - 12177067
Alignment:
Q  183 aaaaaatggagggatgaagtgcaacacaaggacttcccag--gaggtcacccatcctagtactactctcggccaaacacgcttaa 265  Q
    ||||||||| |||| || |||||||| |||||||||||    |||||||||||||||||||||||||||| |||| |||||||||    
T  12176984 aaaaaatggtggga-gaggtgcaacaaaaggacttccccctagaggtcacccatcctagtactactctcgtccaagcacgcttaa 12177067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 223 - 294
Target Start/End: Original strand, 12186297 - 12186370
Alignment:
Q  223 gaggtcacccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgat-ggatctagtgcatta 294  Q
    |||| ||||||||||||||||||||||| |||| ||||||||| ||| || ||||||| |||||| ||||||||    
T  12186297 gaggacacccatcctagtactactctcgcccaagcacgcttaattgctgagttctgatgggatctggtgcatta 12186370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 223 - 294
Target Start/End: Original strand, 12188291 - 12188364
Alignment:
Q  223 gaggtcacccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgat-ggatctagtgcatta 294  Q
    |||| ||||||||||||||||||||||| |||| ||||||||| ||| || ||||||| |||||| ||||||||    
T  12188291 gaggacacccatcctagtactactctcgcccaagcacgcttaattgctgagttctgatgggatctggtgcatta 12188364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 12170986 - 12171052
Alignment:
Q  183 aaaaaatggagggatgaagtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcg 250  Q
    |||||||||||||| || |||||||  |||||||||| |||||||||||| |||||||| || |||||    
T  12170986 aaaaaatggaggga-gaggtgcaactaaaggacttcctaggaggtcacccgtcctagtattattctcg 12171052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 1e-26; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 24621697 - 24621778
Alignment:
Q  201 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| || |||||||||    
T  24621697 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgg 24621778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 24622016 - 24622097
Alignment:
Q  201 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| || |||||||||    
T  24622016 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgg 24622097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 24622335 - 24622416
Alignment:
Q  201 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| || |||||||||    
T  24622335 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgg 24622416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 24622619 - 24622700
Alignment:
Q  201 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| || |||||||||    
T  24622619 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgg 24622700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 24622903 - 24622984
Alignment:
Q  201 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| || |||||||||    
T  24622903 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgg 24622984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 24623506 - 24623587
Alignment:
Q  201 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| || |||||||||    
T  24623506 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgg 24623587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 24623825 - 24623906
Alignment:
Q  201 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| || |||||||||    
T  24623825 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgg 24623906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 24624418 - 24624499
Alignment:
Q  201 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| || |||||||||    
T  24624418 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgg 24624499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 24624737 - 24624818
Alignment:
Q  201 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| || |||||||||    
T  24624737 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgg 24624818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 24625021 - 24625102
Alignment:
Q  201 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| || |||||||||    
T  24625021 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgg 24625102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 24625340 - 24625421
Alignment:
Q  201 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| || |||||||||    
T  24625340 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgg 24625421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 24626913 - 24626994
Alignment:
Q  201 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| || |||||||||    
T  24626913 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgg 24626994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 24631399 - 24631480
Alignment:
Q  201 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| || |||||||||    
T  24631399 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgg 24631480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 24631718 - 24631799
Alignment:
Q  201 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| || |||||||||    
T  24631718 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgg 24631799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 24632002 - 24632083
Alignment:
Q  201 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| || |||||||||    
T  24632002 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgg 24632083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 24632286 - 24632367
Alignment:
Q  201 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| || |||||||||    
T  24632286 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgg 24632367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 24632605 - 24632686
Alignment:
Q  201 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| || |||||||||    
T  24632605 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgg 24632686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 24632889 - 24632970
Alignment:
Q  201 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| || |||||||||    
T  24632889 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgg 24632970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 24633173 - 24633254
Alignment:
Q  201 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| || |||||||||    
T  24633173 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgg 24633254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 24633492 - 24633573
Alignment:
Q  201 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| || |||||||||    
T  24633492 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgg 24633573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 24633811 - 24633892
Alignment:
Q  201 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| || |||||||||    
T  24633811 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgg 24633892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 24634095 - 24634176
Alignment:
Q  201 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| || |||||||||    
T  24634095 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgg 24634176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 24634698 - 24634779
Alignment:
Q  201 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| || |||||||||    
T  24634698 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgg 24634779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 24638777 - 24638858
Alignment:
Q  201 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| || |||||||||    
T  24638777 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgg 24638858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 24639096 - 24639177
Alignment:
Q  201 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| || |||||||||    
T  24639096 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgg 24639177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 24623222 - 24623303
Alignment:
Q  201 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||| || |||||||||    
T  24623222 gtgcaacacaaggacttcccaggaggtcacccatcctagnactactctcgcccaagcacgcttaactgcggagttctgatgg 24623303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 24627232 - 24627313
Alignment:
Q  201 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||| || |||||||||    
T  24627232 gtgcaacacaaggacttcccaggaggtcacccatcctagnactactctcgcccaagcacgcttaactgcggagttctgatgg 24627313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 24627516 - 24627597
Alignment:
Q  201 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| || |||||||||    
T  24627516 gtgcaacacaangacttcccaggaggtcacccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgg 24627597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 24631115 - 24631196
Alignment:
Q  201 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||||||||| || |||||||||    
T  24631115 gtgcaacacaaggacttcccangaggtcacccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgg 24631196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 3348064 - 3348145
Alignment:
Q  201 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||| || |||||||||    
T  3348064 gtgcaacacaaggacttcctaggaggtcacccatcctagtactactctcgtccaagcacgcttaactgcggagttctgatgg 3348145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 24625982 - 24626063
Alignment:
Q  201 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| || |||||||||    
T  24625982 gtgcaaaacaaggacttcccaggaggtcacccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgg 24626063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 24634414 - 24634495
Alignment:
Q  201 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||| || |||||||||    
T  24634414 gtgcaacacaaggacttcccaggaggtcacccatcctagcactactctcgcccaagcacgcttaactgcggagttctgatgg 24634495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 24638458 - 24638539
Alignment:
Q  201 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||| || |||||||||    
T  24638458 gtgcaacacaaggacttcccaggaggtcacccatcctagcactactctcgcccaagcacgcttaactgcggagttctgatgg 24638539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 24626302 - 24626354
Alignment:
Q  201 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggcc 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24626302 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggcc 24626354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 24620764 - 24620848
Alignment:
Q  201 gtgcaacacaaggacttcccaggaggtcacccatc---ctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    |||||||||||||||||||||||||||||||||||   ||||||||||||||| |||| ||||||||||||| || |||||||||    
T  24620764 gtgcaacacaaggacttcccaggaggtcacccatccanctagtactactctcgcccaagcacgcttaactgcggagttctgatgg 24620848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 201 - 269
Target Start/End: Original strand, 24619616 - 24619687
Alignment:
Q  201 gtgcaacacaaggacttcccaggaggtcacccatc---ctagtactactctcggccaaacacgcttaactgc 269  Q
    |||||||||||||||||||||||||||||||||||   ||||||||||||||| |||| |||||||||||||    
T  24619616 gtgcaacacaaggacttcccaggaggtcacccatccanctagtactactctcgcccaagcacgcttaactgc 24619687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 24621086 - 24621171
Alignment:
Q  201 gtgcaacacaaggacttcccaggaggtcac----ccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    ||||||||||||||||||||||||||||||    |||||||||||||||||||| |||| ||||||||||||| || |||||||||    
T  24621086 gtgcaacacaaggacttcccaggaggtcacccatccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgg 24621171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 24621409 - 24621494
Alignment:
Q  201 gtgcaacacaaggacttcccaggaggtcacccat----cctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    ||||||||||||||||||||||||||||||||||    |||||||||||||||| |||| ||||||||||||| || |||||||||    
T  24621409 gtgcaacacaaggacttcccaggaggtcacccatccnncctagtactactctcgcccaagcacgcttaactgcggagttctgatgg 24621494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 24625659 - 24625744
Alignment:
Q  201 gtgcaacacaaggacttcccaggaggtcacccat----cctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    ||||||||||||||||||||||||||||||||||    |||||||||||||||| |||| ||||||||||||| || |||||||||    
T  24625659 gtgcaacacaaggacttcccaggaggtcacccatccancctagtactactctcgcccaagcacgcttaactgcggagttctgatgg 24625744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 24626625 - 24626710
Alignment:
Q  201 gtgcaacacaaggacttcccaggaggtcacccat----cctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    ||||||||||||||||||||||||||||||||||    |||||||||||||||| |||| ||||||||||||| || |||||||||    
T  24626625 gtgcaacacaaggacttcccaggaggtcacccatcctacctagtactactctcgcccaagcacgcttaactgcggagttctgatgg 24626710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 24635569 - 24635654
Alignment:
Q  201 gtgcaacacaaggacttcccaggaggtcac----ccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    ||||||||||||||||||||||||||||||    |||||||||||||||||||| |||| ||||||||||||| || |||||||||    
T  24635569 gtgcaacacaaggacttcccaggaggtcacccatccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgg 24635654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 24636270 - 24636355
Alignment:
Q  201 gtgcaacacaaggacttcccaggaggtcac----ccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    ||||||||||||||||||||||||||||||    |||||||||||||||||||| |||| ||||||||||||| || |||||||||    
T  24636270 gtgcaacacaaggacttcccaggaggtcacccatccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgg 24636355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 24636593 - 24636678
Alignment:
Q  201 gtgcaacacaaggacttcccaggaggtcac----ccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    ||||||||||||||||||||||||||||||    |||||||||||||||||||| |||| ||||||||||||| || |||||||||    
T  24636593 gtgcaacacaaggacttcccaggaggtcacccatccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgg 24636678  T

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Target: chr2; HSP #44
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 24637518 - 24637603
Alignment:
Q  201 gtgcaacacaaggacttcccaggaggtcacccat----cctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    ||||||||||||||||||||||||||||||||||    |||||||||||||||| |||| ||||||||||||| || |||||||||    
T  24637518 gtgcaacacaaggacttcccaggaggtcacccatcctacctagtactactctcgcccaagcacgcttaactgcggagttctgatgg 24637603  T

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Target: chr2; HSP #45
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 24637841 - 24637893
Alignment:
Q  201 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggcc 253  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  24637841 gtgcaaaacaaggacttcccaggaggtcacccatcctagtactactctcggcc 24637893  T

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Target: chr2; HSP #46
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 24639445 - 24639530
Alignment:
Q  201 gtgcaacacaaggacttcccaggaggtcac----ccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    ||||||||||||||||||||||||||||||    |||||||||||||||||||| |||| ||||||||||||| || |||||||||    
T  24639445 gtgcaacacaaggacttcccaggaggtcacccatccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgg 24639530  T

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Target: chr2; HSP #47
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 24639768 - 24639853
Alignment:
Q  201 gtgcaacacaaggacttcccaggaggtcacccat----cctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    ||||||||||||||||||||||||||||||||||    |||||||||||||||| |||| ||||||||||||| || |||||||||    
T  24639768 gtgcaacacaaggacttcccaggaggtcacccatccnncctagtactactctcgcccaagcacgcttaactgcggagttctgatgg 24639853  T

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Target: chr2; HSP #48
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 24640091 - 24640176
Alignment:
Q  201 gtgcaacacaaggacttcccaggaggtcac----ccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    ||||||||||||||||||||||||||||||    |||||||||||||||||||| |||| ||||||||||||| || |||||||||    
T  24640091 gtgcaacacaaggacttcccaggaggtcacccatccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgg 24640176  T

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Target: chr2; HSP #49
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 24635246 - 24635331
Alignment:
Q  201 gtgcaacacaaggacttcccaggaggtcac----ccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    |||||||||||||||||||| |||||||||    |||||||||||||||||||| |||| ||||||||||||| || |||||||||    
T  24635246 gtgcaacacaaggacttcccnggaggtcacccatccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgg 24635331  T

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Target: chr2; HSP #50
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 24636916 - 24637001
Alignment:
Q  201 gtgcaacacaaggacttcccaggaggtcac----ccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    |||||||||||||||||||| |||||||||    |||||||||||||||||||| |||| ||||||||||||| || |||||||||    
T  24636916 gtgcaacacaaggacttccctggaggtcacccatccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgg 24637001  T

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Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 227 - 281
Target Start/End: Original strand, 24630857 - 24630912
Alignment:
Q  227 tcacccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    |||||||||||||||||||||||| |||| ||||||||||||| || |||||||||    
T  24630857 tcacccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgg 24630912  T

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Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 221 - 271
Target Start/End: Original strand, 38802330 - 38802380
Alignment:
Q  221 aggaggtcacccatcctagtactactctcggccaaacacgcttaactgcag 271  Q
    ||||||||| |||| ||| ||||||||| | ||||||||||||||||||||    
T  38802330 aggaggtcatccatactattactactcttgtccaaacacgcttaactgcag 38802380  T

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Target: scaffold1024 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold1024
Description:

Target: scaffold1024; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 201 - 281
Target Start/End: Complemental strand, 108 - 27
Alignment:
Q  201 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| || |||||||||    
T  108 gtgcaacacacggacttcccaggaggtcacccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgg 27  T

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Target: chr3 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 201 - 255
Target Start/End: Complemental strand, 14903213 - 14903159
Alignment:
Q  201 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaa 255  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||| ||||    
T  14903213 gtgcaacacaaggacttttcaggaggtcacccatcctagtactactctcgcccaa 14903159  T

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Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 205 - 281
Target Start/End: Complemental strand, 16990144 - 16990067
Alignment:
Q  205 aacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 281  Q
    |||||||||||||||||  ||||||| ||||||||||||||||||| |||| |||| |||||||| || |||||||||    
T  16990144 aacacaaggacttcccaataggtcactcatcctagtactactctcgcccaagcacgtttaactgcggagttctgatgg 16990067  T

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Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 201 - 269
Target Start/End: Complemental strand, 3732761 - 3732693
Alignment:
Q  201 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactgc 269  Q
    |||||||||||||||||   | ||||||||||||  |||||||||| ||| ||||  ||||||||||||    
T  3732761 gtgcaacacaaggacttttgaagaggtcacccattttagtactactttcgcccaagtacgcttaactgc 3732693  T

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Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 200 - 268
Target Start/End: Original strand, 30729417 - 30729485
Alignment:
Q  200 agtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactg 268  Q
    |||||||||||| |||||  ||| ||||||||||||||| | |||||||||  ||| |||| |||||||    
T  30729417 agtgcaacacaatgacttttcagaaggtcacccatcctaatgctactctcgttcaagcacgtttaactg 30729485  T

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Target: chr8 (Bit Score: 36; Significance: 0.00000000004; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 202 - 249
Target Start/End: Complemental strand, 13642551 - 13642504
Alignment:
Q  202 tgcaacacaaggacttcccaggaggtcacccatcctagtactactctc 249  Q
    ||||||||||||| |||||| ||||||||||||| |||||||||||||    
T  13642551 tgcaacacaaggatttcccatgaggtcacccatcttagtactactctc 13642504  T

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Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 202 - 249
Target Start/End: Complemental strand, 13742963 - 13742916
Alignment:
Q  202 tgcaacacaaggacttcccaggaggtcacccatcctagtactactctc 249  Q
    |||||||| ||||||||||| ||||||||||||| |||||||||||||    
T  13742963 tgcaacacgaggacttcccatgaggtcacccatcttagtactactctc 13742916  T

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Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 201 - 248
Target Start/End: Original strand, 15246341 - 15246388
Alignment:
Q  201 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactct 248  Q
    |||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  15246341 gtgcaacacaaggacttttcaggaggtcacctatcctagtactgctct 15246388  T

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Target: chr7 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 281
Target Start/End: Complemental strand, 44836797 - 44836736
Alignment:
Q  221 aggaggtcacccatcctagtactactctcggccaaacacgcttaactgc-agattctgatgg 281  Q
    |||||||||||||||||| ||| ||||||| ||||||| | |||||||| | ||||||||||    
T  44836797 aggaggtcacccatcctaatacaactctcgcccaaacatgtttaactgcgaaattctgatgg 44836736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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