View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4137_high_10 (Length: 250)
Name: NF4137_high_10
Description: NF4137
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4137_high_10 |
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Alignment Details
Target: chr7 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 33433693 - 33433478
Alignment:
| Q |
1 |
caaaagcctctgtgactatgagtcgtcccccgagcgatgtgttgaatggctttgtgacaccatattttctcgtttcattcgatccaaacacctgccttca |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33433693 |
caaaagcctctgtgactatgagtcgtcccccgagcgatgtgttgaatggctttgtgacaccatattttctcgtttcattcgatccaaacacctgccttca |
33433594 |
T |
|
| Q |
101 |
gcaactattaaacttcaactcaaatttcaacttatttctttccttagtaatgttcctcctgaggataacagcattctagaggtgcgtgcccttattttta |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
33433593 |
gcaactattaaacttcaactcaaatttcaacttatttctttccttagtaatgttcctcctgaggataacagcattctagaggtgtgtgcccttattttta |
33433494 |
T |
|
| Q |
201 |
ttgattcaataatcat |
216 |
Q |
| |
|
|||||||||||||||| |
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| T |
33433493 |
ttgattcaataatcat |
33433478 |
T |
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