View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4137_low_17 (Length: 204)
Name: NF4137_low_17
Description: NF4137
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4137_low_17 |
 | |
|
Alignment Details
Target: chr3 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 2 - 188
Target Start/End: Complemental strand, 24065229 - 24065043
Alignment:
| Q |
2 |
taacattaaaatcaattccataagacttaagaatttttgcagccaacccatttgaatcaccaaggataccaagtagtatatgttctgtgctaatgtattt |
101 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24065229 |
taacattaaaatcaattccataagacttaagaatttttgcagccaacccatttgaatcaccaaggataccaagtagtatatgttctgtgctaatgtattt |
24065130 |
T |
|
| Q |
102 |
atgtcccacaaacctagcttccttttgtgcagccattattactttctttgcacattctgttaaattctccaacatttttgttacact |
188 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24065129 |
atgtcccacaaacctagcttccttttgtgcagccattattactttctttgcacattctgttaaattctccaacatttttgttacact |
24065043 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University