View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4137_low_6 (Length: 351)
Name: NF4137_low_6
Description: NF4137
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4137_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 288; Significance: 1e-161; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 19 - 339
Target Start/End: Complemental strand, 24047058 - 24046738
Alignment:
| Q |
19 |
tgtaaatcccaaaaatagaaccagttgaaactgcagcatcaatattcgatgaaccatcaagtggatcaaagaccacaatgtagtttcctgaataactctc |
118 |
Q |
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| T |
24047058 |
tgtaaatcccaaaaatagaaccagttgaaactgcagcatcaatattcgatgaaccatcaagtggatcaaagaccacaatgtagtttcctgaataactctc |
24046959 |
T |
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| Q |
119 |
ttctactgccactggcacatcctcttcctctgatgctataatccctgtcctcccacttgacctcaaacaatttgagaatacctgaacnnnnnnntagaaa |
218 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
24046958 |
ttctactgccactggcacatcctcttcctctgatgctataatccctgtcctcccacttgacctcaaacaatttgagaatacctgaacaaaaaaatagaaa |
24046859 |
T |
|
| Q |
219 |
acaatacattgtctattaacattagtagttacctaagtaaaactttaagtttaagtacatacatagttggtcataaatgtgaccaagagtaaacccttct |
318 |
Q |
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|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |
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| T |
24046858 |
acaatacattgtctattaacattagtagctacctaagtaaaactttaagtttaagtacatacatacttgatcataaatgtgaccaagagtaaacccttct |
24046759 |
T |
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| Q |
319 |
aatacactcctttagcatatt |
339 |
Q |
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||||||||||||||||||||| |
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| T |
24046758 |
aatacactcctttagcatatt |
24046738 |
T |
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