View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4137_low_7 (Length: 338)
Name: NF4137_low_7
Description: NF4137
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4137_low_7 |
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Alignment Details
Target: chr2 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 10 - 323
Target Start/End: Original strand, 8800148 - 8800463
Alignment:
| Q |
10 |
attatactcactctctttgttttcttcttgctcgagattaaaaattaactcattttagcatacaagaaactataagatata--gtttgtttcttttgaac |
107 |
Q |
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| T |
8800148 |
attatactcactctctttgttttcttcttgctcgagattaaaaattaactcattttagtatacaagaaactataagatatatagtttgtttcttttgaac |
8800247 |
T |
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| Q |
108 |
aatagtaattaatgattaaatcacatttt-gtcttgaaaatgtaattgttaattttgaacacgaaatttatgaaacataaaattatccccctaaattgtc |
206 |
Q |
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| T |
8800248 |
aatagtaattaatgattaaatcacatttttgtcttgaaaatgtaattgtta-ttttgaacactaaatttatgaaacataaaattattcccctaaattgtc |
8800346 |
T |
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| Q |
207 |
ttacgtcaatcaaaatgtttcttcgttaattagttttattagatgtgttgatgtgttattttaagtgatagcgtgatttgtttaagtcgatgtcacgcca |
306 |
Q |
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| T |
8800347 |
ttacgtcaatcaaaatgtttctttgttaattaattttattagatgtgttgatgtgttaatttaagtgatatcgtgatttgtttaaatcgatgtcacccca |
8800446 |
T |
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| Q |
307 |
cacataatatcataact |
323 |
Q |
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| T |
8800447 |
cacataatatcataact |
8800463 |
T |
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