View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4139_high_18 (Length: 312)
Name: NF4139_high_18
Description: NF4139
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4139_high_18 |
 |  |
|
Alignment Details
Target: chr4 (Bit Score: 210; Significance: 1e-115; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 11 - 300
Target Start/End: Original strand, 12888501 - 12888789
Alignment:
| Q |
11 |
cttgagctcaccaccacacaagaaagagacagtaaacttcgcctcccaactcaacaccaacaaccgtcacttgtgatatccatcaccaacaaccaccaaa |
110 |
Q |
| |
|
||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||| |
|
|
| T |
12888501 |
cttgaactcaccac-acacaagaaagagacagtaaacttcgcctcccaactcaacaccaacaaccaccacctgtgatacccatcaccaacaaccaccaaa |
12888599 |
T |
 |
| Q |
111 |
atcaccatcaactcaataaaccatgaccttagatctgagatcaccacatgcaaactgcatcaccaccacttggacatcccccaagacagcaacattactc |
210 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||| || |||||||||||| |||| |
|
|
| T |
12888600 |
attaccatcaactcaataaaccatgaccttagatttgagatcaccacacgcagactgcatcaccaccacttggacatcacctaagacagcaacaccactc |
12888699 |
T |
 |
| Q |
211 |
cctgcatcacctccattcgaaacttcaccaaaaacagcagcacactaacaacacccccactccaacatcaccaaccgaaacatctccctt |
300 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||| |||||||| | ||||| |||||||||||||||||||||||||||| |
|
|
| T |
12888700 |
cctgcatcacctccatttgaaacttcaccaaaaacagcagcacattaacaacaacaccactacaacatcaccaaccgaaacatctccctt |
12888789 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 135
Target Start/End: Complemental strand, 46879551 - 46879468
Alignment:
| Q |
53 |
ctcccaactcaacaccaacaaccgtca-cttgtgatatccatcaccaacaaccaccaaaatcaccatcaactcaataaaccatg |
135 |
Q |
| |
|
||||||||||||||||||||||| || |||| |||| ||||||| ||||| ||| ||||||||||| ||||||||||| |||| |
|
|
| T |
46879551 |
ctcccaactcaacaccaacaaccaccatcttgagatacccatcacaaacaatcactaaaatcaccattaactcaataaaacatg |
46879468 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 180; Significance: 3e-97; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 27 - 300
Target Start/End: Original strand, 36593173 - 36593443
Alignment:
| Q |
27 |
cacaagaaagagacagtaaacttcgcctcccaactcaacaccaacaaccgtcacttgtgatatccatcaccaacaaccaccaaaatcaccatcaactcaa |
126 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||| ||||||||||||||| ||||||||||||| |
|
|
| T |
36593173 |
cacaagaaagagacagtaaacttcgcctcccaactcaacaccaaccacc---acttgtgatacccatcacaaacaaccaccaaaataaccatcaactcaa |
36593269 |
T |
 |
| Q |
127 |
taaaccatgaccttagatctgagatcaccacatgcaaactgcatcaccaccacttggacatcccccaagacagcaacattactccctgcatcacctccat |
226 |
Q |
| |
|
||| |||||||||||||||||||||||||| | || ||| ||||||||||||||||||||| |||| ||||||||| |||||||||||||||||||| |
|
|
| T |
36593270 |
taatccatgaccttagatctgagatcaccaaacacagactacatcaccaccacttggacatcatccaaaacagcaacaccactccctgcatcacctccat |
36593369 |
T |
 |
| Q |
227 |
tcgaaacttcaccaaaaacagcagcacactaacaacacccccactccaacatcaccaaccgaaacatctccctt |
300 |
Q |
| |
|
|||||||||||| |||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||||| |
|
|
| T |
36593370 |
tcgaaacttcacaaaaaacagtagcacactaacaacactaccactctaacatcaccaaccgaaacatctccctt |
36593443 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 165; Significance: 3e-88; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 17 - 295
Target Start/End: Original strand, 20519263 - 20519538
Alignment:
| Q |
17 |
ctcaccaccacacaagaaagagacagtaaacttcgcctcccaactcaacaccaacaaccgtcacttgtgatatccatcaccaacaaccaccaaaatcacc |
116 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||| ||||| |||||||||||||||||||||||| || |
|
|
| T |
20519263 |
ctcaccaccacacaagaaagagacaataaacttcgcctcccaactcaacaccaaccacc---acttatgatacccatcaccaacaaccaccaaaatctcc |
20519359 |
T |
 |
| Q |
117 |
atcaactcaataaaccatgaccttagatctgagatcaccacatgcaaactgcatcaccaccacttggacatcccccaagacagcaacattactccctgca |
216 |
Q |
| |
|
|||||| |||| |||||||| ||||||||||||||||| | | ||| ||| |||||||||||||||||||| || || ||||||||| |||||||| || |
|
|
| T |
20519360 |
atcaacacaatcaaccatgatcttagatctgagatcacaaaacgcagactcaatcaccaccacttggacatcacctaaaacagcaacactactccctaca |
20519459 |
T |
 |
| Q |
217 |
tcacctccattcgaaacttcaccaaaaacagcagcacactaacaacacccccactccaacatcaccaaccgaaacatct |
295 |
Q |
| |
|
|||||||||||| |||||||||||||||||| ||||||||||||||| |||||| |||||||||||||||||||||| |
|
|
| T |
20519460 |
tcacctccattcaaaacttcaccaaaaacagttgcacactaacaacactaccactctaacatcaccaaccgaaacatct |
20519538 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 17 - 300
Target Start/End: Complemental strand, 38149323 - 38149043
Alignment:
| Q |
17 |
ctcaccaccacacaagaaagagacagtaaacttcgcctcccaactcaacaccaacaaccgtcacttgtgatatccatcaccaacaaccaccaaaatcacc |
116 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||| ||| |
|
|
| T |
38149323 |
ctcaccaccacacaagaaagagacaataaacttcgcctcccaactcaacaccaaccacc---acttgtgatactcatcaccaacaaccaccaaaataacc |
38149227 |
T |
 |
| Q |
117 |
atcaactcaataaaccatgaccttagatctgagatcaccacatgcaaactgcatcaccaccacttggacatcccccaagacagcaacattactccctgca |
216 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| | || ||||||||||||||||| ||||| |||| |||| | || |||||||||| |
|
|
| T |
38149226 |
atcaactcaataaaccatgaccttagatctgagatcaccaaacacagactgcatcaccaccactgtcacatcatccaaaacagaagcaccactccctgca |
38149127 |
T |
 |
| Q |
217 |
tcacctccattcgaaacttcaccaaaaacagcagcacactaacaacacccccactccaacatcaccaaccgaaacatctccctt |
300 |
Q |
| |
|
|||||||||||| ||||||||| |||||||| |||||||||| ||||| ||| || ||||||||||||||||||||||||||| |
|
|
| T |
38149126 |
tcacctccattcaaaacttcacaaaaaacagtagcacactaataacactaccattctaacatcaccaaccgaaacatctccctt |
38149043 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 3 - 300
Target Start/End: Complemental strand, 32919331 - 32919039
Alignment:
| Q |
3 |
gccacacccttgagctcaccaccacacaagaaagagacagtaaacttcgcctcccaactcaacaccaacaaccgtcacttgtgatatccatcaccaacaa |
102 |
Q |
| |
|
||||||||| || ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||| |
|
|
| T |
32919331 |
gccacacccacgaactcaccaccacacaagaaagagatagtgaacttcgcctcccaactcaacaccaaccacc---acttgtgatacccatcaccaacaa |
32919235 |
T |
 |
| Q |
103 |
ccaccaaaatcaccatcaactcaataaaccatgaccttagatctgagatcaccacatgcaaactgcatcaccaccacttggacatcccccaagacagcaa |
202 |
Q |
| |
|
|||||||| | ||||||||||||||||| |||||||||||| ||||||||||| | || ||||||||||||||||||| ||||| |||| |||||| |
|
|
| T |
32919234 |
ccaccaaa-taaccatcaactcaataaattatgaccttagatatgagatcaccaaacacagactgcatcaccaccacttgaacatcatccaaaacagcag |
32919136 |
T |
 |
| Q |
203 |
cattactccctgcatcacctccattcgaaacttcaccaaaaacagcagcacactaacaacacccccactccaacatcaccaaccgaaacatctccctt |
300 |
Q |
| |
|
|| ||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||||| |
|
|
| T |
32919135 |
cac-actccttgcatcacctccattcgaaacttcacaaaaaacagtagcacactaacaacactgccactctaacatcaccaaccgaaacatctccctt |
32919039 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 165; Significance: 3e-88; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 1 - 300
Target Start/End: Original strand, 49358802 - 49359100
Alignment:
| Q |
1 |
tcgccacacccttgagctcaccaccacacaagaaagagacagtaaac--ttcgcctcccaactcaacaccaacaaccgtcacttgtgatatccatcacca |
98 |
Q |
| |
|
||||||||||| ||| |||||| |||||||||||||||||||| ||| ||||||| ||| ||||||||||| |||| ||||||||||| ||||||||| |
|
|
| T |
49358802 |
tcgccacacccctgaactcaccgccacacaagaaagagacagtgaacatttcgccttccacctcaacaccaaaaaccaccacttgtgatacccatcacca |
49358901 |
T |
 |
| Q |
99 |
acaaccaccaaaatcaccatcaactcaataaaccatgaccttagatctgagatcaccacatgcaaactgcatcaccaccacttggacatcccccaagaca |
198 |
Q |
| |
|
|||||||||||||||||||| |||| |||||||||| ||||||||||||| ||||||||| ||||||||||| ||||||||||||||| ||||||||| |
|
|
| T |
49358902 |
acaaccaccaaaatcaccatgaacttaataaaccataaccttagatctgatatcaccacacgcaaactgcat---caccacttggacatcacccaagaca |
49358998 |
T |
 |
| Q |
199 |
gcaacattactccctgcatcacctccattcgaaacttcaccaaaaacagcagcacactaacaacacccccactccaacatcaccaaccgaaacatctccc |
298 |
Q |
| |
|
| || | | ||||| |||||||| ||||||||||||||||||||||| || ||||||||||||||| |||||||||||||||||| |||||||||||| |
|
|
| T |
49358999 |
ggaagaccattccctacatcaccttcattcgaaacttcaccaaaaacaacatcacactaacaacaccaacactccaacatcaccaacagaaacatctccc |
49359098 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 153; Significance: 4e-81; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 17 - 300
Target Start/End: Original strand, 22696806 - 22697086
Alignment:
| Q |
17 |
ctcaccaccacacaagaaagagacagtaaac--ttcgcctcccaactcaacaccaacaaccgtcacttgtgatatccatcaccaacaaccaccaaaatca |
114 |
Q |
| |
|
||||||||||||||||||||||||||| ||| ||||||||||| || ||||||||||||| ||||||||||| | |||||||||||||| ||| |
|
|
| T |
22696806 |
ctcaccaccacacaagaaagagacagtgaacatttcgcctcccagctaaacaccaacaaccaccacttgtgataccgatcaccaacaacca------tca |
22696899 |
T |
 |
| Q |
115 |
ccatcaactcaataaaccatgaccttagatctgagatcaccacatgcaaactgcatcaccaccacttggacatcccccaagacagcaacattactccctg |
214 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||| | | ||||||||||| ||||||||||||| ||||||||||||||| | |||||| |
|
|
| T |
22696900 |
ccatcaactcaataatccatgaccttagatctgagatcaccacacgtagactgcatcaccgccacttggacatcacccaagacagcaacactgctcccta |
22696999 |
T |
 |
| Q |
215 |
catcacctccattcgaaacttcaccaaaaacagcagcacact-aacaacacccccactccaacatcaccaaccgaaacatctccctt |
300 |
Q |
| |
|
|||||||||||||| |||||||||||||||||| ||| |||| ||||||||| ||||| ||||||||||| ||||||| |||||||| |
|
|
| T |
22697000 |
catcacctccattcaaaacttcaccaaaaacagtagctcactaaacaacaccaccacttcaacatcaccagccgaaacgtctccctt |
22697086 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 91 - 295
Target Start/End: Complemental strand, 34501420 - 34501223
Alignment:
| Q |
91 |
catcaccaacaaccaccaaaatcaccatcaactcaataaaccatgaccttagatctgagatcaccacatgcaaactgcatcaccaccacttggacatccc |
190 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||| |||||||||||| ||| |||||| ||| |||||||||| |||||||||||||| | |
|
|
| T |
34501420 |
catcaccaacaaccactaaaatcaccatcaactcaatataccatgaccttatatc-------accacacgcagactgcatcactaccacttggacatcac |
34501328 |
T |
 |
| Q |
191 |
ccaagacagcaacattactccctgcatcacctccattcgaaacttcaccaaaaacagcagcacactaacaacacccccactccaacatcaccaaccgaaa |
290 |
Q |
| |
|
|||||||||||||| |||||| |||||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
34501327 |
ccaagacagcaacaccactcccaacatcacctccattcgaaacttcaccaaaaatagtagcacactaacaacaccaccactccaacatcaccaaccgaaa |
34501228 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 34502799 - 34502715
Alignment:
| Q |
4 |
ccacacccttgagctcaccaccacacaagaaagagacagtaaacttcgcctcccaactcaacaccaacaaccgtcacttgtgata |
88 |
Q |
| |
|
||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |
|
|
| T |
34502799 |
ccacaccctcaaactcaccaccacagaagaaagagacagtaaacttcgcctcccaactcaacagcaacaaccaccacttgtgata |
34502715 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 136; Significance: 6e-71; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 48 - 300
Target Start/End: Original strand, 36934533 - 36934785
Alignment:
| Q |
48 |
ttcgcctcccaactcaacaccaacaaccgtcacttgtgatatccatcaccaacaaccaccaaaatcaccatcaactcaataaaccatgaccttagatctg |
147 |
Q |
| |
|
||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||| |||||| |
|
|
| T |
36934533 |
ttcgcctcccaactcaacaccaaacaccaccacttgtgatacccatcaccaacaaccaccaaaattaccatcaac--aataaaccatgaccttcgatctg |
36934630 |
T |
 |
| Q |
148 |
a-gatcaccacatgcaaactgcatcaccaccacttggacatcccccaagacagcaacattactccctgcatcacctccattcgaaacttcacc-aaaaac |
245 |
Q |
| |
|
| |||||||||| || |||||||||||||||||||||||| ||||||| |||| || |||||||||||||||||| |||||||||||||| |||||| |
|
|
| T |
36934631 |
aagatcaccacactcaggctgcatcaccaccacttggacatcacccaagatagcagcaccactccctgcatcacctcccttcgaaacttcaccaaaaaac |
36934730 |
T |
 |
| Q |
246 |
agcagcacactaacaacacccccactccaacatcaccaaccgaaacatctccctt |
300 |
Q |
| |
|
| |||| ||||||||||||| ||||||| ||||||||||||||||| | |||||| |
|
|
| T |
36934731 |
aacagcgcactaacaacaccaccactccgacatcaccaaccgaaacgtgtccctt |
36934785 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 129 - 300
Target Start/End: Complemental strand, 5888932 - 5888760
Alignment:
| Q |
129 |
aaccatgaccttagatctga-gatcaccacatgcaaactgcatcaccaccacttggacatcccccaagacagcaacattactccctgcatcacctccatt |
227 |
Q |
| |
|
||||| |||||||||| ||| |||||||||||||| ||| ||||||||||||||||||||| ||||||| ||||||| |||| |||| |||||||||| |
|
|
| T |
5888932 |
aaccacgaccttagatatgaagatcaccacatgcagactacatcaccaccacttggacatcacccaagatagcaacaccactctatgcagcacctccatt |
5888833 |
T |
 |
| Q |
228 |
cgaaacttcaccaaaaacagcagcacactaacaacacccccactccaacatcaccaaccgaaacatctccctt |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||| |
|
|
| T |
5888832 |
cgaaacttcaccaaaaacagcagcacactaacaacaccaacactccgacatcaccaaccgaaacgtctccctt |
5888760 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 133
Target Start/End: Complemental strand, 5892769 - 5892651
Alignment:
| Q |
17 |
ctcaccaccacacaagaaagagacagtaaac--ttcgcctcccaactcaacaccaacaaccgtcacttgtgatatccatcaccaacaaccaccaaaatca |
114 |
Q |
| |
|
||||| ||||||||||||||||||||| ||| |||||||||||||| |||||||| ||| ||||||||||| ||||||| ||| | ||||||||||| |
|
|
| T |
5892769 |
ctcacaaccacacaagaaagagacagtgaacatttcgcctcccaacttaacaccaaacaccaccacttgtgatacccatcactaacgaacaccaaaatca |
5892670 |
T |
 |
| Q |
115 |
ccatcaactcaataaacca |
133 |
Q |
| |
|
|||||||||||||| |||| |
|
|
| T |
5892669 |
ccatcaactcaatacacca |
5892651 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 122; Significance: 1e-62; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 94 - 287
Target Start/End: Complemental strand, 27631977 - 27631784
Alignment:
| Q |
94 |
caccaacaaccaccaaaatcaccatcaactcaataaaccatgaccttagatctgagatcaccacatgcaaactgcatcaccaccacttggacatccccca |
193 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||| ||||||||||| |||||||| |||| |
|
|
| T |
27631977 |
caccaacaaccaccaaaatcaccatcaactcaataaatcattaccttagatctgagatcaccacatgcagactacatcaccaccatgtggacatcaccca |
27631878 |
T |
 |
| Q |
194 |
agacagcaacattactccctgcatcacctccattcgaaacttcaccaaaaacagcagcacactaacaacacccccactccaacatcaccaaccg |
287 |
Q |
| |
|
||| ||| || |||||||||| ||||||||||| |||| |||||||||| |||||||||||||||||||| | ||||||||||||||||||| |
|
|
| T |
27631877 |
agatggcatcaccactccctgcaccacctccattcaaaacatcaccaaaaatagcagcacactaacaacaccactactccaacatcaccaaccg |
27631784 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 36607706 - 36607593
Alignment:
| Q |
4 |
ccacacccttgagctcaccaccacacaagaaagagacagtaaac--ttcgcctcccaactcaacaccaaca-accgtcacttgtgatatccatcaccaac |
100 |
Q |
| |
|
|||||||| || ||||| | ||||| ||||||||||| | ||| ||||||||||||||||||||||| | ||| |||| |||||| ||||||| ||| |
|
|
| T |
36607706 |
ccacacccccgaactcactatcacacgagaaagagacattgaacatttcgcctcccaactcaacaccaaaacaccaccactcgtgatacccatcactaac |
36607607 |
T |
 |
| Q |
101 |
aaccaccaaaatca |
114 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
36607606 |
aaccaccaaaatca |
36607593 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 27632018 - 27631967
Alignment:
| Q |
26 |
acacaagaaagagacagtaaac--ttcgcctcccaactcaacaccaacaacc |
75 |
Q |
| |
|
|||||||||||||||| | ||| |||||||||||||||||||||||||||| |
|
|
| T |
27632018 |
acacaagaaagagacaatgaacatttcgcctcccaactcaacaccaacaacc |
27631967 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 137
Target Start/End: Complemental strand, 32946746 - 32946613
Alignment:
| Q |
4 |
ccacacccttgagctcaccaccacacaagaaagagacagtaaacttcgcctcccaactcaacaccaacaaccgtcacttgtgatatccatcaccaacaac |
103 |
Q |
| |
|
|||||||| || ||||||||||||||||||||| | | | |||||||||||| |||||| |||||||| ||||||||||| |||||||||||| |
|
|
| T |
32946746 |
ccacacccacgaactcaccaccacacaagaaagacggtgaacatttcgcctcccaaatcaacatcaacaaccaccacttgtgatacatatcaccaacaac |
32946647 |
T |
 |
| Q |
104 |
caccaaaatcaccatcaactcaataaaccatgac |
137 |
Q |
| |
|
||||||||| ||||| |||||||||||||||||| |
|
|
| T |
32946646 |
caccaaaattaccattaactcaataaaccatgac |
32946613 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University