View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4139_high_21 (Length: 302)
Name: NF4139_high_21
Description: NF4139
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4139_high_21 |
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Alignment Details
Target: chr8 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 23 - 282
Target Start/End: Complemental strand, 7871687 - 7871428
Alignment:
| Q |
23 |
catcatcaatgatagggtgtaaaggacagcatnnnnnnntgatacataaaagagaggtaggcatgatacagtgaatctatgtgaaagatatataatatgg |
122 |
Q |
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| T |
7871687 |
catcttcaatgatagggtgtaaaggacagcataaaaaaatgatacataaaagagaggtaggcatgatacagtgaatctatgtgaaagatatataatatgg |
7871588 |
T |
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| Q |
123 |
ggtaatgtatattttcttggattcatgagttttttccctatgatttagttagtcatggttgtgttgaaatatgctgcatactggtgcagtatcttgtaat |
222 |
Q |
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| T |
7871587 |
ggtaatgtatattttcttggattcatgagttttttccctatgatttagttagtcatggttgtgttgaaatatgctgcatactggtgcagtatcttgtaat |
7871488 |
T |
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| Q |
223 |
tttggcagtagtggcattctttttacgcgtttttactttggtttacttgtgtgatgatgt |
282 |
Q |
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||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
7871487 |
tttggcagtagtggcattctttttatgcgtttttactttggtttacttgtgtgatgatgt |
7871428 |
T |
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