View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4140_low_9 (Length: 316)
Name: NF4140_low_9
Description: NF4140
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4140_low_9 |
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Alignment Details
Target: chr5 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 7069892 - 7070148
Alignment:
| Q |
1 |
ttggatattactatatcatggcttttagtctttaaaaataatgcacgcgtgacgtaggtacctttacaaaagataaataaaatacacgaatgctattgca |
100 |
Q |
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| T |
7069892 |
ttggatattactatatcatggcttttagtctttaaaaataatgcacgcgtgacgtaggtacctttacaaaagataaataaaatacaggaatgctattgga |
7069991 |
T |
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| Q |
101 |
aaggaatttctatatggttactcgtacaaaagcttcttggtgcaatacttaatacattaaataatcacctacgaagtttccaccaccttctagtaatgat |
200 |
Q |
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| T |
7069992 |
aaggaatttctatatggttagtcgtacaaaagcttcttggtgcaatacttaatacattaaataatcacctacgaagtttccaccaccttctagtaatgac |
7070091 |
T |
|
| Q |
201 |
tgattttcatcggagaacttataaagtatatgaggttggttctcttctatcaaccaa |
257 |
Q |
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| T |
7070092 |
tgattttaatcggaaaacttataaagtatatgaggtcggttctcttctttcaaccaa |
7070148 |
T |
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